ID:

dpe_285

 Coordinate:

scaffold_3913:1974-2056 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-33.6 -33.6 -33.5 -33.5

Flybase annnotation

intergenic

No Repeatable elements found

mature
  1. dpe_286  scaffold_371:10857-10879 -
  2. dpe_285  scaffold_3913:2017-2039 -
  3. dpe_288  scaffold_305:22152-22174 +
star
  1. scaffold_169:5815-5832 +
  2. scaffold_170:4204-4221 +
  3. scaffold_387:3991-4008 +
  4. scaffold_387:8871-8888 +
  5. scaffold_1114:6718-6735 +
  6. scaffold_43:138523-138540 +
  7. scaffold_650:5029-5046 +
  8. scaffold_1176:2941-2958 +
  9. dpe_285  scaffold_3913:1977-1994 -
  10. scaffold_4246:191-208 +
  11. scaffold_336:2351-2368 +
  12. scaffold_5672:649-666 +
  13. scaffold_8351:988-1005 +
  14. scaffold_8499:822-839 +
  15. scaffold_6162:437-454 +
  16. scaffold_8794:332-349 +
  17. scaffold_6203:806-823 +
  18. dpe_288  scaffold_305:22197-22214 +
  19. scaffold_7407:450-467 +
  20. scaffold_7556:1232-1249 +

Sense Strand Reads

CGGCCAACAATTAAAATCGACAACGCATCCTGGTGGCCGGACCAGCAGCCACTTGGATGCGGCCAATACTCGACTCGTTGGCATCACACCTCGATGCCAACGCAAACACATTGGACAATGCATCTCGGGTGGCCGGACCAGTGCCACTCGGTCTGCTGCACCAAACCAACAGACAGATGCAAC
****************************************************..((....((((..(((((((..((((((((((.......))))))))))......................)))))))...)).))....))************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V042
embryo
 V050
head
...................................................................ACTCGACTCGTTGGCATCACACC............................................................................................. 23 0 3 3.67 11 11 0 0 0
.........................................................TGCGGCCAATACTCGACTCGTTG....................................................................................................... 23 0 2 2.00 4 4 0 0 0
...................................................................ACTCGACTCGTTGGCATCACAC.............................................................................................. 22 0 3 2.00 6 6 0 0 0
.........................................................TGCGGCCAATACTCGACTCGTTGGCA.................................................................................................... 26 0 2 1.50 3 3 0 0 0
...................................................................ACTCGACTCGTTGGCATCACACCTC........................................................................................... 25 0 3 1.33 4 2 2 0 0
.....................................................................................................................................CGGACCAGTACTAATCGGT............................... 19 3 17 1.18 20 1 19 0 0
...................................................................ACTCGACTCGTTGGCATCAC................................................................................................ 20 0 3 1.00 3 1 2 0 0
...............................................................................................................TGGACAATGCATCTCGGGTGGCC................................................. 23 0 20 1.00 20 20 0 0 0
..................................................................TACTCGACTCGTTGGCATCACACCTC........................................................................................... 26 0 2 1.00 2 0 2 0 0
..................................................................TACTCGACTCGTTGGCATCACA............................................................................................... 22 0 2 1.00 2 2 0 0 0
...................................................................ACTCGACTCGTTGGCATCAA................................................................................................ 20 1 3 0.67 2 0 2 0 0
.....................................................................TCGACTCGTTGGCATCACACC............................................................................................. 21 0 3 0.67 2 2 0 0 0
...............................................................................................................TGGACAATGCATCTCGGGTGGCCG................................................ 24 0 20 0.60 12 12 0 0 0
...................................................CTTGGATGCGGCCAATACTT................................................................................................................ 20 1 2 0.50 1 1 0 0 0
...............................................GCCACTTGGATGCGGCCAATACTCGACT............................................................................................................ 28 0 2 0.50 1 1 0 0 0
..................................................................TACTCGACTCGTTGGCATCACACC............................................................................................. 24 0 2 0.50 1 1 0 0 0
..................................................................TACTCAACTCGTTGGCATCACC............................................................................................... 22 2 2 0.50 1 0 1 0 0
..................................................................TACTCGACTCGTTGGCATC.................................................................................................. 19 0 2 0.50 1 0 1 0 0
..................................................................TACTCGACTCGTTGGCATCACACCTCG.......................................................................................... 27 0 2 0.50 1 1 0 0 0
...............................................................CAATACTCGACTCGTTGGCATCACAC.............................................................................................. 26 0 2 0.50 1 1 0 0 0
.............AAATCGACAACGCATCCTGGTGGC.................................................................................................................................................. 24 0 20 0.40 8 8 0 0 0
...................................................................ACTCGACTCGTTGGCATCACA............................................................................................... 21 0 3 0.33 1 1 0 0 0
...................................................................ACTCGACTAGTTGGCATCACACCT............................................................................................ 24 1 3 0.33 1 1 0 0 0
...................................................................ACTCGACTGGTTGGCATCACAC.............................................................................................. 22 1 3 0.33 1 1 0 0 0
...................................................................ACTCGACTCGTTGGCATC.................................................................................................. 18 0 3 0.33 1 0 1 0 0
...................................................................ACTCGACTCGTTGGCATCACACCTCGA......................................................................................... 27 0 3 0.33 1 1 0 0 0
...................................................................ACTCGACTTGTTGGCATCACACCT............................................................................................ 24 1 3 0.33 1 1 0 0 0
.......................................................................................ACCTCGAGGCCAACGCAAACACA......................................................................... 23 1 3 0.33 1 1 0 0 0
...................................................................ACTCGACTAGTTGGCATCACACC............................................................................................. 23 1 3 0.33 1 1 0 0 0
...................................................................................TCACACCTCGATGCCAACGCAAACAC.......................................................................... 26 0 3 0.33 1 1 0 0 0
.....................................................................TCGACTCGTTGGCATCACACCTCGA......................................................................................... 25 0 3 0.33 1 1 0 0 0
................TCGACAACGCATCCTGGTGGCCGG............................................................................................................................................... 24 0 20 0.25 5 5 0 0 0
.....................................................................................................................................CGGACCAGTACTAATCGGTC.............................. 20 3 11 0.18 2 0 2 0 0
...........TAAAATCGACAACGCATCCTGG...................................................................................................................................................... 22 0 18 0.11 2 2 0 0 0
.................................TGGCCGGACCAGCAGCCACTTGGAA............................................................................................................................. 25 1 20 0.10 2 2 0 0 0
.............AAATCGACAACGCATCCTGGTGGCC................................................................................................................................................. 25 0 20 0.10 2 2 0 0 0
................TCGACAGTGCATCCTGGTGGC.................................................................................................................................................. 21 2 20 0.10 2 2 0 0 0
.............AAATCGACAACGCATCCTGGTGGCCGG............................................................................................................................................... 27 0 20 0.10 2 2 0 0 0
...................................................................................................................................................TCGGTCTGCTGCACCAAAAA................ 20 2 11 0.09 1 1 0 0 0
......................................................................................................................................GGACCAGTACTAATCGGTC.............................. 19 3 18 0.06 1 1 0 0 0
...........TAAAATCGACAACGCATCCTGGTGGCC................................................................................................................................................. 27 0 18 0.06 1 1 0 0 0
...........TAAAATCGACAACGCATCCTGGTGG................................................................................................................................................... 25 0 18 0.06 1 1 0 0 0
...CCAACAATTAAAATCGACAACGCAT........................................................................................................................................................... 25 0 19 0.05 1 1 0 0 0
....................................................................................................................AATGCATCTCGGGTGGCCGGAC............................................. 22 0 20 0.05 1 1 0 0 0
................................................................................................................GGACAATGCATCTCGGGT..................................................... 18 0 20 0.05 1 1 0 0 0
...............................................................................................................TGGACAATGCATCTCGGGTAT................................................... 21 2 20 0.05 1 1 0 0 0
.................................TGGCCGGACCAGCAGCCACTTGG............................................................................................................................... 23 0 20 0.05 1 1 0 0 0
.......................................................................................................................GCATCTCGGGTGGCCGGACCAGTG........................................ 24 0 20 0.05 1 1 0 0 0
..................................................................................................................ACAATGCATCTCGGGTGGC.................................................. 19 0 20 0.05 1 1 0 0 0
.......................CGCATCCTGGTGGCCGGA.............................................................................................................................................. 18 0 20 0.05 1 1 0 0 0
.............AAATCGACCACGCATCCTGGTGGC.................................................................................................................................................. 24 1 20 0.05 1 1 0 0 0
.............AAATCGACAACGCATCCTGGTGGCCG................................................................................................................................................ 26 0 20 0.05 1 1 0 0 0
............................................................................................................................TCGGGTGGCCGGACCAGTGCC...................................... 21 0 20 0.05 1 0 0 0 1
.............AAATCGACAACGCATCCTGGTGGCA................................................................................................................................................. 25 1 20 0.05 1 1 0 0 0
...............................................................................................................TGGACAATACATCTCGGGTGG................................................... 21 1 20 0.05 1 1 0 0 0
............ATAATCGACAATGCATGCT........................................................................................................................................................ 19 3 20 0.05 1 0 0 1 0
...............................................................................................................TGGACAATGCATCTCGTTGG.................................................... 20 3 20 0.05 1 1 0 0 0

Anti-sense strand reads

GCCGGTTGTTAATTTTAGCTGTTGCGTAGGACCACCGGCCTGGTCGTCGGTGAACCTACGCCGGTTATGAGCTGAGCAACCGTAGTGTGGAGCTACGGTTGCGTTTGTGTAACCTGTTACGTAGAGCCCACCGGCCTGGTCACGGTGAGCCAGACGACGTGGTTTGGTTGTCTGTCTACGTTG
**************************************..((....((((..(((((((..((((((((((.......))))))))))......................)))))))...)).))....))**************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V111
male body		 V042
embryo
 M021
embryo
 V057
head
...................................................GAACCTACGCCGGTTATGAGCTGAGC.......................................................................................................... 26 0 2 16.00 32 32 0 0 0 0
.....................................................ACCTACGCCGGTTATGAGCTGAGC.......................................................................................................... 24 0 2 9.00 18 18 0 0 0 0
................................................................................................GGTTGCGTTTGTGTAACCTGTTACG.............................................................. 25 0 3 8.67 26 26 0 0 0 0
.................................................................................................GTTGCGTTTGTGTAACCTGTTACG.............................................................. 24 0 3 7.33 22 22 0 0 0 0
......................................................CCTACGCCGGTTATGAGCTGAGC.......................................................................................................... 23 0 2 6.50 13 13 0 0 0 0
...................................................................................................TGCGTTTGTGTAACCTGTTACG.............................................................. 22 0 3 6.00 18 18 0 0 0 0
.....................................................ACCTACGCCGGTTATGAGCTGAG........................................................................................................... 23 0 2 4.50 9 9 0 0 0 0
...................................................GAACCTACGCCGGTTATGAGCTGAG........................................................................................................... 25 0 2 3.00 6 6 0 0 0 0
....................................................AACCTACGCCGGTTATGAGCTGAGC.......................................................................................................... 25 0 2 3.00 6 6 0 0 0 0
.......................................................CTACGCCGGTTATGAGCTGAGC.......................................................................................................... 22 0 2 2.50 5 5 0 0 0 0
......................................................CCTACGCCGGTTATGAGCTGAG........................................................................................................... 22 0 2 2.00 4 4 0 0 0 0
.......................................................................................................................................................AGACGACGTGGTTTGGTTGTCTGT........ 24 0 10 1.60 16 12 0 4 0 0
...............................................................................................CGGTTGCGTTTGTGTAACCTGTTACG.............................................................. 26 0 3 1.33 4 4 0 0 0 0
.................................................................................................................................................TGAGCCAGACGACGTGGTTTGGTTGT............ 26 0 10 1.10 11 11 0 0 0 0
...................................................................................................................................................AGCCAGACGACGTGGTTTGGTTGT............ 24 0 10 1.00 10 10 0 0 0 0
......................................................................................GTGGAGCTACGGTTGCGTTTGTGT......................................................................... 24 0 3 1.00 3 3 0 0 0 0
.............................................................................................TACGGTTGCGTTTGTGTAACCTGTTACG.............................................................. 28 0 3 1.00 3 3 0 0 0 0
..................................................................................................................................................GAGCCAGACGACGTGGTTTGGTTGT............ 25 0 10 1.00 10 10 0 0 0 0
..................................................TGAACCTACGCCGGTTATGAGCTGAGC.......................................................................................................... 27 0 2 1.00 2 2 0 0 0 0
..........................................................................................................................................................CGACGTGGTTTGGTTGTCTGTCTAC.... 25 0 10 0.90 9 9 0 0 0 0
......................TGCGTAGGACCACCGGCCTGGTCGT........................................................................................................................................ 25 0 20 0.85 17 17 0 0 0 0
..............................................................................................ACGGTTGCGTTTGTGTAACCTGTTACG.............................................................. 27 0 3 0.67 2 2 0 0 0 0
...................................................................TGAGCTGAGCAACCGTAGTGT............................................................................................... 21 0 3 0.67 2 1 1 0 0 0
.....................................................................................TGTGGAGCTACGGTTGCGTTT............................................................................. 21 0 3 0.67 2 0 2 0 0 0
................................................................................................GGTTGCGTTTGTGTAAGCTGTTACG.............................................................. 25 1 3 0.67 2 2 0 0 0 0
.........................................................................................................................................................ACGACGTGGTTTGGTTGTCTGT........ 22 0 10 0.60 6 6 0 0 0 0
...............................................CGGTGAACCTACGCCGGTTATGAGC............................................................................................................... 25 0 2 0.50 1 1 0 0 0 0
.......................................................CTACGCCGGTTATGAGCTGAGCA......................................................................................................... 23 0 2 0.50 1 1 0 0 0 0
....................................................AACCTACGCCGGTTATGAGCTGAG........................................................................................................... 24 0 2 0.50 1 1 0 0 0 0
.....................................................ACCTACGCCGGTTATGAGCTGA............................................................................................................ 22 0 2 0.50 1 1 0 0 0 0
..................................................................ATGAGCTGAGCAACCGTAGTGTGGAG........................................................................................... 26 0 2 0.50 1 1 0 0 0 0
.......................................................CTACGCCGGTTATGAGCTGAGCAA........................................................................................................ 24 0 2 0.50 1 1 0 0 0 0
....................................................AACCTACGCCGGTTATGAGCTGA............................................................................................................ 23 0 2 0.50 1 1 0 0 0 0
......................................................CCTACGCCGGTTATGAGCTGA............................................................................................................ 21 0 2 0.50 1 1 0 0 0 0
...................................................GAACCTACGCCGGTTATGAGCTGA............................................................................................................ 24 0 2 0.50 1 1 0 0 0 0
....................................................AACCTACGCCGGTTATCAGCTGAGC.......................................................................................................... 25 1 2 0.50 1 1 0 0 0 0
.......................................................AACCGCCGGTTATGAGCTGAGC.......................................................................................................... 22 3 2 0.50 1 0 0 1 0 0
.....................................................ACCTACGCCGGTTAGGAGCTGAG........................................................................................................... 23 1 2 0.50 1 1 0 0 0 0
........................................................TACGCCGGTTATGAGCTGAGC.......................................................................................................... 21 0 2 0.50 1 1 0 0 0 0
.......................................................CTACGCCGGTTATGAGCTGAG........................................................................................................... 21 0 2 0.50 1 1 0 0 0 0
...................................................AAACCTACGCCGGTTATGAGCTGAG........................................................................................................... 25 1 2 0.50 1 1 0 0 0 0
.................................................................TATGAGCTGAGCAACCGTAGTGTGG............................................................................................. 25 0 2 0.50 1 1 0 0 0 0
......................................................CCTACGCCGGTTATGAGCTGAGCAAC....................................................................................................... 26 0 2 0.50 1 1 0 0 0 0
.....................TTGCGTAGGACCACCGGCCTGGTCGT........................................................................................................................................ 26 0 20 0.45 9 9 0 0 0 0
..........................................................................................................................................................CGACGTGGTTTGGTTGTCTGT........ 21 0 10 0.40 4 4 0 0 0 0
...................................................................................................TGCGTTTGTGTAAACTGTTACG.............................................................. 22 1 3 0.33 1 1 0 0 0 0
..........................................................................................AGCTACGGTTGCGTTTGTGTAACCTGT.................................................................. 27 0 3 0.33 1 1 0 0 0 0
....................................................................................GTGTGGAGCTACGGTTGCGTTTGT........................................................................... 24 0 3 0.33 1 1 0 0 0 0
..............................................................................................................AACCTGTTACGTAGAGCCCACCGGCCT.............................................. 27 0 3 0.33 1 1 0 0 0 0
.................................................................................................GTAGCGTTTGTGTAAGCTGTTACG.............................................................. 24 2 3 0.33 1 1 0 0 0 0
................................................................................................GGTTGCGTTTGTGTAATCTGTTACG.............................................................. 25 1 3 0.33 1 1 0 0 0 0
.................................................................................................GTTGCGTTTGTGTAACCTGTTAC............................................................... 23 0 3 0.33 1 1 0 0 0 0
.......................................................................................TGGAGCTACGGTTGCGTTTGT........................................................................... 21 0 3 0.33 1 1 0 0 0 0
....................................................................GAGCTGAGCAACCGTAGTGTG.............................................................................................. 21 0 3 0.33 1 1 0 0 0 0
..................................................................................................ATGCGTTTGTGTAACCTGT.................................................................. 19 1 3 0.33 1 1 0 0 0 0
................................................................................................GGTGGCGTTTGTGTAACCTGTTACG.............................................................. 25 1 3 0.33 1 1 0 0 0 0
........................................................................................GGAGCTACGGTTGCGTTTGTGTAA....................................................................... 24 0 3 0.33 1 1 0 0 0 0
.................................................................................GTAGTGTGGAGCTACGGTTGCGT............................................................................... 23 0 3 0.33 1 1 0 0 0 0
..................................................................................................TTGCGTTTGTGTAACCTGTTACG.............................................................. 23 0 3 0.33 1 1 0 0 0 0
...............................................................................................CGGTTACGTTTGTGTAACCTGTTAC............................................................... 25 1 3 0.33 1 1 0 0 0 0
...............................................................................................CGGTTGCGTTTGTGTACCCTGTTAC............................................................... 25 1 3 0.33 1 1 0 0 0 0
....................................................................................GTGTGGAGCTACGGTTGCGT............................................................................... 20 0 3 0.33 1 0 1 0 0 0
.............................................................................................TACGTTTGCGTTTGTGTAACCTGTTACG.............................................................. 28 1 3 0.33 1 1 0 0 0 0
....................................................................GAGCTGAGCAACCGTAGTGTGGAGC.......................................................................................... 25 0 3 0.33 1 1 0 0 0 0
...................................................................TGAGCTGAGCAACCGTAGTGTGGAG........................................................................................... 25 0 3 0.33 1 0 1 0 0 0
..................CTGTTGCGTAGGACCACCGGCCT.............................................................................................................................................. 23 0 20 0.30 6 4 0 2 0 0
....................GTTGCGTAGGACCACCGGCCTGGTCG......................................................................................................................................... 26 0 20 0.30 6 6 0 0 0 0
.............................................................................................................................................................CGTGGTTTGGTTGTCTGTCTAC.... 22 0 10 0.30 3 3 0 0 0 0
..............................................................................................................................................................GTGGTTTGGTTGTCTGTCTACGT.. 23 0 10 0.30 3 1 0 0 2 0
....................GTTGCGTAGGACCACCGGCCTGG............................................................................................................................................ 23 0 20 0.25 5 5 0 0 0 0
.......................GCGTAGGACCACCGGCCTGGTCGT........................................................................................................................................ 24 0 20 0.25 5 3 0 2 0 0
......................TGCGTAGGACCACCGGCCTGGT........................................................................................................................................... 22 0 20 0.25 5 5 0 0 0 0
...................TGTTGCGTAGGACCACCGGCCT.............................................................................................................................................. 22 0 20 0.20 4 4 0 0 0 0
.........................GTAGGACCACCGGCCTGGTCG......................................................................................................................................... 21 0 20 0.20 4 4 0 0 0 0
........................................................................................................................................................GACGACGTGGTTTGGTTGTCTGT........ 23 0 10 0.20 2 2 0 0 0 0
..........................................................................................................................................................TGACGTGGTTTGGTTGTCTGT........ 21 1 10 0.20 2 2 0 0 0 0
...................................................................................................................GTTACGTAGAGCCCACCGGCCTGGT........................................... 25 0 20 0.20 4 4 0 0 0 0
.................................................................................GTAGTGTGGAGCTACGGTTG.................................................................................. 20 0 5 0.20 1 0 1 0 0 0
................................................................................CGTAGTGTGGAGCTACGGTTG.................................................................................. 21 0 5 0.20 1 0 1 0 0 0
...........................................................................................................................................................GACGTGGTTTGGTTGTCTGTCTACG... 25 0 10 0.20 2 2 0 0 0 0
...........................................................................................................................................................GACGTGGTTTGGTTGTCTGTCTAC.... 24 0 10 0.20 2 2 0 0 0 0
.................................................................................GTAGTGTGGAGCAACGGGTG.................................................................................. 20 2 6 0.17 1 0 0 0 0 1
..CGGTTGTTAATTTTAGCTGTT................................................................................................................................................................ 21 0 19 0.16 3 2 0 0 1 0
GCCGGTTGTTAATTTTAGCTGTTGCG............................................................................................................................................................. 26 0 19 0.16 3 1 0 0 2 0
.....................TTGCGTAGGACCACCGGCCTGGTCG......................................................................................................................................... 25 0 20 0.15 3 3 0 0 0 0
..............TTAGCTGTTGCGTAGGACCACCGGCCT.............................................................................................................................................. 27 0 20 0.15 3 3 0 0 0 0
............................GGACCACCGGCCTGGTCGTCGGT.................................................................................................................................... 23 0 20 0.15 3 3 0 0 0 0
.........................TTAGGACCACCGGCCTGGTCGT........................................................................................................................................ 22 1 20 0.15 3 3 0 0 0 0
..................................................................................................................TGTTACGTAGAGCCCACCGGCCTGGT........................................... 26 0 20 0.15 3 3 0 0 0 0
....................ATTGCGTAGGACCACCGGCCTGGT........................................................................................................................................... 24 1 20 0.15 3 3 0 0 0 0
GCCGGTTGTTAATTTTAGCTGTTGCGT............................................................................................................................................................ 27 0 19 0.11 2 2 0 0 0 0
..............................................................................................................................................................GTGGTTTGGTTGTCTGTCTA..... 20 0 10 0.10 1 1 0 0 0 0
.......................................................................................................................................................TGTCGACGTGGTTTGGTTGTCTGT........ 24 2 10 0.10 1 0 0 1 0 0
..............................................................................................................................................................GTGGTTTGGTTGTCTGGCTACGTTG 25 1 10 0.10 1 1 0 0 0 0
................................................................................................................................................TGAAGCCAGACGACGTGGTTTGGTT.............. 25 3 10 0.10 1 1 0 0 0 0
...................................................................................................................................................AGCCAGACGACGTGGTTTGGTTG............. 23 0 10 0.10 1 1 0 0 0 0
....................................................................................................................................................GCCAGACGACGTGGTTTGGTTGT............ 23 0 10 0.10 1 1 0 0 0 0
...............................................................................................................................................................TGGTTTGGTTGTCTGTCTACG... 21 0 10 0.10 1 1 0 0 0 0
.............................................................................................................................................................CGTGGTTTGGTTGTCTGTCTA..... 21 0 10 0.10 1 1 0 0 0 0
...................................................................................................................................................AGCCAGACGACGTGGTTTGG................ 20 0 10 0.10 1 1 0 0 0 0
...........................................................................................................................................................GACGTGGTTTGGTTGTCTGT........ 20 0 10 0.10 1 1 0 0 0 0
................................................................................................................................................GTGAGCCAGACGACGTGGTTGGGTTGT............ 27 1 10 0.10 1 1 0 0 0 0
..........................................................................................................................................................CGACGTGGTTTGGTTGTCTG......... 20 0 10 0.10 1 0 0 1 0 0
..............................................................................................................................................................GTGGTTTGGTTGTCTGTCTACG... 22 0 10 0.10 1 0 0 0 1 0
.....................................................................................................................................................CCAGACGACGTGGTTTGGTTGT............ 22 0 10 0.10 1 1 0 0 0 0
......................................................................................................................................................CAGACGACGTGGTTTGGTTGT............ 21 0 10 0.10 1 1 0 0 0 0
.................................................................................................................................................TGAGCCAGACGACGTGGTTTGGTTG............. 25 0 10 0.10 1 1 0 0 0 0
.......................................................................................................................................................AGACGACGTGGTTTGGTTGTCTG......... 23 0 10 0.10 1 1 0 0 0 0
........................CGTAGGACCACCGGCCTGGT........................................................................................................................................... 20 0 20 0.10 2 2 0 0 0 0
..................................................................................................................................................GAGCCAGACGACGTGGTTTG................. 20 0 10 0.10 1 1 0 0 0 0
..............................................................................................................................................................GTGGTTTGGTTGTCTGTCTAC.... 21 0 10 0.10 1 1 0 0 0 0
...................TGTTGCGTAGGACCACCGGCCTGGT........................................................................................................................................... 25 0 20 0.10 2 2 0 0 0 0
......................................................................................................................................................AAGACGACGTGGTTTGGTTGT............ 21 1 10 0.10 1 1 0 0 0 0
........................................................................................................................................................GACGACGTGGTTTGGTTGTCTG......... 22 0 10 0.10 1 1 0 0 0 0
..........................................................................................................................................................AGACGTGGTTTGATTGTCTGT........ 21 2 10 0.10 1 1 0 0 0 0
.......................................................................................................................................................AGACGACGTGGTTTGATTGTCTGT........ 24 1 10 0.10 1 1 0 0 0 0
..................CTGTTGCGTAGGACCACCGGCCTGGT........................................................................................................................................... 26 0 20 0.10 2 1 0 1 0 0
......................TGCGTAGGACCACCGGCCTGGTCG......................................................................................................................................... 24 0 20 0.10 2 2 0 0 0 0
.....................................................................................................................................................CCAGACGACGTGGTTTGGT............... 19 0 10 0.10 1 1 0 0 0 0
.......................................................................................................................................................AGCCGACGTGGTTTGGTTGTCTGT........ 24 1 10 0.10 1 1 0 0 0 0
...........................................................................................................................................................GACGTGGTTTGGTTATCTGTCTA..... 23 1 10 0.10 1 1 0 0 0 0
.......................................................................................................................................................AAACGACGTGGTTTGGTTGTCTGT........ 24 1 10 0.10 1 1 0 0 0 0
..............................................................................................................................................................GTGGTTTGGTTGTCTGTC....... 18 0 10 0.10 1 1 0 0 0 0
........................................................................................................................................................AACGACGTGGTTTGGTTGTCT.......... 21 1 10 0.10 1 1 0 0 0 0
.........................................................................................................................................................ACGACGTGGTTTGGTTGTCTG......... 21 0 10 0.10 1 1 0 0 0 0
........................................................................................................................................................GACGACGTGGTTTGGTTGCCTGT........ 23 1 10 0.10 1 1 0 0 0 0
.................................................................................................................CTGTTACGTAGAGCCCACCGGCCTGGT........................................... 27 0 20 0.10 2 2 0 0 0 0
...........................................................................................................................................................GACGTGGTTTGGTTGTCTGTCTA..... 23 0 10 0.10 1 1 0 0 0 0
...............................................................................................................................................................TGGTTTGGTTGTCTGTCTAC.... 20 0 10 0.10 1 1 0 0 0 0
................................................................................................................................................................GGTTTGGTTGTCTGTCTAC.... 19 0 11 0.09 1 1 0 0 0 0
.................................................................................................................................................................GTTTGGTTGTCTGTCTACG... 19 0 11 0.09 1 0 0 1 0 0
.............................................................................................................................................................TGTGGTTTGGTTGTCTGTC....... 19 1 11 0.09 1 1 0 0 0 0
...................................................................................AGTGTGGAGCTAGGGTTA.................................................................................. 18 2 15 0.07 1 0 0 0 0 1
...GGTTGTTAATTTTAGCTGT................................................................................................................................................................. 19 0 19 0.05 1 1 0 0 0 0
GACGGTTGTTAATTTTAGCTGTT................................................................................................................................................................ 23 1 19 0.05 1 1 0 0 0 0
.CCGGTTGTTAATTTTAGCTGTTGCG............................................................................................................................................................. 25 0 19 0.05 1 1 0 0 0 0
...GGTTGTTAATTTTAGCTGTTGCGT............................................................................................................................................................ 24 0 19 0.05 1 1 0 0 0 0
..CGGTTGTTAATTTTAGCTGTTGCG............................................................................................................................................................. 24 0 19 0.05 1 1 0 0 0 0
GCCGGTTGTTAATTTTAGCTGTT................................................................................................................................................................ 23 0 19 0.05 1 1 0 0 0 0
......TGTTAATTTTAGCTGTTGCGTAG.......................................................................................................................................................... 23 0 19 0.05 1 1 0 0 0 0
TCCGGTTGTTAATTTTAGCTGTTGCG............................................................................................................................................................. 26 1 19 0.05 1 1 0 0 0 0
.CCGGTTGTTAATTTTAGCTGTTGCGTAG.......................................................................................................................................................... 28 0 19 0.05 1 0 1 0 0 0
..................CTGTTGCGTAGGACCACCGGC................................................................................................................................................ 21 0 20 0.05 1 1 0 0 0 0
........................................................................................................................GTAGAGCCCACCGGCCTGGTCACGGT..................................... 26 0 20 0.05 1 1 0 0 0 0
......................................................................................................................ACGTAGAGCCCACAGGCCTGGT........................................... 22 1 20 0.05 1 1 0 0 0 0
.........................................GGTCGTCGGTGAACCTACGCCGGTTAA................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0
............................................................................................................................AGCCCACCGGCCTGGTCACGGTGAGC................................. 26 0 20 0.05 1 1 0 0 0 0
......................TGCGTAGGACCACCGGCCTGGTCCT........................................................................................................................................ 25 1 20 0.05 1 1 0 0 0 0
.............TTTAGCTGTTGCGTAGGACGACCGGCCT.............................................................................................................................................. 28 1 20 0.05 1 1 0 0 0 0
...............................CCACCGGCCTGGTCGTCGGTGAAC................................................................................................................................ 24 0 20 0.05 1 1 0 0 0 0
..........................TTGGACCACCGGCCTGGTCGTCGGT.................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0
.........................................................................................................................TAGAGCCCACCGGCCTGGTCACGGT..................................... 25 0 20 0.05 1 1 0 0 0 0
.................................TCCGGCCTGGTCGTCGGTGAAC................................................................................................................................ 22 1 20 0.05 1 1 0 0 0 0
.......................GCGTAGGACCACCGGCCTGGTCG......................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0
.....................................................................................................................TACGTAGAGCCCACCGGCCTGGT........................................... 23 0 20 0.05 1 1 0 0 0 0
.................................................................................................................CTGTTACGTAGAGCCCACCGGCCT.............................................. 24 0 20 0.05 1 0 0 1 0 0
....................GTTGCGTAGGACTACCGGCCT.............................................................................................................................................. 21 1 20 0.05 1 1 0 0 0 0
................................CACCGGCCTGGTCGTCGGTGAACCTAC............................................................................................................................ 27 0 20 0.05 1 1 0 0 0 0
....................................GGCCTGGTCGTCGGTGAACCT.............................................................................................................................. 21 0 20 0.05 1 1 0 0 0 0
..........................................................................................................................AGAGCCCACCGGCCTGGTCACGGTGAGC................................. 28 0 20 0.05 1 1 0 0 0 0
.........................................................................................................................TTGAGCCCACCGGCCTGGTCACGGT..................................... 25 1 20 0.05 1 1 0 0 0 0
........................................................................................................................GTAGAGCCCACCGGCCTGGTCACG....................................... 24 0 20 0.05 1 1 0 0 0 0
........................TGTAGGACCACCGGCCTGGTCGT........................................................................................................................................ 23 1 20 0.05 1 0 0 1 0 0
.......................................................................................................................CGTAGAGCCCACCGGCCTGGTCAC........................................ 24 0 20 0.05 1 1 0 0 0 0
...........................AGGACCACCGGCCTGGTCGT........................................................................................................................................ 20 0 20 0.05 1 1 0 0 0 0
.........................ATAGGACCACCGGCCTGGTCGTCGGT.................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0
................AGCTGTTGCGTAGGACCACCGGCCT.............................................................................................................................................. 25 0 20 0.05 1 1 0 0 0 0
.................GCTGTTGCGGAGGACCACGGGGC............................................................................................................................................... 23 3 20 0.05 1 0 0 0 0 1
..............................................................................................................................CCCACCGGCCTGGTCACGGTGAGC................................. 24 0 20 0.05 1 1 0 0 0 0
...................TGTTGCGTAGGACCAGCGGCCTGG............................................................................................................................................ 24 1 20 0.05 1 1 0 0 0 0
....................GTTGCGTAGGACCACCGGC................................................................................................................................................ 19 0 20 0.05 1 1 0 0 0 0
......................TGCGTAGGACCACCGGCCT.............................................................................................................................................. 19 0 20 0.05 1 1 0 0 0 0
...............................CCACCGGCCTGGTCGTCGGTGA.................................................................................................................................. 22 0 20 0.05 1 1 0 0 0 0
...........................AGGACCACCGGCCTGGTCGTCGGT.................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0
..................................CCGGCCTGGTCGTCGGTGAAC................................................................................................................................ 21 0 20 0.05 1 1 0 0 0 0
.............................GACCACCGGCCTGGTCGTCGGT.................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0
.........................ATAGGACCACCGGCCTGGTCG......................................................................................................................................... 21 1 20 0.05 1 1 0 0 0 0
...............................................................................................................ACATGTAATGTAGAGCCCA..................................................... 19 3 20 0.05 1 0 0 0 0 1
..........................AAGGACCACCGGCCTGGTCGTCGGT.................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0
....................GTTGCGTAGGACCACCGGGCTGGTCGT........................................................................................................................................ 27 1 20 0.05 1 1 0 0 0 0
.................................CCCGGCCTGGTCGTCGGTGAACCT.............................................................................................................................. 24 1 20 0.05 1 1 0 0 0 0
....................GTTGCTTAGGACCACCGGCCTGGT........................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0
....................GTTGCGTAGGACCACTGGCCTGGT........................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0
....................GTTGCGTAGGACCACCGGCC............................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_3913:1924-2106 - dpe_285 CGGCCAACAATTAAAATCGACAACGCA-----TCCTGGTGGCCGG-ACCAGCAGCCACTTGGATGCGGCCAATACTCGACTCGTTGGCATCACACCTCGATGCCAACGCAAACACATTGGA--C-------------AATGCATCTCGGGTGGCCGGACCAGTGCCACTCGGTCTGCTGCACCAAACCAACAGACAGATGCAAC
dp5 Unknown_group_319:3490-3673 + ATTTAAA---TTGCATTTATCAATGCCCAGTGTGCTATCGGTCGCCAACTTCGGCAATTTATGCCCAGCCAATCCCACACCCACCCCCCCC--TACCCACTTCAAATGCCAATAAATACCAAATGAGGCTGAGCAGGAACAAAATTTACACTGCCA-GCCATCGCCACTCTGCCACACGCCCCAACAA--------------AG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
CGGCCAACAATTAAAATCGACAACGCA-----TCCTGGTGGCCGG-ACCAGCAGCCACTTGGATGCGGCCAATACTCGACTCGTTGGCATCACACCTCGATGCCAACGCAAACACATTGGA--C-------------AATGCATCTCGGGTGGCCGGACCAGTGCCACTCGGTCTGCTGCACCAAACCAACAGACAGATGCAACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........................................................................ACTCGACTCGTTGGCATCACACC............................................................................................................2333.67110110000
...............................................................TGCGGCCAATACTCGACTCGTTG......................................................................................................................2322.004040000
.........................................................................ACTCGACTCGTTGGCATCACAC.............................................................................................................2232.006060000
...............................................................TGCGGCCAATACTCGACTCGTTGGCA...................................................................................................................2621.503030000
.........................................................................ACTCGACTCGTTGGCATCACACCTC..........................................................................................................2531.334220000
.........................................................................ACTCGACTCGTTGGCATCAC...............................................................................................................2031.003210000
.....................................................................................................................TGGA--C-------------AATGCATCTCGGGTGGCC.................................................23201.00200200000
........................................................................TACTCGACTCGTTGGCATCACACCTC..........................................................................................................2621.002200000
........................................................................TACTCGACTCGTTGGCATCACA..............................................................................................................2221.002020000
.........................................................................ACTCGACTCGTTGGCATCAA...............................................................................................................2030.672200000
...........................................................................TCGACTCGTTGGCATCACACC............................................................................................................2130.672020000
.....................................................................................................................TGGA--C-------------AATGCATCTCGGGTGGCCG................................................24200.60120120000
.........................................................CTTGGATGCGGCCAATACTT...............................................................................................................................2020.501010000
.....................................................GCCACTTGGATGCGGCCAATACTCGACT...........................................................................................................................2820.501010000
........................................................................TACTCGACTCGTTGGCATCACACC............................................................................................................2420.501010000
........................................................................TACTCGACTCGTTGGCATC.................................................................................................................1920.501100000
........................................................................TACTCGACTCGTTGGCATCACACCTCG.........................................................................................................2720.501010000
.....................................................................CAATACTCGACTCGTTGGCATCACAC.............................................................................................................2620.501010000
.............AAATCGACAACGCA-----TCCTGGTGGC..................................................................................................................................................................24200.408080000
.........................................................................ACTCGACTCGTTGGCATCACA..............................................................................................................2130.331010000
.........................................................................ACTCGACTCGTTGGCATC.................................................................................................................1830.331100000
.........................................................................ACTCGACTCGTTGGCATCACACCTCGA........................................................................................................2730.331010000
.........................................................................................TCACACCTCGATGCCAACGCAAACAC.........................................................................................2630.331010000
...........................................................................TCGACTCGTTGGCATCACACCTCGA........................................................................................................2530.331010000
................TCGACAACGCA-----TCCTGGTGGCCGG-..............................................................................................................................................................24200.255050000
...........TAAAATCGACAACGCA-----TCCTGG......................................................................................................................................................................22180.112020000
......................................TGGCCGG-ACCAGCAGCCACTTGGAA............................................................................................................................................25200.102020000
.............AAATCGACAACGCA-----TCCTGGTGGCC.................................................................................................................................................................25200.102020000
.............AAATCGACAACGCA-----TCCTGGTGGCCGG-..............................................................................................................................................................27200.102020000
........................................................................................................................................................................TCGGTCTGCTGCACCAAAAA................20110.091010000
...........TAAAATCGACAACGCA-----TCCTGGTGGCC.................................................................................................................................................................27180.061010000
...........TAAAATCGACAACGCA-----TCCTGGTGG...................................................................................................................................................................25180.061010000
...CCAACAATTAAAATCGACAACGCA-----T...........................................................................................................................................................................25190.051010000
.........................................................................................................................................AATGCATCTCGGGTGGCCGGAC.............................................22200.051010000
......................................................................................................................GGA--C-------------AATGCATCTCGGGT.....................................................18200.051010000
.....................................................................................................................TGGA--C-------------AATGCATCTCGGGTAT...................................................21200.051010000
......................................TGGCCGG-ACCAGCAGCCACTTGG..............................................................................................................................................23200.051010000
............................................................................................................................................GCATCTCGGGTGGCCGGACCAGTG........................................24200.051010000
........................................................................................................................A--C-------------AATGCATCTCGGGTGGC..................................................19200.051010000
.......................CGCA-----TCCTGGTGGCCGG-A.............................................................................................................................................................18200.051010000
.............AAATCGACAACGCA-----TCCTGGTGGCCG................................................................................................................................................................26200.051010000
.................................................................................................................................................TCGGGTGGCCGGACCAGTGCC......................................21200.051000100
.............AAATCGACAACGCA-----TCCTGGTGGCA.................................................................................................................................................................25200.051010000
dp5
ATTTAAA---TTGCATTTATCAATGCCCAGTGTGCTATCGGTCGCCAACTTCGGCAATTTATGCCCAGCCAATCCCACACCCACCCCCCCC--TACCCACTTCAAATGCCAATAAATACCAAATGAGGCTGAGCAGGAACAAAATTTACACTGCCA-GCCATCGCCACTCTGCCACACGCCCCAACAA--------------AGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................................................................................................................................TTTACACTGCCA-GCCATCGCCACTC..................................252173.503470306300600500
................................................................................................................................................TTTACACTGCCA-GCCATCGCCACT...................................24289.501790160150400000
................................................................................................................................................TTTACACTGCCA-GCCATCGCCAC....................................23289.50179016690400000
................................................................................................................................................TTTACACTGCCA-GCCATCGCC......................................21251.5010309290200000
..............................TGTGCTATCGGTCGCCAACTTCGGCAA...................................................................................................................................................27146.004603500300800
..............................TGTGCTATCGGTCGCCAACTTCGG......................................................................................................................................................24143.004303400100800
................................................................................................................................................TTTACACTGCCA-GCCATCGCCA.....................................22241.008207730200000
....................................................................................................................TACCAAATGAGGCTGAGCAGGAAC................................................................24129.002901730000900
.................................................................................................................................................TTACACTGCCA-GCCATCGCCACTC..................................24225.505104910100000
................................................................................................................................................TTTACACTGCCA-GCCATCGC.......................................20224.504904520200000
...............................................................................................................ATAAATACCAAATGAGGCTGAGCAG....................................................................25121.002101500002400
.................................................................................................................................................TTACACTGCCA-GCCATCGCCACT...................................23219.503903340100100
..............................TGTGCTATCGGTCGCCAACTTCGGC.....................................................................................................................................................25115.001501100000400
...............................................................................................................ATAAATACCAAATGAGGCTGAGC......................................................................23115.001501130100000
..............................TGTGCTATCGGTCGCCAACTTCGGCAAT..................................................................................................................................................28115.001501410000000
....................................................................................................................TACCAAATGAGGCTGAGCAGG...................................................................21113.001301200100000
....................................................................................................................TACCAAATGAGGCTGAGCAGGAACAA..............................................................26112.001201200000000
................................................................................................................................................TTTACACTGCCA-GCCATCGCCACTCTG................................27211.502302300000000
...TAAA---TTGCATTTATCAATGCCCAGTG............................................................................................................................................................................26111.00110400000700
.................................................................................................................................................TTACACTGCCA-GCCATCGCCAC....................................22210.502102100000000
..............................TGTGCTATCGGTCGCCAACTTCGGCAATT.................................................................................................................................................29110.00100540000100
................................................................................................................................................TTTACACTGCCA-GCCATCGCCACTCT.................................26210.002001630100000
....................................................................................................................TACCAAATGAGGCTGAGCAGGAA.................................................................23110.001001000000000
..............................TGTGCTATCGGTCGCCAACTTCG.......................................................................................................................................................23110.00100810100000
................................................................................................................TAAATACCAAATGAGGCTGAGCAGG...................................................................2519.0090800000100
................................................................................................................TAAATACCAAATGAGGCTGAGC......................................................................2218.0080710000000
....................................................................................................................TACCAAATGAGGCTGAGCAG....................................................................2018.0080700001000
..............................TGTGCTATCGGTCGCCAACTTCGGCA....................................................................................................................................................2618.0080800000000
.................................................................................................................................................TTACACTGCCA-GCCATCGCC......................................2028.001601500100000
....................................................................................................................TACCAAATGAGGCTGAGCAGGA..................................................................2218.0080700000100
.................................................................................................................................................TTACACTGCCA-GCCATCGCCA.....................................2127.501501500000000
................................................................................................................................................TTTACACTGCCA-GCCATCGCCACTCTGC...............................2827.001401220000000
................................................................................................................TAAATACCAAATGAGGCTGAGCAG....................................................................2416.0060600000000
...............................................................................................................ATAAATACCAAATGAGGCTGAGCA.....................................................................2416.0060600000000
................................................................................................................TAAATACCAAATGAGGCTGAGCA.....................................................................2316.0060600000000
...............................................................................................................ATAAATACCAAATGAGGCTGAGCAGG...................................................................2616.0060600000000
....................................................................................................................TACCAAATGAGGCTGAGCAGGAACA...............................................................2516.0060600000000
................................................................................................................................................TTTACACTGCCA-GCCATCG........................................1925.501101100000000
...............................GTGCTATCGGTCGCCAACTTCGG......................................................................................................................................................2315.0050400000100
................................................................................................................TAAATACCAAATGAGGCTGAG.......................................................................2115.0050500000000
....................................................................................................................TACCAAATGAGGCTGAGCA.....................................................................1915.0050500000000
.................................................................................................................AAATACCAAATGAGGCTGAG.......................................................................2014.0040200000200
...............................................................................................................ATAAATACCAAATGAGGCTGAG.......................................................................2214.0040400000000
...........................................................TATGCCCAGCCAATCCCACACCCACCC......................................................................................................................2724.0080620000000
..............................TGTGCTATCGGTCGCCAACTTC........................................................................................................................................................2214.0040400000000
..................................................................................................................................................TACACTGCCA-GCCATCGCCACTC..................................2334.00120920100000
..................................................................................................................................................TACACTGCCA-GCCATCGCCACTCTG................................2533.671101100000000
.................................................................................................................................................TTACACTGCCA-GCCATCGCCACTCT.................................2523.5070700000000
...............................................................................................................ATAAATACCAAATGAGGCTG.........................................................................2013.0030300000000
....................................................................................................................TACCAAATGAGGCTGAGC......................................................................1813.0030300000000
.........................................................TTTATGCCCAGCCAATCCCACACCC..........................................................................................................................2513.0030300000000
...TAAA---TTGCATTTATCAATGCCCAG..............................................................................................................................................................................2413.0030200000100
...............................................................................................................ATAAATACCAAATGAGGCTGA........................................................................2113.0030200100000
.................................................................................................................AAATACCAAATGAGGCTGAGC......................................................................2113.0030300000000
..........................................................................................................TGCCAATAAATACCAAATGAGGCTG.........................................................................2513.0030000000300
..............................TGTGCTATCGGTCGCCAACTTCGGCAAA..................................................................................................................................................2813.0030100000200
.................................................................................................................AAATACCAAATGAGGCTGAGCAGG...................................................................2413.0030300000000
...............TTTATCAATGCCCAGTGTGCTATCGG...................................................................................................................................................................2613.0030000000300
...............................GTGCTATCGGTCGCCAACTTCGGCAA...................................................................................................................................................2613.0030300000000
.................................................................................................................................................TTACACTGCCA-GCCATCGCCACTCTG................................2623.0060600000000
...........................................................TATGCCCAGCCAATCCCACACCC..........................................................................................................................2332.6780620000000
.................................................................................................................................................TTACACTGCCA-GCCATCGC.......................................1922.5050400100000
..................................................................................................................................................TACACTGCCA-GCCATCGCCACTCT.................................2432.3370700000000
..................................................................................................................................................TACACTGCCA-GCCATCGCCACT...................................2232.3370520000000
..................................................................................................................................................TACACTGCCA-GCCATCGCCAC....................................2132.0060600000000
...TAAA---TTGCATTTATCAATGCCC................................................................................................................................................................................2212.0020200000000
..........................................................................................................TGCCAATAAATACCAAATGAGGCTGAGC......................................................................2812.0020200000000
............................................................................................................CCAATAAATACCAAATGAGGCTGAG.......................................................................2512.0020200000000
...........................................................TATGCCCAGCCAATCCCACACCCACC.......................................................................................................................2632.0060600000000
.................TATCAATGCCCAGTGTGCTATCGG...................................................................................................................................................................2412.0020000000200
...............................................................................................................ATAAATACCAAATGAGGCTGAGCAA....................................................................2512.0020200000000
.....................................................................................................TCAAATGCCAATAAATACCAAATGAGG............................................................................2712.0020200000000
.......................TGCCCAGTGTGCTATCGGTCG................................................................................................................................................................2112.0020200000000
................................................................................................................TAAATACCAAATGAGGCTGAGCAA....................................................................2412.0020200000000
................................................................................................................................................TTTACACTGCCA-GCCATCGCCACTA..................................2522.0040310000000
................................................................................................................TAAATACCAAATGAGGCTGAGCAGGAA.................................................................2712.0020200000000
......................................................................................................CAAATGCCAATAAATACCAAATGAGGC...........................................................................2712.0020110000000
............................................................................................................CCAATAAATACCAAATGAGGCTG.........................................................................2312.0020200000000
..........................................................................................................TGCCAATAAATACCAAATGAGG............................................................................2212.0020200000000
.........................................TCGCCAACTTCGGCAATTTATGCCCAGC.......................................................................................................................................2812.0020200000000
.............................................................................................................CAATAAATACCAAATGAGGCTGAG.......................................................................2412.0020200000000
................................................................................................................................................TTTACACTGCCA-GCCATC.........................................1822.0040400000000
................................................................................................................................................TTTACACTGCCA-GCCATCGCCACC...................................2422.0040040000000
...........................................................TATGCCCAGCCAATCCCACACCCA.........................................................................................................................2431.6750320000000
...............................................................................................................................................ATTTACACTGCCA-GCCATCGCCACTC..................................2621.5030300000000
................................................................................................................................................TTTACACTGCCA-GCCATCGCCACTCTGCC..............................2921.5030300000000
.................................................................................................................................................TTACACTGCCA-GCCATCG........................................1821.5030300000000
................................................................................................................................................TTTACACTGCCA-GCCATCGCCACTT..................................2521.5030210000000
...TAAA---TTGCATTTATCAATGC..................................................................................................................................................................................2021.5030210000000
................................................................................................................................................TTTACACTGCCA-GCCATCGCCAA....................................2321.5030300000000
.............................................................TGCCCAGCCAATCCCACACCCACCCC.....................................................................................................................2621.5030300000000
..................................................................................................................................................TACACTGCCA-GCCATCGCCACTCTGC...............................2631.3340210000100
...........................................................TATGCCCAGCCAATCCCACACC...........................................................................................................................2231.3340220000000
......................................................................................................................................................CTGCCA-GCCATCGCCACTCTG................................2151.2060600000000
.....................................................................................................TCAAATGCCAATAAATACCA...................................................................................2011.0010100000000
................................................................................................................................................TTTACACTGCCA-GCCATCGCCT.....................................2221.0020200000000
..........................................................................................................TGCCAATAAATACCAAATGAGGCTGA........................................................................2611.0010100000000
................................TGCTATCGGTCGCCAACTTCGGCAA...................................................................................................................................................2511.0010100000000
...............................GTGCTATCGGTCGCCAACTTCGGCAATT.................................................................................................................................................2811.0010000100000
...........................................................................................................GCCAATAAATACCAAATGAGGCTGAGC......................................................................2711.0010100000000
...............................GTGCTATCGGTCGCCAACTTCGGC.....................................................................................................................................................2411.0010100000000
...........................................................TATGCCCAGCCAATCCCACACCCAC........................................................................................................................2531.0030210000000
.............................................................................................................CAATAAATACCAAATGAGGCTG.........................................................................2211.0010100000000
.......................TGCCCAGTGTGCTATCGGTCGCT..............................................................................................................................................................2311.0010000100000
...................................................................................CCCCCCCC--TACCCACTTCAAATGCCAA............................................................................................2711.0010100000000
...................................................................................................................ATACCAAATGAGGCTGAGCA.....................................................................2011.0010100000000
..............................................................................................................AATAAATACCAAATGAGGCTGA........................................................................2211.0010100000000
..............................TGTGCTATCGGTCGCCAACTT.........................................................................................................................................................2111.0010100000000
...................TCAATGCCCAGTGTGCTATCGG...................................................................................................................................................................2211.0010100000000
....................................................................................................TTCAAATGCCAATAAATACCA...................................................................................2111.0010100000000
................................TGCTATCGGTCGCCAACTTCG.......................................................................................................................................................2111.0010100000000
..........................................................................................................TGCCAATAAATACCAAATGAGGCTGAGA......................................................................2811.0010100000000
.............................................................................................TACCCACTTCAAATGCCAATAAATACC....................................................................................2711.0010100000000
................................TGCTATCGGTCGCCAACTTCGGCAATT.................................................................................................................................................2711.0010100000000
.........................................TCGCCAACTTCGGCAATTTATGCCCA.........................................................................................................................................2611.0010000100000
...............................................................................................................ATAAATACCAAATGAGGCT..........................................................................1911.0010100000000
................................................................................................................TAAATACCAAATGAGGCTGAGCAGGA..................................................................2611.0010000000100
..................................................TCGGCAATTTATGCCCAGCCAATCC.................................................................................................................................2521.0020110000000
.............................................................................................................................................AAATTTACACTGCCA-GCCATCGCCACT...................................2721.0020000000200
.............................................................TGCCCAGCCAATCCCACACCCACCC......................................................................................................................2521.0020200000000
..................................CTATCGGTCGCCAACTTCGGCAA...................................................................................................................................................2311.0010100000000
.................................................................................................................................................TTACACTGCCA-GCCATCGCCACA...................................2321.0020100100000
...........................CAGTGTGCTATCGGTCGCC..............................................................................................................................................................1911.0010000100000
..TTAAA---TTGCATTTATCAATGCCC................................................................................................................................................................................2311.0010100000000
...............................GTGCTATCGGTCGCCAACTTCGA......................................................................................................................................................2311.0010100000000
.......................................................................................................................................................TGCCA-GCCATCGCCACTCTGCCA.............................2351.0050500000000
...................................................................................................................ATACCAAATGAGGCTGAGT......................................................................1911.0010100000000
.................................................................................................................AAATACCAAATGAGGCTGAGCA.....................................................................2211.0010100000000
.........................................................TTTATGCCCAGCCAATCCCACACCCACC.......................................................................................................................2811.0010010000000
..............................................................................................................AATAAATACCAAATGAGGCTG.........................................................................2111.0010100000000
..........TTGCATTTATCAATGCCCAGTG............................................................................................................................................................................2221.0020200000000
..................................................................................................................................................TACACTGCCA-GCCATCGCCA.....................................2031.0030300000000
...................................................................................................................................................ACACTGCCA-GCCATCGCCACTC..................................2251.0050500000000
................................................................................................................................................TTTACACTGCCA-GCCATCGCA......................................2121.0020200000000
.....................AATGCCCAGTGTGCTATCGG...................................................................................................................................................................2011.0010100000000
..............................TGTGCTATCGGTCGCCAACTTCGGCAAC..................................................................................................................................................2811.0010100000000
................................................................................................................................................TTTACACTGCCA-GCCATCGT.......................................2021.0020200000000
.........................................................................CCCACACCCACCCCCCCC--TACC...........................................................................................................2211.0010100000000
.............................................................................................TACCCACTTCAAATGCCAATAAATAC.....................................................................................2611.0010100000000
.........................................................TTTATGCCCAGCCAATCCCACACCCA.........................................................................................................................2611.0010100000000
..................................................................................................................AATACCAAATGAGGCTGAGCAGG...................................................................2311.0010100000000
...TAAA---TTGCATTTATCAATGCCT................................................................................................................................................................................2211.0010100000000
.......................................................................................................................................................TGCCA-GCCATCGCCACTCTGCCACA...........................2551.0050500000000
.........................................................................................................ATGCCAATAAATACCAAATGAGGC...........................................................................2411.0010100000000
..............ATTTATCAATGCCCAGTGTGC.........................................................................................................................................................................2111.0010100000000
...................................................................................................................ATACCAAATGAGGCTGAGCAGGAA.................................................................2411.0010100000000
...................................................................................................................ATACCAAATGAGGCTGAGCAGGA..................................................................2311.0010100000000
....................................................................................................................TACCAAATGAGGCTGAGCAGGAAA................................................................2411.0010000000100
..........................CCAGTGTGCTATCGGTCGCCAACT..........................................................................................................................................................2411.0010100000000
.....................................................................CAATCCCACACCCACCCCCCC..................................................................................................................2111.0010100000000
................................................................................................................................................TTTACACTGCCA-GCCATCGCCACTCTGT...............................2821.0020200000000
...................................TATCGGTCGCCAACTTCGGCA....................................................................................................................................................2140.7530210000000
................................................................................................................................................................ATCGCCACTCTGCCACACGC........................20110.7380700000100
.............................................................TGCCCAGCCAATCCCACACCCACC.......................................................................................................................2430.6720100000010
..................................................................................................................................................TACACTGCCA-GCCATCGCCACTCTGCC..............................2730.6720200000000
..........................................................TTATGCCCAGCCAATCCCACACCC..........................................................................................................................2430.6720200000000
..................................................................................................................................................TACACTGCCA-GCCATCGCCACTCTGCCA.............................2830.6720110000000
..........................................................TTATGCCCAGCCAATCCCACACCCACC.......................................................................................................................2730.6720100000100
.....................................................................................................................................CAGGAACAAAATTTACACTGCCA-GCC............................................2620.5010010000000
................................................................................................................................................TTTACACTGCCA-GCCATCGCCACA...................................2420.5010100000000
..............................................................................................................................................AATTTACACTGCCA-GCCATCGCCAC....................................2520.5010000100000
..................................................TCGGCAATTTATGCCCAGCCAATCCCACA.............................................................................................................................2920.5010100000000
............................................................................................................................................AAAATTTACACTGCCA-GC.............................................1820.5010010000000
..........................................................................................................................................ACAAAATTTACACTGCCA-GCC............................................2120.5010100000000
................................................................................................................................................TTTACACTGCCA-GCCATCGCCACTCAA................................2720.5010100000000
...........................................................TATGCCCAGCCAATCCCACAC............................................................................................................................2140.5020200000000
...............................................................................................................................................ATTTACACTGCCA-GCCATCGCCACT...................................2520.5010100000000
.........................................................TTTATGCCCAGCCAATCCC................................................................................................................................1920.5010100000000
..............................................AACTTCGGCAATTTATGCCCAGT.......................................................................................................................................2320.5010100000000
.................................................TTCGGCAATTTATGCCCAGCCAATC..................................................................................................................................2520.5010100000000
.................................................................................................................................................TTACACTGCCA-GCCATCGCCACTCTGCCA.............................2920.5010100000000
.................................................TTCGGCAATTTATGCCCAGCC......................................................................................................................................2120.5010100000000
................................................................................................................................................TTTACACTGCCA-GCCATCGCCACTG..................................2520.5010010000000
................................................................................................................................................TTTACACTGCCA-GCCATCGCG......................................2120.5010100000000
...........................................................................................................................................CAAAATTTACACTGCCA-GCCATCGCC......................................2620.5010010000000
......................................................CAATTTATGCCCAGCCAATCCCAC..............................................................................................................................2420.5010100000000
...........................................................................................................................TGAGGCTGAGCAGGAACAAAATT..........................................................2320.5010000000100
...........................................................................................................................................CAAAATTTACACTGCCA-GCC............................................2020.5010100000000
................................................................................................................................................TTTACACTGCCA-GCCATCGCCACTCA.................................2620.5010100000000
...............................................................................................................................................ATTTACACTGCCA-GCCATCGCCA.....................................2320.5010100000000
.............................................CAACTTCGGCAATTTATGCCC..........................................................................................................................................2120.5010010000000
...........................................................TATGCCCAGCCAATCCCACA.............................................................................................................................2040.5020100000100
...............................................................................................................................................ATTTACACTGCCA-GCCATCGC.......................................2120.5010100000000
...................................TATCGGTCGCCAACTTCGGCAAT..................................................................................................................................................2340.5020100000100
...........................................................TATGCCCAGCCAATCCCACACCCACCCC.....................................................................................................................2820.5010100000000
......................................................................................................................................AGGAACAAAATTTACACTGCC.................................................2120.5010100000000
.................................................................................................................................................TTACACTGCCA-GCCATCGCCACTCTGC...............................2720.5010100000000
.........................................................................................................................................AACAAAATTTACACTGCCA-GCC............................................2220.5010100000000
.............................................................................................................................................AAATTTACACTGCCA-GCCATCGCCAC....................................2620.5010100000000
.........................................................TTTATGCCCAGCCAATCCCA...............................................................................................................................2020.5010100000000
.......................................................................................................................CAAATGAGGCTGAGCAGG...................................................................1850.4020200000000
......................................................................................................................................................CTGCCA-GCCATCGCCACTCTGCCA.............................2450.4020200000000
......................................................................................................................................................CTGCCA-GCCATCGCCACT...................................1850.4020200000000
................................................................CCAGCCAATCCCACACCCACCC......................................................................................................................2250.4020200000000
..........................................................................................................................................................CA-GCCATCGCCACTCTGCCAC............................2150.4020200000000
.............................................................................................................................................................GCCATCGCCACTCTGCCACACGCCC......................2550.4020200000000
...................................................................................................................................................ACACTGCCA-GCCATCGCCACTCTGC...............................2550.4020200000000
...................................................................................................................................................ACACTGCCA-GCCATCGCCACTCT.................................2350.4020200000000
.......................................................................................................................................................TGCCA-GCCATCGCCACTCTGCCAC............................2450.4020200000000
.................................................................................................................................................................TCGCCACTCTGCCACACGC........................19110.3640400000000
..................................................................................................................................................TACACTGCCA-GCCATCGCCACTCTGCA..............................2730.3310100000000
.............................................................TGCCCAGCCAATCCCACACCC..........................................................................................................................2130.3310100000000
.....................................................................................................................ACCAAATGAGGCTGAGCAG....................................................................1930.3310100000000
...................................TATCGGTCGCCAACTTCGGCAATTT................................................................................................................................................2530.3310100000000
..................................................................................................................................................TACACTGCCA-GCCATCGCCACTCC.................................2430.3310010000000
................................................................................................................................................TTTACACTGCCA-GCCATCGTA......................................2130.3310100000000
..................................................................................................................................................TACACTGCCA-GCCATCGCCAA....................................2130.3310100000000
..................................................................................................................................................TACACTGCCA-GCCATCGCC......................................1930.3310010000000
...........................................................TATGCCCAGCCAATCCCACACCCAA........................................................................................................................2530.3310100000000
............................................................ATGCCCAGCCAATCCCACACCCACC.......................................................................................................................2530.3310100000000
............................................................ATGCCCAGCCAATCCCACACCCAC........................................................................................................................2430.3310100000000
..........................................................TTATGCCCAGCCAATCCCACACCCA.........................................................................................................................2530.3310100000000
............................................................ATGCCCAGCCAATCCCACACCCA.........................................................................................................................2330.3310010000000

Generated: 05/15/2015 at 03:09 PM