dpe_297

AGTGGCTGATTGGAAGGGATCCCCGTGCCAAATAGAGCCAAAATTATCTTAGATCGAAGGTTCCTGGCTTACAGGGATTTGATGTAAGTTAAGAACCTCCGCTCTAAGCTAGTATGGCTATCATCAACGGCCCTGAAAGTACTACAAGTGTGTGCA *********************************(((((..((((.((((((.((.((((((.(((((((((.........))))))))).)))))).)).)))))).)))).)))))...********************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V111 male body	M042 female body	V050 head	V057 head	M021 embryo	V042 embryo
....................................................................................TAAGTTAAGAACCTCCGCTCT...................................................	21	0	1	473.00	473	459	10	3	1	0	0
....................................................................................TAAGTTAAGAACCTCCGCTCTA..................................................	22	0	1	137.00	137	125	8	3	1	0	0
....................................................................................TAAGTTAAGAACCTCCGCTC....................................................	20	0	1	81.00	81	80	0	1	0	0	0
....................................................................................TAAGTTAAGAACCTCCGCTCTAA.................................................	23	0	1	37.00	37	28	9	0	0	0	0
..................................................AGATCGAAGGTTCCTGGCTT......................................................................................	20	0	1	25.00	25	22	2	1	0	0	0
..................................................AGATCGAAGGTTCCTGGCTTAC....................................................................................	22	0	1	17.00	17	12	4	0	1	0	0
..................................................AGATCGAAGGTTCCTGGCTTACA...................................................................................	23	0	1	14.00	14	6	8	0	0	0	0
....................................................................................TAAGTTAAGAACCTCCGCTCTT..................................................	22	1	1	12.00	12	9	2	1	0	0	0
....................................................................................TAAGTTAAGAACCTCCGCTCTAT.................................................	23	1	1	10.00	10	9	1	0	0	0	0
..................................................AGATCGAAGGTTCCTGGCTTA.....................................................................................	21	0	1	9.00	9	6	3	0	0	0	0
....................................................................................TAAGTTAAGAACCTCCGCTCTTT.................................................	23	2	1	6.00	6	6	0	0	0	0	0
.....................................................................................AAGTTAAGAACCTCCGCTCT...................................................	20	0	1	5.00	5	5	0	0	0	0	0
.....................................................................................AAGTTAAGAACCTCCGCTCTA..................................................	21	0	1	3.00	3	2	1	0	0	0	0
..................................................AGATCGAAGGTTCCTGGCTTT.....................................................................................	21	1	1	3.00	3	3	0	0	0	0	0
.....................................................................................AAGTTAAGAACCTCCGCTCTAA.................................................	22	0	1	3.00	3	1	2	0	0	0	0
....................................................................................TAAGTTAGGAACCTCCGCTCTA..................................................	22	1	1	3.00	3	3	0	0	0	0	0
....................................................................................TAAGTTAAGAACCTCCGCT.....................................................	19	0	1	3.00	3	3	0	0	0	0	0
..................................................AGATCGAAGGTTCCTGGCT.......................................................................................	19	0	1	2.00	2	2	0	0	0	0	0
....................................................................................TAAGTTAAGAACCTCCGCTCTAAAA...............................................	25	2	1	2.00	2	0	0	0	0	2	0
..................................................AGATCGAAGGTCCCTGGCTTA.....................................................................................	21	1	1	2.00	2	2	0	0	0	0	0
....................................................................................TAAGTTAGGAACCTCCGCTCT...................................................	21	1	1	2.00	2	2	0	0	0	0	0
....................................................................................TAAGTTAAGATCCTCCGCTCTAT.................................................	23	2	1	2.00	2	2	0	0	0	0	0
....................................................ATCGAAGGTTCCTGGCTTAT....................................................................................	20	1	1	1.00	1	1	0	0	0	0	0
.....................................................................................AAGTTAAGAACCTCCGCTCTAT.................................................	22	1	1	1.00	1	0	1	0	0	0	0
....................................................................................CAAGTTAAGAACCTCCGCTCTAA.................................................	23	1	1	1.00	1	1	0	0	0	0	0
....................................................................................TAAGTTAAGAACCTCCACTC....................................................	20	1	1	1.00	1	1	0	0	0	0	0
...................................................GATCGAAGGTTCCTGGCTT......................................................................................	19	0	1	1.00	1	1	0	0	0	0	0
....................................................................................TAAGTTAGGAACCTCCGCTCTAA.................................................	23	1	1	1.00	1	0	1	0	0	0	0
....................................................................................GAAGTTAAGAACCTCCGCTCTAA.................................................	23	1	1	1.00	1	0	1	0	0	0	0
.....................................................................................AAGTTAAGAACCTCCGCTCTT..................................................	21	1	1	1.00	1	0	1	0	0	0	0
..................................................AGATCGAAGGTTCCGGGCTT......................................................................................	20	1	1	1.00	1	1	0	0	0	0	0
..................................................AGATCGAAGGTTCCTGGCTTACT...................................................................................	23	1	1	1.00	1	0	1	0	0	0	0
....................................................................................TAAGTTAAGAACCTCCGATCTAA.................................................	23	1	1	1.00	1	1	0	0	0	0	0
....................................................................................TAAGTTAAGAACCACCGATCAA..................................................	22	3	1	1.00	1	0	0	1	0	0	0
....................................................................................TAAGTTAAGAGCCTCCGCTCTA..................................................	22	1	1	1.00	1	1	0	0	0	0	0
..................................................ATATCGAAGGTTCCTGGCTT......................................................................................	20	1	1	1.00	1	1	0	0	0	0	0
...................................................GATCGAAGGTTCCTGGCTTA.....................................................................................	20	0	1	1.00	1	1	0	0	0	0	0
....................................................................................TAAGTTAGGAACCTCCCCTCT...................................................	21	2	1	1.00	1	0	0	1	0	0	0
....................................................................................TAAGTTAAGAACCTCAGCTCT...................................................	21	1	1	1.00	1	1	0	0	0	0	0
..................................................AGATCGAAGGTTCCTGGCTTATT...................................................................................	23	2	1	1.00	1	1	0	0	0	0	0
......................................................................................AGTTAAGAACCTCCGCTCTA..................................................	20	0	1	1.00	1	0	1	0	0	0	0
....................................................................................TAAGTAAAGAACCTCCGCTCT...................................................	21	1	1	1.00	1	1	0	0	0	0	0
....................................................................................TAAGTTAAGAACCTCCGCTCTAAA................................................	24	1	1	1.00	1	1	0	0	0	0	0
....................................................ATCGAAGGTTCCTGGCTTAC....................................................................................	20	0	1	1.00	1	1	0	0	0	0	0
.....................................................................................AAGTTAAGAACCTCCGCTC....................................................	19	0	1	1.00	1	0	1	0	0	0	0
.....................................................................TATTGGGATTTGATGTAAGT...................................................................	20	2	5	0.20	1	0	0	0	0	0	1
......................................................................ACAGGCATGTGTTGTAAGT...................................................................	19	3	20	0.05	1	0	1	0	0	0	0

TCACCGACTAACCTTCCCTAGGGGCACGGTTTATCTCGGTTTTAATAGAATCTAGCTTCCAAGGACCGAATGTCCCTAAACTACATTCAATTCTTGGAGGCGAGATTCGATCATACCGATAGTAGTTGCCGGGACTTTCATGATGTTCACACACGT ********************************(((((..((((.((((((.((.((((((.(((((((((.........))))))))).)))))).)).)))))).)))).)))))...*********************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V057 head	V042 embryo
.......TTAACCTCCCCTGGGGGCAC.................................................................................................................................	20	3	3	0.33	1	1	0
.........ATCCTTTCCTATGGGCACG................................................................................................................................	19	3	20	0.05	1	0	1

Species	Coordinate	ID	Type	Alignment
droPer2	scaffold_10:2200407-2200562 -	dpe_297	confident	AGTGGCT---------------------------------------------------GATTGGAA--------GGGA------------------------------------------T-CCCC-------GTGCCAAAT-----------AGAGCCAAAATTATCTTAGATCGAAGGTTCCTGGCTTACAG--GGATTTGATGTAAGTTAAGAACCTCCGCTCTAAGCTAGTATGGCTATCATC--AACG-GCCCTGAAAGTACTACAAGT-----------------------------GT--G-------TGCA
dp5	4_group4:3181481-3181636 -	dps-mir-964	Known_mirbase	AGTGGCT---------------------------------------------------GATTGGAA--------GGGA------------------------------------------T-CCCC-------GTGCCAAAT-----------AGAGCCAAAACTATCTTAGATCGAAGGTTCCTGGCTTACAG--GGATTTGATGTAAGTTAAGAACCTCCGCTCTAAGCTAGTATGGCTATCATC--AACG-GCCCTGAAAGTACTACAAGT-----------------------------GT--G-------TGCA
droWil2	scf2_1100000010706:453-559 +			CTGTGTC---------------------------------------------------AATTG------------------------------AAC---------------------------------------------------------AAAGTCAAAATTGTCTTAGAATAGGGGAGCTTAACTTATAT--TATTTTGCTTTAAGTTAAGAGCCTCAATTCTAAGATAATGCGACTATCACC------------------------------------------------------------------------
droBip1	scf7180000396572:743318-743435 +			AGTG-TT---------------------------------------------------CATCGGAA--------AGAA------------------------------------------T-CC--------------------ATCA-----AAAGTCACACTTGTTTTAGAATAGGGGAGCTTGACTTGTTAAAGAGTTGATATAAAGTTAAGATCCTTTATTCTAAGATAATGTGACCATTAT-------------------------------------------------------------------------
droKik1	scf7180000302389:430208-430280 -			A-----------------------------------------------------------------------------------------------------------------------------------------------------------GTCAGACTTGTCTTAGAATAGGGGAGCTTAACTTATGT--GGCAGATATTTAAGTTAAGAGCCTTAATTCTAAG-----------------------------------------------------------------------------------------
droEle1	scf7180000490753:31738-31824 +			------------------------------------------------------------------------------------------------------------------------------------------------------------GTCATACTTGCCTTAGAATAGGGGAGCTTGACTTATGT--GCGTTATGTTTAAGTTAAGAGCCTTAATTCTAAGATAATTCGACTATCA--------------------------------------------------------------------------
droRho1	scf7180000761061:170-278 +			--------------------------------------------------------------------------------------------------------------------------------------TGCCAAATTATTCAAGCCCAAGGTCATACTTGCCTTAGAATAGGGGAGCTTAACTTATGT--TCGTTGTGTTTAAGTTAAGAGCCTTGATTCTAAGATAATTCGACCATCA--------------------------------------------------------------------------
droBia1	scf7180000302422:3831818-3831904 +			------------------------------------------------------------------------------------------------------------------------------------------------------------GTCAAACTTGTCTTAGAATAGGGGAGCTTAACTTATGT--GTGCCGATTTTAAGTTAAGAGCCTTTTTTCTAAGATAATCCGACTATCA--------------------------------------------------------------------------
droTak1	scf7180000415871:386500-386615 +			------------------------------------------------------------------------------------------------------------------------------------------------------------GTCTAACTTGTCTTAGAATAGGGGAGCTTAACTTATGT--AGGTCATGTTTAAGTTAAGAGCCTTTTTTCTAAGATAATTCGACTATCGTAACAACGTGCTGATTGAGTATTATGAGT---------------------------------------------
dm3	chr2L:5641979-5642236 +	dme-mir-964	Known_mirbase	ACTAATTTTTCTTAGTCTAATCTAAAACAAGGTAAATATCAGGTTGTTTCCTGTATTCGATCGAAACATCTGTATATACCTTTGTTCCGATTGGACAAAAGTGCGTCTTCTAGTTGGTGAT-ACCA-------AT------------AACATATTGGTCCAACTTGCCTTAGAATAGGGGAGCTTAACTTATGT--TTTTGATGTTTAAGTTAAAAGCCTCTGTTCTAAGACAATTTGATGATCAAAA---CA-GCCGGAGAAATACTTCAT--------------------------ATAATGGTT---------ACA
droSim2	2l:5446778-5447000 +	dsi-mir-964	Known_mirbase	T--------------------------------------------------------------------CTGTATATACCTTTGATCCGGTTGGACAAAAGTGCATCTTCTAGTGGG-TAAATCCATGTGGTTATGACAAGTCAATCAAAATCTTGGTCCAACTTGCCTTAGAATAGGGGAGCTTAACTTGTGT--TTTTAATGTTTAAGTTAAAAGCCACTGTTCTAAGACAATTTGATGATCAAAAC---T---------------TCAACTTCATTTTGTAATACTTTGAAGATCATATTGGTTA-------AACA
droYak3	2L:13551044-13551248 -	dya_32	confident	ATTGGAT---------------------------------------------------GATCGAAACATCTGTATATACCTTTGTTCCGAATGGACGAAAGAGCATCTTCAAGT----TATATCCT-------ATGATCAATCAAT-GAAATCTTGGTCCCACTTGTCTTAGAATAGGGGAGCTTAACTTATGT--ATATCATGTATAAGTTAAGAACCTTTATTCTAAGACAATTCGACTACAAAAT---CA-ACTGAAAAACTACTTCAACT---------------------------------------------
droEre2	scaffold_4929:5730426-5730646 +	der_29	confident	ATTGGAT---------------------------------------------------GATCGAAACATCTGTATATACCTTTGTTCCGAATGGACGAAAGAGCATCTTCTAGTTGGTTACATCCTTGCGTTAGTGATCAATCAAT-AACGTTTTGGTCCCACTTGTCTTAGAATAGGGGAGCTTAACTTGTGT--GTGTTATGCTTAAGTTAAGAGCCTTTATTCTAAGTCAATTCGACTGCCAACTC---T---------------GCGC--------------------------ATTATGGTTACGAAGAATTCA

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droPer2

AGTGGCT---------------------------------------------------GATTGGAA--------GGGA------------------------------------------T-CCCC-------GTGCCAAAT-----------AGAGCCAAAATTATCTTAGATCGAAGGTTCCTGGCTTACAG--GGATTTGATGTAAGTTAAGAACCTCCGCTCTAAGCTAGTATGGCTATCATC--AACG-GCCCTGAAAGTACTACAAGT-----------------------------GT--G-------TGCA	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
..............................................................................................................................................................................................................TAAGTTAAGAACCTCCGCTCT............................................................................................	21	1	473.00	473	0	10	0	3	1	459
..............................................................................................................................................................................................................TAAGTTAAGAACCTCCGCTCTA...........................................................................................	22	1	137.00	137	0	8	0	3	1	125
..............................................................................................................................................................................................................TAAGTTAAGAACCTCCGCTC.............................................................................................	20	1	81.00	81	0	0	0	1	0	80
..............................................................................................................................................................................................................TAAGTTAAGAACCTCCGCTCTAA..........................................................................................	23	1	37.00	37	0	9	0	0	0	28
..........................................................................................................................................................................AGATCGAAGGTTCCTGGCTT.................................................................................................................................	20	1	25.00	25	0	2	0	1	0	22
..........................................................................................................................................................................AGATCGAAGGTTCCTGGCTTAC...............................................................................................................................	22	1	17.00	17	0	4	0	0	1	12
..........................................................................................................................................................................AGATCGAAGGTTCCTGGCTTACA..............................................................................................................................	23	1	14.00	14	0	8	0	0	0	6
..............................................................................................................................................................................................................TAAGTTAAGAACCTCCGCTCTT...........................................................................................	22	1	12.00	12	0	2	0	1	0	9
..............................................................................................................................................................................................................TAAGTTAAGAACCTCCGCTCTAT..........................................................................................	23	1	10.00	10	0	1	0	0	0	9
..........................................................................................................................................................................AGATCGAAGGTTCCTGGCTTA................................................................................................................................	21	1	9.00	9	0	3	0	0	0	6
..............................................................................................................................................................................................................TAAGTTAAGAACCTCCGCTCTTT..........................................................................................	23	1	6.00	6	0	0	0	0	0	6
...............................................................................................................................................................................................................AAGTTAAGAACCTCCGCTCT............................................................................................	20	1	5.00	5	0	0	0	0	0	5
...............................................................................................................................................................................................................AAGTTAAGAACCTCCGCTCTA...........................................................................................	21	1	3.00	3	0	1	0	0	0	2
..........................................................................................................................................................................AGATCGAAGGTTCCTGGCTTT................................................................................................................................	21	1	3.00	3	0	0	0	0	0	3
...............................................................................................................................................................................................................AAGTTAAGAACCTCCGCTCTAA..........................................................................................	22	1	3.00	3	0	2	0	0	0	1
..............................................................................................................................................................................................................TAAGTTAAGAACCTCCGCT..............................................................................................	19	1	3.00	3	0	0	0	0	0	3
..........................................................................................................................................................................AGATCGAAGGTTCCTGGCT..................................................................................................................................	19	1	2.00	2	0	0	0	0	0	2
..............................................................................................................................................................................................................TAAGTTAAGAACCTCCGCTCTAAAA........................................................................................	25	1	2.00	2	2	0	0	0	0	0
............................................................................................................................................................................ATCGAAGGTTCCTGGCTTAT...............................................................................................................................	20	1	1.00	1	0	0	0	0	0	1
...............................................................................................................................................................................................................AAGTTAAGAACCTCCGCTCTAT..........................................................................................	22	1	1.00	1	0	1	0	0	0	0
...........................................................................................................................................................................GATCGAAGGTTCCTGGCTT.................................................................................................................................	19	1	1.00	1	0	0	0	0	0	1
...............................................................................................................................................................................................................AAGTTAAGAACCTCCGCTCTT...........................................................................................	21	1	1.00	1	0	1	0	0	0	0
..........................................................................................................................................................................AGATCGAAGGTTCCTGGCTTACT..............................................................................................................................	23	1	1.00	1	0	1	0	0	0	0
...........................................................................................................................................................................GATCGAAGGTTCCTGGCTTA................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1
..........................................................................................................................................................................AGATCGAAGGTTCCTGGCTTATT..............................................................................................................................	23	1	1.00	1	0	0	0	0	0	1
................................................................................................................................................................................................................AGTTAAGAACCTCCGCTCTA...........................................................................................	20	1	1.00	1	0	1	0	0	0	0
..............................................................................................................................................................................................................TAAGTTAAGAACCTCCGCTCTAAA.........................................................................................	24	1	1.00	1	0	0	0	0	0	1
............................................................................................................................................................................ATCGAAGGTTCCTGGCTTAC...............................................................................................................................	20	1	1.00	1	0	0	0	0	0	1
...............................................................................................................................................................................................................AAGTTAAGAACCTCCGCTC.............................................................................................	19	1	1.00	1	0	1	0	0	0	0

dp5

AGTGGCT---------------------------------------------------GATTGGAA--------GGGA------------------------------------------T-CCCC-------GTGCCAAAT-----------AGAGCCAAAACTATCTTAGATCGAAGGTTCCTGGCTTACAG--GGATTTGATGTAAGTTAAGAACCTCCGCTCTAAGCTAGTATGGCTATCATC--AACG-GCCCTGAAAGTACTACAAGT-----------------------------GT--G-------TGCA	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
..............................................................................................................................................................................................................TAAGTTAAGAACCTCCGCTCTAA..........................................................................................	23	1	1757.00	1757	0	66	0	18	0	3	20	1	1649	0
..........................................................................................................................................................................AGATCGAAGGTTCCTGGCTTACA..............................................................................................................................	23	1	1061.00	1061	0	60	0	4	0	0	12	0	985	0
..............................................................................................................................................................................................................TAAGTTAAGAACCTCCGCTCTA...........................................................................................	22	1	936.00	936	3	59	0	15	1	26	108	0	723	1
..............................................................................................................................................................................................................TAAGTTAAGAACCTCCGCTCT............................................................................................	21	1	663.00	663	9	54	0	22	0	14	139	0	425	0
..........................................................................................................................................................................AGATCGAAGGTTCCTGGCTTAC...............................................................................................................................	22	1	612.00	612	1	45	0	4	0	3	34	0	524	1
..........................................................................................................................................................................AGATCGAAGGTTCCTGGCTTA................................................................................................................................	21	1	117.00	117	0	26	0	0	0	0	12	0	79	0
...............................................................................................................................................................................................................AAGTTAAGAACCTCCGCTCTAA..........................................................................................	22	1	108.00	108	0	11	0	0	0	0	0	0	97	0
..........................................................................................................................................................................AGATCGAAGGTTCCTGGCTT.................................................................................................................................	20	1	100.00	100	1	33	0	3	0	1	12	0	50	0
...............................................................................................................................................................................................................AAGTTAAGAACCTCCGCTCTA...........................................................................................	21	1	78.00	78	0	15	0	1	0	1	4	0	57	0
..............................................................................................................................................................................................................TAAGTTAAGAACCTCCGCTC.............................................................................................	20	1	63.00	63	0	5	1	0	0	3	14	0	40	0
..............................................................................................................................................................................................................TAAGTTAAGAACCTCCGCTCTAAA.........................................................................................	24	1	57.00	57	0	0	0	0	0	0	0	0	57	0
..............................................................................................................................................................................................................TAAGTTAAGAACCTCCGCTCTT...........................................................................................	22	1	50.00	50	0	3	0	1	0	1	5	0	40	0
..............................................................................................................................................................................................................TAAGTTAAGAACCTCCGCTCTAT..........................................................................................	23	1	33.00	33	0	0	0	0	0	0	0	0	33	0
..............................................................................................................................................................................................................TAAGTTAAGAACCTCCGCTCTAAT.........................................................................................	24	1	25.00	25	0	0	0	0	0	0	2	0	23	0
...........................................................................................................................................................................GATCGAAGGTTCCTGGCTTAC...............................................................................................................................	21	1	17.00	17	0	1	0	0	0	0	1	0	15	0
...........................................................................................................................................................................GATCGAAGGTTCCTGGCTTACA..............................................................................................................................	22	1	13.00	13	0	0	0	0	0	0	0	0	13	0
..............................................................................................................................................................................................................TAAGTTAAGAACCTCCGCTCTATT.........................................................................................	24	1	11.00	11	0	1	0	0	0	0	1	0	9	0
..........................................................................................................................................................................AGATCGAAGGTTCCTGGCTTT................................................................................................................................	21	1	11.00	11	0	2	0	0	0	0	0	0	9	0
............................................................................................................................................................................ATCGAAGGTTCCTGGCTTAC...............................................................................................................................	20	1	10.00	10	0	0	0	0	0	0	1	0	9	0
................................................................................................................................................................................................................AGTTAAGAACCTCCGCTCTA...........................................................................................	20	1	10.00	10	0	1	0	0	0	0	0	0	9	0
...............................................................................................................................................................................................................AAGTTAAGAACCTCCGCTCT............................................................................................	20	1	9.00	9	0	1	0	0	0	0	0	0	8	0
..............................................................................................................................................................................................................TAAGTTAAGAACCTCCGCTCC............................................................................................	21	1	9.00	9	0	0	0	8	0	0	0	0	1	0
..............................................................................................................................................................................................................TAAGTTAAGAACCTCCGCTCTAAG.........................................................................................	24	1	8.00	8	1	0	0	0	0	0	0	0	7	0
........................................................................................................................................................................TTAGATCGAAGGTTCCTGGC...................................................................................................................................	20	1	7.00	7	0	0	0	0	0	0	0	0	7	0
..............................................................................................................................................................................................................TAAGTTAAGAACCTCCGCTCTAATAA.......................................................................................	26	1	6.00	6	0	0	0	0	0	0	0	0	6	0
..............................................................................................................................................................................................................TAAGTTAAGAACCTCCGCTCTG...........................................................................................	22	1	6.00	6	0	0	0	0	0	0	0	0	6	0
..............................................................................................................................................................................................................TAAGTTAAGAACCTCCGCT..............................................................................................	19	1	6.00	6	0	0	0	0	0	0	1	0	5	0
..............................................................................................................................................................................................................TAAGTTAAGAACCTCCGCTCTTT..........................................................................................	23	1	6.00	6	0	0	0	0	0	1	1	0	4	0
..............................................................................................................................................................................................................TAAGTTAAGAACCTCCGCTCTAATT........................................................................................	25	1	6.00	6	0	0	0	0	0	1	0	0	5	0
...............................................................................................................................................................................GAAGGTTCCTGGCTTAC...............................................................................................................................	17	1	5.00	5	0	0	0	0	0	0	0	0	5	0
...............................................................................................................................................................................................................AAGTTAAGAACCTCCGCTCTT...........................................................................................	21	1	5.00	5	0	0	0	0	0	0	0	0	5	0
...............................................................................................................................................................................................................AAGTTAAGAACCTCCGCTCTAT..........................................................................................	22	1	5.00	5	0	0	0	0	0	0	1	0	4	0
..........................................................................................................................................................................AGATCGAAGGTTCCTGGCT..................................................................................................................................	19	1	4.00	4	0	1	0	1	0	0	0	0	2	0
................................................................................................................................................................................................................AGTTAAGAACCTCCGCTCTAA..........................................................................................	21	1	4.00	4	0	0	0	1	0	0	0	0	3	0
...............................................................................................................................................................................................................AAGTTAAGAACCTCCGCTCTAAG.........................................................................................	23	1	3.00	3	0	0	0	0	0	0	0	0	3	0
...............................................................................................................................................................................GAAGGTTCCTGGCTTACA..............................................................................................................................	18	1	3.00	3	0	0	0	0	0	0	0	0	3	0
............................................................................................................................................................................ATCGAAGGTTCCTGGCTTA................................................................................................................................	19	1	3.00	3	0	0	0	0	0	1	0	0	2	0
..................................................................................................................................................................................................................TTAAGAACCTCCGCTCTAA..........................................................................................	19	1	3.00	3	0	0	0	0	0	0	0	0	3	0
...........................................................................................................................................................................GATCGAAGGTTCCTGGCTT.................................................................................................................................	19	1	3.00	3	0	1	0	0	0	0	0	0	2	0
..............................................................................................................................................................................................................TAAGTTAAGAACCTCCGCTCTAACA........................................................................................	25	1	3.00	3	0	0	0	0	0	0	0	0	3	0
.........................................................................................................................................................................TAGATCGAAGGTTCCTGGCTTT................................................................................................................................	22	1	3.00	3	0	0	0	0	0	0	0	0	3	0
..............................................................................................................................................................................................................TAAGTTAAGAACCTCCGCTCTAAAA........................................................................................	25	1	3.00	3	0	0	0	0	0	0	0	0	3	0
........................................................................................................................................................................TTAGATCGAAGGTTCCTGGCTT.................................................................................................................................	22	1	3.00	3	0	0	0	0	0	0	0	0	3	0
..............................................................................................................................................................................................................TAAGTTAAGAACCTC..................................................................................................	15	1	2.00	2	0	0	0	0	0	0	0	0	2	0
...............................................................................................................................................................................................................AAGTTAAGAACCTCCGCTCTAAAA........................................................................................	24	1	2.00	2	0	0	0	0	0	0	0	0	2	0
...............................................................................................................................................................................................................AAGTTAAGAACCTCCGCTCTAAA.........................................................................................	23	1	2.00	2	0	0	0	0	0	0	0	0	2	0
...........................................................................................................................................AAT-----------AGAGCCAAAACTATCT......................................................................................................................................................	19	1	2.00	2	0	0	0	0	0	0	0	0	2	0
..............................................................................................................................................................................................................TAAGTTAAGAACCTCCGCTCTAC..........................................................................................	23	1	2.00	2	0	0	0	0	0	0	0	0	2	0
..............................................................................................................................................................................................................TAAGTTAAGAACCTCCGCTCTAAGAAT......................................................................................	27	1	2.00	2	0	0	0	0	0	0	0	0	2	0
...................................................................................................................................................................................................................TAAGAACCTCCGCTCTAA..........................................................................................	18	1	2.00	2	0	0	0	0	0	0	0	0	2	0
................................................................................................................................................................................................................AGTTAAGAACCTCCGCTCTAAA.........................................................................................	22	1	2.00	2	0	0	0	0	0	0	0	0	2	0
........................................................................................................................................................................TTAGATCGAAGGTTCCTGGCTTTT...............................................................................................................................	24	1	2.00	2	0	0	0	0	0	0	0	0	2	0
..............................................................................................................................................................................................................TAAGTTAAGAACCTCCGCTCTC...........................................................................................	22	1	1.00	1	0	0	0	0	0	1	0	0	0	0
.........................................................................................................................................................................TAGATCGAAGGTTCCTGGCTTA................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	1	0
..............................................................................................................................................................................................................TAAGTTAAGAACCTCC.................................................................................................	16	1	1.00	1	0	0	0	0	0	0	0	0	1	0
..............................................................................................................................................................................................................TAAGTTAAGAACCTCCGCTCCT...........................................................................................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0
..............................................................................................................................................................................................................TAAGTTAAGAACCTCCGCTCTACA.........................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	1	0
..........................................................................................................................................................................AGATCGAAGGTTCCTGGCTTAA...............................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	1	0
...............................................................................................................................................................................................................AAGTTAAGAACCTCCGCTC.............................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	1	0
..............................................................................................................................................................................................................TAAGTTAAGAACCTCCGCTCTAATAG.......................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	1	0
..........................................................................................................................................................................AGATCGAAGGTTCCTGGCTTACAA--...........................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	1	0
.................................................................................................................................................................................................................GTTAAGAACCTCCGCTCT............................................................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................GATCGAAGGTTCCTGGCTTA................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	1	0
..........................................................................................................................................................................AGATCGAAGGTTCCTGGCTTTT...............................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	1	0
...............................................................................................................................................................................GAAGGTTCCTGGCTTA................................................................................................................................	16	1	1.00	1	0	0	0	0	0	0	0	0	1	0
..........................................................................................................................................................................AGATCGAAGGTTCCTGGCTTACAC--...........................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	1	0	0	0
...........................................................................................................................................................................GATCGAAGGTTCCTGGCTTAT...............................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	1	0
..............................................................................................................................................................................................................TAAGTTAAGAACCTCCGCTCTATCA........................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	1	0
...............................................................................................................................................................................GAAGGTTCCTGGCTT.................................................................................................................................	15	1	1.00	1	0	0	0	0	0	0	0	0	1	0
..........................................................................................................................................................................AGATCGAAGGTTCCTGGCTTACAT--...........................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	1	0
..............................................................................................................................................................................................................TAAGTTAAGAACCTCCGCTCA............................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	1	0
..............................................................................................................................................................................................................TAAGTTAAGAACCTCCGCTCTAAC.........................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	1	0
..............................................................................................................................................................................................................TAAGTTAAGAACCTCCGC...............................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	1	0
...............................................................................................................................................................................................................AAGTTAAGAACCTCCGCTCTATT.........................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	1	0
..............................................................................................................................................................................................................TAAGTTAAGAACCTCCGCTCTGT..........................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	1	0
..............................................................................................................................................................................................................TAAGTTAAGAACCTCCGCTAA............................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	1	0
........................................................................................................................................................................TTAGATCGAAGGTTCCTGGCT..................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	1	0
..........................................................................................................................................................................AGATCGAAGGTTCCTGGCTTACC..............................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................TAGATCGAAGGTTCCTGGCTT.................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................AGTTAAGAACCTCCGCTC.............................................................................................	18	1	1.00	1	0	0	0	1	0	0	0	0	0	0
.........................................................................................................................................................................TAGATCGAAGGTTCCTGGCTTACA..............................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	1	0
............................................................................................................................................................................................................TGTAAGTTAAGAACCTCCGCTCTA...........................................................................................	24	1	1.00	1	0	0	0	0	0	0	1	0	0	0
..........................................................................................................................................................................AGATCGAAGGTTCCTGGCTTACT..............................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	1	0
................................................................................................................................................................................................................AGTTAAGAACCTCCGCTCTAAG.........................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................TAAGTTAAGAACCTCCGCTCTAATTA.......................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	1	0
..............................................................................................................................................................................................................TAAGTTAAGAACCTCCGCTCTATAA........................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	1	0
...............................................................................................................................................................................................................AAGTTAAGAACCTCCGCTCTAATAA.......................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	1	0
.................................................................................................................................................................................................................GTTAAGAACCTCCGCTCTAATAA.......................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	1	0
..........................................................................................................................................................................AGATCGAAGGTTCCTGGCTTC................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	1	0

droWil2

CTGTGTC---------------------------------------------------AATTG------------------------------AAC---------------------------------------------------------AAAGTCAAAATTGTCTTAGAATAGGGGAGCTTAACTTATAT--TATTTTGCTTTAAGTTAAGAGCCTCAATTCTAAGATAATGCGACTATCACC------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
..................................................................................................................................................................................................................TTAAGAGCCTCAATTCTAAGAT.......................................................................................	22	8	45.88	367	1	1	343	14	8
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACTT.................................................................................................................................	22	9	29.11	262	2	11	229	12	8
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACT..................................................................................................................................	21	9	25.56	230	3	9	199	5	14
...............................................................................................................................................................................................................AAGTTAAGAGCCTCAATTCTAA..........................................................................................	22	8	9.38	75	0	0	51	19	5
..................................................................................................................................................................................................................TTAAGAGCCTCAATTCTAAGA........................................................................................	21	8	8.88	71	0	0	70	0	1
.........................................................................................................................................................................TAGAATAGGGGAGCTTAACTT.................................................................................................................................	21	9	8.11	73	0	9	60	3	1
........................................................................................................................................................................TTAGAATAGGGGAGCTTAAC...................................................................................................................................	20	9	8.11	73	0	1	70	0	2
.........................................................................................................................................................................TAGAATAGGGGAGCTTAACT..................................................................................................................................	20	9	5.00	45	0	2	38	2	3
...................................................................................................................................................................................................................TAAGAGCCTCAATTCTAAGAT.......................................................................................	21	8	5.00	40	0	0	36	1	3
...............................................................................................................................................................................................................AAGTTAAGAGCCTCAATTCT............................................................................................	20	8	4.50	36	3	0	26	2	5
.........................................................................................................................................................................TAGAATAGGGGAGCTTAACTTA................................................................................................................................	22	9	4.00	36	0	2	26	8	0
.................................................................................................................................................................................................................GTTAAGAGCCTCAATTCTAAGA........................................................................................	22	8	3.63	29	0	0	27	1	1
...................................................................................................................................................................................................................TAAGAGCCTCAATTCTAAGATA......................................................................................	22	8	3.13	25	0	0	25	0	0
.........................................................................................................................................................................TAGAATAGGGGAGCTTAACTTAT...............................................................................................................................	23	9	3.00	27	0	0	24	1	2
...............................................................................................................................................................................................................AAGTTAAGAGCCTCAATTCTA...........................................................................................	21	8	2.50	20	0	0	17	3	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAAA...................................................................................................................................	20	9	2.00	18	0	0	18	0	0
...............................................................................................................................................................................................................AAGTTAAGAGCCTCAATTCTAAG.........................................................................................	23	8	1.88	15	0	0	13	0	2
........................................................................................................................................................................TTAGAATAGGGGAGCTTAA....................................................................................................................................	19	9	1.67	15	0	1	14	0	0
................................................................................................................................................................................................................AGTTAAGAGCCTCAATTCTAAG.........................................................................................	22	8	1.38	11	0	0	9	0	2
.................................................................................................................................................................................................................GTTAAGAGCCTCAATTCTAAG.........................................................................................	21	8	1.25	10	0	0	10	0	0
..................................................................................................................................................................................................................TTAAGAGCCTCAATTCTAAG.........................................................................................	20	8	1.25	10	0	0	10	0	0
.........................................................................................................................................................................TAGAATAGGGGAGCTTAACTTATA..............................................................................................................................	24	9	1.11	10	0	0	10	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAAAA..................................................................................................................................	21	10	1.10	11	0	1	9	1	0
...............................................................................................................................................................................................................AAGTTAAGAGCCTCAATTCTAAA.........................................................................................	23	8	1.00	8	0	0	5	3	0
..................................................................................................................................................................................................................TTAAGAGCCTCAATTCTAAGAA.......................................................................................	22	8	1.00	8	0	0	8	0	0
................................................................................................................................................................................................................AGTTAAGAGCCTCAATTCTAA..........................................................................................	21	8	1.00	8	0	0	3	2	3
........................................................................................................................................................................TTAGAATAGGGGAGCTTAAAAA.................................................................................................................................	22	11	0.91	10	0	0	10	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACA..................................................................................................................................	21	9	0.89	8	0	0	7	1	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACTTT................................................................................................................................	23	9	0.56	5	0	0	4	0	1
.........................................................................................................................................................................TAGAATAGGGGAGCTTAACTTT................................................................................................................................	22	9	0.56	5	0	0	5	0	0
.................................................................................................................................................................................................................GTTAAGAGCCTCAATTCTAAGAT.......................................................................................	23	8	0.50	4	0	0	4	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACC..................................................................................................................................	21	9	0.44	4	0	2	2	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTATT...................................................................................................................................	20	9	0.44	4	0	0	3	0	1
...................................................................................................................................................................................................................TAAGAGCCTCAATTCTAAGATC......................................................................................	22	8	0.38	3	0	0	3	0	0
...................................................................................................................................................................................................................TAAGAGCCTCAATTCTAAGA........................................................................................	20	8	0.38	3	0	0	2	0	1
..................................................................................................................................................................................................................TTAAGAGCCTCAATTCTAAGATC......................................................................................	23	8	0.38	3	0	1	2	0	0
.........................................................................................................................................................................TAGAATAGGGGAGCTTAACTTATAT--T..........................................................................................................................	26	9	0.33	3	0	0	3	0	0
..................................................................................................................................................................................................................TTAAGAGCCTCAATTCTAAGATA......................................................................................	23	8	0.25	2	0	0	2	0	0
................................................................................................................................................................................................................AGTTAAGAGCCTCAATTCTAAA.........................................................................................	22	8	0.25	2	0	0	1	1	0
.................................................................................................................................................................................................................GTTAAGAGCCTCAATTCTAA..........................................................................................	20	8	0.25	2	0	0	0	2	0
..................................................................................................................................................................................................................TTAAGAGCCTCAATTCTAAGATT......................................................................................	23	8	0.25	2	0	0	2	0	0
.......................................................................................................................................................................CTTAGAATAGGGGAGCTTAACT..................................................................................................................................	22	9	0.22	2	0	1	1	0	0
.........................................................................................................................................................................TAGAATAGGGGAGCTTAACTTAA...............................................................................................................................	23	9	0.22	2	0	0	1	1	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTA.....................................................................................................................................	18	9	0.22	2	0	1	0	1	0
..........................................................................................................................................................................AGAATAGGGGAGCTTAACTTA................................................................................................................................	21	9	0.22	2	0	0	2	0	0
....................................................................................................................................................................TGTCTTAGAATAGGGGAGCTTAAC...................................................................................................................................	24	9	0.22	2	0	2	0	0	0
..........................................................................................................................................................................AGAATAGGGGAGCTTAACTTAT...............................................................................................................................	22	9	0.22	2	0	0	1	1	0
......................................................................................................................................................................TCTTAGAATAGGGGAGCTTAACT..................................................................................................................................	23	9	0.22	2	0	0	2	0	0
.........................................................................................................................................................................TAGAATAGGGGAGCTTAACTA.................................................................................................................................	21	9	0.22	2	0	1	0	1	0
.............................................................................................................................................................TCAAAATTGTCTTAGAATAGGG............................................................................................................................................	22	5	0.20	1	0	0	0	1	0
.............................................................................................................................................................TCAAAATTGTCTTAGAATAGGGGAG.........................................................................................................................................	25	5	0.20	1	0	1	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTTT....................................................................................................................................	19	11	0.18	2	0	0	2	0	0
...........................................................................................................................................................................................................CTTTAAGTTAAGAGCCTCAATTCTAA..........................................................................................	26	7	0.14	1	0	0	1	0	0
.............................................................................................................................................................................................................TTAAGTTAAGAGCCTCAATTCTAAGA........................................................................................	26	7	0.14	1	0	0	0	1	0
...............................................................................................................................................................................................................AAGTTAAGAGCCTCAATTCTAT..........................................................................................	22	8	0.13	1	0	0	0	0	1
..................................................................................................................................................................................................................TTAAGAGCCTCAATTCTAAGATTT.....................................................................................	24	8	0.13	1	0	0	1	0	0
................................................................................................................................................................................................................AGTTAAGAGCCTCAATTCTA...........................................................................................	20	8	0.13	1	0	0	1	0	0
.................................................................................................................................................................................................................GTTAAGAGCCTCAATTCTAT..........................................................................................	20	8	0.13	1	0	0	1	0	0
.................................................................................................................................................................................................................GTTAAGAGCCTCAATTCTAAA.........................................................................................	21	8	0.13	1	0	0	0	1	0
.................................................................................................................................................................................................................GTTAAGAGCCTCAATTCTAAGT........................................................................................	22	8	0.13	1	0	0	1	0	0
...................................................................................................................................................................................................................TAAGAGCCTCAATTCTAAGAA.......................................................................................	21	8	0.13	1	0	0	0	1	0
.................................................................................................................................................................................................................GTTAAGAGCCTCAATTCTAAGAC.......................................................................................	23	8	0.13	1	0	0	1	0	0
...............................................................................................................................................................................................................AAGTTAAGAGCCTCAATTC.............................................................................................	19	8	0.13	1	0	0	1	0	0
.........................................................................................................................................................................TAGAATAGGGGAGCTTAACG..................................................................................................................................	20	9	0.11	1	1	0	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAT....................................................................................................................................	19	9	0.11	1	0	0	1	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACTTTCC..............................................................................................................................	25	9	0.11	1	0	0	1	0	0
....................................................................................................................................................................TGTCTTAGAATAGGGGAGCTTAAA...................................................................................................................................	24	9	0.11	1	0	1	0	0	0
.........................................................................................................................................................................TAGAATAGGGGAGCTTAAC...................................................................................................................................	19	9	0.11	1	0	0	0	1	0
...........................................................................................................................................................................GAATAGGGGAGCTTAACTTT................................................................................................................................	20	9	0.11	1	0	0	1	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACTA.................................................................................................................................	22	9	0.11	1	0	1	0	0	0
..........................................................................................................................................................................AGAATAGGGGAGCTTAACT..................................................................................................................................	19	9	0.11	1	0	0	1	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACAA.................................................................................................................................	22	9	0.11	1	0	0	1	0	0
......................................................................................................................................................................TCTTAGAATAGGGGAGCTTAAC...................................................................................................................................	22	9	0.11	1	0	1	0	0	0
.........................................................................................................................................................................TAGAATAGGGGAGCTTAAAA..................................................................................................................................	20	10	0.10	1	0	0	1	0	0
.........................................................................................................................................................................TAGAATAGGGGAGCTTAAAAA.................................................................................................................................	21	15	0.07	1	0	0	1	0	0

droBip1

AGTG-TT---------------------------------------------------CATCGGAA--------AGAA------------------------------------------T-CC--------------------ATCA-----AAAGTCACACTTGTTTTAGAATAGGGGAGCTTGACTTGTTAAAGAGTTGATATAAAGTTAAGATCCTTTATTCTAAGATAATGTGACCATTAT-------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droKik1

A-----------------------------------------------------------------------------------------------------------------------------------------------------------GTCAGACTTGTCTTAGAATAGGGGAGCTTAACTTATGT--GGCAGATATTTAAGTTAAGAGCCTTAATTCTAAG-----------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droEle1

------------------------------------------------------------------------------------------------------------------------------------------------------------GTCATACTTGCCTTAGAATAGGGGAGCTTGACTTATGT--GCGTTATGTTTAAGTTAAGAGCCTTAATTCTAAGATAATTCGACTATCA--------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droRho1

--------------------------------------------------------------------------------------------------------------------------------------TGCCAAATTATTCAAGCCCAAGGTCATACTTGCCTTAGAATAGGGGAGCTTAACTTATGT--TCGTTGTGTTTAAGTTAAGAGCCTTGATTCTAAGATAATTCGACCATCA--------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droBia1

------------------------------------------------------------------------------------------------------------------------------------------------------------GTCAAACTTGTCTTAGAATAGGGGAGCTTAACTTATGT--GTGCCGATTTTAAGTTAAGAGCCTTTTTTCTAAGATAATCCGACTATCA--------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droTak1

------------------------------------------------------------------------------------------------------------------------------------------------------------GTCTAACTTGTCTTAGAATAGGGGAGCTTAACTTATGT--AGGTCATGTTTAAGTTAAGAGCCTTTTTTCTAAGATAATTCGACTATCGTAACAACGTGCTGATTGAGTATTATGAGT---------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

dm3

ACTAATTTTTCTTAGTCTAATCTAAAACAAGGTAAATATCAGGTTGTTTCCTGTATTCGATCGAAACATCTGTATATACCTTTGTTCCGATTGGACAAAAGTGCGTCTTCTAGTTGGTGAT-ACCA-------AT------------AACATATTGGTCCAACTTGCCTTAGAATAGGGGAGCTTAACTTATGT--TTTTGATGTTTAAGTTAAAAGCCTCTGTTCTAAGACAATTTGATGATCAAAA---CA-GCCGGAGAAATACTTCAT--------------------------ATAATGGTT---------ACA	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACTT.................................................................................................................................	22	1	26149.00	26149	0	0	0	0	0	1	0	0	1	0	4	44	0	0	0	0	0	0	0	0	3	7	9	3753	0	0	0	0	1	0	0	0	0	0	0	13	26	16	12	8	6	22	19	10	9	17	36	14	5	14	10	30	14	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	10	7	7	5	0	14	1	14	12	0	0	0	4	2	14	2	1	181	0	5	151	1	1	19	42	21	25	0	0	9	3	13	16	5	192	13	2	1	92	0	1	0	0	0	0	0	0	1	0	0	0	1	2	0	0	0	0	0	0	1	0	0	2	1	1	2	0	0	28	69	219	58	91	168	17	28	36	15	0	0	0	0	0	0	0	8	4	0	5	2	5	0	5	0	0	3	12	7	4	1	1	4	5	6	0	0	0	9	3	2	1035	49	4222	32	35	0	3	1181	1	2824	71	0	0	0	0	1	22	50	0	3	1	0	0	3	3	5	3	82	351	10	331	145	170	245	437	183	59	406	243	5	0	0	0	0	0	0	0	5	4	0	2	0	1	0	0	0	34	0	0	54	0	0	0	0	0	0	0	0	0	1	0	0	0	0	2	0	1	0	0	0	0	175	909	36	169	21	138	20	106	1	1	1	0	0	2	10	1	2	10	24	154	6	0	11	25	57	30	79	337	2418	742	838	0	0	112	475	63	3	0	6	0	2	0	3	5	0	0	1	119	13	363	28	52	66	74	304	0	2	3	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACT..................................................................................................................................	21	1	16906.00	16906	0	0	0	0	0	1	0	0	0	0	0	4	0	0	0	0	0	0	0	0	2	2	11	2196	0	2	0	1	0	0	0	0	0	0	1	9	16	14	5	3	6	27	13	12	5	7	30	17	14	32	16	30	11	38	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	4	1	0	4	0	2	6	0	0	0	1	0	7	8	1	53	15	8	79	0	0	3	10	19	7	0	0	0	0	2	4	3	27	7	1	0	33	0	1	2	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	1	0	34	71	206	43	121	104	22	32	29	22	0	0	0	0	0	0	0	15	4	0	8	2	0	0	4	0	1	4	11	5	5	0	5	0	18	0	27	0	5	28	7	4	547	21	2532	26	21	0	0	550	2	1279	65	2	1	0	0	0	16	24	8	0	2	4	0	0	1	6	0	88	290	11	321	76	72	92	172	115	33	195	119	2	1	0	2	0	0	0	0	2	2	0	1	2	0	0	3	1	25	1	0	36	0	0	0	0	0	1	0	0	1	0	0	0	0	0	3	0	0	0	5	0	0	127	608	28	109	8	75	18	56	2	1	0	0	0	6	29	4	14	1	15	123	9	0	10	17	50	42	75	287	1884	408	617	0	0	119	514	65	0	0	6	0	0	0	0	5	1	0	0	140	18	415	80	50	79	56	259	0	2	3	2	0
.........................................................................................................................................................................TAGAATAGGGGAGCTTAACTT.................................................................................................................................	21	1	8794.00	8794	0	0	0	0	0	2	0	1	0	0	0	13	0	0	0	0	0	0	0	0	0	0	2	1679	0	0	0	0	0	0	0	0	0	0	0	2	2	2	0	1	0	3	0	0	1	1	8	3	1	3	4	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	4	0	0	0	2	0	14	0	0	106	2	1	71	0	0	4	15	0	4	0	0	18	0	5	12	0	65	2	0	2	37	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	13	19	11	8	37	0	4	7	0	0	0	0	0	0	0	0	5	1	0	0	0	0	0	2	0	0	0	5	1	2	0	2	0	1	0	0	0	0	3	0	1	430	12	1652	8	0	0	0	425	0	1048	19	0	0	0	0	0	0	4	0	0	0	0	0	0	1	0	0	13	63	2	65	10	10	38	54	11	6	20	13	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	14	0	0	19	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	64	533	17	72	7	63	3	30	0	0	0	0	0	0	1	0	0	1	3	77	2	0	2	4	7	4	10	158	456	339	413	0	0	9	96	22	0	1	1	0	1	0	0	0	0	0	0	52	1	124	4	5	9	10	31	0	0	0	0	0
..........................ACAAGGTAAATATCAGGTTGTTTC.............................................................................................................................................................................................................................................................................	24	1	6266.00	6266	0	0	1	0	0	5	0	0	0	0	1	54	0	0	0	0	0	0	0	0	0	0	1	7	0	0	0	0	0	0	0	0	0	0	0	3	12	3	2	1	9	6	27	2	6	2	12	2	3	4	18	9	5	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	8	6	10	1	9	0	1	2	0	0	1	3	2	19	0	1	437	3	7	157	0	0	6	13	12	15	1	0	41	1	8	28	4	182	3	0	1	54	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	17	17	5	20	35	1	5	2	5	0	0	0	0	0	0	0	0	0	0	0	2	5	0	5	0	0	0	19	1	6	0	0	0	2	1	0	0	0	2	0	0	342	10	618	2	0	0	0	57	0	546	0	0	0	0	0	0	2	11	0	0	0	0	0	0	0	0	1	44	214	0	9	94	66	177	542	172	30	212	137	0	0	0	0	0	0	0	0	0	1	0	2	0	0	1	2	1	266	0	3	146	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	59	359	2	27	11	39	0	19	0	0	0	1	0	0	0	0	0	3	4	18	1	0	0	6	12	2	5	44	231	44	32	0	0	1	44	7	0	0	0	0	0	0	0	0	0	0	0	9	2	98	4	7	12	12	45	0	3	4	0	0
.........................................................................................................................................................................TAGAATAGGGGAGCTTAACTTA................................................................................................................................	22	1	5545.00	5545	0	0	0	0	0	1	0	0	0	0	0	3	0	0	0	0	0	0	1	0	0	1	0	967	0	0	0	0	0	0	0	0	0	0	0	3	1	3	1	0	0	0	7	0	0	0	6	3	0	1	2	4	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	2	0	0	0	0	0	0	1	1	3	0	0	37	0	0	15	0	0	1	1	0	1	0	0	0	0	0	6	0	40	3	0	0	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	6	15	3	5	34	4	1	0	0	0	0	0	0	0	0	0	0	2	0	0	1	0	0	1	0	0	0	5	0	2	0	0	0	1	0	0	0	0	2	0	0	181	4	842	2	0	0	0	207	0	540	1	0	0	0	0	0	0	3	0	0	0	0	0	0	2	2	3	4	49	1	21	3	1	4	6	1	0	3	1	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	18	0	0	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	44	321	10	20	7	45	3	39	1	0	0	0	0	0	0	0	0	1	1	56	0	0	1	4	14	3	12	197	353	310	624	0	0	3	75	15	0	0	1	0	0	0	1	1	0	0	0	28	1	120	4	5	4	15	71	0	1	1	0	0
.........................................................................................................................................................................TAGAATAGGGGAGCTTAACT..................................................................................................................................	20	1	5261.00	5261	0	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0	0	0	0	0	1	779	0	0	0	0	0	0	0	0	0	0	0	5	3	5	2	0	1	6	1	2	0	1	5	3	2	4	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	7	0	0	0	0	0	0	1	0	2	0	0	42	1	2	20	0	0	1	4	4	2	0	0	3	0	1	5	0	17	0	1	0	10	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	8	21	9	15	30	0	6	10	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	1	0	0	0	2	0	1	0	0	0	2	0	0	0	0	11	0	0	246	5	907	4	1	0	0	232	0	418	4	0	0	0	0	0	4	1	0	0	0	0	0	0	0	0	0	26	39	1	85	3	1	10	26	1	1	14	4	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	8	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	59	410	11	52	7	63	4	20	0	0	0	0	0	0	3	0	0	0	2	57	0	1	6	2	10	4	17	100	491	182	223	0	0	1	122	25	0	0	4	0	0	0	0	0	0	0	0	32	1	129	10	13	11	14	45	0	1	0	0	0
..........................ACAAGGTAAATATCAGGTTGTTT..............................................................................................................................................................................................................................................................................	23	1	5016.00	5016	0	0	0	0	0	4	0	0	0	0	0	9	0	0	0	0	0	0	0	0	0	0	1	405	0	0	0	0	0	0	0	0	0	0	0	0	8	2	0	0	0	7	11	0	0	2	10	1	8	3	5	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	5	3	4	0	6	0	0	0	0	0	0	0	3	10	0	0	78	2	4	72	2	0	4	9	6	9	0	0	2	0	5	13	0	61	2	1	0	29	0	0	0	0	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	10	8	4	10	31	3	5	1	4	0	0	0	0	0	8	0	0	0	0	0	4	9	0	6	0	0	0	33	0	1	0	1	0	6	0	0	0	0	0	0	3	276	2	571	3	0	0	0	154	0	525	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	9	60	0	6	40	18	129	431	42	13	60	81	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	28	0	0	20	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	1	0	0	0	38	196	7	26	6	33	10	20	1	0	0	0	0	0	0	0	0	0	1	106	1	0	1	2	16	2	7	115	612	87	103	0	0	3	43	11	0	0	0	0	0	0	0	0	0	0	0	10	1	53	2	6	6	2	39	0	2	0	1	0
..........................ACAAGGTAAATATCAGGTTGTT...............................................................................................................................................................................................................................................................................	22	1	2059.00	2059	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	1	0	3	385	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	1	4	0	4	0	1	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	13	0	0	21	0	0	0	4	3	4	0	0	2	0	0	4	0	7	3	0	0	34	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	1	0	5	7	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	1	0	0	0	4	0	0	0	0	0	3	0	0	0	0	0	0	1	72	1	262	3	0	0	0	88	0	196	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	25	1	1	8	6	27	91	13	2	12	22	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	7	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	19	106	4	17	0	17	2	7	0	0	0	0	0	1	0	0	0	0	1	24	1	0	0	2	6	1	4	19	286	37	44	0	0	0	24	3	0	0	0	0	0	0	0	0	0	0	0	7	0	14	2	2	2	0	19	0	0	0	0	7
........................................................................................................................................................................TTAGAATAGGGGAGCTTAAC...................................................................................................................................	20	1	1842.00	1842	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	2	277	0	0	0	0	0	0	0	0	0	0	0	1	4	0	1	0	1	1	0	6	4	1	6	4	1	2	3	7	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	6	2	2	3	0	0	1	0	2	2	0	0	0	0	0	1	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	16	17	8	14	8	1	0	4	1	0	0	0	0	0	3	0	0	2	0	0	0	0	0	0	0	0	0	1	0	2	0	0	1	3	1	0	0	0	10	0	0	48	4	166	2	2	0	0	51	0	80	5	0	0	0	0	0	2	1	2	0	0	0	0	0	3	0	0	14	58	3	44	6	14	8	19	20	5	31	14	1	0	2	1	1	1	0	0	2	0	0	0	0	0	0	1	0	3	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	24	90	4	25	2	7	3	19	1	0	0	0	0	1	4	0	0	0	1	13	0	0	1	0	8	5	12	21	262	25	35	0	0	13	66	9	1	0	0	0	0	0	0	0	0	0	0	6	2	37	9	8	9	6	43	0	1	0	1	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACTTT................................................................................................................................	23	1	913.00	913	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	69	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	5	0	0	0	0	0	0	1	0	0	1	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	5	4	2	3	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	1	0	0	0	0	0	0	0	0	1	0	0	69	0	184	0	0	0	0	24	0	134	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	14	1	10	0	4	3	8	1	0	2	7	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	8	1	2	0	4	1	2	1	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	2	2	18	107	47	51	0	0	3	5	0	0	0	0	0	0	0	0	0	0	0	0	8	6	24	1	2	1	1	30	0	0	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAA....................................................................................................................................	19	1	665.00	665	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	131	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	0	0	0	1	2	0	2	4	1	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	1	3	0	0	0	1	0	0	0	0	0	0	0	0	1	2	1	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	2	8	2	4	2	0	3	1	2	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	2	0	0	0	0	0	0	0	18	4	95	2	0	0	0	20	0	26	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	2	15	0	6	1	3	2	4	3	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	25	1	3	1	2	0	1	1	0	0	0	0	1	2	0	1	0	0	3	0	0	0	2	2	0	4	4	102	16	18	0	0	3	12	6	0	0	0	0	0	0	0	0	0	0	0	2	1	5	2	3	0	1	31	0	0	0	0	0
.........................AACAAGGTAAATATCAGGTTGTTT..............................................................................................................................................................................................................................................................................	24	1	634.00	634	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	2	3	0	1	0	4	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	5	0	1	1	0	0	0	0	0	4	1	0	36	0	1	17	0	0	0	2	0	0	0	0	3	0	4	1	0	16	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	4	1	2	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	7	0	0	0	7	1	1	0	1	0	4	0	0	0	0	0	0	0	106	2	59	1	0	0	0	22	0	53	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	20	0	1	1	7	11	80	8	2	5	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	5	0	1	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	2	6	33	2	5	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	2	0	0	0	0	0
..........................ACAAGGTAAATATCAGGTTGT................................................................................................................................................................................................................................................................................	21	1	613.00	613	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	34	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	7	0	0	4	0	0	0	0	0	2	0	0	0	0	1	1	1	1	1	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	2	6	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	1	0	0	18	3	82	0	0	0	0	18	0	48	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	3	21	0	2	2	1	6	15	3	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	59	1	10	4	9	2	10	0	0	0	0	0	0	1	0	0	0	0	13	0	0	1	0	1	2	1	11	92	16	21	0	0	1	15	1	0	0	0	0	0	0	0	0	0	0	0	2	0	10	3	0	2	0	9	0	0	0	0	0
.........................AACAAGGTAAATATCAGGTTGTTTC.............................................................................................................................................................................................................................................................................	25	1	415.00	415	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	2	1	1	2	1	0	2	2	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	23	0	0	2	0	0	0	1	0	0	0	0	0	0	0	1	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	3	2	0	3	13	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	20	0	28	1	0	0	0	1	0	18	0	0	0	0	0	0	1	3	0	0	0	0	0	0	0	0	0	8	25	0	1	9	10	11	55	19	3	14	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	29	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	11	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	2	0	1	2	15	4	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	1	0	0	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTA.....................................................................................................................................	18	1	395.00	395	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	73	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	1	0	0	0	0	2	0	5	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	8	2	61	2	0	0	0	24	0	15	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	13	0	0	1	2	1	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	9	1	6	0	0	0	3	0	0	0	0	0	0	2	0	0	0	0	1	2	0	0	0	0	1	0	3	72	7	4	0	0	3	3	0	0	0	0	0	0	0	0	0	0	0	0	1	1	3	2	0	4	3	28	0	0	0	0	0
.........................................................................................................................................................................TAGAATAGGGGAGCTTAAC...................................................................................................................................	19	1	395.00	395	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	58	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	2	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	10	4	43	0	0	0	0	17	0	15	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	2	7	0	9	0	0	4	4	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	51	3	5	0	4	0	2	0	0	0	0	0	0	0	0	0	0	0	3	1	1	0	0	2	0	2	4	69	5	6	0	0	1	10	2	0	0	0	0	0	0	0	0	1	0	0	1	0	6	1	1	1	2	10	0	0	0	0	0
.........................AACAAGGTAAATATCAGGTTGTT...............................................................................................................................................................................................................................................................................	23	1	351.00	351	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	18	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	7	0	0	7	0	0	0	0	1	1	0	0	1	0	0	3	0	4	1	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	1	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	1	0	0	0	0	1	0	2	56	0	60	0	0	0	0	15	0	62	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	7	0	0	0	3	1	8	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	2	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	1	0	0	7	23	1	6	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	2	0	0	0	0	0	0	1	0
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.........................................................................................................................................................................TAGAATAGGGGAGCTTAACTTAA...............................................................................................................................	23	1	205.00	205	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	4	0	0	1	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	20	0	48	0	0	0	0	3	0	44	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	10	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	5	12	8	11	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	1	0	0	0	0	0
.................................................................................................................................................................................................................GTTAAAAGCCTCTGTTCTAAGA........................................................................................	22	1	198.00	198	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	5	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	1	0	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	1	13	6	7	27	6	4	26	35	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	12	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0
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.........................AACAAGGTAAATATCAGGTTGT................................................................................................................................................................................................................................................................................	22	1	127.00	127	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	11	0	13	0	0	0	0	12	0	15	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	12	1	1	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	2	14	1	3	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0
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..........................ACAAGGTAAATATCAGGTTGTTC..............................................................................................................................................................................................................................................................................	23	1	12.00	12	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACTG.................................................................................................................................	22	1	12.00	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................GTTAAAAGCCTCTGTTCTAA..........................................................................................	20	1	12.00	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	4	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................ACATCTGTATATACCTTTGTTC........................................................................................................................................................................................................................................	22	1	11.00	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................TTAAAAGCCTCTGTTCTAAGAT.......................................................................................	22	1	11.00	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................GTTAAAAGCCTCTGTTCTAAGT........................................................................................	22	1	10.00	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0

droSim2

T--------------------------------------------------------------------CTGTATATACCTTTGATCCGGTTGGACAAAAGTGCATCTTCTAGTGGG-TAAATCCATGTGGTTATGACAAGTCAATCAAAATCTTGGTCCAACTTGCCTTAGAATAGGGGAGCTTAACTTGTGT--TTTTAATGTTTAAGTTAAAAGCCACTGTTCTAAGACAATTTGATGATCAAAAC---T---------------TCAACTTCATTTTGTAATACTTTGAAGATCATATTGGTTA-------AACA	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACTT.................................................................................................................................	22	1	19654.00	19654	0	94	2	6	592	8	3	20	0	0	70	2	41	18816	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACT..................................................................................................................................	21	1	9383.00	9383	0	151	12	4	24	0	86	207	0	0	33	2	19	8845	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAAC...................................................................................................................................	20	1	995.00	995	0	15	0	0	227	3	7	25	0	0	2	0	3	713	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACTTT................................................................................................................................	23	1	437.00	437	0	15	0	1	0	0	1	0	0	0	0	0	0	420	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAA....................................................................................................................................	19	1	384.00	384	0	0	0	0	218	2	0	4	0	0	0	0	0	160	0	0	0
..................................................................................................................................................................................................................TTAAAAGCCACTGTTCTAAGAC.......................................................................................	22	1	341.00	341	4	250	25	0	46	1	5	6	0	0	2	1	0	1	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTA.....................................................................................................................................	18	1	66.00	66	0	0	0	0	61	1	0	1	0	0	2	0	0	1	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACA..................................................................................................................................	21	1	56.00	56	0	0	0	0	0	0	0	0	0	0	0	0	0	56	0	0	0
.........................................................................................................................................................................TAGAATAGGGGAGCTTAACTT.................................................................................................................................	21	1	52.00	52	0	0	0	0	10	1	0	0	0	0	1	0	0	40	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACTA.................................................................................................................................	22	1	49.00	49	0	2	0	0	0	0	0	0	0	0	1	0	0	46	0	0	0
.........................................................................................................................................................................TAGAATAGGGGAGCTTAACTTG................................................................................................................................	22	1	43.00	43	0	0	0	0	7	0	1	0	0	0	1	0	0	34	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAAA...................................................................................................................................	20	1	42.00	42	0	0	0	0	0	0	0	0	0	0	0	0	0	42	0	0	0
.................................................................................................................................................................................................................GTTAAAAGCCACTGTTCTAAGA........................................................................................	22	1	33.00	33	0	4	0	0	1	0	10	10	0	0	0	0	1	7	0	0	0
.........................................................................................................................................................................TAGAATAGGGGAGCTTAACT..................................................................................................................................	20	1	25.00	25	0	1	0	0	2	0	1	5	0	1	0	0	0	15	0	0	0
.................................................................................................................................................................................................................GTTAAAAGCCACTGTTCTAAG.........................................................................................	21	1	20.00	20	0	4	0	0	6	0	0	0	0	0	0	0	0	10	0	0	0
..................................................................................................................................................................................................................TTAAAAGCCACTGTTCTAAGA........................................................................................	21	1	19.00	19	0	3	1	0	5	0	2	3	0	0	0	1	0	4	0	0	0
.................................................................................................................................................................................................................GTTAAAAGCCACTGTTCTAAGAC.......................................................................................	23	1	16.00	16	0	0	0	0	16	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................TAAAAGCCACTGTTCTAAGAC.......................................................................................	21	1	12.00	12	0	10	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................TTAAAAGCCACTGTTCTAAG.........................................................................................	20	1	12.00	12	0	0	0	0	11	0	0	0	0	0	1	0	0	0	0	0	0
......................................................................................................................................................ATCTTGGTCCAACTTGCC.......................................................................................................................................................	18	1	11.00	11	0	5	3	0	2	0	0	0	0	0	1	0	0	0	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACTTA................................................................................................................................	23	1	10.00	10	0	0	0	0	0	0	0	0	0	0	0	0	0	10	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACC..................................................................................................................................	21	1	9.00	9	0	6	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0
.................................................................................................................................................................................................................GTTAAAAGCCACTGTTCTAA..........................................................................................	20	1	9.00	9	0	0	0	0	1	0	0	0	0	0	0	0	0	8	0	0	0
..................................................................................................................................................................................................................TTAAAAGCCACTGTTCTA...........................................................................................	18	1	8.00	8	0	0	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................TAGAATAGGGGAGCTTAA....................................................................................................................................	18	1	7.00	7	0	0	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................TAAAAGCCACTGTTCTAAGACA......................................................................................	22	1	6.00	6	0	3	0	0	2	0	0	0	0	0	0	0	0	1	0	0	0
..................................................................................................................................................................................................................TTAAAAGCCACTGTTCTAA..........................................................................................	19	1	6.00	6	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................GTTAAAAGCCACTGTTCTA...........................................................................................	19	1	6.00	6	0	0	0	0	5	0	0	0	0	0	0	0	0	1	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACTG.................................................................................................................................	22	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAAAA..................................................................................................................................	21	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0
.........................................................................................................................................................................TAGAATAGGGGAGCTTAAC...................................................................................................................................	19	1	5.00	5	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................TTAAAAGCCACTGTTCTAAGACA......................................................................................	23	1	4.00	4	0	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................GAATAGGGGAGCTTAACTT.................................................................................................................................	19	1	4.00	4	0	0	0	0	1	0	0	0	0	0	3	0	0	0	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTTT....................................................................................................................................	19	2	4.00	8	0	0	0	0	0	0	0	0	0	0	0	0	0	8	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACTAA................................................................................................................................	23	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTT.....................................................................................................................................	18	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACTTG................................................................................................................................	23	1	4.00	4	0	0	0	0	1	0	0	0	0	0	0	0	0	3	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAAT...................................................................................................................................	20	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACG..................................................................................................................................	21	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0
..................................................................................................................................................................................................................TTAAAAGCCACTGTTCTAAGACT......................................................................................	23	1	3.00	3	0	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................CTTAGAATAGGGGAGCTTAACT..................................................................................................................................	22	1	3.00	3	0	0	0	0	0	0	0	1	0	0	0	0	0	2	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACTTAA...............................................................................................................................	24	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACTC.................................................................................................................................	22	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACTTTA...............................................................................................................................	24	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACAA.................................................................................................................................	22	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0
.................................................................................................................................................................................................................GTTAAAAGCCACTGTTCT............................................................................................	18	1	3.00	3	0	0	0	0	2	0	0	0	0	0	1	0	0	0	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCT.......................................................................................................................................	16	1	3.00	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
...................................................................................................................................................................................................................TAAAAGCCACTGTTCTAAG.........................................................................................	19	1	2.00	2	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACTTAAA..............................................................................................................................	25	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0
..........................................................................................................................................................................AGAATAGGGGAGCTTAACTT.................................................................................................................................	20	1	2.00	2	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0
.................................................................................................................................................................................................................GTTAAAAGCCACTGTTCTAAGAA.......................................................................................	23	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0
..........................................................................................................................................................................AGAATAGGGGAGCTTAACT..................................................................................................................................	19	1	2.00	2	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0
.........................................................................................................................................................................TAGAATAGGGGAGCTTAACTTT................................................................................................................................	22	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACTAAA...............................................................................................................................	24	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0
...................................................................................................................................................................................................................TAAAAGCCACTGTTCTAAGA........................................................................................	20	1	2.00	2	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTT......................................................................................................................................	17	1	2.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACTTC................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
.........................................................................................................................................................................TAGAATAGGGGAGCTTAACG..................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................TTAAAAGCCACTGTTCTAAGAA.......................................................................................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................AGTTAAAAGCCACTGTTC.............................................................................................	18	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................TAGAATAGGGGAGCTTAACTTAA...............................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
..................................................................................................................................................................................................................TTAAAAGCCACTGTTCTAAGG........................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................TAAAAGCCACTGTTCTAAGACC......................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
..................................................................................................................................................................................................................TTAAAAGCCACTGTTCTAAGACC......................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACTTTAA..............................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
................................................................................................................................................................................................................AGTTAAAAGCCACTGTTCTAA..........................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
...................................................................................................................................................................................................................TAAAAGCCACTGTTCTAAGACT......................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACTTGGC..............................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
.............................................................................................................................................................................ATAGGGGAGCTTAAC...................................................................................................................................	15	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
................................................................................................................................................................................................................AGTTAAAAGCCACTGTTCTA...........................................................................................	20	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGC........................................................................................................................................	15	2	1.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACTTAGC..............................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACAGC................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
.......................................................................................................................................................................CTTAGAATAGGGGAGCTTAACTT.................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.........................................................................................................................................................................TAGAATAGGGGAGCTTAACTTGAA..............................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
..................................................................................................................................................................................................................TTAAAAGCCACTGTTCTAAGT........................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................AATCTTGGTCCAACTTGCC.......................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTTTA...................................................................................................................................	20	6	0.67	4	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAAAAA.................................................................................................................................	22	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0

droYak3

ATTGGAT---------------------------------------------------GATCGAAACATCTGTATATACCTTTGTTCCGAATGGACGAAAGAGCATCTTCAAGT----TATATCCT-------ATGATCAATCAAT-GAAATCTTGGTCCCACTTGTCTTAGAATAGGGGAGCTTAACTTATGT--ATATCATGTATAAGTTAAGAACCTTTATTCTAAGACAATTCGACTACAAAAT---CA-ACTGAAAAACTACTTCAACT---------------------------------------------	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACT..................................................................................................................................	21	1	518.00	518	20	9	5	0	4	12	465	0	0	3	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACTT.................................................................................................................................	22	1	448.00	448	11	16	10	1	2	5	400	2	0	1	0
.................................................................ACATCTGTATATACCTTTGTTCT.......................................................................................................................................................................................................................................	23	1	57.00	57	45	12	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAAC...................................................................................................................................	20	1	42.00	42	3	1	1	0	0	0	37	0	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACTTT................................................................................................................................	23	1	30.00	30	0	0	1	0	0	1	28	0	0	0	0
.........................................................................................................................................................................TAGAATAGGGGAGCTTAACTT.................................................................................................................................	21	1	17.00	17	0	1	0	0	0	3	13	0	0	0	0
.........................................................................................................................................................................TAGAATAGGGGAGCTTAACT..................................................................................................................................	20	1	17.00	17	2	1	0	0	0	0	14	0	0	0	0
.........................................................................................................................................................................TAGAATAGGGGAGCTTAACTTA................................................................................................................................	22	1	14.00	14	0	0	0	0	0	0	14	0	0	0	0
.................................................................ACATCTGTATATACCTTTGTTCC.......................................................................................................................................................................................................................................	23	1	12.00	12	9	2	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAA....................................................................................................................................	19	1	10.00	10	0	1	0	0	0	0	9	0	0	0	0
..........................................................................................................................................................................AGAATAGGGGAGCTTAACTTT................................................................................................................................	21	1	7.00	7	0	0	0	0	0	0	7	0	0	0	0
..........................................................................................................................................................................AGAATAGGGGAGCTTAACTT.................................................................................................................................	20	1	3.00	3	0	0	0	0	0	0	3	0	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACTC.................................................................................................................................	22	1	3.00	3	2	0	0	0	0	0	1	0	0	0	0
.................................................................ACATCTGTATATACCTTTGTTC........................................................................................................................................................................................................................................	22	1	3.00	3	0	3	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTA.....................................................................................................................................	18	1	3.00	3	1	0	0	0	0	2	0	0	0	0	0
.........................................................................................................................................................................TAGAATAGGGGAGCTTAACTTT................................................................................................................................	22	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0
....................................................................TCTGTATATACCTTTGTTCT.......................................................................................................................................................................................................................................	20	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................CTTAGAATAGGGGAGCTTAACTT.................................................................................................................................	23	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0
..........................................................................................................................................................................AGAATAGGGGAGCTTAACTTAT...............................................................................................................................	22	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACTTA................................................................................................................................	23	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0
..................................................................CATCTGTATATACCTTTGTTCCG......................................................................................................................................................................................................................................	23	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................GTTAAGAACCTTTATTCTAA..........................................................................................	20	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0
................................................................AACATCTGTATATACCTTTGTTCT.......................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACA..................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACTTTA...............................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.........................................................................................................................................................................TAGAATAGGGGAGCTTAACA..................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.................................................................ACATCTGTATATACCTTTGTTA........................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................GTTAAGAACCTTTATTCT............................................................................................	18	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................AGTTAAGAACCTTTATTCT............................................................................................	19	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0
.................................................................ACATCTGTATATACCTTTGTT.........................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................GAATAGGGGAGCTTAACTT.................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACTA.................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACTTC................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................AGAATAGGGGAGCTTAACT..................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACC..................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................T-GAAATCTTGGTCCCACTTGTC.......................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0

droEre2

ATTGGAT---------------------------------------------------GATCGAAACATCTGTATATACCTTTGTTCCGAATGGACGAAAGAGCATCTTCTAGTTGGTTACATCCTTGCGTTAGTGATCAATCAAT-AACGTTTTGGTCCCACTTGTCTTAGAATAGGGGAGCTTAACTTGTGT--GTGTTATGCTTAAGTTAAGAGCCTTTATTCTAAGTCAATTCGACTGCCAACTC---T---------------GCGC--------------------------ATTATGGTTACGAAGAATTCA	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACT..................................................................................................................................	21	1	2600.00	2600	12	2	21	1	2387	177	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACTT.................................................................................................................................	22	1	2242.00	2242	29	1	25	2	2018	167	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACTTT................................................................................................................................	23	1	361.00	361	0	0	3	0	337	21	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAAC...................................................................................................................................	20	1	275.00	275	0	0	0	0	264	11	0
.................................................................................................................................................................................................................GTTAAGAGCCTTTATTCTAAGT........................................................................................	22	1	142.00	142	1	1	1	0	134	5	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAA....................................................................................................................................	19	1	63.00	63	0	0	1	0	58	4	0
..................................................................................................................................................................................................................TTAAGAGCCTTTATTCTAAGT........................................................................................	21	1	42.00	42	0	0	0	0	39	3	0
.........................................................................................................................................................................TAGAATAGGGGAGCTTAACTT.................................................................................................................................	21	1	11.00	11	5	0	0	0	6	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACA..................................................................................................................................	21	1	8.00	8	0	0	0	0	7	1	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTA.....................................................................................................................................	18	1	7.00	7	0	0	0	0	6	1	0
.................................................................................................................................................................................................................GTTAAGAGCCTTTATTCTAA..........................................................................................	20	1	7.00	7	0	0	0	0	6	1	0
.........................................................................................................................................................................TAGAATAGGGGAGCTTAACT..................................................................................................................................	20	1	6.00	6	1	0	0	0	5	0	0
.................................................................ACATCTGTATATACCTTTGTTCT.......................................................................................................................................................................................................................................	23	1	6.00	6	2	0	1	0	2	1	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAAA...................................................................................................................................	20	1	5.00	5	0	0	0	0	5	0	0
..................................................................................................................................................................................................................TTAAGAGCCTTTATTCTAAGTT.......................................................................................	22	1	4.00	4	0	0	0	0	4	0	0
..................................................................................................................................................................................................................TTAAGAGCCTTTATTCTAAG.........................................................................................	20	1	4.00	4	0	0	0	0	3	1	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACTA.................................................................................................................................	22	1	3.00	3	0	0	0	0	3	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACTTA................................................................................................................................	23	1	3.00	3	0	0	0	0	2	1	0
.......................................................................................................................................................................CTTAGAATAGGGGAGCTTAACTT.................................................................................................................................	23	1	3.00	3	1	0	0	0	1	1	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAT....................................................................................................................................	19	1	3.00	3	0	0	0	0	3	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACTTC................................................................................................................................	23	1	2.00	2	0	0	0	0	2	0	0
..................................................................CATCTGTATATACCTTTGTTCCG......................................................................................................................................................................................................................................	23	1	2.00	2	0	0	1	0	1	0	0
..................................................................................................................................................................................................................TTAAGAGCCTTTATTCTAAGTA.......................................................................................	22	1	2.00	2	0	0	0	0	2	0	0
.................................................................................................................................................................................................................GTTAAGAGCCTTTATTCTAAGTT.......................................................................................	23	1	2.00	2	0	0	0	0	2	0	0
.................................................................................................................................................................................................................GTTAAGAGCCTTTATTCTAAGA........................................................................................	22	1	2.00	2	0	0	0	0	2	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTATT...................................................................................................................................	20	1	2.00	2	0	0	0	0	2	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACTTG................................................................................................................................	23	1	2.00	2	0	0	0	0	1	1	0
.................................................................ACATCTGTATATACCTTTGTTCC.......................................................................................................................................................................................................................................	23	1	2.00	2	0	1	0	0	0	1	0
.................................................................................................................................................................................................................GTTAAGAGCCTTTATTCTAAGC........................................................................................	22	1	2.00	2	0	0	0	0	2	0	0
.................................................................................................................................................................................................................GTTAAGAGCCTTTATTCTAAG.........................................................................................	21	1	1.00	1	0	0	0	0	1	0	0
................................................................AACATCTGTATATACCTTTGTT.........................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0
................................................................................................................................................................................................................AGTTAAGAGCCTTTATTCTAAG.........................................................................................	22	1	1.00	1	0	0	0	0	1	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTT.....................................................................................................................................	18	1	1.00	1	0	0	0	0	1	0	0
....................................................................................................................................................ACGTTTTGGTCCCACTTGTC.......................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACTTAA...............................................................................................................................	24	1	1.00	1	0	0	0	0	1	0	0
...................................................................................................................................................................................................................TAAGAGCCTTTATTCTAAGT........................................................................................	20	1	1.00	1	0	0	0	0	1	0	0
..............................................................................................................................................................................TAGGGGAGCTTAACTTGTGT--GTGTT......................................................................................................................	25	1	1.00	1	0	0	0	0	1	0	0
...................................................................................................................................................................................................................TAAGAGCCTTTATTCTAAGTTT......................................................................................	22	1	1.00	1	0	0	0	0	1	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACTC.................................................................................................................................	22	1	1.00	1	0	0	0	0	0	1	0
.....................................................................................................................................................CGTTTTGGTCCCACTTGTC.......................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	1	0
.................................................................ACATCTGTATATACCTTTGTTC........................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0
..........................................................................................................................................................................AGAATAGGGGAGCTTAACTT.................................................................................................................................	20	1	1.00	1	0	0	0	0	1	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAACTCT................................................................................................................................	23	1	1.00	1	0	0	0	0	1	0	0
...................................................................................................................................................AACGTTTTGGTCCCACTTGTC.......................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0	0
.........................................................................................................................................................................TAGAATAGGGGAGCTTAA....................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0	0
..................................................................CATCTGTATATACCTTTGTTCC.......................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	1	0	0
.................................................................ACATCTGTATATACCTTTG...........................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0	0
.........................................................................................................................................................................TAGAATAGGGGAGCTTAAC...................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0	0
........................................................................................................................................................................TTAGAATAGGGGAGCTTAAAA..................................................................................................................................	21	2	0.50	1	0	0	0	0	1	0	0

dpe_297

scaffold_10:2200457-2200512 -

Known Ortholog

Testes-restricted

antisense_to_intron

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads