dpe_277

Name	Class	Family	Strand
TRAM_I-int	LTR	Pao	+

AAGTCGCCTTGTGTGGCGATATCTGCAAAATGTACCGCTGTGTACGCGTTTTCCATCCCGATACGCACGTGTAGTGCATCCTATGGCGCAATGACCCGAAGGAGGAGATTCAGGTGTTCAAGTTGGAGACTGTTACTTACGGAACCAAACATGCCGCTTTCTTAGCAATTCGTGCTATGCA *********************************((......((((..(((((.(((.........(((...((((........)))).))).......)))))))).....))))......))******************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M042 female body	V111 male body
..................................................TTCCATCCCGATACGCACGTGTAG...........................................................................................................	24	0	3	4.00	12	11	1
..................................................TTCCATCCCGATACGCACGTGTAGTG.........................................................................................................	26	0	3	1.67	5	4	1
..................................................TTCCATCCCGATACGCACGTGTA............................................................................................................	23	0	3	1.33	4	4	0
....................................................................................................................................TTACTTACGGAACCAAACATGCCGC........................	25	0	3	1.00	3	3	0
..................................................TTCCATCCCGATACGCACGTGTAGT..........................................................................................................	25	0	3	1.00	3	2	1
....................................................................................................................................TTACTTACGGAACCAAACATGCCGCTT......................	27	0	3	0.67	2	2	0
..................................................TTCCATCCAGATACGCACGTGTAGT..........................................................................................................	25	1	3	0.33	1	1	0
..................................................TTCCATCCCGATACGCACGTGTAGTGCA.......................................................................................................	28	0	3	0.33	1	1	0
..................................................TACCATCCCGATACGCACGTGTAGTG.........................................................................................................	26	1	3	0.33	1	1	0
..................................................TTCCATCCGGATACGCACGTGTAGTGC........................................................................................................	27	1	3	0.33	1	1	0
.............................................................................................................................GAGACTGTTACTTACGGAACCAAACA..............................	26	0	3	0.33	1	1	0
...................................................................................TGGCGCAATGACCCGAAGGAGGAGATT.......................................................................	27	0	20	0.15	3	1	2
...........................................................................................TGACCCGAAGGAGGAGATTCAGG...................................................................	23	0	20	0.10	2	2	0
...................TATCTGCAAAATGTACCGCTGTG...........................................................................................................................................	23	0	20	0.10	2	2	0
...................................................................................TGGCGCAATGACCCGAAGGAGGAGAT........................................................................	26	0	20	0.10	2	2	0
.........TGTGTGGCGATATCTGCAAAATGTA...................................................................................................................................................	25	0	20	0.05	1	1	0
.......................................................................................................................................................TGCCGCTTCCTTAGCAATTCG.........	21	1	20	0.05	1	1	0
.............................................................................................................TCAGGTGTTCAAGTTGGAGA....................................................	20	0	20	0.05	1	0	1
.............................................................................................ACCCGAAGGAGGAGATTCAGGTGG................................................................	24	1	20	0.05	1	1	0
...................................................................................TGGCGCAATGACCCGAAGGAGGAGA.........................................................................	25	0	20	0.05	1	1	0
.......................................................................................................................................................TGCCGCTTTCTTAGCAATTCGTGCTA....	26	0	20	0.05	1	1	0
.................................................................................TATGGCGCAATGACCCGAAGG...............................................................................	21	0	20	0.05	1	1	0
.................................................................................TATGGCGCAATGACCCGAAGGAGGA...........................................................................	25	0	20	0.05	1	1	0
.........TGTGTGGCCATATCTGCAAAATGTACC.................................................................................................................................................	27	1	20	0.05	1	1	0
.................................................................................TATGGCGCGATGACCCGAAGGAGGA...........................................................................	25	1	20	0.05	1	1	0
.......................TGCAAAATGTACCGCTGTGTACGCGTT...................................................................................................................................	27	0	20	0.05	1	1	0
.............................................................................................................................GAGACTGTTACTTACGGAACCAA.................................	23	0	20	0.05	1	1	0
.................................................................................TATGGCGCAATGACCCGAAGGAGGAGA.........................................................................	27	0	20	0.05	1	1	0
............GTGGCGATATCTGCAAAATGTACCG................................................................................................................................................	25	0	20	0.05	1	1	0
.............................................................................................................TCAGGTGTTCAAGTTGGAGAC...................................................	21	0	20	0.05	1	1	0

TTCAGCGGAACACACCGCTATAGACGTTTTACATGGCGACACATGCGCAAAAGGTAGGGCTATGCGTGCACATCACGTAGGATACCGCGTTACTGGGCTTCCTCCTCTAAGTCCACAAGTTCAACCTCTGACAATGAATGCCTTGGTTTGTACGGCGAAAGAATCGTTAAGCACGATACGT ******************************************************((......((((..(((((.(((.........(((...((((........)))).))).......)))))))).....))))......))*********************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M042 female body	M021 embryo
....................................GGACACATGCGCAAAAGGTAGGGC.........................................................................................................................	24	1	3	0.33	1	0	1
...................................................................GCACATCACGTAGGATACCGCGTTAC........................................................................................	26	0	3	0.33	1	1	0
.......................................AACATGCGCAAAAGGTAGGG..........................................................................................................................	20	1	3	0.33	1	1	0
...................................GCGACACATGCGCAAAAGGTAGGGC.........................................................................................................................	25	0	3	0.33	1	1	0
......GGAACACACCGCTATAGACGTTT........................................................................................................................................................	23	0	20	0.05	1	1	0
................................................................................................................CCACAAGTTCAACCTCTGACAATG.............................................	24	0	20	0.05	1	1	0
.....................................................................................TGCGTTACTGGGCTTCCTCCTCT.........................................................................	23	1	20	0.05	1	1	0
.......................................................................................................................TTCAACCTCTGACAATGAATGCCT......................................	24	0	20	0.05	1	1	0
......................................................................................................................GTTCAACCTCTGACAATGAATGCC.......................................	24	0	20	0.05	1	1	0
............CACCGCTATAGACGTTTTACA....................................................................................................................................................	21	0	20	0.05	1	1	0
...........................................................................................................TAAGTCCACAAGTTCAACCTCTGACAA...............................................	27	0	20	0.05	1	1	0
....................................................................................CCGCGTTACTGGGCTTCCTCCTCT.........................................................................	24	0	20	0.05	1	1	0
.........ACACACCGCTATAGACGTTTTACA....................................................................................................................................................	24	0	20	0.05	1	1	0

Species	Coordinate	ID	Alignment
droPer2	scaffold_180:46297-46477 +	dpe_277	AAGTCGCCTTGTGTGGCGATATCTGCAAAATGTACCGCTGTGTACGCGTTTTCCATCCCGATACGCACG-TGTAGTGCATCCTATGGCGCAATGACCCGAAGGAGGAGATTCAGGTGTTCAAGTTGGAGACTGTTACTTACGGAACCAAACATGCCGCTTTCTTAGCAATTCGTGCTATGCA
dp5	Unknown_singleton_83:1339-1519 +		AAGTCGCCTTGTGTGGCGATATCTGCAAAATGTACCGCTGTGTACGCGTTTCCCATCCCGATACGCACG-TGCAGTGCATCCTATGGCGCAATGACCCGAAGGAGGAGATTCAGGTGTTCAAGTTGGAGACTGTTACTTACGGAACCAAACCTGCCGCTTTCTTAGCAATTCGTGCTATGCA
droWil2	scf2_1100000012717:225-402 -		GAGTAGTTTTCAATGCCGACATCACAAAAATGTACCGCCAAATTATGGTCGATCCAATCCATACGCCAT-TTCAGAGGATCCTGTTCCGAAATAA---AGAGGGGCAACTTGGTGATTACGAGCTGAATACCGTCACGTTTGGCATTAACTGTGCTCCGTTCTTAGCCATCCGAGTACTTCA
droVir3	scaffold_13324:636158-636338 +		AGGTTGCCTTGTGCGGTGACGTCTGTAAGATGTACCGCTGTGTCCGAATAACGCATCCAGATCAATTTC-TGAAGTTCATCTTATGGCGTGATCACCAAAATGAAAGCATAAGGACGTACACCCTGGATACAGTAACGTATGGAACCAAACCCGCTGCGTTTCCAGCAATTCGAGCGATGCA
droMoj3	scaffold_6540:32791900-32792080 -		CCATTGCACTTACAGGTGATATTAGTAAAATGTATAGGTGTGTGAAGGTTTCAGAGCCTGATGCAATGC-TTCAATGTATCTTATGGCGAAACTCATCAGACGACGACATTCTAGTCTTCAAATTGAATACCGTTACTTATGGGACCAAGCCCGCTTCTTTTTTGGCTATTCGTGCAATGCA
droGri2	scaffold_14948:6833-7013 +		CTGTTGCTCTGACTGGGGATATATTCAAAATGTACCGTTGCGTTCGAGTGTCTGCTCCTGACAACTATT-ATCAATGCATTTTGTGGAGAGACTCACCCAAAGAAAGGGTACGTGTCTACAAGCTGGACACCGTGGCTTATGGCACCAAACCAGGCTCATTTTTGGCCATACGCTCCATGCA
droAna3	scaffold_13034:399962-400142 -		GAGTGGCCATTACAGGAGATATTTGCAAAATGTACCGATGCGTCAGAGTTTTCCCCGAGCTCAGCTATC-TGCAGTGCATTCTGTGGCGGAATTCCACCCAGGATGAGTTGCAGGTTTTTAAACTGGATACGGTCACTTATGGGACCAAAACGGCCTCATTTTTAGCAATTCGAGCAATGCA
droBip1	scf7180000391941:72-252 +		GGGTGGCCATTACTGGAGATATTTGTAAAATGTATCGTTGCGTCAGGGTTTTTCCTGAGGACAGCTATC-TTCAGTGTATTCTTTGGCGGGATTCCACCCAGGATGAGTTACAGGTTTTTAAGCTGGACACGGTCACTTACGGAACGAAGCCTGCCTCATTTTTAGCAGTTCGGACAATGCA
droKik1	scf7180000301783:9637-9816 +		AGGTAGCCTTGTGTGGAGATATTTGCAAAATGTATCGCTGCGTTCGGGTTACGCATCCCCATCAGTTTC-TGCAATGTATTCTATGGCGCGATCGGCCAGAAGACGAGATTCAAGTTTACTCGCTTGACACCGTAACCTATGGCACGAAGCCTGCTGC-TTTTTGGCAATTCGTGCAATGCA
droFic1	scf7180000451710:11894-12073 +		T-GTTGCATTGACTGGTGACGTCTGCAAGATGTATCGGTGTGTTCGCGTGGCTGAACCCGATAGCTACT-TCCAATGTATTCTTTGGCGTGACTCACCGGACCAGGAAGTGCAGGTATTCAAGCTGGATACCGTGACTTATGGAACCAAGCCTGCAGCCTTTTTACCCGTTCGAACGATGCA
droEle1	scf7180000491110:15200-15377 -		AAGCGCCCTT--GCGGCGATATTTGCAAAATGTATCGTTGAGTACACGTTTCTCACCCTGATCAGTACC-TGCAGTGCATTTTATGGCGTCCCGATCCTAAGGAAAGGTTTCAGATTTTCAAACTA-AAACAGTGACGTACGGAACGAAACCCGCTGCGTTTTTGGCAATTCGTGCCATGCA
droRho1	scf7180000763947:3404-3585 -		GAGTTGCTATGTGCGGCGATATTTGCAAGATGTATCGCTGTGTGCGAGTAACTCACCCAGATCAATTTCTTTCAGTGCATCCTATGGCGCGATCATCCCGATGAAGAAATAAAGACATACACGTTGGATACCGTAACGTACGGAACCAAGCCCGCTGCCTTTCTAGCAATTCGAGCAATGCA
droBia1	scf7180000298616:954-1133 -		AGGTTGCTTTGTGTGGAGATATTTGCAAAATGTTTCGCTGCGTTCGGGTTACGCATCCCCATCAGTTTC-TGCAATG-ATTTTATGGCGCGATCGGCCAGAAGACGAGGTTCAAGTTTACTCTCTTGACACCGTAACCTATGGCACGAAGCCTGCTGCTTTTTTGGCAATTCGTGCAATGCA
droTak1	scf7180000415942:9530-9710 -		AGGTTGCTTTGTGTGGGGATATTTGCAAAATGTATCGCTGCGTTCGGGTTACGCATCCCCATCAGTTTC-TGCAATGTATTTTATGGCGCGATCGGCCAGAAGACGAGGTTCAAGTTTACTCGCTTGACACCGTAACCTATGGCACGAAGCCTGCTGCTTTTTTGGCAATTCGTGCAATGCA
droEug1	scf7180000409835:32002-32182 +		AAGTTGCACTGTGCGGAGACGTCTGCAAAATGTGTCGTTGTGTTCGTATCTCTCATCCCAACCAGTTTC-TTTAATGTATTATATGGCGCAATAGGCCGGAAGACCAAATTCAAGTATACTCGCTTGACACCGTTACGTACGGCACTAAGCCAACTGCCTATTTGGCCATTCGTGCAATGCA
dm3	chr2L:22948890-22949070 +		CAGTTGCCATTACAGGAGACATATGTAAAATGTACCGATGTGTAAGGGTCTCGCAAGAAGATAGCTATT-TGGAGTGCATTGTATGGAGGGACTCCCCGATCGATGACCTTCAAGTATACAAACTCGACACAGTTACCTACGGCACCAAACCAGCCTCCTTCTTGTCCGTAAGGGCTATGCA
droSim2	node_18672:270-450 +		CAGTTGCCGTTACTGGAGACATATGTAAAATGTACTGATGTGTAAGGGTCTCGCAAGAAGATAGCTATT-TGCAGTGCATTGTATGGAGGGACTCCCCGATCGATGACCTTCAAGTATACAAACTCGACACAGTTACCTACGGCACCAAACCAGCCTCCTTCTTGTCCGTAAGGGCTATGCA
droSec2	scaffold_2904:376-556 +		CAGTCGCCGTTACAGGAGACATATGTAAAATGTACCGATGTGTAAGGGTCTCGCAAGAAGATAGCTATT-TGCAGTGCATTGTATGGAGGGACTCCCCGATCGATGACCTTCAAGTATACAAACTCGATACAGTTACCTACGGCACCAAACCAGCCTCCTTCTTGTCCGTAAGGGCTATGCA
droYak3	v2_chrUn_008:164703-164883 +		CAGTTGCCGTTACAGGAGACATATGTAAAATGTACCGATGTGTAAGGGTCTCGCAAGAAGATACCTATT-TGCAGTGCATTGTATGGAGGGACTCCCCGATCGATGACCTTCCAGTATACAAACTCGACACAGTTACCTACGGCACCAAACCAGCCTCCTTCTTGTCCGTAAGGGCTATGCA
droEre2	scaffold_4135:257-437 +		GGATTGCCTTGTGTGGCGATATTTGCAAGATGTACCGTTGTGTCCGCATGACACATCCTGATCAATATC-TGCAGTGCATTTTATGGCGCGACAATCCTGATGACGAGGTTAAGGTATACACTTTGGATACGGTGACCTACGGAACTAAGCCGGCTGCTTTCTTAGCAATTCGAGCTATGCA

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droPer2

AAGTCGCCTTGTGTGGCGATATCTGCAAAATGTACCGCTGTGTACGCGTTTTCCATCCCGATACGCACG-TGTAGTGCATCCTATGGCGCAATGACCCGAAGGAGGAGATTCAGGTGTTCAAGTTGGAGACTGTTACTTACGGAACCAAACATGCCGCTTTCTTAGCAATTCGTGCTATGCA	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
..................................................TTCCATCCCGATACGCACG-TGTAG...........................................................................................................	24	3	4.00	12	0	11	0	0	0	1
..................................................TTCCATCCCGATACGCACG-TGTAGTG.........................................................................................................	26	3	1.67	5	0	4	0	0	0	1
..................................................TTCCATCCCGATACGCACG-TGTA............................................................................................................	23	3	1.33	4	0	4	0	0	0	0
.....................................................................................................................................TTACTTACGGAACCAAACATGCCGC........................	25	3	1.00	3	0	3	0	0	0	0
..................................................TTCCATCCCGATACGCACG-TGTAGT..........................................................................................................	25	3	1.00	3	0	2	0	0	0	1
.....................................................................................................................................TTACTTACGGAACCAAACATGCCGCTT......................	27	3	0.67	2	0	2	0	0	0	0
..................................................TTCCATCCCGATACGCACG-TGTAGTGCA.......................................................................................................	28	3	0.33	1	0	1	0	0	0	0
..............................................................................................................................GAGACTGTTACTTACGGAACCAAACA..............................	26	3	0.33	1	0	1	0	0	0	0
....................................................................................TGGCGCAATGACCCGAAGGAGGAGATT.......................................................................	27	20	0.15	3	0	1	0	0	0	2
............................................................................................TGACCCGAAGGAGGAGATTCAGG...................................................................	23	20	0.10	2	0	2	0	0	0	0
...................TATCTGCAAAATGTACCGCTGTG............................................................................................................................................	23	20	0.10	2	0	2	0	0	0	0
....................................................................................TGGCGCAATGACCCGAAGGAGGAGAT........................................................................	26	20	0.10	2	0	2	0	0	0	0
.........TGTGTGGCGATATCTGCAAAATGTA....................................................................................................................................................	25	20	0.05	1	0	1	0	0	0	0
..............................................................................................................TCAGGTGTTCAAGTTGGAGA....................................................	20	20	0.05	1	0	0	0	0	0	1
..............................................................................................ACCCGAAGGAGGAGATTCAGGTGG................................................................	24	20	0.05	1	0	1	0	0	0	0
....................................................................................TGGCGCAATGACCCGAAGGAGGAGA.........................................................................	25	20	0.05	1	0	1	0	0	0	0
........................................................................................................................................................TGCCGCTTTCTTAGCAATTCGTGCTA....	26	20	0.05	1	0	1	0	0	0	0
..................................................................................TATGGCGCAATGACCCGAAGG...............................................................................	21	20	0.05	1	0	1	0	0	0	0
..................................................................................TATGGCGCAATGACCCGAAGGAGGA...........................................................................	25	20	0.05	1	0	1	0	0	0	0
.......................TGCAAAATGTACCGCTGTGTACGCGTT....................................................................................................................................	27	20	0.05	1	0	1	0	0	0	0
..............................................................................................................................GAGACTGTTACTTACGGAACCAA.................................	23	20	0.05	1	0	1	0	0	0	0
..................................................................................TATGGCGCAATGACCCGAAGGAGGAGA.........................................................................	27	20	0.05	1	0	1	0	0	0	0
............GTGGCGATATCTGCAAAATGTACCG.................................................................................................................................................	25	20	0.05	1	0	1	0	0	0	0
..............................................................................................................TCAGGTGTTCAAGTTGGAGAC...................................................	21	20	0.05	1	0	1	0	0	0	0

dp5

AAGTCGCCTTGTGTGGCGATATCTGCAAAATGTACCGCTGTGTACGCGTTTCCCATCCCGATACGCACG-TGCAGTGCATCCTATGGCGCAATGACCCGAAGGAGGAGATTCAGGTGTTCAAGTTGGAGACTGTTACTTACGGAACCAAACCTGCCGCTTTCTTAGCAATTCGTGCTATGCA	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
..............................................................................................................................GAGACTGTTACTTACGGAACCAAACC..............................	26	8	5.38	43	0	28	2	2	0	0	0	3	8	0
...................................................................................................................................TGTTACTTACGGAACCAAACCTGC...........................	24	7	4.29	30	0	10	0	0	0	0	0	13	7	0
...................................................................................................................................TGTTACTTACGGAACCAAACCTGCCGC........................	27	7	2.86	20	0	11	0	0	0	0	0	3	6	0
................................................TTTCCCATCCCGATACGCACG-TGC.............................................................................................................	24	9	2.78	25	0	23	1	0	1	0	0	0	0	0
................................................TTTCCCATCCCGATACGCACG-TG..............................................................................................................	23	9	2.00	18	0	18	0	0	0	0	0	0	0	0
...................................................................................................................................TGTTACTTACGGAACCAAACCTG............................	23	8	2.00	16	0	11	0	0	0	0	0	1	4	0
...................................................................................................................................TGTTACTTACGGAACCAAACCTGCCG.........................	26	7	1.71	12	0	9	0	0	0	0	0	2	1	0
.......................................................................................................AGGAGATTCAGGTGTTCAAGTTGG.......................................................	24	9	1.56	14	0	14	0	0	0	0	0	0	0	0
..................................................TCCCATCCCGATACGCACG-TGCAG...........................................................................................................	24	10	1.30	13	0	13	0	0	0	0	0	0	0	0
...................................................................................................................................TGTTACTTACGGAACCAAACCTGCC..........................	25	7	1.14	8	0	6	0	0	0	0	0	2	0	0
................................................TTTCCCATCCCGATACGCACG-T...............................................................................................................	22	9	1.11	10	0	10	0	0	0	0	0	0	0	0
.......................................................................................................AGGAGATTCAGGTGTTCAAGTTG........................................................	23	9	1.00	9	0	9	0	0	0	0	0	0	0	0
..................................................TCCCATCCCGATACGCACG-TGCA............................................................................................................	23	10	0.90	9	0	9	0	0	0	0	0	0	0	0
...................................................................................................................................TGTTACTTACGGAACCAAACCTGCCGCTT......................	29	7	0.86	6	0	5	0	0	0	0	1	0	0	0
..............................................................................................................................GAGACTGTTACTTACGGAACCAAAC...............................	25	8	0.75	6	0	5	0	0	0	0	0	0	1	0
....................................................................................................................................GTTACTTACGGAACCAAACCTGC...........................	23	8	0.75	6	0	6	0	0	0	0	0	0	0	0
................................................TTTCCCATCCCGATACGCACG-TGCAG...........................................................................................................	26	9	0.67	6	0	6	0	0	0	0	0	0	0	0
..................................................................................TATGGCGCAATGACCCGAAGGAGG............................................................................	24	6	0.67	4	0	1	1	0	0	0	1	0	1	0
....................................................................................TGGCGCAATGACCCGAAGGAGGAG..........................................................................	24	6	0.67	4	0	2	0	0	0	0	1	0	1	0
............................................................................................................................TGGAGACTGTTACTTACGGAACC...................................	23	9	0.56	5	0	4	0	0	0	0	0	1	0	0
......................................................................................................................TCAAGTTGGAGACTGTTACTTACGG.......................................	25	9	0.56	5	0	2	0	0	0	0	0	3	0	0
...............................................................................................................................AGACTGTTACTTACGGAACCAAACC..............................	25	8	0.50	4	0	4	0	0	0	0	0	0	0	0
.................................................TTCCCATCCCGATACGCACG-TGCAG...........................................................................................................	25	10	0.50	5	0	5	0	0	0	0	0	0	0	0
..................................................................................TATGGCGCAATGACCCGAAGGAGGA...........................................................................	25	6	0.50	3	0	2	1	0	0	0	0	0	0	0
..................................................................................TATGGCGCAATGACCCGAAGGAGGAGAT........................................................................	28	6	0.50	3	0	0	0	0	0	0	1	1	1	0
...........................................................................................................................TTGGAGACTGTTACTTACGGA......................................	21	9	0.44	4	0	0	0	0	0	0	0	0	4	0
............................................................................................TGACCCGAAGGAGGAGATTCAGGTG.................................................................	25	7	0.43	3	0	2	0	0	0	0	0	0	1	0
....................................................CCATCCCGATACGCACG-TGCAGT..........................................................................................................	23	10	0.40	4	0	4	0	0	0	0	0	0	0	0
.....................................................CATCCCGATACGCACG-TGCAGT..........................................................................................................	22	10	0.40	4	0	2	0	0	1	0	1	0	0	0
....................................................CCATCCCGATACGCACG-TGCAG...........................................................................................................	22	10	0.40	4	0	4	0	0	0	0	0	0	0	0
..................ATATCTGCAAAATGTACCGCTGTG............................................................................................................................................	24	10	0.40	4	0	1	0	0	0	0	0	3	0	0
.............................................GCGTTTCCCATCCCGATACGCACG-................................................................................................................	24	10	0.40	4	0	4	0	0	0	0	0	0	0	0
.................................................TTCCCATCCCGATACGCACG-TGCAGT..........................................................................................................	26	10	0.40	4	0	4	0	0	0	0	0	0	0	0
....................................................................................TGGCGCAATGACCCGAAGGAGGAGA.........................................................................	25	6	0.33	2	0	0	0	0	0	0	2	0	0	0
.................................................................................CTATGGCGCAATGACCCGAAGGAGG............................................................................	25	6	0.33	2	0	1	0	0	0	0	1	0	0	0
..............................................................................................................................GAGACTGTTACTTACGGAACCAA.................................	23	9	0.33	3	0	1	0	0	0	0	0	0	2	0
..................................................................................TATGGCGCAATGACCCGAAGGAGGAGA.........................................................................	27	6	0.33	2	0	1	0	0	0	0	1	0	0	0
..................................................................................TATGGCGCAATGACCCGAAGGAGGAG..........................................................................	26	6	0.33	2	0	2	0	0	0	0	0	0	0	0
....................................................................................TGGCGCAATGACCCGAAGG...............................................................................	19	6	0.33	2	0	2	0	0	0	0	0	0	0	0
....................................................................................TGGCGCAATGACCCGAAGGAGG............................................................................	22	6	0.33	2	0	2	0	0	0	0	0	0	0	0
.....................................................................................GGCGCAATGACCCGAAGGAGGA...........................................................................	22	6	0.33	2	0	2	0	0	0	0	0	0	0	0
....................................................................................TGGCGCAATGACCCGAAGGAGGA...........................................................................	23	6	0.33	2	0	1	0	0	0	0	1	0	0	0
..................................................................................TATGGCGCAATGACCCGAAGG...............................................................................	21	6	0.33	2	0	2	0	0	0	0	0	0	0	0
..................................................................................TATGGCGCAATGACCCGAAGGAG.............................................................................	23	6	0.33	2	0	2	0	0	0	0	0	0	0	0
....................................................................................TGGCGCAATGACCCGAAGGAG.............................................................................	21	6	0.33	2	0	2	0	0	0	0	0	0	0	0
...........................................................................TGCATCCTATGGCGCAATGACCCGAA.................................................................................	26	6	0.33	2	0	2	0	0	0	0	0	0	0	0
.................................................TTCCCATCCCGATACGCACG-TGCA............................................................................................................	24	10	0.30	3	0	3	0	0	0	0	0	0	0	0
.................................................TTCCCATCCCGATACGCACG-TGC.............................................................................................................	23	10	0.30	3	0	3	0	0	0	0	0	0	0	0
....................................................................................................................................GTTACTTACGGAACCAAACCTG............................	22	10	0.30	3	0	2	0	0	0	0	0	0	1	0
..............................................................................................................................GAGACTGTTACTTACGGAACCAAACCTGC...........................	29	7	0.29	2	0	2	0	0	0	0	0	0	0	0
..................................................................................................................................CTGTTACTTACGGAACCAAACCTGC...........................	25	7	0.29	2	0	2	0	0	0	0	0	0	0	0
..............................................................................................................TCAGGTGTTCAAGTTGGAGACTG.................................................	23	8	0.25	2	0	2	0	0	0	0	0	0	0	0
....................................................................................................................................GTTACTTACGGAACCAAACCTGCCGCTT......................	28	8	0.25	2	0	2	0	0	0	0	0	0	0	0
...................................................................................................................TGTTCAAGTTGGAGACTGTTACTTACGG.......................................	28	9	0.22	2	0	0	0	0	0	0	0	0	2	0
.......................................................................................................AGGAGATTCAGGTGTTCAAGTT.........................................................	22	9	0.22	2	0	1	0	0	0	0	0	0	1	0
...................................................................................................................TGTTCAAGTTGGAGACTGTTACTTACG........................................	27	9	0.22	2	0	0	0	0	0	0	0	0	2	0
......................................................................................................................................TACTTACGGAACCAAACCTGCCGCTT......................	26	9	0.22	2	0	2	0	0	0	0	0	0	0	0
..................................................TCCCATCCCGATACGCACG-TGCAGTG.........................................................................................................	26	10	0.20	2	0	2	0	0	0	0	0	0	0	0
................................................TTTCCCATCCCGATACGCACG-................................................................................................................	21	10	0.20	2	0	2	0	0	0	0	0	0	0	0
.....................................................CATCCCGATACGCACG-TGCAGTG.........................................................................................................	23	10	0.20	2	0	2	0	0	0	0	0	0	0	0
.....................................................CATCCCGATACGCACG-TGCAG...........................................................................................................	21	10	0.20	2	0	2	0	0	0	0	0	0	0	0
.............................................................TACGCACG-TGCAGTGCATCCTATGG...............................................................................................	25	10	0.20	2	0	2	0	0	0	0	0	0	0	0
.................................................TTCCCATCCCGATACGCACG-T...............................................................................................................	21	10	0.20	2	0	2	0	0	0	0	0	0	0	0
...................TATCTGCAAAATGTACCGCTGT.............................................................................................................................................	22	10	0.20	2	0	2	0	0	0	0	0	0	0	0
....................................................CCATCCCGATACGCACG-TGCAGTG.........................................................................................................	24	10	0.20	2	0	2	0	0	0	0	0	0	0	0
...................TATCTGCAAAATGTACCGCTGTG............................................................................................................................................	23	10	0.20	2	0	0	0	0	0	0	0	2	0	0
..................................................TCCCATCCCGATACGCACG-TGCAGT..........................................................................................................	25	10	0.20	2	0	2	0	0	0	0	0	0	0	0
..................................................TCCCATCCCGATACGCACG-TGC.............................................................................................................	22	10	0.20	2	0	2	0	0	0	0	0	0	0	0
.........TGTGTGGCGATATCTGCAAAATGTACC..................................................................................................................................................	27	11	0.18	2	0	2	0	0	0	0	0	0	0	0
.........TGTGTGGCGATATCTGCAAAATGTACCG.................................................................................................................................................	28	11	0.18	2	0	2	0	0	0	0	0	0	0	0
.................................................................................CTATGGCGCAATGACCCGAAGGAG.............................................................................	24	6	0.17	1	0	1	0	0	0	0	0	0	0	0
...................................................................................ATGGCGCAATGACCCGAAGGAGGA...........................................................................	24	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................GGCGCAATGACCCGAAGGAGGAGAT........................................................................	25	6	0.17	1	0	1	0	0	0	0	0	0	0	0
....................................................................................TGGCGCAATGACCCGAAGGAGA............................................................................	22	6	0.17	1	0	1	0	0	0	0	0	0	0	0
..................................................................................TATGGCGCAATGACCCGAAGGAGGT...........................................................................	25	6	0.17	1	0	1	0	0	0	0	0	0	0	0
..................................................................................TATGGCGCAATGACCCGAAGGAGGAC..........................................................................	26	6	0.17	1	0	1	0	0	0	0	0	0	0	0
....................................................................................TGGCGCAATGACCCGAAGGAGGAGATA.......................................................................	27	6	0.17	1	0	1	0	0	0	0	0	0	0	0
...................................................................................ATGGCGCAATGACCCGAAGGAGGAG..........................................................................	25	6	0.17	1	0	0	0	0	0	0	1	0	0	0
......................................................................TGCAGTGCATCCTATGGCGCAATGACCC....................................................................................	28	6	0.17	1	0	1	0	0	0	0	0	0	0	0
....................................................................................TGGCGCAATGACCCGAAGGAGGAC..........................................................................	24	6	0.17	1	0	1	0	0	0	0	0	0	0	0
...........................................................................TGCATCCTATGGCGCAATGACCCG...................................................................................	24	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................GGCGCAATGACCCGAAGGAGGAG..........................................................................	23	6	0.17	1	0	1	0	0	0	0	0	0	0	0
............................................................................................TGACCCGAAGGAGGAGATTCAA....................................................................	22	7	0.14	1	0	0	0	0	0	0	0	0	1	0
...........................................................................................ATGACCCGAAGGAGGAGATTCAG....................................................................	23	7	0.14	1	0	1	0	0	0	0	0	0	0	0
............................................................................................TGACCCGAAGGAGGAGATTCA.....................................................................	21	7	0.14	1	0	0	0	0	0	0	1	0	0	0
.............................................................................CATCCTATGGCGCAATGACCC....................................................................................	21	7	0.14	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................AATGACCCGAAGGAGGAGATT.......................................................................	21	7	0.14	1	0	1	0	0	0	0	0	0	0	0
............................................................................................TGACCCGAAGGAGGAGATTCAG....................................................................	22	7	0.14	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................GACCCGAAGGAGGAGATT.......................................................................	18	8	0.13	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................AACCAAACCTGCCGCTTTCTTAGC...............	24	8	0.13	1	0	1	0	0	0	0	0	0	0	0
.............................................................TACGCACG-TGCAGTGCATCCTATGGCGC............................................................................................	28	8	0.13	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................GAGACTGTTACTTACGGAACCAAACCC.............................	27	8	0.13	1	0	0	0	0	0	0	0	0	1	0
...................................................................................................................................TGTTACTTACGGAACCAAACCT.............................	22	8	0.13	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................TGTTACTTACGGAACCAAAC...............................	20	8	0.13	1	0	0	0	0	0	0	1	0	0	0
............................................................................................................................TGGAGACTGTTACTTACGGAACCAAACC..............................	28	8	0.13	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................GTTACTTACGGAACCAAACCTGCCGC........................	26	8	0.13	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................TGGAGACTGTTACTTACGGAACCAAAC...............................	27	8	0.13	1	0	0	0	0	0	0	0	0	1	0
.............................................................................................GACCCGAAGGAGGAGATTCAGGTGT................................................................	25	8	0.13	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................GGTGTTCAAGTTGGAGACT..................................................	19	8	0.13	1	0	1	0	0	0	0	0	0	0	0
.............................................................TACGCACG-TGCAGTGCATCCTATGGCG.............................................................................................	27	8	0.13	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................GAACCAAACCTGCCGCTTTCTTAGC...............	25	8	0.13	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................CAGGTGTTCAAGTTGGAGACTGTTACA............................................	27	8	0.13	1	0	0	0	0	0	0	0	1	0	0
..............................................................................................................................GAGACTGTTACTTACGGAACCAAACCTG............................	28	8	0.13	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................GACCCGAAGGAGGAGATTCAGG...................................................................	22	8	0.13	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................GAGACTGTTACTTACGGAACCAAA................................	24	9	0.11	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................GGAGATTCAGGTGTTCAAGTTGG.......................................................	23	9	0.11	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................TTGGAGACTGTTACTTACGGAACCA..................................	25	9	0.11	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................AGGAGATTCAGGTGTTCAAGTTGGAGA....................................................	27	9	0.11	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................TACGGAACCAAACCTGCCGCTTT.....................	23	9	0.11	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................TACTTACGGAACCAAACCTGCCGC........................	24	9	0.11	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................AAACCTGCCGCTTTCTTAGCAATTCG.........	26	9	0.11	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................TTGGAGACTGTTACTTACGG.......................................	20	9	0.11	1	0	0	0	0	0	0	0	0	1	0
.......................................................................................................AGGAGATTCAGGTGTTCAAGTTGGA......................................................	25	9	0.11	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................GGAGACTGTTACTTACGG.......................................	18	9	0.11	1	0	0	0	0	0	0	0	0	1	0
...................................................................................................................TGTTCAAGTTGGAGACTGTTACT............................................	23	9	0.11	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................TTGGAGACTGTTACTTACGGAAC....................................	23	9	0.11	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................GGAGATTCAGGTGTTCAAGTTG........................................................	22	9	0.11	1	0	1	0	0	0	0	0	0	0	0
..........................................TACGCGTTTCCCATCCCGATACGCACG-TG..............................................................................................................	29	9	0.11	1	0	1	0	0	0	0	0	0	0	0
................................................TTTCCCATCCCGATACGCACG-TGCA............................................................................................................	25	9	0.11	1	0	1	0	0	0	0	0	0	0	0
...............................................GTTTCCCATCCCGATACGCACG-TG..............................................................................................................	24	9	0.11	1	0	1	0	0	0	0	0	0	0	0
.............................................GCGTTTCCCATCCCGATACGCACG-TG..............................................................................................................	26	9	0.11	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................TTCAAGTTGGAGACTGTTACTT...........................................	22	9	0.11	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................ACTTACGGAACCAAACCTGC...........................	20	9	0.11	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................TTACTTACGGAACCAAACCTGCCGCTT......................	27	9	0.11	1	0	0	1	0	0	0	0	0	0	0
..............................................................................................................................GAGACTGTTACTTACGGAAC....................................	20	9	0.11	1	0	0	0	0	0	0	0	0	1	0
.....................................................................................................................................TTACTTACGGAACCAAACCTGCC..........................	23	9	0.11	1	0	1	0	0	0	0	0	0	0	0
................................................TTTCCCATCCCGATACGCACG-TGCAGT..........................................................................................................	27	9	0.11	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................GGAGACTGTTACTTACGGAACC...................................	22	9	0.11	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................TACGGAACCAAACCTGCCGCTTTC....................	24	9	0.11	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................GGAGATTCAGGTGTTCAAGTTGGA......................................................	24	9	0.11	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................TCAGGTGTTCAAGTTGGAGA....................................................	20	9	0.11	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................GGTGTTCAAGTTGGAGAC...................................................	18	9	0.11	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................TTACTTACGGAACCAAACCTGCCG.........................	24	9	0.11	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................TACGGAACCAAACCTGCCGCTTTCT...................	25	9	0.11	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................CAGGTGTTCAAGTTGGAGA....................................................	19	9	0.11	1	0	1	0	0	0	0	0	0	0	0
........................GCAAAATGTACCGCTGTGTACGCGTT....................................................................................................................................	26	10	0.10	1	0	1	0	0	0	0	0	0	0	0
.....................TCTGCAAAATGTACCGCTGTGTACGCG......................................................................................................................................	27	10	0.10	1	0	1	0	0	0	0	0	0	0	0
........................................TGTACGCGTTTCCCATCCCGATACGCA...................................................................................................................	27	10	0.10	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................AGGAGATTCAGGTGTTCAAGT..........................................................	21	10	0.10	1	0	0	0	0	0	0	1	0	0	0
..................................................TCCCATCCCGATACGCACG-TG..............................................................................................................	21	10	0.10	1	0	1	0	0	0	0	0	0	0	0
.................................................TTCCCATCCCGATACGCACG-TGCAGTG.........................................................................................................	27	10	0.10	1	0	1	0	0	0	0	0	0	0	0
.............................................GCGTTTCCCATCCCGATACGC....................................................................................................................	21	10	0.10	1	0	1	0	0	0	0	0	0	0	0
.................GATATCTGCAAAATGTACCGCTG..............................................................................................................................................	23	10	0.10	1	0	1	0	0	0	0	0	0	0	0
.........................................GTACGCGTTTCCCATCCCGATAC......................................................................................................................	23	10	0.10	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................AAGGAGGAGATTCAGGTGTTCAAGT..........................................................	25	10	0.10	1	0	1	0	0	0	0	0	0	0	0
........................................TGTACGCGTTTCCCATCCCGA.........................................................................................................................	21	10	0.10	1	0	1	0	0	0	0	0	0	0	0
.......................TGCAAAATGTACCGCTGTGTACGC.......................................................................................................................................	24	10	0.10	1	0	1	0	0	0	0	0	0	0	0
.....................TCTGCAAAATGTACCGCTGTG............................................................................................................................................	21	10	0.10	1	0	1	0	0	0	0	0	0	0	0
.................................................TTCCCATCCCGATACGCACG-TG..............................................................................................................	22	10	0.10	1	0	1	0	0	0	0	0	0	0	0
........................................TGTACGCGTTTCCCATCCCGATACG.....................................................................................................................	25	10	0.10	1	0	1	0	0	0	0	0	0	0	0
........................................TGTACGCGTTTCCCATCCCGATACGCACG-................................................................................................................	29	10	0.10	1	0	1	0	0	0	0	0	0	0	0
.................GATATCTGCAAAATGTACCGCTGT.............................................................................................................................................	24	10	0.10	1	0	1	0	0	0	0	0	0	0	0
.....................TCTGCAAAATGTACCGCTGTGT...........................................................................................................................................	22	10	0.10	1	0	0	0	1	0	0	0	0	0	0
...................................................CCCATCCCGATACGCACG-TGCAGTGC........................................................................................................	26	10	0.10	1	0	1	0	0	0	0	0	0	0	0
..................................................TCCCATCCCGATACGCACG-TGCAGTGCA.......................................................................................................	28	10	0.10	1	0	1	0	0	0	0	0	0	0	0
...............................GTACCGCTGTGTACGCGTTTCCCATC.............................................................................................................................	26	10	0.10	1	0	1	0	0	0	0	0	0	0	0
.....................................................CATCCCGATACGCACG-TGCAGTGCAT......................................................................................................	26	10	0.10	1	0	0	0	0	0	0	1	0	0	0
.....................................................CATCCCGATACGCACG-TG..............................................................................................................	18	10	0.10	1	0	1	0	0	0	0	0	0	0	0
...................................................CCCATCCCGATACGCACG-TGC.............................................................................................................	21	10	0.10	1	0	1	0	0	0	0	0	0	0	0
........................................TGTACGCGTTTCCCATCCCGATA.......................................................................................................................	23	10	0.10	1	0	1	0	0	0	0	0	0	0	0
.................GATATCTGCAAAATGTACCGCTGTG............................................................................................................................................	25	10	0.10	1	0	1	0	0	0	0	0	0	0	0
.....................TCTGCAAAATGTACCGCTGTGTACG........................................................................................................................................	25	10	0.10	1	0	1	0	0	0	0	0	0	0	0
.............................................................TACGCACG-TGCAGTGCATCCTATG................................................................................................	24	10	0.10	1	0	1	0	0	0	0	0	0	0	0
................CGATATCTGCAAAATGTACC..................................................................................................................................................	20	11	0.09	1	0	0	0	1	0	0	0	0	0	0
..........GTGTGGCGATATCTGCAAAATGTACCG.................................................................................................................................................	27	11	0.09	1	0	1	0	0	0	0	0	0	0	0
...TCGCCTTGTGTGGCGATATCTGCA...........................................................................................................................................................	24	11	0.09	1	0	1	0	0	0	0	0	0	0	0
...........TGTGGCGATATCTGCAAAATGTAC...................................................................................................................................................	24	11	0.09	1	0	1	0	0	0	0	0	0	0	0
......CCTTGTGTGGCGATATCT..............................................................................................................................................................	18	12	0.08	1	0	0	0	0	0	1	0	0	0	0
.........TGTGTGGCGATATCTGCAAAATGTA....................................................................................................................................................	25	12	0.08	1	0	1	0	0	0	0	0	0	0	0
.........TGTGTGGCGATATCTGCAAAATG......................................................................................................................................................	23	12	0.08	1	0	1	0	0	0	0	0	0	0	0
.........TGTGTGGCGATATCTGCAAAATGTAAA..................................................................................................................................................	27	12	0.08	1	0	1	0	0	0	0	0	0	0	0

droWil2

GAGTAGTTTTCAATGCCGACATCACAAAAATGTACCGCCAAATTATGGTCGATCCAATCCATACGCCAT-TTCAGAGGATCCTGTTCCGAAATAA---AGAGGGGCAACTTGGTGATTACGAGCTGAATACCGTCACGTTTGGCATTAACTGTGCTCCGTTCTTAGCCATCCGAGTACTTCA	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
.....................................................................................TCCGAAATAA---AGAGGGGCAACTTGG.....................................................................	25	20	0.55	11	0	11	0	0	0
.................................................................................................................TGATTACGAGCTGAATACCGTCACG............................................	25	20	0.25	5	0	5	0	0	0
...........................................................................................................................................................TCCGTTCTTAGCCATCCGAGTACTTC.	26	20	0.25	5	0	5	0	0	0
...TAGTTTTCAATGCCGACATCACA............................................................................................................................................................	23	20	0.25	5	0	5	0	0	0
......................................................................................................................ACGAGCTGAATACCGTCACGTTTGGC......................................	26	20	0.20	4	0	4	0	0	0
..................................................................................................................................................TAACTGTGCTCCGTTCTTAGCCA.............	23	20	0.20	4	0	2	0	2	0
.............................................................................................................TTGGTGATTACGAGCTGAATACCGT................................................	25	20	0.20	4	0	4	0	0	0
.....................TCACAAAAATGTACCGCCAAATTATGG......................................................................................................................................	27	20	0.20	4	0	4	0	0	0
.............................................................................................................TTGGTGATTACGAGCTGAATACCG.................................................	24	20	0.15	3	0	2	0	1	0
....................................................................................TTCCGAAATAA---AGAGGGGC............................................................................	19	20	0.15	3	2	1	0	0	0
...........................................................................................................................................................TCCGTTCTTAGCCATCCGAGTACTTCA	27	20	0.15	3	0	3	0	0	0
..............................................................................................................................AATACCGTCACGTTTGGCATT...................................	21	20	0.15	3	0	3	0	0	0
...TAGTTTTCAATGCCGACATCACAAAAATG......................................................................................................................................................	29	20	0.15	3	0	3	0	0	0
.............................................................TACGCCAT-TTCAGAGGATCCT...................................................................................................	21	20	0.15	3	0	0	0	3	0
........................................................................................................................GAGCTGAATACCGTCACGTTTGGCATT...................................	27	20	0.15	3	0	3	0	0	0
............................................................................................TAA---AGAGGGGCAACTTGGTGA..................................................................	21	20	0.10	2	0	1	0	0	1
..........................................................................................................AACTTGGTGATTACGAGCTGAATACCGT................................................	28	20	0.10	2	0	2	0	0	0
..........................................................................................................................................................CTCCGTTCTTAGCCATCCGAGTACT...	25	20	0.10	2	0	2	0	0	0
....................................................TCCAATCCATACGCCAT-TTCAGAGGA.......................................................................................................	26	20	0.10	2	0	1	0	1	0
..........................................................................................................AACTTGGTGATTACGAGCTG........................................................	20	20	0.10	2	2	0	0	0	0
.....................................................................................................................TACGAGCTGAATACCGTCACGTTTGGC......................................	27	20	0.10	2	0	2	0	0	0
.....................................................................................................................TACGAGCTGAATACCGTCACGTT..........................................	23	20	0.10	2	0	2	0	0	0
................................................................................................................................TACCGTCACGTTTGGCATTAACTGTGC...........................	27	20	0.10	2	0	2	0	0	0
.........................................................TCCATACGCCAT-TTCAGAGGATCCTGT.................................................................................................	27	20	0.10	2	0	0	0	2	0
..........................................................................................................................................................CTCCGTTCTTAGCCATCCGAGTA.....	23	20	0.10	2	0	2	0	0	0
............................................................................................................CTTGGTGATTACGAGCTGAAT.....................................................	21	20	0.10	2	0	2	0	0	0
...........................................................................................ATAA---AGAGGGGCAACTTGGTG...................................................................	21	20	0.10	2	0	1	0	0	1
...........................................................................................................................................TTGGCATTAACTGTGCTCCGTTCTTAGC...............	28	20	0.10	2	0	2	0	0	0
..................................................................CAT-TTCAGAGGATCCTGTTCC..............................................................................................	21	20	0.10	2	0	2	0	0	0
...............................................................CGCCAT-TTCAGAGGATCCTGT.................................................................................................	21	20	0.10	2	0	0	0	0	2
........................................................................................................................GAGCTGAATACCGTCACGTTTGGCA.....................................	25	20	0.10	2	0	2	0	0	0
..............................................................................................................................AATACCGTCACGTTTGGCA.....................................	19	20	0.10	2	0	2	0	0	0
..............................................................................................................TGGTGATTACGAGCTGAATACCGTCA..............................................	26	20	0.10	2	0	2	0	0	0
.............................................................TACGCCAT-TTCAGAGGATCCTGT.................................................................................................	23	20	0.05	1	0	0	0	1	0
.........................................................................................................CAACTTGGTGATTACGAGCTGA.......................................................	22	20	0.05	1	0	1	0	0	0
...............................................................CGCCAT-TTCAGAGGATCCTGTTC...............................................................................................	23	20	0.05	1	0	1	0	0	0
.........................................................................................................................................................GCTCCGTTCTTAGCCATCCGAGTAC....	25	20	0.05	1	0	1	0	0	0
......................................................................................................................ACGAGCTGAATACCGTCACGTTTG........................................	24	20	0.05	1	0	1	0	0	0
.............................................................................................AA---AGAGGGGCAACTTGGTGAT.................................................................	21	20	0.05	1	0	0	1	0	0
..........................................................CCATACGCCAT-TTCAGAGGAT......................................................................................................	21	20	0.05	1	0	1	0	0	0
.....................................................CCAATCCATACGCCAT-TTCAGAGGAT......................................................................................................	26	20	0.05	1	0	1	0	0	0
......................................................................................................................ACGAGCTGAATACCGTCACGTT..........................................	22	20	0.05	1	0	1	0	0	0
............................................................................................................................TGAATACCGTCACGTTTGG.......................................	19	20	0.05	1	0	0	0	0	1
............................................................................................TAA---AGAGGGGCAACTTGGTGATTACG.............................................................	26	20	0.05	1	0	0	0	1	0
................................................................................................................GTGATTACGAGCTGAATACCGTCAC.............................................	25	20	0.05	1	0	0	0	1	0
GAGTAGTTTTCAATGCCGACA.................................................................................................................................................................	21	20	0.05	1	0	1	0	0	0
.................................................................................CTGTTCCGAAATAA---AGAGGGG.............................................................................	21	20	0.05	1	0	0	0	0	1
............................AATGTACCGCCAAATTATG.......................................................................................................................................	19	20	0.05	1	0	1	0	0	0
.................................................................................................................TGATTACGAGCTGAATACCGTCA..............................................	23	20	0.05	1	0	0	0	1	0
.......................................................AATCCATACGCCAT-TTCAGAGGATCCT...................................................................................................	27	20	0.05	1	0	0	0	1	0
.............................................................................................................................GAATACCGTCACGTTTGGCAT....................................	21	20	0.05	1	0	1	0	0	0
.............................................................................................................TTGGTGATTACGAGCTGAATACC..................................................	23	20	0.05	1	0	0	1	0	0
..........................................................................................................................................................CTCCGTTCTTAGCCATCCGAG.......	21	20	0.05	1	0	1	0	0	0
...................CATCACAAAAATGTACCGCCAAATTATG.......................................................................................................................................	28	20	0.05	1	0	1	0	0	0
..............................................................................................A---AGAGGGGCAACTTGGTGATTACGAGC..........................................................	27	20	0.05	1	0	0	0	1	0
.................................................................................................................TGATTACGAGCTGAATACCGTCACGTT..........................................	27	20	0.05	1	0	0	0	1	0
...............................................................................................................................................CATTAACTGTGCTCCGTTCTTAGCCA.............	26	20	0.05	1	0	1	0	0	0
.........................................................................................................CAACTTGGTGATTACGAGCTGAATAC...................................................	26	20	0.05	1	0	1	0	0	0
...................................................ATCCAATCCATACGCCAT-TTCAGAGGA.......................................................................................................	27	20	0.05	1	0	0	0	1	0
..................................................................................................................GATTACGAGCTGAATACCGTCACGTT..........................................	26	20	0.05	1	0	1	0	0	0
.........................................................................................................................AGCTGAATACCGTCACGTTTGGC......................................	23	20	0.05	1	0	1	0	0	0
.............................................................TACGCCAT-TTCAGAGGATCCTGTTC...............................................................................................	25	20	0.05	1	0	0	0	1	0
...............................................................CGCCAT-TTCAGAGGATCCTGTTCCG.............................................................................................	25	20	0.05	1	0	1	0	0	0
........................................................................................GAAATAA---AGAGGGGCAACTTGGTGAT.................................................................	26	20	0.05	1	0	1	0	0	0
.................................................................................................................TGATTACGAGCTGAATACCGTCACGTTT.........................................	28	20	0.05	1	0	1	0	0	0
.......................................................................................................................CGAGCTGAATACCGTCACGTT..........................................	21	20	0.05	1	0	0	1	0	0
.....................................................CCAATCCATACGCCAT-TTCAGAGGA.......................................................................................................	25	20	0.05	1	0	0	0	1	0
............................................................................GGATCCTGTTCCGAAATAA---AGAGGG..............................................................................	25	20	0.05	1	0	0	0	1	0
........................................................................................................GCAACTTGGTGATTACGAGCT.........................................................	21	20	0.05	1	0	0	1	0	0
...................................................................................................................ATTACGAGCTGAATACCGTCACG............................................	23	20	0.05	1	0	1	0	0	0
........................................................................................................................GAGCTGAATACCGTCACGTTTGG.......................................	23	20	0.05	1	0	0	0	1	0
...................................................................................................................................................AACTGTGCTCCGTTCTTAGCC..............	21	20	0.05	1	0	1	0	0	0
.......................................................................................................................CGAGCTGAATACCGTCACGTTTGGCA.....................................	26	20	0.05	1	0	1	0	0	0
....................................................................T-TTCAGAGGATCCTGTTCCGAAAT.........................................................................................	24	20	0.05	1	0	1	0	0	0
........................................................................................GAAATAA---AGAGGGGCAACTTGGTG...................................................................	24	20	0.05	1	0	1	0	0	0
...........................................................................................................................................................TCCGTTCTTAGCCATCCGAGT......	21	20	0.05	1	1	0	0	0	0
...........................................................................................ATAA---AGAGGGGCAACTTGGTGT..................................................................	22	20	0.05	1	0	0	1	0	0
...........................................................CATACGCCAT-TTCAGAGGATCCTGT.................................................................................................	25	20	0.05	1	0	0	0	1	0
..............................................................................................................................AATACCGTCACGTTTGGCATTAACTG..............................	26	20	0.05	1	0	0	0	1	0
.................................................................................................................................ACCGTCACGTTTGGCATTAACTGTG............................	25	20	0.05	1	0	1	0	0	0
.............................................................................................................TTGGTGATTACGAGCTGAATA....................................................	21	20	0.05	1	0	0	0	0	1
..........CAATGCCGACATCACAAAAATGTACCG.................................................................................................................................................	27	20	0.05	1	0	1	0	0	0
................................................................................................................................................................TCTTAGCCATCCGAGTACTTC.	21	20	0.05	1	1	0	0	0	0
.................................................................................................................................................TTAACTGTGCTCCGTTCTTAGC...............	22	20	0.05	1	0	0	0	1	0
............................................................................................................................................................CCGTTCTTAGCCATCCGAGTACTTA.	25	20	0.05	1	0	1	0	0	0
..................................................................................................................................................TAACTGTGCTCCGTTCTTAGCCATC...........	25	20	0.05	1	0	1	0	0	0
...........................................................................................ATAA---AGAGGGGCAACTTGGTGA..................................................................	22	20	0.05	1	0	0	0	0	1
..............................................................................................................................AATACCGTCACGTTTGGCATTAA.................................	23	20	0.05	1	0	1	0	0	0
...................................................................................................GAGGGGCAACTTGGTGATTAC..............................................................	21	20	0.05	1	0	1	0	0	0
......................................................................TTCAGAGGATCCTGTTCCGAAATAA---AG..................................................................................	27	20	0.05	1	0	1	0	0	0
....................................................................................................................TTACGAGCTGAATACCGTCACGTT..........................................	24	20	0.05	1	0	1	0	0	0
......................................................................TTCAGAGGATCCTGTTCCGAAATAA---AGA.................................................................................	28	20	0.05	1	0	1	0	0	0
...........................................................CATACGCCAT-TTCAGAGGATCCT...................................................................................................	23	20	0.05	1	0	0	0	1	0
...................CATCACAAAAATGTACCGCCAAATTAT........................................................................................................................................	27	20	0.05	1	0	1	0	0	0
......................................................................................................................................................TGTGCTCCGTTCTTAGCCATCCGAGT......	26	20	0.05	1	0	1	0	0	0
......................................................................................................................ACGAGCTGAATACCGTCACGTTTGGCAT....................................	28	20	0.05	1	0	1	0	0	0
....................................................................................................................TTACGAGCTGAATACCGTCAC.............................................	21	20	0.05	1	0	1	0	0	0
....................................................................................................................TTACGAGCTGAATACCGTCACGTTTGGC......................................	28	20	0.05	1	0	1	0	0	0
.......................................................................................CGAAATAA---AGAGGGGCAACTT.......................................................................	21	20	0.05	1	0	1	0	0	0
.................................................................................................................TGATTACGAGCTGAATACCG.................................................	20	20	0.05	1	0	0	0	1	0
...........................................................................................ATAA---AGAGGGGCAACTTG......................................................................	18	20	0.05	1	0	1	0	0	0
....................................................................................TTCCGAAATAA---AGAGGGGCAACT........................................................................	23	20	0.05	1	0	1	0	0	0
.......................................................................................CGAAATAA---AGAGGGGCAACTTGGTGA..................................................................	26	20	0.05	1	0	1	0	0	0
............................................................................................TAA---AGAGGGGCAACTTGGTGATTACT.............................................................	26	20	0.05	1	0	0	0	1	0
.............................ATGTACCGCCAAATTATGGTC....................................................................................................................................	21	20	0.05	1	0	0	0	0	1
............................................................................................TAA---AGAGGGGCAACTTGGT....................................................................	19	20	0.05	1	0	0	1	0	0
.............................................................................GATCCTGTTCCGAAATAA---AGA.................................................................................	21	20	0.05	1	0	1	0	0	0
...........................................TATGGTCGATCCAATCCATACGCCAT-................................................................................................................	26	20	0.05	1	0	0	0	1	0
...........................................................................................................................CTGAATACCGTCACGTTTGGCATTAAC................................	27	20	0.05	1	0	1	0	0	0
....................................................................................TTCCGAAATAA---AGAGGGGCAACTT.......................................................................	24	20	0.05	1	0	1	0	0	0
.........................................................TCCATACGCCAT-TTCAGAGGATCC....................................................................................................	24	20	0.05	1	0	1	0	0	0
...........................................................................................................................................................TCCGTTCTTAGCCATCCGAGTACTT..	25	20	0.05	1	0	0	0	1	0
..........................................................................................................AACTTGGTGATTACGAGCTGAATACCG.................................................	27	20	0.05	1	0	0	0	1	0
.................................................................................................................TGATTACGAGCTGAATACCGT................................................	21	20	0.05	1	1	0	0	0	0
..........................................................................................AATAA---AGAGGGGCAACTTGGT....................................................................	21	20	0.05	1	0	1	0	0	0
................................................................................................................................................ATTAACTGTGCTCCGTTCTTAGCCATC...........	27	20	0.05	1	0	1	0	0	0
...........................................................................................................ACTTGGTGATTACGAGCTGAATACCGT................................................	27	20	0.05	1	0	1	0	0	0
.......................................................................................................................................ACGTTTGGCATTAACTGTGCTCCG.......................	24	20	0.05	1	0	1	0	0	0
.........................................................................................................................................GTTTGGCATTAACTGTGCTCC........................	21	20	0.05	1	0	1	0	0	0
....................................................................T-TTCAGAGGATCCTGTTCCGAAATAA---A...................................................................................	27	20	0.05	1	0	1	0	0	0
................................................................................................................................................ATTAACTGTGCTCCGTTCTTAGCC..............	24	20	0.05	1	0	1	0	0	0
.......TTTCAATGCCGACATCACAAA..........................................................................................................................................................	21	20	0.05	1	0	1	0	0	0
...........................................................................................................................CTGAATACCGTCACGTTTGGCATTAA.................................	26	20	0.05	1	0	1	0	0	0
.........................................................................................................................................................GCTCCGTTCTTAGCCATCCGA........	21	20	0.05	1	0	1	0	0	0
...............................................................................................................GGTGATTACGAGCTGAATACCGT................................................	23	20	0.05	1	0	1	0	0	0
...................................................ATCCAATCCATACGCCAT-TTCAGAG.........................................................................................................	25	20	0.05	1	0	1	0	0	0

droVir3

AGGTTGCCTTGTGCGGTGACGTCTGTAAGATGTACCGCTGTGTCCGAATAACGCATCCAGATCAATTTC-TGAAGTTCATCTTATGGCGTGATCACCAAAATGAAAGCATAAGGACGTACACCCTGGATACAGTAACGTATGGAACCAAACCCGCTGCGTTTCCAGCAATTCGAGCGATGCA	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
....................................................................C-TGAAGTTCATCTTATGGCGTGATC........................................................................................	25	3	3.33	10	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................C-TGAAGTTCATCTTATGGCGTGA..........................................................................................	23	3	2.00	6	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................C-TGAAGTTCATCTTATGGCGTGAT.........................................................................................	24	3	1.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................C-TGAAGTTCATCTTATGGCGTGATCA.......................................................................................	26	3	1.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................C-TGAAGTTCATCTTATGGCGTGATT........................................................................................	25	3	1.00	3	0	0	0	0	1	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................C-TGAAGTTCATCTTATGGCGTG...........................................................................................	22	3	1.00	3	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....TGCCTTGTGCGGTGACGTCTGTAAGA........................................................................................................................................................	26	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TTGCCTTGTGCGGTGACGTCTCC............................................................................................................................................................	23	2	0.50	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................GATACAGTAACGTATGGAACCA..................................	22	5	0.40	2	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................TCAATTTC-TGAAGTTCATCTT...................................................................................................	21	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................TC-TGAAGTTCATCTTATGGCGTGA..........................................................................................	24	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................C-TGAAGTTCATCTTATGGCGT............................................................................................	21	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................ATCAATTTC-TGAAGTTCATCT....................................................................................................	21	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................C-TGAAGTTCATCTTATGGC..............................................................................................	19	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................TCATCTTATGGCGTGATCACC.....................................................................................	21	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................ATTTC-TGAAGTTCATCTTATGGCGT............................................................................................	25	3	0.33	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................CAGTAACGTATGGAACCAAACCCGCT..........................	26	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................CAGTAACGTATGGAACCAAACCCGCTGC........................	28	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................CCTGGATACAGTAACGTATGGAACC...................................	25	5	0.20	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................GTAACGTATGGAACCAAACCCGC...........................	23	5	0.20	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................GTCCGAATAACGCATCCAGATCAA.....................................................................................................................	24	7	0.14	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................TGTGTCCGAATAACGCATCCAGATCA......................................................................................................................	26	7	0.14	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
........................................TGTCCGAATAACGCATCCAGATC.......................................................................................................................	23	7	0.14	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................TGTACCGCTGTGTCCGAATAACC.................................................................................................................................	23	7	0.14	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................TAAGATGTACCGCTGTGTCCGAATAAC..................................................................................................................................	27	7	0.14	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

CCATTGCACTTACAGGTGATATTAGTAAAATGTATAGGTGTGTGAAGGTTTCAGAGCCTGATGCAATGC-TTCAATGTATCTTATGGCGAAACTCATCAGACGACGACATTCTAGTCTTCAAATTGAATACCGTTACTTATGGGACCAAGCCCGCTTCTTTTTTGGCTATTCGTGCAATGCA	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
..................................................................................................................................CCGTTACTTATGGGACCAAGCCCGC...........................	25	1	5.00	5	5	0	0	0	0	0
..................................................................................................................................CCGTTACTTATGGGACCAAGCCCG............................	24	1	2.00	2	2	0	0	0	0	0
..........................................................................ATGTATCTTATGGCGAAACTCATC....................................................................................	24	10	1.90	19	18	0	0	0	1	0
...................................................................................................................................CGTTACTTATGGGACCAAGCCCG............................	23	1	1.00	1	1	0	0	0	0	0
..................................................................................................................................CCGTTACTTATGGGACCAAGCCC.............................	23	1	1.00	1	0	0	0	0	1	0
..................................................................................................................................CCGTTACTTATGGGACCAAGCCCGCTTC........................	28	1	1.00	1	1	0	0	0	0	0
..........................................................................ATGTATCTTATGGCGAAACTCATCA...................................................................................	25	10	0.90	9	9	0	0	0	0	0
..........................................................................ATGTATCTTATGGCGAAACTCATCAGA.................................................................................	27	10	0.90	9	7	0	0	0	1	1
..........................................................................ATGTATCTTATGGCGAAACTCATCAG..................................................................................	26	10	0.70	7	7	0	0	0	0	0
..................ATATTAGTAAAATGTATAGGTGTG............................................................................................................................................	24	8	0.50	4	3	1	0	0	0	0
..........................................................................ATGTATCTTATGGCGAAACTCAT.....................................................................................	23	10	0.50	5	5	0	0	0	0	0
..................ATATTAGTAAAATGTATAGGTGTGT...........................................................................................................................................	25	8	0.38	3	2	0	0	0	0	1
..................ATATTAGTAAAATGTATAGGTGT.............................................................................................................................................	23	8	0.25	2	2	0	0	0	0	0
..........................................................................ATGTATCTTATGGCGAAACTCA......................................................................................	22	10	0.20	2	2	0	0	0	0	0
..........TACAGGTGATATTAGTAAAAT.......................................................................................................................................................	21	8	0.13	1	0	0	0	0	1	0
...................TATTAGTAAAATGTATAGGTGTGT...........................................................................................................................................	24	8	0.13	1	1	0	0	0	0	0
.................GATATTAGTAAAATGTATAGGTGTGTGA.........................................................................................................................................	28	8	0.13	1	0	0	0	0	0	1
..............GGTGATATTAGTAAAATGTATAGGTGT.............................................................................................................................................	27	8	0.13	1	1	0	0	0	0	0
.................GATATTAGTAAAATGTATAGGTGTGTC..........................................................................................................................................	27	8	0.13	1	0	0	0	0	0	1
................................................TTTCAGAGCCTGATGCAATGC-TT..............................................................................................................	23	9	0.11	1	1	0	0	0	0	0
.............................................AGGTTTCAGAGCCTGATGCAATGC-TT..............................................................................................................	26	9	0.11	1	0	0	0	0	1	0
.........................TAAAATGTATAGGTGTGTGA.........................................................................................................................................	20	9	0.11	1	0	1	0	0	0	0
..............................TGTATAGGTGTGTGAAGGTTTCAGA...............................................................................................................................	25	9	0.11	1	1	0	0	0	0	0
...........................................................................TGTATCTTATGGCGAAACTCAT.....................................................................................	22	10	0.10	1	1	0	0	0	0	0
...........................................................................TGTATCTTATGGCGAAACTCATCA...................................................................................	24	10	0.10	1	1	0	0	0	0	0
...........................................................................TGTATCTTATGGCGAAACTCATCAG..................................................................................	25	10	0.10	1	1	0	0	0	0	0
..........................................................................ATGTATCTTATGGCGAAACTCATCAGC.................................................................................	27	10	0.10	1	1	0	0	0	0	0
..........................................................................ATGTATCTTATGGCGAAACTCATCATT.................................................................................	27	10	0.10	1	1	0	0	0	0	0
........................................................................CAATGTATCTTATGGCGAAAC.........................................................................................	21	10	0.10	1	0	0	0	1	0	0
............................................................................GTATCTTATGGCGAAACTCATCAGAC................................................................................	26	10	0.10	1	1	0	0	0	0	0
..........................................................................ATGTATCTTATGGCGAAACTCATCAT..................................................................................	26	10	0.10	1	1	0	0	0	0	0
..........................................................................ATGTATCTTATGGCGAAACTCATCAGAC................................................................................	28	10	0.10	1	0	0	0	0	1	0
...........................................................................TGTATCTTATGGCGAAACTCATC....................................................................................	23	10	0.10	1	1	0	0	0	0	0
..........................................................................ATGTATCTTATGGCGAAACTC.......................................................................................	21	10	0.10	1	1	0	0	0	0	0
.........................................................................................AAACTCATCAGACGACGACATTCTAGC..................................................................	27	10	0.10	1	1	0	0	0	0	0
...........................................................................TGTATCTTATGGCGAAACTCATCAGA.................................................................................	26	10	0.10	1	1	0	0	0	0	0
........................................................................CAATGTATCTTATGGCGAAACTC.......................................................................................	23	10	0.10	1	1	0	0	0	0	0
..............................................................................ATCTTATGGCGAAACTCATCAGACGAC.............................................................................	27	11	0.09	1	1	0	0	0	0	0
............................................................................................................................................................TCTTTTTTGGCTATTCGTGCAATGCA	26	14	0.07	1	1	0	0	0	0	0

droGri2

CTGTTGCTCTGACTGGGGATATATTCAAAATGTACCGTTGCGTTCGAGTGTCTGCTCCTGACAACTATT-ATCAATGCATTTTGTGGAGAGACTCACCCAAAGAAAGGGTACGTGTCTACAAGCTGGACACCGTGGCTTATGGCACCAAACCAGGCTCATTTTTGGCCATACGCTCCATGCA	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

droAna3

GAGTGGCCATTACAGGAGATATTTGCAAAATGTACCGATGCGTCAGAGTTTTCCCCGAGCTCAGCTATC-TGCAGTGCATTCTGTGGCGGAATTCCACCCAGGATGAGTTGCAGGTTTTTAAACTGGATACGGTCACTTATGGGACCAAAACGGCCTCATTTTTAGCAATTCGAGCAATGCA	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
................................TACCGATGCGTCAGAGTTTTCCCCGAGC..........................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
.........................................GTCAGAGTTTTCCCCGAGCTCAGCTATC-................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
...........................................................................TGCATTCTGTGGCGGAATTCCACCCAGG...............................................................................	28	1	1.00	1	1	0	0	0	0	0
...............................................................GCTATC-TGCAGTGCATTCTGTGGCGG............................................................................................	26	1	1.00	1	1	0	0	0	0	0
..................................................................................TGTGGCGGAATTCCACCCAGGATGA...........................................................................	25	1	1.00	1	0	1	0	0	0	0
...........................................................................TGCATTCTGTGGCGGAATTCCACC...................................................................................	24	1	1.00	1	1	0	0	0	0	0
.......................................................................................................................TAAACTGGATACGGTCACTTATGGGACC...................................	28	2	0.50	1	1	0	0	0	0	0
.......................................................................................................................TAAACTGGATACGGTCACTTATGGGA.....................................	26	20	0.20	4	0	4	0	0	0	0
.......................................................................................................................TAAACTGGATACGGTCACTTATGG.......................................	24	20	0.15	3	3	0	0	0	0	0
.............................................................................................................TGCAGGTTTTTAAACTGGATACGGT................................................	25	20	0.10	2	2	0	0	0	0	0
...................TATTTGCAAAATGTACCGATGCGTCA.........................................................................................................................................	26	20	0.05	1	1	0	0	0	0	0
..............................TGTACCGATGCGTCAGAGTTTTCCCC..............................................................................................................................	26	20	0.05	1	1	0	0	0	0	0
..............................TGTACCGATGCGTCAGAGTTTTCCCCG.............................................................................................................................	27	20	0.05	1	1	0	0	0	0	0
..........TACAGGAGATATTTGCAAAATGTACCGC................................................................................................................................................	28	20	0.05	1	0	0	1	0	0	0
.......................................................................................................................TAAACTGGATACGGTCACTTATGGGAA....................................	27	20	0.05	1	1	0	0	0	0	0
..................................CCGATGCGTCAGAGTTTTCCCCGAG...........................................................................................................................	25	20	0.05	1	0	1	0	0	0	0
............................................................................................TTCCACCCAGGATGAGTTGCAGGT..................................................................	24	20	0.05	1	0	1	0	0	0	0
........................................................................................................................AAACTGGATACGGTCACTTATGGGAC....................................	26	20	0.05	1	1	0	0	0	0	0
...................................CGATGCGTCAGAGTTTTCCCCGAG...........................................................................................................................	24	20	0.05	1	1	0	0	0	0	0

droBip1

GGGTGGCCATTACTGGAGATATTTGTAAAATGTATCGTTGCGTCAGGGTTTTTCCTGAGGACAGCTATC-TTCAGTGTATTCTTTGGCGGGATTCCACCCAGGATGAGTTACAGGTTTTTAAGCTGGACACGGTCACTTACGGAACGAAGCCTGCCTCATTTTTAGCAGTTCGGACAATGCA	Size	Hit Count	Total Norm	Total
No Reads

droKik1

AGGTAGCCTTGTGTGGAGATATTTGCAAAATGTATCGCTGCGTTCGGGTTACGCATCCCCATCAGTTTC-TGCAATGTATTCTATGGCGCGATCGGCCAGAAGACGAGATTCAAGTTTACTCGCTTGACACCGTAACCTATGGCACGAAGCCTGCTGC-TTTTTGGCAATTCGTGCAATGCA	Size	Hit Count	Total Norm	Total
No Reads

droFic1

T-GTTGCATTGACTGGTGACGTCTGCAAGATGTATCGGTGTGTTCGCGTGGCTGAACCCGATAGCTACT-TCCAATGTATTCTTTGGCGTGACTCACCGGACCAGGAAGTGCAGGTATTCAAGCTGGATACCGTGACTTATGGAACCAAGCCTGCAGCCTTTTTACCCGTTCGAACGATGCA	Size	Hit Count	Total Norm	Total
No Reads

droEle1

AAGCGCCCTT--GCGGCGATATTTGCAAAATGTATCGTTGAGTACACGTTTCTCACCCTGATCAGTACC-TGCAGTGCATTTTATGGCGTCCCGATCCTAAGGAAAGGTTTCAGATTTTCAAACTA-AAACAGTGACGTACGGAACGAAACCCGCTGCGTTTTTGGCAATTCGTGCCATGCA	Size	Hit Count	Total Norm	Total
No Reads

droRho1

GAGTTGCTATGTGCGGCGATATTTGCAAGATGTATCGCTGTGTGCGAGTAACTCACCCAGATCAATTTCTTTCAGTGCATCCTATGGCGCGATCATCCCGATGAAGAAATAAAGACATACACGTTGGATACCGTAACGTACGGAACCAAGCCCGCTGCCTTTCTAGCAATTCGAGCAATGCA	Size	Hit Count	Total Norm	Total
No Reads

droBia1

AGGTTGCTTTGTGTGGAGATATTTGCAAAATGTTTCGCTGCGTTCGGGTTACGCATCCCCATCAGTTTC-TGCAATG-ATTTTATGGCGCGATCGGCCAGAAGACGAGGTTCAAGTTTACTCTCTTGACACCGTAACCTATGGCACGAAGCCTGCTGCTTTTTTGGCAATTCGTGCAATGCA	Size	Hit Count	Total Norm	Total
No Reads

droTak1

AGGTTGCTTTGTGTGGGGATATTTGCAAAATGTATCGCTGCGTTCGGGTTACGCATCCCCATCAGTTTC-TGCAATGTATTTTATGGCGCGATCGGCCAGAAGACGAGGTTCAAGTTTACTCGCTTGACACCGTAACCTATGGCACGAAGCCTGCTGCTTTTTTGGCAATTCGTGCAATGCA	Size	Hit Count	Total Norm	Total
No Reads

droEug1

AAGTTGCACTGTGCGGAGACGTCTGCAAAATGTGTCGTTGTGTTCGTATCTCTCATCCCAACCAGTTTC-TTTAATGTATTATATGGCGCAATAGGCCGGAAGACCAAATTCAAGTATACTCGCTTGACACCGTTACGTACGGCACTAAGCCAACTGCCTATTTGGCCATTCGTGCAATGCA	Size	Hit Count	Total Norm	Total
No Reads

dm3

CAGTTGCCATTACAGGAGACATATGTAAAATGTACCGATGTGTAAGGGTCTCGCAAGAAGATAGCTATT-TGGAGTGCATTGTATGGAGGGACTCCCCGATCGATGACCTTCAAGTATACAAACTCGACACAGTTACCTACGGCACCAAACCAGCCTCCTTCTTGTCCGTAAGGGCTATGCA	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
......................................TGTGTAAGGGTCTCGCAAGAAGATAGC.....................................................................................................................	27	14	30.21	423	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	3	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	2	0	0	7	0	0	0	2	0	0	0	7	0	3	2	0	2	6	1	2	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	7	0	1	0	0	0	0	10	4	4	1	0	3	0	2	0	1	1	5	0	17	0	0	0	7	0	4	20	17	0	4	0	14	23	18	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	12	0	0	1	0	1	3	14	10	37	0	0	0	0	0	0	59	4	21	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	11	19	8	0	0	0	0	0	0
....................................................................T-TGGAGTGCATTGTATGGAGGGACTC.......................................................................................	26	3	18.67	56	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	3	0	0	0	0	1	0	0	0	2	0	2	0	0	0	0	0	6	0	0	0	0	0	0	0	0	1	3	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	3	7	0	0	0	0	0	0	7	2	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0
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.............................................................TAGCTATT-TGGAGTGCATTGTATGGAGA............................................................................................	28	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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........................................................................GAGTGCATTGTATGGAGGGAC.........................................................................................	21	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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............................................................ATAGCTATT-TGGAGTGCATTGTATGGA..............................................................................................	27	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................AGATAGCTATT-TGGAGTGCAT......................................................................................................	21	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................GAGTGCATTGTATGGAGGGACTCCCC....................................................................................	26	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................T-TGGAGTGCATTGTATGGAGGGATA........................................................................................	25	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................TCCCCGATCGATGACCTTCAAGTAT................................................................	25	12	0.33	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................T-TGGAGTGCATTGTATGGAGGGA..........................................................................................	23	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................TCGCAAGAAGATAGCTATT-TGGAGA..........................................................................................................	25	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................GAAGATAGCTATT-TGGAGTGCATTGTA..................................................................................................	27	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSim2

CAGTTGCCGTTACTGGAGACATATGTAAAATGTACTGATGTGTAAGGGTCTCGCAAGAAGATAGCTATT-TGCAGTGCATTGTATGGAGGGACTCCCCGATCGATGACCTTCAAGTATACAAACTCGACACAGTTACCTACGGCACCAAACCAGCCTCCTTCTTGTCCGTAAGGGCTATGCA	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
.....................................................................................................................TACAAACTCGACACAGTTACCTACGGC......................................	27	6	1626.67	9760	0	0	81	24	0	0	4314	1351	3506	304	0	1	159	20	0	0	0
.....................................................................................................................TACAAACTCGACACAGTTACCTACGGCA.....................................	28	6	541.00	3246	0	0	1	5	0	0	1722	467	885	63	0	0	93	10	0	0	0
....................................................................................TGGAGGGACTCCCCGATCGATGACCTT.......................................................................	27	5	470.60	2353	0	0	0	15	0	0	644	55	1340	207	57	0	30	5	0	0	0
....................................................................................TGGAGGGACTCCCCGATCGATGACC.........................................................................	25	5	346.00	1730	0	0	0	3	0	0	557	61	965	121	17	0	6	0	0	0	0
.....................................................................................................................TACAAACTCGACACAGTTACCTACGG.......................................	26	6	304.50	1827	0	0	3	7	0	0	630	202	755	70	0	1	119	40	0	0	0
.....................................................................................................................TACAAACTCGACACAGTTACCTACGGCACC...................................	30	6	296.00	1776	0	0	0	0	0	0	1073	292	402	4	0	0	3	2	0	0	0
....................................................................................TGGAGGGACTCCCCGATCGATGACCT........................................................................	26	5	201.00	1005	0	1	0	0	0	0	525	43	361	44	31	0	0	0	0	0	0
....................................................................................................................ATACAAACTCGACACAGTTACCTACGGC......................................	28	6	159.67	958	0	0	0	1	0	0	37	511	55	354	0	0	0	0	0	0	0
....................................................................................TGGAGGGACTCCCCGATCGATGAC..........................................................................	24	5	122.60	613	0	0	0	0	0	0	186	23	335	58	6	0	4	1	0	0	0
.....................................................................................................................TACAAACTCGACACAGTTACCTACGGCAC....................................	29	6	105.67	634	1	0	26	6	0	0	242	88	182	12	0	0	70	7	0	0	0
.............................................................TAGCTATT-TGCAGTGCATTGTATGGA..............................................................................................	26	8	102.88	823	0	0	0	1	0	0	229	224	235	124	10	0	0	0	0	0	0
.....................................................................................................................TACAAACTCGACACAGTTACCTACGGCACCA..................................	31	6	85.33	512	0	0	0	0	0	0	412	44	55	1	0	0	0	0	0	0	0
....................................................................................................................ATACAAACTCGACACAGTTACCTACGG.......................................	27	6	82.00	492	0	0	0	0	0	0	18	194	44	233	0	0	3	0	0	0	0
....................................................................................................................ATACAAACTCGACACAGTTACCTA..........................................	24	6	74.17	445	0	0	0	0	0	0	12	170	58	205	0	0	0	0	0	0	0
..........................................................AGATAGCTATT-TGCAGTGCATTGTA..................................................................................................	25	8	72.63	581	0	0	0	18	0	0	169	89	164	59	61	2	19	0	0	0	0
.............................................................................................TCCCCGATCGATGACCTTCAAGT..................................................................	23	5	63.60	318	0	0	0	0	0	0	126	77	78	29	0	0	6	2	0	0	0
.....................................................................................................................TACAAACTCGACACAGTTACCTA..........................................	23	6	51.67	310	0	0	2	0	0	0	103	20	170	11	0	0	2	2	0	0	0
.....................................................................................................................TACAAACTCGACACAGTTACCTACG........................................	25	6	43.83	263	0	0	0	0	20	0	107	32	87	14	1	0	2	0	0	0	0
....................................................................................................................ATACAAACTCGACACAGTTACCTACGGCA.....................................	29	6	39.67	238	0	0	0	0	0	0	14	183	8	33	0	0	0	0	0	0	0
.................................................................TATT-TGCAGTGCATTGTATGGAGGGA..........................................................................................	26	7	38.71	271	0	0	0	0	0	0	38	139	38	55	1	0	0	0	0	0	0
.....................................................................................................................TACAAACTCGACACAGTTACCTAC.........................................	24	6	28.50	171	0	0	5	2	40	0	38	10	62	13	0	0	1	0	0	0	0
................................................................................................................................................ACCAAACCAGCCTCCTTCTTGTCCGTA...........	27	5	28.40	142	0	0	0	1	0	0	54	18	55	12	1	0	1	0	0	0	0
....................................................................................................................ATACAAACTCGACACAGTTACCTAC.........................................	25	6	20.50	123	0	0	1	0	0	0	3	41	7	70	0	0	1	0	0	0	0
....................................................................................TGGAGGGACTCCCCGATCGATGA...........................................................................	23	5	20.20	101	0	0	0	0	0	0	25	2	67	7	0	0	0	0	0	0	0
.....................................................................................................................TACAAACTCGACACAGTTA..............................................	19	6	15.33	92	0	0	0	0	11	0	61	17	3	0	0	0	0	0	0	0	0
.............................................................................................TCCCCGATCGATGACCTTCAAGTA.................................................................	24	5	13.60	68	0	0	0	0	0	0	28	4	18	3	2	0	8	5	0	0	0
..........................................................AGATAGCTATT-TGCAGTGCATTGT...................................................................................................	24	8	12.75	102	0	0	0	3	16	0	5	2	7	6	60	1	2	0	0	0	0
....................................................................................................................ATACAAACTCGACACAGTTACCTACG........................................	26	6	12.67	76	0	0	0	0	0	0	2	34	2	38	0	0	0	0	0	0	0
.....................TATGTAAAATGTACTGATGTGTAAGGGTC....................................................................................................................................	29	1	12.00	12	0	0	0	0	0	0	6	0	6	0	0	0	0	0	0	0	0
....................................................................................TGGAGGGACTCCCCGATCGATGACCTTC......................................................................	28	4	10.75	43	0	0	0	3	0	0	9	1	15	1	12	0	2	0	0	0	0
..........................................................AGATAGCTATT-TGCAGTGCATTGTATGGA..............................................................................................	29	8	10.00	80	0	0	0	0	0	0	38	34	7	1	0	0	0	0	0	0	0
.....................TATGTAAAATGTACTGATGTGTAAGGG......................................................................................................................................	27	1	10.00	10	0	0	0	0	0	0	5	0	2	2	1	0	0	0	0	0	0
.....................TATGTAAAATGTACTGATGTGTAAGGGT.....................................................................................................................................	28	1	10.00	10	0	0	0	0	0	0	5	1	4	0	0	0	0	0	0	0	0
.......................................................................................AGGGACTCCCCGATCGATGACCTTCAAGT..................................................................	29	4	9.00	36	0	0	0	0	0	0	25	4	3	4	0	0	0	0	0	0	0
...................................................................................................................TATACAAACTCGACACAGTTACCTACGGC......................................	29	6	9.00	54	0	0	0	0	0	0	9	12	23	10	0	0	0	0	0	0	0
....................................................................................TGGAGGGACTCCCCGATCGATG............................................................................	22	5	9.00	45	0	0	0	0	0	0	14	0	22	8	1	0	0	0	0	0	0
.....................................................................................................................TACAAACTCGACACAGTTACCTACGGCACCAA.................................	32	6	8.67	52	0	0	0	0	0	0	43	8	0	0	0	0	1	0	0	0	0
.......................TGTAAAATGTACTGATGTGTAAGGGT.....................................................................................................................................	26	1	8.00	8	0	0	0	0	0	0	2	0	5	1	0	0	0	0	0	0	0
......................................................................TGCAGTGCATTGTATGGAGGGACTC.......................................................................................	25	7	7.57	53	0	0	0	0	0	0	13	3	32	3	0	0	2	0	0	0	0
...................................................................................ATGGAGGGACTCCCCGATCGATGACC.........................................................................	26	5	7.00	35	0	0	0	0	0	0	17	2	13	3	0	0	0	0	0	0	0
.....................................................................................................................TACAAACTCGACACAGTTACC............................................	21	6	7.00	42	0	0	0	0	40	0	1	1	0	0	0	0	0	0	0	0	0
...........................................................................TGCATTGTATGGAGGGACTCCCCGAT.................................................................................	26	7	6.86	48	0	0	0	0	0	0	12	0	29	4	3	0	0	0	0	0	0
...............................................................................TTGTATGGAGGGACTCCCCGATCGA..............................................................................	25	5	6.40	32	0	0	0	0	0	0	4	0	24	2	2	0	0	0	0	0	0
..................................................................................................................................................CAAACCAGCCTCCTTCTTGTCCGTA...........	25	5	6.20	31	0	0	0	0	0	0	12	3	9	5	2	0	0	0	0	0	0
.........................................................................AGTGCATTGTATGGAGGGACTCCCCGAT.................................................................................	28	7	6.00	42	0	0	0	0	0	0	21	5	14	2	0	0	0	0	0	0	0
..................................................................................TATGGAGGGACTCCCCGATCGATGACC.........................................................................	27	5	6.00	30	0	0	0	0	0	0	13	0	13	3	0	0	1	0	0	0	0
....................................................................................TGGAGGGACTCCCCGATCGATGACCTA.......................................................................	27	5	6.00	30	0	0	0	0	0	0	6	1	22	0	1	0	0	0	0	0	0
..........................................................AGATAGCTATT-TGCAGTGCATTG....................................................................................................	23	8	5.88	47	0	0	0	0	0	0	0	0	0	0	31	1	10	5	0	0	0
..........................................................AGATAGCTATT-TGCAGTGCAT......................................................................................................	21	8	5.63	45	0	0	0	0	40	0	0	0	0	0	5	0	0	0	0	0	0
.............................................................................................TCCCCGATCGATGACCTTCAAG...................................................................	22	5	5.60	28	0	0	0	0	0	0	7	8	8	2	0	0	3	0	0	0	0
.................................................................TATT-TGCAGTGCATTGTATGGAGGGAA.........................................................................................	27	7	5.57	39	0	0	0	0	0	0	0	14	3	22	0	0	0	0	0	0	0
.....................................................................................................................TACAAACTCGACACAGTTACCTACGGCAA....................................	29	6	5.50	33	0	0	0	0	0	0	18	5	7	0	0	0	3	0	0	0	0
................................................................CTATT-TGCAGTGCATTGTATGGAGGGA..........................................................................................	27	7	4.57	32	0	0	0	0	0	0	10	9	5	8	0	0	0	0	0	0	0
................................................................................TGTATGGAGGGACTCCCCGATCGATG............................................................................	26	5	4.40	22	0	0	0	0	0	0	4	0	16	2	0	0	0	0	0	0	0
.................................................................................................................................................CCAAACCAGCCTCCTTCTTGTCCGTA...........	26	5	4.40	22	0	0	0	0	0	0	8	6	4	2	2	0	0	0	0	0	0
.....................................................................................................................TACAAACTCGACACAGTTAC.............................................	20	6	4.33	26	0	0	0	0	11	11	1	1	2	0	0	0	0	0	0	0	0
.....................................................................................................................TACAAACTCGACACAGTTACCTACGGT......................................	27	6	4.33	26	0	0	0	0	0	0	4	5	7	3	0	0	2	5	0	0	0
.............................................................................................TCCCCGATCGATGACCTTCAAGTAT................................................................	25	5	4.20	21	0	0	0	0	0	0	5	1	11	1	0	0	2	1	0	0	0
...................................................................................................................................................AAACCAGCCTCCTTCTTGTCCGTA...........	24	5	4.20	21	0	0	0	0	0	0	3	2	9	2	5	0	0	0	0	0	0
.............................................................TAGCTATT-TGCAGTGCATTGTATGGAGGGA..........................................................................................	30	7	4.14	29	0	0	0	0	0	0	5	19	4	1	0	0	0	0	0	0	0
.......CGTTACTGGAGACATATGTAAAATG......................................................................................................................................................	25	1	4.00	4	0	0	0	0	0	0	0	2	0	2	0	0	0	0	0	0	0
...............................................................................................................CAAGTATACAAACTCGACACAGTTACC............................................	27	6	4.00	24	0	0	0	1	0	0	3	3	5	11	0	0	1	0	0	0	0
.......................TGTAAAATGTACTGATGTGTAAGGG......................................................................................................................................	25	1	4.00	4	0	0	0	0	0	0	2	0	2	0	0	0	0	0	0	0	0
............................................................................................................................TCGACACAGTTACCTACGGCACCAAACC..............................	28	6	3.83	23	0	0	0	0	0	0	3	7	8	3	0	0	2	0	0	0	0
...............................................................................TTGTATGGAGGGACTCCCCGATCGATG............................................................................	27	5	3.80	19	0	0	0	0	0	0	5	0	14	0	0	0	0	0	0	0	0
.......................................................................................AGGGACTCCCCGATCGATGACCTTC......................................................................	25	4	3.75	15	0	0	0	0	0	0	0	0	0	0	0	0	15	0	0	0	0
....................................................................................................................ATACAAACTCGACACAGTTACCTACGGCAC....................................	30	6	3.67	22	0	0	0	0	0	0	0	18	2	2	0	0	0	0	0	0	0
.............................................................TAGCTATT-TGCAGTGCATTGTATGG...............................................................................................	25	8	3.63	29	0	0	0	0	0	0	4	10	10	5	0	0	0	0	0	0	0
...................................................................................................................TATACAAACTCGACACAGTTACCTACGG.......................................	28	6	3.33	20	0	0	0	0	0	0	4	4	2	10	0	0	0	0	0	0	0
..........................................................AGATAGCTATT-TGCAGT..........................................................................................................	17	9	3.33	30	0	0	0	0	0	0	0	0	0	0	30	0	0	0	0	0	0
.....................................................................................................................TACAAACTCGACACAGTTACCTACGGA......................................	27	6	3.33	20	0	0	0	0	0	0	10	5	1	1	0	0	3	0	0	0	0
...................................................................................................................TATACAAACTCGACACAGTTACCTA..........................................	25	6	3.33	20	0	0	0	0	0	0	3	4	7	6	0	0	0	0	0	0	0
......................................................................TGCAGTGCATTGTATGGAGGGACTCCC.....................................................................................	27	7	3.29	23	0	0	0	0	0	0	9	3	9	2	0	0	0	0	0	0	0
.....................................................................................GGAGGGACTCCCCGATCGATGACCTT.......................................................................	26	5	3.20	16	0	0	0	0	0	0	5	1	4	2	2	0	2	0	0	0	0
....................................................................................TGGAGGGACTCCCCGATCGATGAA..........................................................................	24	5	3.20	16	0	0	0	0	0	0	6	0	8	1	1	0	0	0	0	0	0
.....................................................................................................................TACAAACTCGACACAGTTACCTACGGCT.....................................	28	6	3.17	19	0	0	2	0	0	0	11	1	2	0	0	0	2	1	0	0	0
.................................................................TATT-TGCAGTGCATTGTATGGAGGGAC.........................................................................................	27	7	3.14	22	0	0	3	1	0	0	3	1	9	4	0	0	1	0	0	0	0
....................................................................................TGGAGGGACTCCCCGATCGATGACA.........................................................................	25	5	3.00	15	0	0	0	0	0	0	5	0	4	2	0	0	4	0	0	0	0
..............................TGTACTGATGTGTAAGGGTCTCGCAAGT............................................................................................................................	28	1	3.00	3	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0
..........TACTGGAGACATATGTAAAATGTAC...................................................................................................................................................	25	1	3.00	3	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0
.......................TGTAAAATGTACTGATGTGTAAGGGTCT...................................................................................................................................	28	1	3.00	3	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0
.........................................................................AGTGCATTGTATGGAGGGACTCCCCGA..................................................................................	27	7	2.86	20	0	0	0	0	0	0	8	3	7	0	1	0	1	0	0	0	0
....................................................................................................................ATACAAACTCGACACAGTTACCT...........................................	23	6	2.67	16	0	0	0	0	0	0	1	2	2	11	0	0	0	0	0	0	0
................................................................................TGTATGGAGGGACTCCCCGATCGATGACC.........................................................................	29	5	2.60	13	0	0	0	0	0	0	4	0	9	0	0	0	0	0	0	0	0
.............................................................................................TCCCCGATCGATGACCTTCAAGTAA................................................................	25	5	2.60	13	0	0	0	0	0	0	3	0	0	1	0	0	9	0	0	0	0
..................................................................................................................GTATACAAACTCGACACAGTTACCTA..........................................	26	6	2.50	15	0	0	0	0	0	0	1	1	8	5	0	0	0	0	0	0	0
.............................................................TAGCTATT-TGCAGTGCATTGTATGGAGGG...........................................................................................	29	8	2.50	20	0	0	0	0	0	0	4	11	5	0	0	0	0	0	0	0	0
...............................................................................................................CAAGTATACAAACTCGACACAGTT...............................................	24	6	2.50	15	0	0	0	0	0	0	3	3	3	6	0	0	0	0	0	0	0
...............................................................................................CCCGATCGATGACCTTCAAGTATACAAACT.........................................................	30	5	2.40	12	0	0	0	0	0	0	4	8	0	0	0	0	0	0	0	0	0
................................................................................................................................................ACCAAACCAGCCTCCTTCTTGTCCGT............	26	5	2.40	12	0	0	0	0	0	0	1	4	7	0	0	0	0	0	0	0	0
.............................................................................................................TTCAAGTATACAAACTCGACACAGT................................................	25	6	2.33	14	0	0	0	0	0	0	0	1	6	5	2	0	0	0	0	0	0
....................................................................................................................ATACAAACTCGACACAGTTACCTACGGCACC...................................	31	6	2.33	14	0	0	0	0	0	0	0	10	4	0	0	0	0	0	0	0	0
......................................................................TGCAGTGCATTGTATGGAGGGACTCCCCGA..................................................................................	30	7	2.29	16	0	0	0	0	0	0	7	0	6	2	0	0	1	0	0	0	0
......................................................................TGCAGTGCATTGTATGGAGGGACT........................................................................................	24	7	2.29	16	0	0	0	0	0	0	4	1	9	1	0	0	1	0	0	0	0
................................................................................................................AAGTATACAAACTCGACACAGTTACC............................................	26	6	2.17	13	0	0	0	0	0	0	3	1	3	2	0	0	4	0	0	0	0
....................................................................T-TGCAGTGCATTGTATGGAGGGACTC.......................................................................................	26	7	2.14	15	0	0	0	0	0	0	6	2	6	1	0	0	0	0	0	0	0
...........................................................................TGCATTGTATGGAGGGACTCCCCGA..................................................................................	25	7	2.14	15	0	0	0	0	0	0	4	1	8	2	0	0	0	0	0	0	0
.............................................................TAGCTATT-TGCAGTGCATTGTA..................................................................................................	22	8	2.13	17	0	0	0	0	0	0	2	3	8	3	1	0	0	0	0	0	0
.......................TGTAAAATGTACTGATGTGTAAGGGTC....................................................................................................................................	27	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0
....TGCCGTTACTGGAGACATATGTAAAA........................................................................................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0
.......................................................................................AGGGACTCCCCGATCGATGACCTT.......................................................................	24	5	2.00	10	0	0	0	0	0	0	0	0	1	0	0	0	9	0	0	0	0
........................................................................................GGGACTCCCCGATCGATGACCTTCAAGT..................................................................	28	4	2.00	8	0	0	0	0	0	0	7	1	0	0	0	0	0	0	0	0	0
..............................TGTACTGATGTGTAAGGGTCTCGC................................................................................................................................	24	1	2.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
...................................................................................ATGGAGGGACTCCCCGATCGATGACCTT.......................................................................	28	5	2.00	10	0	0	0	0	0	0	6	0	4	0	0	0	0	0	0	0	0
..............................TGTACTGATGTGTAAGGGTCTCGCAA..............................................................................................................................	26	1	2.00	2	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0
...................................TGATGTGTAAGGGTCTCGCAAGAAGA.........................................................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
.............TGGAGACATATGTAAAATGTACTGATG..............................................................................................................................................	27	1	2.00	2	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0
..........................................................AGATAGCTATT-TGCAGTGCATT.....................................................................................................	22	8	2.00	16	0	0	0	0	10	0	0	0	0	0	3	0	3	0	0	0	0
.............................................................................................TCCCCGATCGATGACCTTCAA....................................................................	21	5	1.80	9	0	0	0	0	0	0	2	0	3	1	0	0	3	0	0	0	0
....................................................................................................................................................AACCAGCCTCCTTCTTGTCCGTAAGGG.......	27	5	1.80	9	0	0	0	0	0	0	5	0	3	0	1	0	0	0	0	0	0
......................................................................................................................................TACCTACGGCACCAAACCAGCCTCC.......................	25	6	1.67	10	0	0	0	0	9	0	0	1	0	0	0	0	0	0	0	0	0
.............................................................................................................TTCAAGTATACAAACTCGACACAGTT...............................................	26	6	1.67	10	0	0	1	0	0	0	0	0	1	6	0	0	2	0	0	0	0
................................................................................................................AAGTATACAAACTCGACACAGTT...............................................	23	6	1.67	10	0	0	0	0	0	0	3	1	3	2	0	0	1	0	0	0	0
....................................................................................................................................................AACCAGCCTCCTTCTTGTCCGTAAGGGC......	28	5	1.60	8	0	0	0	0	0	0	3	0	2	0	3	0	0	0	0	0	0
....................................................................................................TCGATGACCTTCAAGTATACAAACTCGA......................................................	28	5	1.60	8	0	0	0	0	0	0	0	1	3	4	0	0	0	0	0	0	0
.............................................................................................TCCCCGATCGATGACCTTCAAGTATA...............................................................	26	5	1.60	8	0	0	0	0	0	0	3	3	0	1	0	0	1	0	0	0	0
......................................TGTGTAAGGGTCTCGCAAGA............................................................................................................................	20	6	1.50	9	0	0	0	0	0	0	1	2	0	0	4	1	1	0	0	0	0
.....................................................................................................................TACAAACTCGACACAGTTACCT...........................................	22	6	1.50	9	0	0	0	0	0	0	4	2	1	0	0	0	1	1	0	0	0
........................................................................................................................................................AGCCTCCTTCTTGTCCGTAAGGGCTA....	26	8	1.50	12	0	0	0	0	0	0	0	0	0	0	12	0	0	0	0	0	0
..........................................................................................GACTCCCCGATCGATGACCTTCAAGT..................................................................	26	4	1.50	6	0	0	0	0	0	0	4	0	0	0	0	0	2	0	0	0	0
............................................................................................................................TCGACACAGTTACCTACGGCACCAAAC...............................	27	6	1.50	9	0	0	1	0	0	0	0	2	4	2	0	0	0	0	0	0	0
........................................TGTAAGGGTCTCGCAAGAAGATAGC.....................................................................................................................	25	6	1.50	9	0	0	0	1	0	0	0	0	0	0	8	0	0	0	0	0	0
....................................................................................................................ATACAAACTCGACACAGTTACCTACGGCAA....................................	30	6	1.50	9	0	0	0	0	0	0	1	8	0	0	0	0	0	0	0	0	0
.......................................................................................AGGGACTCCCCGATCGATGACCTTCA.....................................................................	26	4	1.50	6	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0
.......................................................................................................................................................CAGCCTCCTTCTTGTCCGTAAGGGC......	25	7	1.43	10	0	0	6	1	0	0	0	1	0	0	2	0	0	0	0	0	0
....................................................................T-TGCAGTGCATTGTATGGAGGGA..........................................................................................	23	7	1.43	10	0	0	0	0	0	0	1	4	2	3	0	0	0	0	0	0	0
......................................................................................GAGGGACTCCCCGATCGATGACCTT.......................................................................	25	5	1.40	7	0	0	0	0	0	0	0	0	3	0	1	0	3	0	0	0	0
.....................................................................................GGAGGGACTCCCCGATCGATGACCT........................................................................	25	5	1.40	7	0	0	0	0	0	0	3	0	2	1	1	0	0	0	0	0	0
...............................................................................................CCCGATCGATGACCTTCAAGTATACAAA...........................................................	28	5	1.40	7	0	0	0	0	0	0	1	1	3	0	0	0	2	0	0	0	0
.............................................................................................TCCCCGATCGATGACCTTCAAGTT.................................................................	24	5	1.40	7	0	0	0	0	0	0	4	0	3	0	0	0	0	0	0	0	0
.....................................................................................................................TACAAACTCGACACAGT................................................	17	6	1.33	8	0	0	0	0	0	0	5	0	0	0	3	0	0	0	0	0	0
.......................................................................................................................CAAACTCGACACAGTTACCTACGGC......................................	25	6	1.33	8	0	0	0	0	0	0	1	3	2	1	0	0	1	0	0	0	0
.....................................................................................................................TACAAACTCGACACAGTTACCTACGGCC.....................................	28	6	1.33	8	0	0	0	0	0	0	0	1	4	0	0	0	2	1	0	0	0
....................................................................T-TGCAGTGCATTGTATGGAGGGACT........................................................................................	25	7	1.29	9	0	0	0	0	0	0	1	0	8	0	0	0	0	0	0	0	0
..........................................................AGATAGCTATT-TGCAGTGC........................................................................................................	19	8	1.25	10	0	0	0	0	10	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................AGGGACTCCCCGATCGATGACCTTCAAG...................................................................	28	4	1.25	5	0	0	0	0	0	0	2	1	2	0	0	0	0	0	0	0	0
............................................................ATAGCTATT-TGCAGTGCATTGTATGGA..............................................................................................	27	8	1.25	10	0	0	0	0	0	0	4	2	1	3	0	0	0	0	0	0	0
..........................................................AGATAGCTATT-TGCAGTGCA.......................................................................................................	20	8	1.25	10	0	0	0	0	10	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................TGGAGGGACTCCCCGATCGATGACCTTT......................................................................	28	4	1.25	5	0	0	0	1	0	0	1	0	1	1	0	0	1	0	0	0	0
................................................................................................................................................ACCAAACCAGCCTCCTTCTTGTCCG.............	25	5	1.20	6	0	0	0	0	0	0	1	1	4	0	0	0	0	0	0	0	0
....................................................................................TGGAGGGACTCCCCGATCGATGAAA.........................................................................	25	5	1.20	6	0	0	0	0	0	0	0	0	4	2	0	0	0	0	0	0	0
...............................................................................................CCCGATCGATGACCTTCAAGTATACAAAC..........................................................	29	5	1.20	6	0	0	0	0	0	0	1	2	2	1	0	0	0	0	0	0	0
.............................................................................................TCCCCGATCGATGACCTTCAAAA..................................................................	23	5	1.20	6	0	0	0	0	0	0	1	2	2	1	0	0	0	0	0	0	0
...................................................................................................................TATACAAACTCGACACAGTTACCTACGGCA.....................................	30	6	1.17	7	0	0	0	0	0	0	3	0	4	0	0	0	0	0	0	0	0
......................................................................TGCAGTGCATTGTATGGAGGGACTCCCCGAT.................................................................................	31	7	1.00	7	0	0	0	0	0	0	4	2	1	0	0	0	0	0	0	0	0
...............................................................................................CCCGATCGATGACCTTCAAGTATACA.............................................................	26	5	1.00	5	0	0	0	0	0	0	1	2	1	1	0	0	0	0	0	0	0
..............................TGTACTGATGTGTAAGGGTCTCGCAAT.............................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
...................................TGATGTGTAAGGGTCTCGCAAGAA...........................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
..............................TGTACTGATGTGTAAGGGTCTCGCAAG.............................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
....................................................................................................................ATACAAACTCGACACAGTTACCTACGGT......................................	28	6	1.00	6	0	0	0	0	0	0	1	4	0	1	0	0	0	0	0	0	0
..............................TGTACTGATGTGTAAGGGTCTCGCA...............................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
.............TGGAGACATATGTAAAATGTACTGAT...............................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
......................................................................TGCAGTGCATTGTATGGAGGGACTCCCC....................................................................................	28	7	1.00	7	0	0	0	0	0	0	3	1	2	1	0	0	0	0	0	0	0
.............................ATGTACTGATGTGTAAGGGTC....................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
......................................................................................................................ACAAACTCGACACAGTTACCTACGGC......................................	26	6	1.00	6	0	0	0	0	0	0	1	2	3	0	0	0	0	0	0	0	0
.......CGTTACTGGAGACATATGTAAAATGTAC...................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
.............TGGAGACATATGTAAAAT.......................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.............................................................................................TCCCCGATCGATGACCTTCA.....................................................................	20	5	1.00	5	0	0	0	0	0	0	1	0	2	0	0	0	2	0	0	0	0
...................................TGATGTGTAAGGGTCTCGCAA..............................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
.............................................................................................TCCCCGATCGATGACCTTCAAGTACT...............................................................	26	5	1.00	5	0	0	0	0	0	0	4	0	1	0	0	0	0	0	0	0	0
..........................AAAATGTACTGATGTGTAAGGGTCTCGCAA..............................................................................................................................	30	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
..............................TGTACTGATGTGTAAGGGTCTCG.................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
........................................................................................GGGACTCCCCGATCGATGACCTTCAA....................................................................	26	4	1.00	4	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0
..........................................................AGATAGCTATT-TGCAGTGCATTGTATGG...............................................................................................	28	8	1.00	8	0	0	0	0	0	0	3	4	0	1	0	0	0	0	0	0	0
.................................................................TATT-TGCAGTGCATTGTATGGAGGGACTC.......................................................................................	29	7	1.00	7	0	0	0	0	0	0	3	0	4	0	0	0	0	0	0	0	0
..............................................................AGCTATT-TGCAGTGCATTGTATGGAGGGA..........................................................................................	29	7	1.00	7	0	0	0	0	0	0	1	4	2	0	0	0	0	0	0	0	0
....................................................................................................................................................AACCAGCCTCCTTCTTGTCCGTAAG.........	25	5	1.00	5	0	0	0	0	0	0	2	2	1	0	0	0	0	0	0	0	0
....................................................................................TGGAGGGACTCCCCGATCGATGACCTTA......................................................................	28	4	1.00	4	0	0	0	0	0	0	0	0	3	1	0	0	0	0	0	0	0
.......................TGTAAAATGTACTGATGTGTAAGGGTCTCGC................................................................................................................................	31	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
..........TACTGGAGACATATGTAAAA........................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.........TTACTGGAGACATATGTA...........................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
..........................AAAATGTACTGATGTGTAAGGGTCTCGCA...............................................................................................................................	29	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
................................TACTGATGTGTAAGGGTCTCGCA...............................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
.....................TATGTAAAATGTACTGATGTGTAAGG.......................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
.............................................................................................TCCCCGATCGATGACCTTCAAGTATACAAA...........................................................	30	5	1.00	5	0	0	0	0	0	0	1	3	1	0	0	0	0	0	0	0	0
...................................................................................ATGGAGGGACTCCCCGATCGATGACCT........................................................................	27	5	1.00	5	0	0	0	0	0	0	2	0	2	0	1	0	0	0	0	0	0
..........TACTGGAGACATATGTAAAATGTACTGA................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
............CTGGAGACATATGTAAAATGTACTGATG..............................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
.......................................................................................AGGGACTCCCCGATCGATGACCT........................................................................	23	5	1.00	5	0	0	0	0	0	0	0	0	0	0	1	0	4	0	0	0	0
...........................................................GATAGCTATT-TGCAGTGCATTGTATGGA..............................................................................................	28	8	1.00	8	0	0	0	0	0	0	5	2	1	0	0	0	0	0	0	0	0
................................TACTGATGTGTAAGGGTCTCGCAAG.............................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
...............................................................................................CCCGATCGATGACCTTCAAGTATT...............................................................	24	5	1.00	5	0	0	0	0	0	0	3	0	1	1	0	0	0	0	0	0	0
..............................TGTACTGATGTGTAAGGGTCTCGCAATT............................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
.................................................................TATT-TGCAGTGCATTGTA..................................................................................................	18	8	0.88	7	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0
....................................................................T-TGCAGTGCATTGTATGGAGGGACTCCC.....................................................................................	28	7	0.86	6	0	0	0	0	0	0	2	1	3	0	0	0	0	0	0	0	0
...........................................................................TGCATTGTATGGAGGGACTCCCCGATC................................................................................	27	7	0.86	6	0	0	0	0	0	0	4	1	1	0	0	0	0	0	0	0	0
......................................................................TGCAGTGCATTGTATGGAGGGACTCC......................................................................................	26	7	0.86	6	0	0	0	0	0	0	3	1	2	0	0	0	0	0	0	0	0
...................................................................TT-TGCAGTGCATTGTATGGAGGGACTC.......................................................................................	27	7	0.86	6	0	0	0	0	0	0	4	1	1	0	0	0	0	0	0	0	0
....................................................................................................................ATACAAACTCGACACA..................................................	16	6	0.83	5	0	0	0	0	0	0	0	2	0	3	0	0	0	0	0	0	0
.................................................................................................................AGTATACAAACTCGACACAGTTACC............................................	25	6	0.83	5	0	0	2	0	0	0	0	0	3	0	0	0	0	0	0	0	0
...........................................................................................................................CTCGACACAGTTACCTACGGCACCAAACC..............................	29	6	0.83	5	0	0	0	0	0	0	2	0	1	2	0	0	0	0	0	0	0
............................................................................................................................TCGACACAGTTACCTACGGCACCAAA................................	26	6	0.83	5	0	0	0	0	0	0	1	3	0	1	0	0	0	0	0	0	0
...............................................................................................................................................CACCAAACCAGCCTCCTTCTTGTCCGT............	27	5	0.80	4	0	0	0	0	0	0	1	1	1	0	1	0	0	0	0	0	0
..................................................................................TATGGAGGGACTCCCCGATCGATGACCTT.......................................................................	29	5	0.80	4	0	0	0	0	0	0	2	0	2	0	0	0	0	0	0	0	0
......................................................................................................................................................CCAGCCTCCTTCTTGTCCGTAAGGGC......	26	5	0.80	4	0	0	1	2	0	0	1	0	0	0	0	0	0	0	0	0	0
.............................................................................................TCCCCGATCGATGACCTTCAAGTATT...............................................................	26	5	0.80	4	0	0	0	0	0	0	1	1	2	0	0	0	0	0	0	0	0
...............................................................................TTGTATGGAGGGACTCCCCGATCGATA............................................................................	27	5	0.80	4	0	0	0	0	0	0	2	0	2	0	0	0	0	0	0	0	0
..........................................................AGATAGCTATT-TGCAGTGCATTGTATG................................................................................................	27	8	0.75	6	0	0	0	0	0	0	0	0	4	1	1	0	0	0	0	0	0
.......................................................................................AGGGACTCCCCGATCGATGACCTTCAAGTA.................................................................	30	4	0.75	3	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0
.................................................................TATT-TGCAGTGCATTGTATGGAGGG...........................................................................................	25	8	0.75	6	0	0	0	0	0	0	1	3	1	1	0	0	0	0	0	0	0
..........................................................AGATAGCTATT-TGCAGTGCATTGTAA.................................................................................................	26	8	0.75	6	0	0	0	2	0	0	0	1	1	0	0	0	2	0	0	0	0
..........................................................AGATAGCTATT-TGCAGTGCATTGC...................................................................................................	24	8	0.75	6	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................ATT-TGCAGTGCATTGTATGGAGGGA..........................................................................................	25	7	0.71	5	0	0	0	0	0	0	0	2	2	1	0	0	0	0	0	0	0
..........................................................................GTGCATTGTATGGAGGGACTCCCCGAT.................................................................................	27	7	0.71	5	0	0	0	0	0	0	3	0	1	1	0	0	0	0	0	0	0
.....................................................................................................................TACAAACTCGACACAG.................................................	16	6	0.67	4	0	0	0	0	0	0	1	1	2	0	0	0	0	0	0	0	0
.....................................................................................................................TACAAACTCGACACAGTTACCTACGGCAT....................................	29	6	0.67	4	0	0	0	0	0	0	3	0	0	0	0	0	1	0	0	0	0
...............................................................................................................CAAGTATACAAACTCGACACAGTTACCTA..........................................	29	6	0.67	4	0	0	0	0	0	0	0	1	2	1	0	0	0	0	0	0	0
........................................TGTAAGGGTCTCGCAAGA............................................................................................................................	18	6	0.67	4	0	0	0	0	0	0	1	2	0	1	0	0	0	0	0	0	0
.....................................................................................................................TACAAACTCGACACAGTTACCTACGGCACCAAA................................	33	6	0.67	4	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................TACAAACTCGACACAGTTACCTACA........................................	25	6	0.67	4	0	0	0	0	0	0	0	0	3	0	0	0	1	0	0	0	0
........................................TGTAAGGGTCTCGCAAGAA...........................................................................................................................	19	6	0.67	4	0	0	0	0	0	0	1	0	3	0	0	0	0	0	0	0	0
......................................TGTGTAAGGGTCTCGCAAGAAGATAGC.....................................................................................................................	27	6	0.67	4	0	0	0	1	0	0	0	0	0	0	3	0	0	0	0	0	0
....................................................................................................................ATACAAACTCGACACAGTTACCTACGA.......................................	27	6	0.67	4	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0
.....................................................................................................................TACAAACTCGACACAGTTACCTACGGCG.....................................	28	6	0.67	4	0	0	1	0	0	0	1	0	2	0	0	0	0	0	0	0	0
..........................................................AGATAGCTATT-TGCAGTGCATTGTT..................................................................................................	25	8	0.63	5	0	0	0	1	0	0	2	0	1	0	1	0	0	0	0	0	0
............................................................................................................................................................TCCTTCTTGTCCGTAAGGGCTATGC.	25	8	0.63	5	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0
..................................................................ATT-TGCAGTGCATTGTA..................................................................................................	17	8	0.63	5	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0
..........................................................AGATAGCTATT-TGCAGTGCATTGTAT.................................................................................................	26	8	0.63	5	0	0	0	0	0	0	0	0	1	1	0	0	3	0	0	0	0
........................................................................................................................................................AGCCTCCTTCTTGTCCGTAAGGGC......	24	8	0.63	5	0	0	0	1	0	0	0	0	0	0	4	0	0	0	0	0	0
........................................................................................................................................................AGCCTCCTTCTTGTCCGTAAGGGCT.....	25	8	0.63	5	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0
...............................................................GCTATT-TGCAGTGCATTGT...................................................................................................	19	8	0.63	5	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0
..................................................................................................................................................CAAACCAGCCTCCTTCTTGTCCGTAAG.........	27	5	0.60	3	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................CCAGCCTCCTTCTTGTCCGTAAGGGCTA....	28	5	0.60	3	0	0	0	0	0	0	0	0	1	0	1	0	1	0	0	0	0
....................................................................................TGGAGGGACTCCCCGATCGATGACAA........................................................................	26	5	0.60	3	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0
.............................................................................................TCCCCGATCGATGACCTTCAAGTATACA.............................................................	28	5	0.60	3	0	0	0	0	0	0	2	0	0	1	0	0	0	0	0	0	0
.............................................................................................TCCCCGATCGATGACCTTCAAT...................................................................	22	5	0.60	3	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0
..................................................................................TATGGAGGGACTCCCCGATCGATGACCT........................................................................	28	5	0.60	3	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................CACCAAACCAGCCTCCTTCTTGTCCGTA...........	28	5	0.60	3	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................ACCAGCCTCCTTCTTGTCCGTAAGGGC......	27	5	0.60	3	0	0	0	0	0	0	1	0	0	0	2	0	0	0	0	0	0

droSec2

CAGTCGCCGTTACAGGAGACATATGTAAAATGTACCGATGTGTAAGGGTCTCGCAAGAAGATAGCTATT-TGCAGTGCATTGTATGGAGGGACTCCCCGATCGATGACCTTCAAGTATACAAACTCGATACAGTTACCTACGGCACCAAACCAGCCTCCTTCTTGTCCGTAAGGGCTATGCA	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
...................................................................TT-TGCAGTGCATTGTATGGAGGGA..........................................................................................	24	20	1.70	34	32	0	0	2
...................................................................TT-TGCAGTGCATTGTATGGAGGGAC.........................................................................................	25	20	1.50	30	30	0	0	0
...................................................................TT-TGCAGTGCATTGTATGGAGG............................................................................................	22	20	0.90	18	10	0	8	0
...................................................................TT-TGCAGTGCATTGTATGGAGGG...........................................................................................	23	20	0.75	15	0	0	14	1
..............................................................................................................................GATACAGTTACCTACGGCACCAAACC..............................	26	20	0.65	13	13	0	0	0
...................................................................TT-TGCAGTGCATTGTATGGAG.............................................................................................	21	20	0.60	12	2	0	9	1
...................................................................TT-TGCAGTGCATTGTATGGAGGGACTC.......................................................................................	27	20	0.55	11	10	1	0	0
...................................................................TT-TGCAGTGCATTGTATGGAGGGAT.........................................................................................	25	20	0.45	9	8	0	0	1
......................................TGTGTAAGGGTCTCGCAAGAAGAT........................................................................................................................	24	20	0.15	3	0	0	3	0
...................................................................TT-TGCAGTGCATTGTATGGAGGGC..........................................................................................	24	20	0.15	3	1	0	2	0
..............................................................................................................................GATACAGTTACCTACGGCACCAA.................................	23	20	0.15	3	2	0	1	0
...............................................................................................CCCGATCGATGACCTTCAAGTATACA.............................................................	26	20	0.10	2	2	0	0	0
...............................................................................................................................ATACAGTTACCTACGGCACCAAACC..............................	25	20	0.10	2	2	0	0	0
....................................................................T-TGCAGTGCATTGTATGGAGGGACTC.......................................................................................	26	20	0.10	2	1	0	1	0
...................................................................TT-TGCAGTGCATTGTATGGAGGGACT........................................................................................	26	20	0.10	2	0	0	0	2
............................................................................................................................................................TCCTTCTTGTCCGTAAGGGCTATGC.	25	20	0.10	2	2	0	0	0
..........................................TAAGGGTCTCGCAAGAAGATAGCT....................................................................................................................	24	20	0.10	2	1	0	1	0
....................................................................T-TGCAGTGCATTGTATGGAGGGACT........................................................................................	25	20	0.10	2	2	0	0	0
..................ACATATGTAAAATGTACCGATGTGTA..........................................................................................................................................	26	20	0.10	2	2	0	0	0
..............................................................................................................................GATACAGTTACCTACGGCACCAAACCAG............................	28	20	0.10	2	2	0	0	0
...................................................................TT-TGCAGTGCATTGTATGGAT.............................................................................................	21	20	0.10	2	2	0	0	0
........................................................................................................................................................AGCCTCCTTCTTGTCCGTAAGGGC......	24	20	0.10	2	0	0	2	0
...............................................................................................CCCGATCGATGACCTTCAAGTATACAAA...........................................................	28	20	0.05	1	0	0	1	0
....................................................................................TGGAGGGACTCCCCGATCGATGACCTT.......................................................................	27	20	0.05	1	1	0	0	0
...............................................................................................CCCGATCGATGACCTTCAAGTATAC..............................................................	25	20	0.05	1	1	0	0	0
................................................................................................CCGATCGATGACCTTCAAGTATACAAACT.........................................................	29	20	0.05	1	1	0	0	0
......................................TGTGTAAGGGTCTCGCAAGAAGA.........................................................................................................................	23	20	0.05	1	0	0	1	0
...................................................................TT-TGCAGTGCATTGTATGGAGGGT..........................................................................................	24	20	0.05	1	0	0	1	0
.....................................................................................GGAGGGACTCCCCGATCGATGACCTT.......................................................................	26	20	0.05	1	1	0	0	0
...................................................................TT-TGCAGTGCATTGTATGGAGGGACTCCC.....................................................................................	29	20	0.05	1	1	0	0	0
.......................................................................................................................CAAACTCGATACAGTTACCTACGGC......................................	25	20	0.05	1	1	0	0	0
......................................TGTGTAAGGGTCTCGCAAGAAGATA.......................................................................................................................	25	20	0.05	1	0	0	1	0
......................................TGTGTAAGGGTCTCGCAAGAAGATAA......................................................................................................................	26	20	0.05	1	1	0	0	0
.................................................................TATT-TGCAGTGCATTGTATGG...............................................................................................	21	20	0.05	1	0	0	0	1
..........TACAGGAGACATATGTAAAATG......................................................................................................................................................	22	20	0.05	1	1	0	0	0
.......................TGTAAAATGTACCGATGTGTA..........................................................................................................................................	21	20	0.05	1	1	0	0	0
..............................................................................................................................GATACAGTTACCTACGGCACCAAA................................	24	20	0.05	1	1	0	0	0
.............................................................TAGCTATT-TGCAGTGCATTGTATGGA..............................................................................................	26	20	0.05	1	0	0	0	1
............................................................................................................................................................TCCTTCTTGTCCGTAAGGGCTATA..	24	20	0.05	1	1	0	0	0
............................................................................................................................TCGATACAGTTACCTACGGCA.....................................	21	20	0.05	1	1	0	0	0
..............................................................................................................................GATACAGTTACCTACGGCACCAAACCA.............................	27	20	0.05	1	1	0	0	0
.............................................................................CATTGTATGGAGGGACTCCT.....................................................................................	20	20	0.05	1	0	1	0	0
...................................................................TT-TGCAGTGCATTGTATGGAGGGATA........................................................................................	26	20	0.05	1	1	0	0	0
...............................................................................................CCCGATCGATGACCTTCAAGTATACAA............................................................	27	20	0.05	1	1	0	0	0
........................................................................................................TGACCTTCAAGTATACAAACTC........................................................	22	20	0.05	1	1	0	0	0
...................................................................TT-TGCAGTGCATTGTATGGAGGGACTCC......................................................................................	28	20	0.05	1	1	0	0	0
.......................................................................GCAGTGCATTGTATGGAGGGA..........................................................................................	21	20	0.05	1	0	0	0	1
...................................................................TT-TGCAGTGCATTGTATGGAGGA...........................................................................................	23	20	0.05	1	1	0	0	0
......................................................................................GAGGGACTCCCCGATCGATGA...........................................................................	21	20	0.05	1	0	1	0	0
..................................................................................................GATCGATGACCTTCAAGTATACAAACT.........................................................	27	20	0.05	1	1	0	0	0
...............................................................................................................................ATACAGTTACCTACGGCACCAAACCA.............................	26	20	0.05	1	1	0	0	0
....................................................................................................TCGATGACCTTCAAGTATACAA............................................................	22	20	0.05	1	1	0	0	0
...................................................................TT-TGCAGTGCATTGTATGGAGGTT..........................................................................................	24	20	0.05	1	1	0	0	0
....................................................................................................TCGATGACCTTCAAGTATACAAACTC........................................................	26	20	0.05	1	1	0	0	0
....................................................................................................TCGATGACCTTCAAGTATAC..............................................................	20	20	0.05	1	1	0	0	0
...............................GTACCGATGTGTAAGGGTC....................................................................................................................................	19	20	0.05	1	1	0	0	0
.............................................................................................TCCCCGATCGATGACCTTCAAGTATACA.............................................................	28	20	0.05	1	1	0	0	0
....................................................................................TGGAGGGACTCCCCGATCGA..............................................................................	20	20	0.05	1	1	0	0	0
..................................................................................................GATCGATGACCTTCAAGTATACA.............................................................	23	20	0.05	1	1	0	0	0
...................................................................TT-TGCAGTGCATTGTATGGAGT............................................................................................	22	20	0.05	1	1	0	0	0
..............................TGTACCGATGTGTAAGGGTCTCGCAA..............................................................................................................................	26	20	0.05	1	0	0	1	0
................................TACCGATGTGTAAGGGTCTCGCAAGA............................................................................................................................	26	20	0.05	1	0	0	0	1

droYak3

CAGTTGCCGTTACAGGAGACATATGTAAAATGTACCGATGTGTAAGGGTCTCGCAAGAAGATACCTATT-TGCAGTGCATTGTATGGAGGGACTCCCCGATCGATGACCTTCCAGTATACAAACTCGACACAGTTACCTACGGCACCAAACCAGCCTCCTTCTTGTCCGTAAGGGCTATGCA	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
.....................................................................................................................TACAAACTCGACACAGTTACCTACGGC......................................	27	20	3.00	60	0	59	0	1	0	0	0	0	0	0	0
.....................................................................................................................TACAAACTCGACACAGTTACCTACGGCA.....................................	28	20	2.35	47	2	45	0	0	0	0	0	0	0	0	0
...........................................................................................................................CTCGACACAGTTACCTACGGCACC...................................	24	20	0.80	16	0	0	0	0	0	0	0	0	0	0	16
.....................................................................................................................TACAAACTCGACACAGTTACCTACGG.......................................	26	20	0.65	13	0	13	0	0	0	0	0	0	0	0	0
....................................................................................TGGAGGGACTCCCCGATCGATGACC.........................................................................	25	20	0.50	10	0	2	8	0	0	0	0	0	0	0	0
...........................AAATGTACCGATGTGTAAGGGTCTCG.................................................................................................................................	26	20	0.35	7	0	7	0	0	0	0	0	0	0	0	0
.....................................................................................................................TACAAACTCGACACAGTTACCTACGGCAC....................................	29	20	0.30	6	2	0	0	0	0	0	0	0	0	0	4
.....................................................................................................................TACAAACTCGACACAGTTACCTACG........................................	25	20	0.30	6	0	6	0	0	0	0	0	0	0	0	0
......................................................................................................................ACAAACTCGACACAGTTACCTACGGCA.....................................	27	20	0.25	5	0	5	0	0	0	0	0	0	0	0	0
......................................................................................................................ACAAACTCGACACAGTTACCTACGGC......................................	26	20	0.20	4	0	4	0	0	0	0	0	0	0	0	0
.....................................................................................GGAGGGACTCCCCGATCGATGACC.........................................................................	24	20	0.20	4	0	4	0	0	0	0	0	0	0	0	0
....................................................................................TGGAGGGACTCCCCGATCGATGACCC........................................................................	26	20	0.15	3	0	0	3	0	0	0	0	0	0	0	0
......................................................................................................................ACAAACTCGACACAGTTACCTACGGCAC....................................	28	20	0.15	3	0	3	0	0	0	0	0	0	0	0	0
....................................................................................................................................................AACCAGCCTCCTTCTTGTCCGTAAGGGC......	28	20	0.15	3	0	2	1	0	0	0	0	0	0	0	0
..................................................................................TATGGAGGGACTCCCCGATCGATGACC.........................................................................	27	14	0.14	2	0	1	1	0	0	0	0	0	0	0	0
............................................................................................................................................................TCCTTCTTGTCCGTAAGGGCTATGCA	26	20	0.10	2	0	2	0	0	0	0	0	0	0	0	0
.....................TATGTAAAATGTACCGATGTGTAAGGG......................................................................................................................................	27	20	0.10	2	0	1	1	0	0	0	0	0	0	0	0
.......................................................................................................................CAAACTCGACACAGTTACCTACGGCACC...................................	28	20	0.10	2	0	2	0	0	0	0	0	0	0	0	0
..........TACAGGAGACATATGTAAAATGTACC..................................................................................................................................................	26	20	0.10	2	0	0	2	0	0	0	0	0	0	0	0
......................................TGTGTAAGGGTCTCGCAAGAAGATA.......................................................................................................................	25	20	0.10	2	0	0	0	0	0	0	1	0	0	0	1
....................................................................T-TGCAGTGCATTGTATGGAGGGACT........................................................................................	25	20	0.10	2	0	1	1	0	0	0	0	0	0	0	0
................................................................................TGTATGGAGGGACTCCCCGATCGATG............................................................................	26	13	0.08	1	0	1	0	0	0	0	0	0	0	0	0
................................................................................TGTATGGAGGGACTCCCCGATCGATGA...........................................................................	27	13	0.08	1	0	1	0	0	0	0	0	0	0	0	0
................................................................................TGTATGGAGGGACTCCCCGATCGA..............................................................................	24	13	0.08	1	0	1	0	0	0	0	0	0	0	0	0
................................................................................TGTATGGAGGGACTCCCCGATCGAT.............................................................................	25	13	0.08	1	0	1	0	0	0	0	0	0	0	0	0
..................................................................................TATGGAGGGACTCCCCGATCGATGACCT........................................................................	28	14	0.07	1	0	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................ACCTACGGCACCAAACCAGCCTCCT......................	25	16	0.06	1	0	1	0	0	0	0	0	0	0	0	0
......................................................................................................................ACAAACTCGACACAGTTACCTACGG.......................................	25	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
...................................................................................................................................................AAACCAGCCTCCTTCTTGTCCGTA...........	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.................................................................TATT-TGCAGTGCATTGTATGGAG.............................................................................................	23	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................CAGCCTCCTTCTTGTCCGTAAGGGC......	25	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0
...........................AAATGTACCGATGTGTAAGGGTCTCGC................................................................................................................................	27	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................CCAGCCTCCTTCTTGTCCGTAAGGGCTA....	28	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
....................................................................T-TGCAGTGCATTGTATGGAGGGACTCC......................................................................................	27	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
....................................................................T-TGCAGTGCATTGTATGGAGG............................................................................................	21	20	0.05	1	0	0	0	0	0	0	1	0	0	0	0
........................................................................................................................................................AGCCTCCTTCTTGTCCGTAAGGGC......	24	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0
.................................................................TATT-TGCAGTGCATTGTATGGAGG............................................................................................	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
........GTTACAGGAGACATATGTAAAATGTA....................................................................................................................................................	26	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................CAAACTCGACACAGTTACCTACGGC......................................	25	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
............................AATGTACCGATGTGTAAGGGTCTCG.................................................................................................................................	25	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
................................TACCGATGTGTAAGGGTCTCGCA...............................................................................................................................	23	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.................................................................TATT-TGCAGTGCATTGTATGGAGGGA..........................................................................................	26	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
..........................................................................................GACTCCCCGATCGATGACC.........................................................................	19	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0
.....................TATGTAAAATGTACCGATGTGTAAGG.......................................................................................................................................	26	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
..............................TGTACCGATGTGTAAGGGTCTCGCAA..............................................................................................................................	26	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
...........................AAATGTACCGATGTGTAAGGGTCT...................................................................................................................................	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.................................................................TATT-TGCAGTGCATTGTATGGAGGGAC.........................................................................................	27	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
................................TACCGATGTGTAAGGGTCTCGCAAGA............................................................................................................................	26	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................................AAACTCGACACAGTTACCTACGGC......................................	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
....................................................................................................................ATACAAACTCGACACAGTTACCTACGGC......................................	28	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.....................TATGTAAAATGTACCGATGTGTA..........................................................................................................................................	23	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................ACCAGCCTCCTTCTTGTCCGTAAGG........	25	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.......................TGTAAAATGTACCGATGTGTAAGGGTC....................................................................................................................................	27	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0
...........ACAGGAGACATATGTAAAATGTACCGA................................................................................................................................................	27	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0

droEre2

GGATTGCCTTGTGTGGCGATATTTGCAAGATGTACCGTTGTGTCCGCATGACACATCCTGATCAATATC-TGCAGTGCATTTTATGGCGCGACAATCCTGATGACGAGGTTAAGGTATACACTTTGGATACGGTGACCTACGGAACTAAGCCGGCTGCTTTCTTAGCAATTCGAGCTATGCA	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
......................TTGCAAGATGTACCGTTGTGTCCGCA......................................................................................................................................	26	20	0.20	4	4	0	0	0	0	0	0
.....................................................................................................................TACACTTTGGATACGGTGACCTACGGAAC....................................	29	20	0.15	3	1	0	0	0	0	0	2
......................................................................................................................................GACCTACGGAACTAAGCCGGCTG.........................	23	20	0.10	2	0	0	0	0	0	0	2
........................................................................................................................ACTTTGGATACGGTGACCTACGG.......................................	23	20	0.10	2	2	0	0	0	0	0	0
.....................................................................................................................TACACTTTGGATACGGTGACCTACGGAA.....................................	28	20	0.10	2	2	0	0	0	0	0	0
........................GCAAGATGTACCGTTGTGTCCGCATGA...................................................................................................................................	27	20	0.10	2	2	0	0	0	0	0	0
.......................................................TCCTGATCAATATC-TGCAGTGCA.......................................................................................................	23	20	0.05	1	1	0	0	0	0	0	0
.....................................................................................................................TACACTTTGGATACGGTGACCTA..........................................	23	20	0.05	1	1	0	0	0	0	0	0
.......................................................TCCTGATCAATATC-TGCAGTGCATTGG...................................................................................................	27	20	0.05	1	1	0	0	0	0	0	0
................................................................................................................................TACGGTGACCTACGGAACTAAGCCGGC...........................	27	20	0.05	1	0	0	0	0	0	0	1
..................................................ACACATCCTGATCAATATC-TGCAG...........................................................................................................	24	20	0.05	1	1	0	0	0	0	0	0
.......................................................TCCTGATCAATATC-TGCAGTGCATT.....................................................................................................	25	20	0.05	1	1	0	0	0	0	0	0
...................TATTTGCAAGATGTACCGTTGTGTC..........................................................................................................................................	25	20	0.05	1	1	0	0	0	0	0	0
..........................AAGATGTACCGTTGTGTCCGC.......................................................................................................................................	21	20	0.05	1	0	0	0	0	1	0	0
.................GATATTTGCAAGATGTACCGTTGTG............................................................................................................................................	25	20	0.05	1	1	0	0	0	0	0	0
........................GCAAGATGTACCGTTGTGTCCGCAT.....................................................................................................................................	25	20	0.05	1	1	0	0	0	0	0	0
..........................................................................................................................................TACGGAACTAAGCCGGCTGCTT......................	22	20	0.05	1	1	0	0	0	0	0	0
....TGCCTTGTGTGGCGATATTTGCAAGAT.......................................................................................................................................................	27	20	0.05	1	1	0	0	0	0	0	0
...................TATTTGCAAGATGTACCGTTGTG............................................................................................................................................	23	20	0.05	1	1	0	0	0	0	0	0
......................................................................................................................ACACTTTGGATACGGTGACC............................................	20	20	0.05	1	1	0	0	0	0	0	0
..................................................................................................................................................TAAGCCGGCTGCTTTCTTAGCAATTCG.........	27	20	0.05	1	1	0	0	0	0	0	0

dpe_277

scaffold_180:46347-46427 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Repeatable elements

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-18.9	-18.4	-18.2