ID:

dpe_271

 Coordinate:

scaffold_84:219302-219353 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-44.2 -43.5

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
Gypsy8-I_Dpse-intLTRGypsy+
mature
  1. dpe_271  scaffold_84:219332-219353 +
  2. scaffold_3491:18-39 -
  3. scaffold_6961:1287-1308 +
star
  1. scaffold_1904:4739-4761 -
  2. dpe_271  scaffold_84:219302-219324 +
  3. scaffold_60:339345-339367 +
  4. scaffold_186:12186-12208 +
  5. scaffold_147:12755-12777 -
  6. scaffold_147:68044-68066 -
  7. scaffold_4721:654-676 -
  8. scaffold_5788:1773-1795 +
  9. scaffold_8497:369-391 -
  10. scaffold_6433:1566-1588 -
  11. scaffold_6518:1442-1464 +
  12. scaffold_7153:809-831 -
  13. scaffold_9375:889-911 -
  14. scaffold_9934:591-613 +
  15. scaffold_10147:641-663 +

Sense Strand Reads

CTAAGCCGATCCAGAGACGGGCGGAGCTGGCCACGGGGGGCGGGCCGATCTTTGGCAGCACGGGCGAAAGGTCGGAGGACCTATTGATCACGGGCTGGGAGATCGGTCAGCACCCTGGATCGGAACCCAAGGACGGGCTGGAAGAAAAGGCA
***********************************((((((.(((((((((((..((((.(((((((.(((((....))))).))).)).)).))))))))))))))).)).)))).*********************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V057
head
 V111
male body
................................................................................CTATTGATCACGGGCTGGGAGA.................................................. 22 0 3 3.67 11 6 5 0 0
................................................................................CTATTGATCACGGGCTGGGAG................................................... 21 0 3 2.67 8 8 0 0 0
...................................................................................................................TGGATCGGAACCCAAGGACGGGC.............. 23 0 9 2.56 23 23 0 0 0
................................................................................CTATTGATCACGGGCTGGGAGAT................................................. 23 0 3 2.00 6 5 1 0 0
............................................................................................................AGCACCCTGGATCGGAACCCAAGGAC.................. 26 0 9 1.67 15 1 14 0 0
...................................................................................................................TGGATCGGAACCCAAGGACGGG............... 22 0 9 1.44 13 13 0 0 0
...................................................................................................................TGGATCGGAACCCAAGGACGG................ 21 0 9 1.11 10 10 0 0 0
...................................................................................................................TGGATCGGAACCCAAGGACGGGCTG............ 25 0 9 1.00 9 9 0 0 0
...................................................................................................................TGGATCGGAACCCAAGGACGGGCTGG........... 26 0 4 0.75 3 3 0 0 0
................................................................................CTATTGATCACGGGCTGGGAGT.................................................. 22 1 3 0.67 2 0 2 0 0
................................................................................CTATTGATCACGGGCTGGGAGATCG............................................... 25 0 3 0.67 2 2 0 0 0
..................................................................................................................CTGGATCGGAACCCAAGGACGG................ 22 0 9 0.56 5 2 3 0 0
..................................................................................................................CTGGATCGGAACCCAAGGACGGG............... 23 0 9 0.56 5 5 0 0 0
...................................................................................................................TGGATCGGAACCCAAGGACGGGCT............. 24 0 9 0.44 4 4 0 0 0
..........................................................................................................TCAGCACCCTGGATCGGAACCCAAGGA................... 27 0 9 0.44 4 4 0 0 0
........ATCCAGAGACGGGCGGAGCTG........................................................................................................................... 21 0 20 0.35 7 7 0 0 0
................................................................................CTATTGATCACGGGCTGGGAGATC................................................ 24 0 3 0.33 1 1 0 0 0
.................................................................................TATTGATCACGGGCTGGGAG................................................... 20 0 3 0.33 1 1 0 0 0
................................................................................CTCTTGATCACGGGCTGGGAG................................................... 21 1 3 0.33 1 0 0 1 0
.................................................................................TATTGATCACGGGCTGGGAGAT................................................. 22 0 3 0.33 1 1 0 0 0
..........................................................................................................TCAGCACCCTGGATCGGAACCCAAGG.................... 26 0 9 0.33 3 3 0 0 0
....................................................................................................GATCGGTCAGCACCTTGGATC............................... 21 1 6 0.33 2 0 2 0 0
..................................................................................................................CTGGATCGGAACCCAAGGACGGGC.............. 24 0 9 0.33 3 3 0 0 0
.................................................................................TATTGATCACGGGCTGGGAGATC................................................ 23 0 3 0.33 1 1 0 0 0
................................................................................CTATTGATCACGGGCTGGGAGAAA................................................ 24 2 3 0.33 1 1 0 0 0
.......................................................................................................................TCGGAACCCAAGGACGGGCTGGA.......... 23 0 4 0.25 1 1 0 0 0
.......................................................................................................................TCGGAACCCAAGGACGGGCTGGAA......... 24 0 4 0.25 1 1 0 0 0
.......................................................................................................................TCGGAACCCAAGGACGGGCTGG........... 22 0 4 0.25 1 1 0 0 0
...................................................................................................................TGGATCGGCACCCAAGGACGGGC.............. 23 1 9 0.22 2 2 0 0 0
................................................................................................................CCCTGGATCGGAACCCAAGGACGGGCT............. 27 0 9 0.22 2 0 2 0 0
...................................................................................................................TGGATCGGAACCCAAGGACG................. 20 0 9 0.22 2 2 0 0 0
...........................................................................................................CAGCACCTTGGATCGGAACCCAAGGAC.................. 27 1 9 0.22 2 0 2 0 0
............................................................................................................AGCACCCTGGATCGGAACCCAAGGACGG................ 28 0 9 0.22 2 0 2 0 0
.................................................................................TATTGATCACGGGCTGGGA.................................................... 19 0 5 0.20 1 1 0 0 0
................................................................................CTATTGATCACGGGCTGGGA.................................................... 20 0 5 0.20 1 1 0 0 0
................................................................................CTATTGATCACGGGCTGG...................................................... 18 0 6 0.17 1 1 0 0 0
........ATCCAGAGACGGGCGGAGC............................................................................................................................. 19 0 20 0.15 3 1 2 0 0
........ATCCAGAGACGGGCGGAGCTGGC......................................................................................................................... 23 0 20 0.15 3 3 0 0 0
..................................................TTTGGCAGCACGGGCGAAAGGTC............................................................................... 23 0 15 0.13 2 0 2 0 0
...................................................................................................................TGGATCGGAACCCAAGGAC.................. 19 0 9 0.11 1 1 0 0 0
............................................................................................................AGCACCCTCGATCGGAACCCAAGGAC.................. 26 1 9 0.11 1 1 0 0 0
.............................................................................................................GCACCCTGGATCGGAACCCAAGGAC.................. 25 0 9 0.11 1 0 1 0 0
..................................................................................................................................GGACGGGCTGGAAGAAAAGGC. 21 0 9 0.11 1 1 0 0 0
..........................................................................................................TCAGCACCCTGGATCGGAACCCAAG..................... 25 0 9 0.11 1 1 0 0 0
................................................................................................................CCCTGGATCGGAACCCAAGGACGG................ 24 0 9 0.11 1 1 0 0 0
................................................................................................................CCCTGGATAGGAACCCAAGGACA................. 23 2 9 0.11 1 1 0 0 0
...................................................................................................................TGGATCGGCACCCAAGGACGAG............... 22 2 9 0.11 1 1 0 0 0
...................................................................................................................TGGATCGGAACCCAAGGACAGGC.............. 23 1 9 0.11 1 1 0 0 0
................................................................................................................CCCTGGATCGGAACCCAAGGACGGGC.............. 26 0 9 0.11 1 0 1 0 0
....................................................................................................................GGATCGGAACCCAAGGACGGGC.............. 22 0 9 0.11 1 1 0 0 0
....................................................................................................................GGATCGGATCCCAAGGACGGGC.............. 22 1 9 0.11 1 1 0 0 0
..........................................................................................................TCAGCACCCTGGATCGGAACCCAA...................... 24 0 9 0.11 1 1 0 0 0
................................................................................................................CCCTGGATCGGAACCCAAGGACGGAC.............. 26 1 9 0.11 1 0 1 0 0
............................................................................................................AGCACCCTGGATCGGAACCCAAGGA................... 25 0 9 0.11 1 1 0 0 0
..........................................................................................................TCAGCACCCTGGATCGGAACCCAAGGAC.................. 28 0 9 0.11 1 0 1 0 0
...................................................................................................................TGGATCGGAACCCAAGGACGAGC.............. 23 1 9 0.11 1 1 0 0 0
....................................................................................................................GGATCGGAACCCAAGGACGG................ 20 0 9 0.11 1 1 0 0 0
..................................................................................................................TTGGATCGGAACCCAAGGACGAGC.............. 24 2 9 0.11 1 1 0 0 0
.............................................................................................................GCACCCTGGATCGGAACCCAAGAAC.................. 25 1 9 0.11 1 0 1 0 0
..................................................................................................................TTGGATCGGAACCCAAGGACGA................ 22 2 9 0.11 1 1 0 0 0
...................................................................................................................TGGATCTGAACCCAAGGACGGGC.............. 23 1 9 0.11 1 1 0 0 0
...................................................................................................................TGTATCGGAACCCAAGGACGGGC.............. 23 1 9 0.11 1 1 0 0 0
..........................................................................................................TCAGCACCCTGGATCGGAACCCAAGGAA.................. 28 1 9 0.11 1 1 0 0 0
.................................................................................................................CCTGGATCGGAACCCAAGGACGG................ 23 0 9 0.11 1 1 0 0 0
...................................................................................................................TGGATCGGGACCCAAGGACGGG............... 22 1 9 0.11 1 1 0 0 0
..............................................................................................................CATAATGGATCGGAACCCAAGGACGGGC.............. 28 3 9 0.11 1 1 0 0 0
.........TCCAGAGACGGGCGGAGCTGGC......................................................................................................................... 22 0 20 0.10 2 2 0 0 0
........ATCCAGAGACGGGCGGAG.............................................................................................................................. 18 0 20 0.10 2 2 0 0 0
..................................................................................ATTGATGAAGGGCTGGGA.................................................... 18 2 13 0.08 1 0 0 0 1
.................................................................................................................................TTGACGGGCTGGAAGAGAAGG.. 21 3 14 0.07 1 0 0 0 1
..................................................TTTGGCAGCACGGGCGAAAGG................................................................................. 21 0 15 0.07 1 1 0 0 0
..................................................TTTGGCAGCACGGGCGAAAGGTCGT............................................................................. 25 1 15 0.07 1 0 1 0 0
..................................................TTTGGCAGCACGGGCGAAAGGTCG.............................................................................. 24 0 15 0.07 1 1 0 0 0
.......GATCAATAGCCGGGCGGAGCT............................................................................................................................ 21 3 20 0.05 1 0 0 1 0
..........CCAGAGACGGGCGGAGCTGGC......................................................................................................................... 21 0 20 0.05 1 1 0 0 0
....................................................TGGCAGCACGGGCGAAAGGTC............................................................................... 21 0 20 0.05 1 1 0 0 0
.TAAGCCGATCCAGAGACGGGCGTCT.............................................................................................................................. 25 3 20 0.05 1 0 0 0 1
...................................................TTGGCAGCACGGGCGAAAGGTCG.............................................................................. 23 0 20 0.05 1 1 0 0 0
....................................................TGGCAGCACGGGCGAAAGG................................................................................. 19 0 20 0.05 1 1 0 0 0
........ATCCAGAGACGGGCGGAGCTGA.......................................................................................................................... 22 1 20 0.05 1 1 0 0 0
...................................................TTGGCTGTACGGGCGAAA................................................................................... 18 2 20 0.05 1 0 0 1 0
.........TCCAGAGACGGGCGGAGCTGG.......................................................................................................................... 21 0 20 0.05 1 1 0 0 0
....................................................TGGCAGCACGGGCGAAAGGTCGGA............................................................................ 24 0 20 0.05 1 1 0 0 0
..AAGCCGATCCAGAGACGG.................................................................................................................................... 18 0 20 0.05 1 1 0 0 0
...................................................TTGGCAGCACGGGCGAAAGG................................................................................. 20 0 20 0.05 1 1 0 0 0
...........................................................ACGGGCGAAAGGTCGGAGGA......................................................................... 20 0 20 0.05 1 1 0 0 0

Anti-sense strand reads

GATTCGGCTAGGTCTCTGCCCGCCTCGACCGGTGCCCCCCGCCCGGCTAGAAACCGTCGTGCCCGCTTTCCAGCCTCCTGGATAACTAGTGCCCGACCCTCTAGCCAGTCGTGGGACCTAGCCTTGGGTTCCTGCCCGACCTTCTTTTCCGT
***********************************((((((.(((((((((((..((((.(((((((.(((((....))))).))).)).)).))))))))))))))).)).)))).*********************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V042
embryo
 V057
head
....................................................................................................CTAGCCAGTCGTGGAACCTAGCCTT........................... 25 1 6 28.00 168 93 75 0 0
....................................................................................................CTAGCCAGTCGTGGGACCTAGCCTT........................... 25 0 6 21.83 131 122 9 0 0
...................................................................................................TCTAGCCAGTCGTGGAACCTAGCCTT........................... 26 1 6 6.33 38 26 11 1 0
......................................CCGCCCGGCTAGAAACCGTCGT............................................................................................ 22 0 1 5.00 5 4 0 1 0
.....................................................................................................TAGCCAGTCGTGGGACCTAGCCTT........................... 24 0 10 4.70 47 35 12 0 0
.....................................................................................................TAGCCAGTCGTGGAACCTAGCCTT........................... 24 1 10 4.50 45 19 25 1 0
....................................................................................................CTAGCCAGTCGTGGGACCTAGCCT............................ 24 0 6 4.33 26 23 3 0 0
...................................................................TTCCAGCCTCCTGGATAACTAGT.............................................................. 23 0 19 3.89 74 74 0 0 0
....................................................................................................CTAGCCAGTCGTGGAACCTAGCCT............................ 24 1 6 3.33 20 18 2 0 0
....................................CCCCGCCCGGCTAGAAACCGTCGT............................................................................................ 24 0 1 3.00 3 3 0 0 0
................................................................................................CCCTCTAGCCAGTCGTGGGACCTAGCCT............................ 28 0 2 3.00 6 6 0 0 0
.....................................................................................................................CTAGCCTTGGGTTCCTGCCCGACCT.......... 25 0 4 2.75 11 11 0 0 0
..................................................................TTTCCAGCCTCCTGGATAACTAGT.............................................................. 24 0 19 2.68 51 51 0 0 0
...................................................................................................TCTAGCCAGTCGTGGGACCTAGCCTT........................... 26 0 6 2.17 13 13 0 0 0
..........................................CCGGCTAGAAACCGTCGTGCCCGCTT.................................................................................... 26 0 1 2.00 2 1 1 0 0
.....................................CCCGCCCGGCTAGAAACCGTCGT............................................................................................ 23 0 1 2.00 2 2 0 0 0
...................................CCCCCGCCCGGCTAGAAACCGTCGT............................................................................................ 25 0 1 2.00 2 2 0 0 0
..................................................................................................CTCTAGCCAGTCGTGGGACCTAGCCTT........................... 27 0 2 2.00 4 3 1 0 0
........................................GCCCGGCTAGAAACCGTCGT............................................................................................ 20 0 1 2.00 2 1 0 1 0
.......................................CGCCCGGCTAGAAACCGTCGT............................................................................................ 21 0 1 2.00 2 1 0 1 0
..................................CCCCCCGCCCGGCTAGAAACCGTCG............................................................................................. 25 0 1 2.00 2 2 0 0 0
...................................................................................................TCTAGCCAGTCGTGGAACCTAGCCT............................ 25 1 6 1.67 10 9 1 0 0
.....................................................................................................................CTAGCCTTGGGTTCCTGCCCGACC........... 24 0 4 1.50 6 6 0 0 0
..................................................................................................CTCTAGCCAGTCGTGGGACCTAGCCT............................ 26 0 2 1.50 3 1 2 0 0
......................................................................................................AGCCAGTCGTGGGACCTAGCCTT........................... 23 0 10 1.50 15 15 0 0 0
.....................................................................CCAGCCTCCTGGATAACTAGT.............................................................. 21 0 20 1.10 22 21 1 0 0
.....................................CCCGCCCGGCTAGAAACCGTCGTGC.......................................................................................... 25 0 1 1.00 1 1 0 0 0
..........................................CCGGCTAGAAACCGTCGTGCCCGCT..................................................................................... 25 0 1 1.00 1 1 0 0 0
.....................................TCCGCCCGGCTAGAAACCGTCGT............................................................................................ 23 1 1 1.00 1 1 0 0 0
........................................................................................................CCAGTCGTGGGACCTAGCCTT........................... 21 0 10 1.00 10 10 0 0 0
................................................AGAAACCGTCGTGCCCGCTTTCCAGCC............................................................................. 27 0 1 1.00 1 1 0 0 0
........................................GCCCGGCTAGAAACCGTCGTGCCC........................................................................................ 24 0 1 1.00 1 1 0 0 0
..........................................CCGGCTAGAAACCGTCGTGCCCGCTTT................................................................................... 27 0 1 1.00 1 1 0 0 0
.................................................................................................CCTCTAGCCAGTCGTGGGACCTAGCCTT........................... 28 0 2 1.00 2 2 0 0 0
................................TGCCCCCCGCCCGGCTAGAAACCGTCGT............................................................................................ 28 0 1 1.00 1 1 0 0 0
...........................................CGGCTAGAAACCGTCGTGC.......................................................................................... 19 0 1 1.00 1 1 0 0 0
..........................................CCGGCTAGAAACCGTCGGGCCCGCTT.................................................................................... 26 1 1 1.00 1 1 0 0 0
.......................................CGCCCGGCTAGAAACCGTCG............................................................................................. 20 0 1 1.00 1 1 0 0 0
...............................GTGCCCCCCGCCCGGCTAGAAACCGT............................................................................................... 26 0 1 1.00 1 1 0 0 0
....................................CCCCGCCCGGCTAGAAACCGT............................................................................................... 21 0 1 1.00 1 1 0 0 0
......................................CCGCCCGGCTAGAAACCGTCGTG........................................................................................... 23 0 1 1.00 1 1 0 0 0
.................................GCCCCCCGCCCGGCTAGAAACCGT............................................................................................... 24 0 1 1.00 1 1 0 0 0
..................................CCCCCCGCCCGGCTAGAAACCGTCGT............................................................................................ 26 0 1 1.00 1 1 0 0 0
.....................................CCCGCCCGGCTAGAAACCGTCG............................................................................................. 22 0 1 1.00 1 1 0 0 0
................................................................GCTTTCCAGCCTCCTGGATAACTAGT.............................................................. 26 0 15 0.93 14 14 0 0 0
..............................................................CCGCTTTCCAGCCTCCTGGATAACTAGT.............................................................. 28 0 14 0.93 13 13 0 0 0
.....................................................................................................TAGCCAGTCGTGGGACCTAGCCT............................ 23 0 10 0.90 9 9 0 0 0
............................................................................CCTGGATAACTAGTGCCCGACCCT.................................................... 24 0 5 0.80 4 4 0 0 0
.................................................................................................................GGACCTAGCCTTGGGTTCCTGCCCGACC........... 28 0 4 0.75 3 3 0 0 0
.......................................................................................................GCCAGTCGTGGGACCTAGCCTT........................... 22 0 10 0.70 7 7 0 0 0
....................................................................................................CTAGCCAGTCGTGGGAGCTAGCCTT........................... 25 1 6 0.67 4 4 0 0 0
.................................................................CTTTCCAGCCTCCTGGATAACTAGT.............................................................. 25 0 18 0.67 12 12 0 0 0
....................................................................................................CTAGCCAGTCGTGGAAGCTAGCCTT........................... 25 2 6 0.67 4 4 0 0 0
.............................................................................CTGGATAACTAGTGCCCGACCCT.................................................... 23 0 5 0.60 3 0 3 0 0
....................................................................TCCAGCCTCCTGGATAACTAGT.............................................................. 22 0 19 0.58 11 11 0 0 0
......................................................................................................AGCCAGTCGTGGGACCTAGCCTTGGGT....................... 27 0 9 0.56 5 5 0 0 0
.....................................................................CCAGCCTCCTGGATAACTAGTGCC........................................................... 24 0 6 0.50 3 3 0 0 0
.....................................................................................................TAGCCAGTCGTGGAACCTAGCCT............................ 23 1 10 0.50 5 3 2 0 0
................................................................................................CCCTCTAGCCAGTCGTGGGGCCTAGCCT............................ 28 1 2 0.50 1 1 0 0 0
..................................................................................................CTCTAGCCAGTCGTGGGGCCTAGCCT............................ 26 1 2 0.50 1 1 0 0 0
.....................................................................CCAGCCTCCTGGATAACTAGTGCCCGA........................................................ 27 0 6 0.50 3 3 0 0 0
......................................................................CAGCCTCCTGGATAACTAGTGCC........................................................... 23 0 6 0.50 3 2 1 0 0
.........................................................................................................CAGTCGTGGGACCTAGCCTT........................... 20 0 10 0.40 4 3 1 0 0
.......................................................................................................GCCAGTCGTGGAACCTAGCCTT........................... 22 1 10 0.40 4 2 2 0 0
...................................................................................................TCTAGCCAGTCGTGGGACCTAGCCT............................ 25 0 6 0.33 2 2 0 0 0
..........................................................................................GCCCGACCCTCTAGCCAGTCGT........................................ 22 0 3 0.33 1 1 0 0 0
....................................................................................................CTAGCCAGTCGTGGGAACTAGCCTT........................... 25 1 6 0.33 2 2 0 0 0
...................................................................................AACTAGTGCCCGACCCTCTAGCCAGT........................................... 26 0 3 0.33 1 1 0 0 0
.......................................................................................AGTGCCCGACCCTCTAGCCAGTCGT........................................ 25 0 3 0.33 1 1 0 0 0
....................................................................................................CTAGCCAGTCGTGGGACCTAGCC............................. 23 0 6 0.33 2 2 0 0 0
.....................................................................................CTAGTGCCCGACCCTCTAGCCAGT........................................... 24 0 3 0.33 1 1 0 0 0
...................................................................................AACTAGTGCCCGACCCTCTAGCCA............................................. 24 0 3 0.33 1 1 0 0 0
.......................................................................................AGTGCCCGACCCTCTAGCCAGTCGTGG...................................... 27 0 3 0.33 1 1 0 0 0
..................................................................................................CTCTAGCCAGTCGTGGGACCT................................. 21 0 6 0.33 2 2 0 0 0
..........................................................................................GCCCGACCCTCTAGCCAGTCGTGGGAC................................... 27 0 3 0.33 1 1 0 0 0
......................................................................................................AGCCAGTCGTGGAACCTAGCCTT........................... 23 1 10 0.30 3 2 1 0 0
.............................................................CCCGCTTTCCAGCCTCCTGGATAACTAGT.............................................................. 29 0 14 0.29 4 4 0 0 0
...................................................................................................................ACCTAGCCTTGGGTTCCTGCCCGACCTT......... 28 0 4 0.25 1 1 0 0 0
....................................................................................................................CCTAGCCTTGGGTTCCTGCCCGACC........... 25 0 4 0.25 1 1 0 0 0
.....................................................................................................................CTAGCCTTGGGTTCCTACCCGACCT.......... 25 1 4 0.25 1 1 0 0 0
......................................................................................................................TAGCCTTGGGTTCCTGCCCGACCT.......... 24 0 4 0.25 1 1 0 0 0
........................................................................................................................GCCTTGGGTTCCTGCCCGACC........... 21 0 4 0.25 1 1 0 0 0
.....................................................................................................................ATAGCCTTGGGTTCCTGCCCGACC........... 24 1 4 0.25 1 1 0 0 0
.....................................................................................................................CTAGCCTTGGGTTCCTGCTCGAC............ 23 1 9 0.22 2 2 0 0 0
.......................................................................................................GCCAGTCGTGGGACCTAGCCTTGGGT....................... 26 0 9 0.22 2 2 0 0 0
......................................................................................................AGCCAGTCGTGGAACCTAGCCTTGGGT....................... 27 1 9 0.22 2 2 0 0 0
..................................................................TTTCCAGCCTCCTGGATAACTAG............................................................... 23 0 19 0.21 4 4 0 0 0
.....................................................................................................TAGCCAGTCGTGGGAGCTAGCCTT........................... 24 1 10 0.20 2 2 0 0 0
........................................................................GCCTCCTGGATAACTAGTGCCCGACCCT.................................................... 28 0 5 0.20 1 1 0 0 0
..........................................................................CTCCTGGATAACTAGTGGCCGACCCT.................................................... 26 1 5 0.20 1 1 0 0 0
.........................................................................CCTCCTGGATAACTAGTGCCCGACCCT.................................................... 27 0 5 0.20 1 1 0 0 0
..........................................................................................................GGTCGTGGGACCTAGCCTT........................... 19 1 10 0.20 2 1 1 0 0
..............................................................................TGGATAACTAGTGCCCGACCCT.................................................... 22 0 5 0.20 1 1 0 0 0
........................................................................................................CCAGTCGTGGAACCTAGCCTT........................... 21 1 10 0.20 2 0 2 0 0
..........................................................................CTCCTGGATAACTAGTGCCCGACCCT.................................................... 26 0 5 0.20 1 1 0 0 0
.....................................................................................................CAGCCAGTCGTGGAACCTAGCCTT........................... 24 2 10 0.20 2 0 2 0 0
...........................................................................TCCTGGATAACTAGTGCCCGACCCT.................................................... 25 0 5 0.20 1 1 0 0 0
................................................................................GATAACTAGTGCCCGACTCT.................................................... 20 1 5 0.20 1 0 0 1 0
.......................CTCGACCGGTGCCCCCCGCCCGGCT........................................................................................................ 25 0 17 0.18 3 3 0 0 0
....................................................................................................CTAGCCAGTCGTGGGATCTAGCCTT........................... 25 1 6 0.17 1 1 0 0 0
................................................................................................CCCTCTAGCCAGTCGGGGGACCT................................. 23 1 6 0.17 1 1 0 0 0
....................................................................................................CTAGCCAGTCGGGGGACCTAGCCTT........................... 25 1 6 0.17 1 1 0 0 0
....................................................................................................CTAACCAGTCGTGGATCCTAGCCT............................ 24 3 6 0.17 1 1 0 0 0
....................................................................................................CTAGCCAGTCGTGGATCCTAGCCT............................ 24 2 6 0.17 1 1 0 0 0
......................................................................CAGCCTCCTGGATAACTAGTGCCCG......................................................... 25 0 6 0.17 1 1 0 0 0
...................................................................................................TCTAGCCAGTCGTGGGAGCTAGCCTT........................... 26 1 6 0.17 1 1 0 0 0
...................................................................................................TCTAGCCAGTCGTGGAACCTAGCCCT........................... 26 2 6 0.17 1 1 0 0 0
...................................................................................................CCTAGCCAGTCGTGGAACCTAGCCTT........................... 26 2 6 0.17 1 0 1 0 0
....................................................................................................CTAGCCAGTCGTGGGGCCTAGCCT............................ 24 1 6 0.17 1 1 0 0 0
....................................................................................................CTCGCCAGTCGTGGAACCTAGCCTT........................... 25 2 6 0.17 1 0 1 0 0
....................................................................................................CTAGCCAGTCGTGGAACCTAGCCTA........................... 25 2 6 0.17 1 1 0 0 0
..........................................................................TTCCTGGATAACTAGTGCC........................................................... 19 1 6 0.17 1 1 0 0 0
....................................................................TCCAGCCTCCTGGATAACTAGTGCC........................................................... 25 0 6 0.17 1 1 0 0 0
....................................................................................................CTAACCAGTCGTGGAACCTAGCCTT........................... 25 2 6 0.17 1 1 0 0 0
................................................................................................CCCTCTAGCCAGTCGTGGGACCT................................. 23 0 6 0.17 1 1 0 0 0
....................................................................................................CTAGCCAGTCGTGGAATCTAGCCTT........................... 25 2 6 0.17 1 1 0 0 0
....................................................................................................CTAGCCAGTCGTGGGACCTAGCCTTG.......................... 26 0 6 0.17 1 1 0 0 0
....................................................................................................CAAGCCAGTCGTGGGACCTAGCCTT........................... 25 1 6 0.17 1 1 0 0 0
...................................................................................................TCTAGCCAGTCGGGGAACCTAGCCT............................ 25 2 6 0.17 1 1 0 0 0
....................................................................................................CTAGCCAGCCGTGGAACCTAGCCTT........................... 25 2 6 0.17 1 1 0 0 0
....................................................................................................CTAGCCAGTCGTGGTACCTAGCCTT........................... 25 1 6 0.17 1 1 0 0 0
....................................................................................................CTATCCAGTCGTGGAACCTAGCCTT........................... 25 2 6 0.17 1 1 0 0 0
.......................................................................AGCCTCCTGGATAACTAGTGCCCGA........................................................ 25 0 6 0.17 1 1 0 0 0
....................................................................................................CTAGCCAGTCGTGGAACCTAGCC............................. 23 1 6 0.17 1 1 0 0 0
...................................................................TTCCAGCCTCCTGGATAACTAGTG............................................................. 24 0 19 0.16 3 3 0 0 0
.....................................................................ACAGCCTCCTGGATAACTAGT.............................................................. 21 1 20 0.15 3 3 0 0 0
.....GGCTAGGTCTCTGCCCGCCTCGACC.......................................................................................................................... 25 0 20 0.15 3 2 0 1 0
...............................................................CGCTTTCCAGCCTCCTGGATAACTAGT.............................................................. 27 0 14 0.14 2 2 0 0 0
..................................................AAACCGTCCTGCCCGCTTTCCAGCCT............................................................................ 26 1 15 0.13 2 0 2 0 0
...................................................................................................TCTAGCCAGTCGTGGAAC................................... 18 1 16 0.13 2 2 0 0 0
.........................................................................................................CAGTCGTGGGACCTAGCCTTGGGTT...................... 25 0 9 0.11 1 1 0 0 0
........................................................................................................CCAGTCGTGGAACCTAGCCTTGGG........................ 24 1 9 0.11 1 1 0 0 0
.......................................................................................................GCCAGTCTTGGGACCTAGCCTTGGGT....................... 26 1 9 0.11 1 1 0 0 0
............................................................................................................TCGTGGAACCTAGCCTTGGGTT...................... 22 1 9 0.11 1 1 0 0 0
..........................................................................................................AGTCGTGGAACCTAGCCTTGGGT....................... 23 1 9 0.11 1 1 0 0 0
......................................................................................................AAACAGTCGTGGGACCTAGCCTTGGGT....................... 27 2 9 0.11 1 1 0 0 0
........................................................................................................AAAGTCGTGGGACCTAGCCTTGGGT....................... 25 2 9 0.11 1 1 0 0 0
.....................................................................................................................CTAGCCTTGGGTTCCTGCCCGAC............ 23 0 9 0.11 1 1 0 0 0
................................................................................................................GGAACCTAGCCTTGGGTTCCTGC................. 23 1 9 0.11 1 1 0 0 0
....................................................................................................................CCTAGCCTTGGATTCCTGCC................ 20 1 9 0.11 1 1 0 0 0
.........................................................................................................CAGTCGTGGAACCTAGCCTTGGGTT...................... 25 1 9 0.11 1 1 0 0 0
......................................................................................................AGCCAGTCGTGGGACCTAGCCTTGGG........................ 26 0 9 0.11 1 1 0 0 0
.........................................................................................................AAGTCGTGGAACCTAGCCTTGGGTT...................... 25 2 9 0.11 1 1 0 0 0
.................................................................................................................GGACCTAGCCTTGGGTTCCTGCCCG.............. 25 0 9 0.11 1 1 0 0 0
.................................................................................................................GGACCTAGCCTTGGGTTCCTGCCCGT............. 26 1 9 0.11 1 0 1 0 0
.................................................................................................................GAACCTAGCCTTGGGTTCCTGC................. 22 1 9 0.11 1 1 0 0 0
..............................................................................................................GTGGAACCTAGCCTTGGGTT...................... 20 1 9 0.11 1 1 0 0 0
...........................................................................................................GTCGTGGGACCTAGCCTTGGGT....................... 22 0 9 0.11 1 1 0 0 0
...........................................................................................................ATCGTGGGACCTAGCCTTGGGTTC..................... 24 1 9 0.11 1 1 0 0 0
....................................................................................................................CCTAGCCTTGGGTTCCTGCTCGA............. 23 1 9 0.11 1 1 0 0 0
...................................................................TTCCAGCCTCCTGGATAACTAG............................................................... 22 0 19 0.11 2 2 0 0 0
...................................................................TTCCAGCCTCCTGGGTAACTAGT.............................................................. 23 1 19 0.11 2 2 0 0 0
.......................................................................................................GCCGGTCGTGGAAGCTAGCCTT........................... 22 3 10 0.10 1 1 0 0 0
........................................................................................................CCAGTCGTGGAACCTAGCCTTG.......................... 22 1 10 0.10 1 1 0 0 0
.....................................................................................................AAGCCAGTCGTGGGAGCTAGCCTT........................... 24 2 10 0.10 1 1 0 0 0
.....................................................................................................AAGCCAGTCGTGGGACCTAGCCTT........................... 24 1 10 0.10 1 0 0 1 0
......................................................................................................AGCCAGTCGTGGGACCTAGCCTTG.......................... 24 0 10 0.10 1 1 0 0 0
......................................................................CAGCCTCCTGGATAACTAGT.............................................................. 20 0 20 0.10 2 1 1 0 0
.......................................................................................................AACAGTCGTGGGACCTAGCCTT........................... 22 2 10 0.10 1 1 0 0 0
.....................................................................................................TAGCCAGTCGTGGGACCTAGCCTTGG......................... 26 0 10 0.10 1 1 0 0 0
.......................................................................................................GCCAGTCGTGGGACCTAGCCT............................ 21 0 10 0.10 1 1 0 0 0
..........................................................................................................AGTCGTGGGACCTAGCCTT........................... 19 0 10 0.10 1 0 1 0 0
.....................................................................................................TAGCCAGTCGTGGAATCTAGCCTT........................... 24 2 10 0.10 1 1 0 0 0
.....................................................................CCAGCCTCCTGGATAACTAG............................................................... 20 0 20 0.10 2 2 0 0 0
......................................................................................................TGCCAGTCGTGGGACCTAGCCTT........................... 23 1 10 0.10 1 1 0 0 0
....................................................................................................TTAGCCAGTCGTGGAACCTAGCCT............................ 24 2 10 0.10 1 1 0 0 0
......................................................................................................AGCCAGTCGTGGGACCTAGCCT............................ 22 0 10 0.10 1 1 0 0 0
.....................................................................................................TAGCCAGTCGAGGGACCTAGCCTT........................... 24 1 10 0.10 1 0 1 0 0
.....GGCTAGGTCTCTGCCCGCCTCGAC........................................................................................................................... 24 0 20 0.10 2 2 0 0 0
.....................................................................................................TAGCCAGTCGTGGGATCTAGCCTT........................... 24 1 10 0.10 1 1 0 0 0
.......................................................................................................GCCAGTCGTGGGAGCTAGCCTT........................... 22 1 10 0.10 1 1 0 0 0
.......................................................................................................GCCAGTCGTGGAAACTAGCCTT........................... 22 2 10 0.10 1 1 0 0 0
.........................................................................................................CAGTCGTGGGACCTAGCCTTG.......................... 21 0 10 0.10 1 1 0 0 0
......................................................................CAGCCTCCTGGATAACTAGTGC............................................................ 22 0 20 0.10 2 2 0 0 0
......................................................................................................GGCCAGTCGTGGAACCTAGCCTT........................... 23 2 10 0.10 1 0 1 0 0
..........................................................................................................AGTCGTGGGACCTAGCCT............................ 18 0 10 0.10 1 1 0 0 0
.....................................................................................................CAGCCAGTCGTGGGACCTAGCCTT........................... 24 1 10 0.10 1 0 1 0 0
.............................................................................................CGACCCTCTAGCCAGTCGTGGGAC................................... 24 0 12 0.08 1 1 0 0 0
.............................................................TCCGCTTTCCAGCCTCCTGGAT..................................................................... 22 1 14 0.07 1 1 0 0 0
.............................................................CCCGCTTTCCAGCCTCCTGGATAACTAG............................................................... 28 0 14 0.07 1 1 0 0 0
..............................................................ACGCTTTCCAGCCTCCTGGATAACTAGT.............................................................. 28 1 14 0.07 1 1 0 0 0
................................................................GCTTTCCAGCCTCCTGGATAACTAG............................................................... 25 0 15 0.07 1 1 0 0 0
................................................................GCTTTCCAGCCTCCTGGTTAACTAGT.............................................................. 26 1 15 0.07 1 1 0 0 0
................................................................GCTTACCAGCCTCCTGGATAACTAGT.............................................................. 26 1 17 0.06 1 1 0 0 0
.......................TTCGACCGGTGCCCCCCGCCCGGCT........................................................................................................ 25 1 17 0.06 1 1 0 0 0
.......................ATCGACCGGTGCCCCCCGCCCGGCT........................................................................................................ 25 1 17 0.06 1 1 0 0 0
.................................................................CCTTCCAGCCTCCTGGATAACTAGT.............................................................. 25 1 18 0.06 1 1 0 0 0
.................................................................CTTTCCAGCCTCCTGGATAACTAG............................................................... 24 0 18 0.06 1 1 0 0 0
..................................................................TTTCCAGCCTCCTGGATAACTAGTC............................................................. 25 1 19 0.05 1 1 0 0 0
..................................................................TTTCCAGCCTCCTGGATAACTA................................................................ 22 0 19 0.05 1 1 0 0 0
....................................................................TCCAGCCTCCTGGATAACTAGTG............................................................. 23 0 19 0.05 1 1 0 0 0
...................................................................ATCCAGCCTCCTGGATAACTAGT.............................................................. 23 1 19 0.05 1 1 0 0 0
...................................................................TTCCAGCCTCCTGGTTAACTAGT.............................................................. 23 1 19 0.05 1 1 0 0 0
...................................................................TTCCAGCCTCCTGGATAACTAGA.............................................................. 23 1 19 0.05 1 1 0 0 0
..................................................................TTTCCAGCCTCCTGGATAACTAGTGA............................................................ 26 1 19 0.05 1 1 0 0 0
...................................................................TTTCAGCCTCCTGGATAACTAGT.............................................................. 23 1 19 0.05 1 0 1 0 0
..................................................................TTTCCAGCCTCCTGGATAAC.................................................................. 20 0 19 0.05 1 1 0 0 0
....................................................................TCCAGCCTCCTGGGTAACTAGT.............................................................. 22 1 19 0.05 1 1 0 0 0
..................................................................GTGCCAGCGTCCTGGATAA................................................................... 19 3 20 0.05 1 0 0 0 1
.............CTCTGCCCGCCTCGACCGGT....................................................................................................................... 20 0 20 0.05 1 1 0 0 0
.......CTAGGTCTCTGCCCGCCTCGACCGGT....................................................................................................................... 26 0 20 0.05 1 1 0 0 0
.....GGCTAGGTCTCTGCCCGCCTCG............................................................................................................................. 22 0 20 0.05 1 1 0 0 0
...ATGGCTAGGTCTCTGCCCGCCT............................................................................................................................... 22 2 20 0.05 1 1 0 0 0
.........AGGTCTCTGCCCGCCTCGACCGGTG...................................................................................................................... 25 0 20 0.05 1 1 0 0 0
..................................................................TTACCAGCCTCCTGGATAACTAGT.............................................................. 24 1 20 0.05 1 1 0 0 0
...................................................AACCGTCGTGCCCGCTTTCCAACCT............................................................................ 25 1 20 0.05 1 1 0 0 0
.......................CTCGACCGGTGCCCCCGGCCCGGCT........................................................................................................ 25 1 20 0.05 1 1 0 0 0
....................................................................ACCAGCCTCCTGGATAACTAGT.............................................................. 22 1 20 0.05 1 1 0 0 0
......................................................TGTCGTGCCCGCTTTCCAGCCTCC.......................................................................... 24 1 20 0.05 1 0 1 0 0
....TCGCTAGGTCTCTGCCCACCTCGACC.......................................................................................................................... 26 3 20 0.05 1 1 0 0 0
...TCGGCTAGGTCTCTGCCCGCCTCGA............................................................................................................................ 25 0 20 0.05 1 1 0 0 0
.........AGGTCTCTGCCCGCCTCGACCGGT....................................................................................................................... 24 0 20 0.05 1 1 0 0 0
........TAGGTCTCTGCCCGCCTCGACCGGT....................................................................................................................... 25 0 20 0.05 1 1 0 0 0
......GCTAGGTCTCTGCCCGCCTCGACCG......................................................................................................................... 25 0 20 0.05 1 1 0 0 0
AATTCGGCTAGGTCTCTG...................................................................................................................................... 18 1 20 0.05 1 1 0 0 0
........................................................................GCCTCCTGGATAACTAGT.............................................................. 18 0 20 0.05 1 1 0 0 0
...................................................................TGCCAGCCTCCTGGATAACTAGT.............................................................. 23 1 20 0.05 1 1 0 0 0
.......AAAGGTCTCTGCCCGCCTCGACCGGT....................................................................................................................... 26 2 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_84:219252-219403 + dpe_271 CTAAGCCGATCCAGAGACGGGCGGAGCTGGCCACGGGGGGCGGGCCGATCTTTGGCAGCACGGGCGAAAGGTCGGAGGACCTATTGATCACGGGCTGGGAGATCGGTCAGCACCCTGGATCGGAACCCAAGGACGGGCTGGAAGAAAAGGCA------------------------------
dp5 Unknown_group_304:5938-6089 - CTAAGCCGATCCAGAGACGTGCAGAGCTGGCCACGGGGGGCGGGCCGCAGTTTGGCAGCACGGGCGAAAGGTCGGAGGACCTATTGATCACGGGCTGGGAGATCGGTCAGCACCCTGGATCGGAACCCAAGGACGGGCTGGAAGAAAAGGCA------------------------------
droAna3 scaffold_9640:4756-4768 + -------------------------------------------------------------------------------------------------------------------------------------------GGAAGGAAAGGCC------------------------------
droBip1 scf7180000396091:10887-10967 + CGGA------------------------------------------------------------CGAGAGGTCCCAGAGGCCACTTG-----------------------------------------GAGGACGGCCCTGAAGATGGTGCATCTTGGCGCAGGTGAGAGCAACATGCTTCC
droFic1 scf7180000454136:16058-16081 - --------------------------------------------------------------------------------------------------------------------------------AAGGAAAGTTTGGAGGGAAAGAAA------------------------------
droRho1 scf7180000776719:5533-5557 - CA-------------------------------------------------------------------------------------------------------------------------------AAGGTGGGTTGAAAGAAAAAGCA------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
CTAAGCCGATCCAGAGACGGGCGGAGCTGGCCACGGGGGGCGGGCCGATCTTTGGCAGCACGGGCGAAAGGTCGGAGGACCTATTGATCACGGGCTGGGAGATCGGTCAGCACCCTGGATCGGAACCCAAGGACGGGCTGGAAGAAAAGGCA------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................CTATTGATCACGGGCTGGGAGA................................................................................2233.6711560000
................................................................................CTATTGATCACGGGCTGGGAG.................................................................................2132.678080000
...................................................................................................................TGGATCGGAACCCAAGGACGGGC............................................2392.56230230000
................................................................................CTATTGATCACGGGCTGGGAGAT...............................................................................2332.006150000
............................................................................................................AGCACCCTGGATCGGAACCCAAGGAC................................................2691.67151410000
...................................................................................................................TGGATCGGAACCCAAGGACGGG.............................................2291.44130130000
...................................................................................................................TGGATCGGAACCCAAGGACGG..............................................2191.11100100000
...................................................................................................................TGGATCGGAACCCAAGGACGGGCTG..........................................2591.009090000
...................................................................................................................TGGATCGGAACCCAAGGACGGGCTGG.........................................2640.753030000
................................................................................CTATTGATCACGGGCTGGGAGT................................................................................2230.672200000
................................................................................CTATTGATCACGGGCTGGGAGATCG.............................................................................2530.672020000
..................................................................................................................CTGGATCGGAACCCAAGGACGG..............................................2290.565320000
..................................................................................................................CTGGATCGGAACCCAAGGACGGG.............................................2390.565050000
...................................................................................................................TGGATCGGAACCCAAGGACGGGCT...........................................2490.444040000
..........................................................................................................TCAGCACCCTGGATCGGAACCCAAGGA.................................................2790.444040000
........ATCCAGAGACGGGCGGAGCTG.........................................................................................................................................................21200.357070000
................................................................................CTATTGATCACGGGCTGGGAGATC..............................................................................2430.331010000
.................................................................................TATTGATCACGGGCTGGGAG.................................................................................2030.331010000
.................................................................................TATTGATCACGGGCTGGGAGAT...............................................................................2230.331010000
..........................................................................................................TCAGCACCCTGGATCGGAACCCAAGG..................................................2690.333030000
..................................................................................................................CTGGATCGGAACCCAAGGACGGGC............................................2490.333030000
.................................................................................TATTGATCACGGGCTGGGAGATC..............................................................................2330.331010000
................................................................................CTATTGATCACGGGCTGGGAGAAA..............................................................................2430.331010000
.......................................................................................................................TCGGAACCCAAGGACGGGCTGGA........................................2340.251010000
.......................................................................................................................TCGGAACCCAAGGACGGGCTGGAA.......................................2440.251010000
.......................................................................................................................TCGGAACCCAAGGACGGGCTGG.........................................2240.251010000
................................................................................................................CCCTGGATCGGAACCCAAGGACGGGCT...........................................2790.222200000
...................................................................................................................TGGATCGGAACCCAAGGACG...............................................2090.222020000
............................................................................................................AGCACCCTGGATCGGAACCCAAGGACGG..............................................2890.222200000
.................................................................................TATTGATCACGGGCTGGGA..................................................................................1950.201010000
................................................................................CTATTGATCACGGGCTGGGA..................................................................................2050.201010000
................................................................................CTATTGATCACGGGCTGG....................................................................................1860.171010000
........ATCCAGAGACGGGCGGAGC...........................................................................................................................................................19200.153210000
........ATCCAGAGACGGGCGGAGCTGGC.......................................................................................................................................................23200.153030000
..................................................TTTGGCAGCACGGGCGAAAGGTC.............................................................................................................23150.132200000
...................................................................................................................TGGATCGGAACCCAAGGAC................................................1990.111010000
.............................................................................................................GCACCCTGGATCGGAACCCAAGGAC................................................2590.111100000
..................................................................................................................................GGACGGGCTGGAAGAAAAGGC...............................2190.111010000
..........................................................................................................TCAGCACCCTGGATCGGAACCCAAG...................................................2590.111010000
................................................................................................................CCCTGGATCGGAACCCAAGGACGG..............................................2490.111010000
................................................................................................................CCCTGGATCGGAACCCAAGGACGGGC............................................2690.111100000
....................................................................................................................GGATCGGAACCCAAGGACGGGC............................................2290.111010000
..........................................................................................................TCAGCACCCTGGATCGGAACCCAA....................................................2490.111010000
............................................................................................................AGCACCCTGGATCGGAACCCAAGGA.................................................2590.111010000
..........................................................................................................TCAGCACCCTGGATCGGAACCCAAGGAC................................................2890.111100000
....................................................................................................................GGATCGGAACCCAAGGACGG..............................................2090.111010000
..........................................................................................................TCAGCACCCTGGATCGGAACCCAAGGAA................................................2890.111010000
.................................................................................................................CCTGGATCGGAACCCAAGGACGG..............................................2390.111010000
.........TCCAGAGACGGGCGGAGCTGGC.......................................................................................................................................................22200.102020000
........ATCCAGAGACGGGCGGAG............................................................................................................................................................18200.102020000
..................................................TTTGGCAGCACGGGCGAAAGG...............................................................................................................21150.071010000
..................................................TTTGGCAGCACGGGCGAAAGGTCGT...........................................................................................................25150.071100000
..................................................TTTGGCAGCACGGGCGAAAGGTCG............................................................................................................24150.071010000
..........CCAGAGACGGGCGGAGCTGGC.......................................................................................................................................................21200.051010000
....................................................TGGCAGCACGGGCGAAAGGTC.............................................................................................................21200.051010000
.TAAGCCGATCCAGAGACGGGCGTCT............................................................................................................................................................25200.051000001
...................................................TTGGCAGCACGGGCGAAAGGTCG............................................................................................................23200.051010000
....................................................TGGCAGCACGGGCGAAAGG...............................................................................................................19200.051010000
........ATCCAGAGACGGGCGGAGCTGA........................................................................................................................................................22200.051010000
.........TCCAGAGACGGGCGGAGCTGG........................................................................................................................................................21200.051010000
....................................................TGGCAGCACGGGCGAAAGGTCGGA..........................................................................................................24200.051010000
..AAGCCGATCCAGAGACGG..................................................................................................................................................................18200.051010000
...................................................TTGGCAGCACGGGCGAAAGG...............................................................................................................20200.051010000
...........................................................ACGGGCGAAAGGTCGGAGGA.......................................................................................................20200.051010000
dp5
CTAAGCCGATCCAGAGACGTGCAGAGCTGGCCACGGGGGGCGGGCCGCAGTTTGGCAGCACGGGCGAAAGGTCGGAGGACCTATTGATCACGGGCTGGGAGATCGGTCAGCACCCTGGATCGGAACCCAAGGACGGGCTGGAAGAAAAGGCA------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................CTGGATCGGAACCCAAGGACGG..............................................22310.003006000002400
...............................................................................................TGGGAGATCGGTCAGCACCCTGGA...............................................................2417.0070700000000
..................................................................................................................CTGGATCGGAACCCAAGGACGGG.............................................2336.001802000001600
...................................................................................TTGATCACGGGCTGGGAGATCGG............................................................................2314.0040300000100
...............................................................................................TGGGAGATCGGTCAGCACCCTG.................................................................2214.0040400000000
...................................................................................................................TGGATCGGAACCCAAGGACGG..............................................2133.67110300000800
...............................................................................................TGGGAGATCGGTCAGCACCCTGG................................................................2313.0030300000000
..................................................................................................................CTGGATCGGAACCCAAGGACG...............................................2132.6780200000600
...................................................................................................................TGGATCGGAACCCAAGGACGGGC............................................2332.6780200000600
...................................................................................TTGATCACGGGCTGGGAGATCG.............................................................................2212.0020200000000
..................................................TTTGGCAGCACGGGCGAAAGGTC.............................................................................................................2312.0020200000000
..................................................................................................................CTGGATCGGAACCCAAGGACGGGC............................................2432.0060100000500
.......................................................................TCGGAGGACCTATTGATCACGGGC.......................................................................................2421.5030300000000
...................................................................................................................TGGATCGGAACCCAAGGAC................................................1931.3340400000000
...................................................................................................................TGGATCGGAACCCAAGGACGGG.............................................2231.3340100000300
...................................................................................................AGATCGGTCAGCACCCTGGATC.............................................................2281.25100900000100
...................................................................................................AGATCGGTCAGCACCCTGGATCG............................................................2381.1390810000000
.........................................................................GGAGGACCTATTGATCACGGGC.......................................................................................2221.0020200000000
..................................................TTTGGCAGCACGGGCGAAAGGTCG............................................................................................................2411.0010100000000
...............................................................................................TGGGAGATCGGTCAGCACCC...................................................................2011.0010100000000
...............................................................................................TGGGAGATCGGTCAGCAC.....................................................................1811.0010100000000
..................................................TTTGGCAGCACGGGCGAAAGG...............................................................................................................2121.0020100001000
.......................................................................................................................TCGGAACCCAAGGACGGGCTGGAAA......................................2511.0010100000000
.............................................................................GACCTATTGATCACGGGCTGGGAA.................................................................................2411.0010100000000
........................................................................................CACGGGCTGGGAGATCGGTC..........................................................................2011.0010010000000
..................................................................................................................CTGGATCGGAACCCAAGGAC................................................2030.6720200000000
................................................................................................................CCCTGGATCGGAACCCAAGGACGGGC............................................2630.6720000000200
......................................................................................................................ATCGGAACCCAAGGACGGGCTG..........................................2230.6720000000200
.......................................................................................................................TCGGAACCCAAGGACGGGCTG..........................................2130.6720200000000
.............................................................................................................GCACCCTGGATCGGAACCCAAGGA.................................................2430.6720200000000
...........................................................................AGGACCTATTGATCACGGGCT......................................................................................2120.5010100000000
.......................................................................TCGGAGGACCTATTGATCACGGG........................................................................................2320.5010100000000
...............................................................GCGAAAGGTCGGAGGACCTATTGAAA.............................................................................................2620.5010100000000
........................................................................CGGAGGACCTATTGATCACGGGC.......................................................................................2320.5010100000000
.........................................................................GGAGGACCTATTGATCACGGGCTG.....................................................................................2420.5010100000000
..........................................................................GAGGACCTATTGATCACGGGCT......................................................................................2220.5010100000000
....................................................................................................GATCGGTCAGCACCCTGGATCG............................................................2280.5040400000000
.............................................................................GACCTATTGATCACGGGCTGG....................................................................................2120.5010100000000
...................................................................................................AGATCGGTCAGCACCCTGGATCGGAA.........................................................2680.5040300000100
.............................................................................GACCTATTGATCACGGGCTG.....................................................................................2020.5010100000000
..................................................TTTGGCAGCACGGGCGAAAGGT..............................................................................................................2220.5010100000000
.........................................................GCACGGGCGAAAGGTCGGAGG........................................................................................................2150.4020200000000
...................................................TTGGCAGCACGGGCGAAA.................................................................................................................1850.4020200000000
...................................................................................................AGATCGGTCAGCACCCTGGATCGG...........................................................2480.3830300000000
...................................................................................................AGATCGGTCAGCACCCTGGAT..............................................................2180.3830200000100
....................................................TGGCAGCACGGGCGAAAGGTCGGA..........................................................................................................2430.3310100000000
...................................................TTGGCAGCACGGGCGAAAGGTCG............................................................................................................2330.3310100000000
................................................................................................................CCCTGGATCGGAACCCAAGGACG...............................................2330.3310100000000
..............................................................................................................CACCCTGGATCGGAACCCAAGGACGGGC............................................2830.3310100000000
.......................................................................................................................TCGGAACCCAAGGACGGAA............................................1930.3310100000000
....................................................................................................................GGATCGGAACCCAAGGACGGGC............................................2230.3310100000000
.................................................................................................................CCTGGATCGGAACCCAAGGAC................................................2130.3310100000000
....................................................TGGCAGCACGGGCGAAAGGTCGG...........................................................................................................2330.3310100000000
...........................................................................................................CAGCACCCTGGATCGGAACCCAAGGA.................................................2630.3310100000000
....................................................TGGCAGCACGGGCGAAAGGTCGT...........................................................................................................2330.3310100000000
.............................................................................................................GCACCCTGGATCGGAACCCAAGG..................................................2330.3310100000000
.............................................................................................................GCACCCTGGATCGGAACCCA.....................................................2030.3310100000000
....................................................................................................GATCGGTCAGCACCCTGGATCGGAACCC......................................................2830.3310010000000
...............................................................................................................ACCCTGGATCGGAACCCAAGGACGGGC............................................2730.3310100000000
...................................................................................................................TGGATCGGAACCCAAGGACGAC.............................................2230.3310100000000
...................................................................................................................TGGATCGGAACCCAAGGACGGGCT...........................................2430.3310100000000
....................................................................................................................GGATCGGAACCCAAGGACG...............................................1930.3310100000000
....................................................TGGCAGCACGGGCGAAAGGTCGGAA.........................................................................................................2530.3310000100000
.............................................................................................................GCACCCTGGATCGGAACCC......................................................1930.3310100000000
...................................................................................................................TGGATCGGAACCCAAGGA.................................................1830.3310100000000
...................................................................................................AGATCGGTCAGCACCCTGG................................................................19100.3030300000000
...................................................................................................AGATCGGTCAGCACCCTGGA...............................................................20100.3030300000000
....................................................TGGCAGCACGGGCGAAAGGA..............................................................................................................2040.2510100000000
...................................................................................................AGATCGGTCAGCACCCTGGATCGGAACC.......................................................2880.2520200000000
...................................................................................................AGATCGGTCAGCACCCTGGATCGGAAC........................................................2780.2520200000000
..........................................................CACGGGCGAAAGGTCGGAGG........................................................................................................2050.2010100000000
............................................................CGGGCGAAAGGTCGGAGGACCT....................................................................................................2250.2010100000000
.........................................................GCACGGGCGAAAGGTCGGAGGA.......................................................................................................2250.2010100000000
.........................................................GCACGGGCGAAAGGTCGGAGGACC.....................................................................................................2450.2010100000000
..........................................................CACGGGCGAAAGGTCGGAT.........................................................................................................1950.2010100000000
..........................................................CACGGGCGAAAGGTCGGA..........................................................................................................1850.2010100000000
....................................................TGGCAGCACGGGCGAAAGG...............................................................................................................1950.2010100000000
...................................................................................................................TGGATCGGAACCCAAGGAAAA..............................................2170.1410100000000
....................................................................................................GATCGGTCAGCACCCTGGATCGT...........................................................2380.1310100000000
......................................................................................................TCGGTCAGCACCCTGGATCGGA..........................................................2280.1310100000000
...................................................................................................AGATCGGTCAGCACCCTGGATCGGA..........................................................2580.1310100000000
.....................................................................................................ATCGGTCAGCACCCTGGATC.............................................................2080.1310100000000
....................................................................................................GATCGGTCAGCACCCTGGATC.............................................................2180.1310100000000
....................................................................................................GATCGGTCAGCACCCTGGAT..............................................................2080.1310100000000
...................................................................................................AGATCGGTCAGCACCCTGGATT.............................................................2290.1110100000000
.....................................................GGCAGCACGGGCGAAAGGT..............................................................................................................1990.1110100000000
.....................................................GGCAGCACGGGCGAAAGGTA.............................................................................................................2090.1110100000000
...................................................................................................AGATCGGTCAGCACCCTGGAA..............................................................21100.1010100000000
droAna3
-------------------------------------------------------------------------------------------------------------------------------------------GGAAGGAAAGGCC------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
CGGA------------------------------------------------------------CGAGAGGTCCCAGAGGCCACTTG-----------------------------------------GAGGACGGCCCTGAAGATGGTGCATCTTGGCGCAGGTGAGAGCAACATGCTTCCSizeHit CountTotal NormTotal
No Reads
droFic1
--------------------------------------------------------------------------------------------------------------------------------AAGGAAAGTTTGGAGGGAAAGAAA------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CA-------------------------------------------------------------------------------------------------------------------------------AAGGTGGGTTGAAAGAAAAAGCA------------------------------SizeHit CountTotal NormTotal
No Reads

Generated: 05/15/2015 at 03:07 PM