ID:

dpe_269

 Coordinate:

scaffold_186:44628-44692 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-30.1 -30.0

Flybase annnotation

Antisense to intron [Dper\GL22370-in]

Repeatable elements

NameClassFamilyStrand
Gypsy13-I_Dpse-intLTRGypsy-
mature
  1. scaffold_253:6310-6332 +
  2. dpe_269  scaffold_186:44629-44651 -
star

Sense Strand Reads

TTTGTGAGTGAGTTTTTTTTGTGCTTTATGCCACTCCCTATCGGAGTTTTCGTTCCAGGTCCGATTCTCCTCCGGAAAGCGCTTTCGTCGGTGGACATGCGGATCTGCGGGTGAGTGCGAAGGAGAAATGTAAAAGACCCAACTCAAACGATTTGACTCGAGTCC
***********************************.(((.(((.....(((((((((((((((....(((.(((((((....))))..))).)))....)))))))).)))))))..))))))......************************************ 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V057
head
 V111
male body		 V042
embryo
...........................................................................................TGGACATGCGGATCTGCGGGTGA................................................... 23 0 2 6.50 13 11 0 1 1
..........................................................................................GTGGACATGCGGATCTGCGGG...................................................... 21 0 2 3.50 7 7 0 0 0
..........................................................................................GTGGACATGCGGATCTGCGGGTG.................................................... 23 0 2 2.50 5 5 0 0 0
..........................................................................................GTGGACATGCGGATCTGCGG....................................................... 20 0 2 2.50 5 5 0 0 0
...........................................................................................TGGACATGCGGATCTGCGGGT..................................................... 21 0 2 2.00 4 4 0 0 0
..................................................CGTTCCAGGTCCGATTCTCCTCC............................................................................................ 23 0 1 2.00 2 2 0 0 0
...........................................................................................TGGACATGCGGATCTGCGGGTGAG.................................................. 24 0 2 2.00 4 4 0 0 0
...........................................................................................TGGACATGCGGATCTGCGGG...................................................... 20 0 2 1.50 3 3 0 0 0
..........................................................................................GTGGACATGCGGATCTGCGGGT..................................................... 22 0 2 1.50 3 3 0 0 0
...........................................................................................TGGACATGCGGATCTGCGGGTG.................................................... 22 0 2 1.50 3 3 0 0 0
......................................................................TCCGGAAAGCGCTTTCGTCGGTGGACA.................................................................... 27 0 1 1.00 1 1 0 0 0
........................................................................................................................................ACCCAACTCAAACGATTTG.......... 19 0 1 1.00 1 1 0 0 0
..................................................CGTTCCAGGTCCGATTCTCCTCCG........................................................................................... 24 0 1 1.00 1 1 0 0 0
.....................TGCTTTATGCCACTCCCTATCGG......................................................................................................................... 23 0 1 1.00 1 1 0 0 0
....................................................TTCCAGGTGCGATTCTCCTCC............................................................................................ 21 1 1 1.00 1 1 0 0 0
..................................................................................................................................TAAAAGACCCAACTCAAACGA.............. 21 0 1 1.00 1 1 0 0 0
.....................TGCTTTATGCCACTCCCTATCG.......................................................................................................................... 22 0 1 1.00 1 1 0 0 0
..............................................................................................................................................CTCAAACGATTTGACTCGAGTC. 22 0 1 1.00 1 1 0 0 0
...........................................................................................TGGACATGGGGATCTGCGGGTGA................................................... 23 1 2 1.00 2 2 0 0 0
.......................................................CAGGTCCGATTCTCCTCCGGA......................................................................................... 21 0 1 1.00 1 1 0 0 0
........................................................................................................................................ACCCAACTCAAACGATTTGACTCGAG... 26 0 1 1.00 1 1 0 0 0
..................................................CGTTCCAGGTCCGATTCTCCTC............................................................................................. 22 0 1 1.00 1 1 0 0 0
............................................................................................GGACATGCGGATCTGCGGGTGAG.................................................. 23 0 2 1.00 2 2 0 0 0
...........................................................................AAAGCGCTTTCGTCGGTGGACATG.................................................................. 24 0 1 1.00 1 1 0 0 0
..................................................CGTTCCAGGTCCGATTCTCCTCCGGA......................................................................................... 26 0 1 1.00 1 1 0 0 0
.........................................................................................................TGCGGGTGAGTGCGAAGGAGAA...................................... 22 0 1 1.00 1 1 0 0 0
..........................................................................................GTGGACATGCGGATCTGCG........................................................ 19 0 2 1.00 2 2 0 0 0
...........................................................................................TGGACATGCGGATCTGCGGGTGAGT................................................. 25 0 2 0.50 1 1 0 0 0
..........................................................................................GTGGACATTCGGATCTGCGGGTGAG.................................................. 25 1 2 0.50 1 1 0 0 0
...........................................................................................TGGACATGCGGATCTGCG........................................................ 18 0 2 0.50 1 1 0 0 0
............................................................................................GGACATGCGGATCTGCGGG...................................................... 19 0 2 0.50 1 1 0 0 0
..............................................................................................ACATGCGGATCTGCGGGT..................................................... 18 0 2 0.50 1 1 0 0 0
............................................................................................................................................AACTCAAAGGAATTGACTCG..... 20 2 3 0.33 1 0 1 0 0
.....................................................................................................GATCTGCGGGTGAATGCGG............................................. 19 2 4 0.25 1 0 1 0 0
.........................................................................GTAAAGCACTTTCGTCGGG......................................................................... 19 3 20 0.10 2 1 0 1 0
.........................................................................GTAAAGCACTTTCGGCGGTG........................................................................ 20 3 14 0.07 1 0 0 1 0
.......................................................................................................TCAGCGGGGTAGTGCGAAG........................................... 19 3 14 0.07 1 0 1 0 0
.............................................................................................................GATGATTGCGAAGGAGACA..................................... 19 3 20 0.05 1 0 0 1 0
.........................................................................GGAAAGCACTTTCGGCGGG......................................................................... 19 3 20 0.05 1 0 1 0 0

Anti-sense strand reads

AAACACTCACTCAAAAAAAACACGAAATACGGTGAGGGATAGCCTCAAAAGCAAGGTCCAGGCTAAGAGGAGGCCTTTCGCGAAAGCAGCCACCTGTACGCCTAGACGCCCACTCACGCTTCCTCTTTACATTTTCTGGGTTGAGTTTGCTAAACTGAGCTCAGG
************************************.(((.(((.....(((((((((((((((....(((.(((((((....))))..))).)))....)))))))).)))))))..))))))......*********************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V111
male body		 V042
embryo
............................................................................TTCGCGAAAGCAGCCACCTGTACGC................................................................ 25 0 1 139.00 139 139 0 0 0
............................................................................TTCGCGAAAGCAGCCACCTGTACG................................................................. 24 0 1 92.00 92 92 0 0 0
..................................AGGGATAGCCTCAAAAGCAAGGTCCA......................................................................................................... 26 0 1 67.00 67 62 3 2 0
...................................GGGATAGCCTCAAAAGCAAGGTCCA......................................................................................................... 25 0 1 31.00 31 31 0 0 0
....................................GGATAGCCTCAAAAGCAAGGTCCA......................................................................................................... 24 0 1 18.00 18 17 0 1 0
.........................................................................CCTTTCGCGAAAGCAGCCACCTGTACG................................................................. 27 0 1 17.00 17 17 0 0 0
.............................................................................TCGCGAAAGCAGCCACCTGTACGC................................................................ 24 0 2 13.50 27 26 0 0 1
..........................................................................CTTTCGCGAAAGCAGCCACCTGTACG................................................................. 26 0 1 12.00 12 12 0 0 0
.........................................................................CCTTTCGCGAAAGCAGCCACCTGTACGC................................................................ 28 0 1 8.00 8 8 0 0 0
.................................GAGGGATAGCCTCAAAAGCAAGGTCCA......................................................................................................... 27 0 1 7.00 7 5 0 2 0
.........................................................................................................................CCTCTTTACATTTTCTGGGTTGAGT................... 25 0 1 7.00 7 7 0 0 0
...........................................................................TTTCGCGAAAGCAGCCACCTGTACGC................................................................ 26 0 1 6.00 6 6 0 0 0
..................................AGGGATAGCCTCAAAAGCAAGGTCC.......................................................................................................... 25 0 1 6.00 6 6 0 0 0
..........................................................................CTTTCGCGAAAGCAGCCACCTGTACGC................................................................ 27 0 1 5.00 5 5 0 0 0
..........................................CCTCAAAAGCAAGGTCCAGGCTAAG.................................................................................................. 25 0 1 5.00 5 0 5 0 0
.............................................CAAAAGCAAGGTCCAGGCTAAGAGGAG............................................................................................. 27 0 1 5.00 5 0 5 0 0
..................................AGGGATAGCCTCAAAAGGAAGGTCCA......................................................................................................... 26 1 1 5.00 5 5 0 0 0
.....................................................................GAGGCCTTTCGCGAAAGCAGCCAC........................................................................ 24 0 1 4.00 4 4 0 0 0
...........................................................................TTTCGCGAAAGCAGCCACCTGTACG................................................................. 25 0 1 4.00 4 4 0 0 0
............................................................................TTCGCGAAAGCAGCCAACTGTACGC................................................................ 25 1 1 4.00 4 4 0 0 0
.................................................AGCAAGGTCCAGGCTAAGAGGAGG............................................................................................ 24 0 1 4.00 4 0 4 0 0
...........................................CTCAAAAGCAAGGTCCAGGCTAAGAG................................................................................................ 26 0 1 4.00 4 0 4 0 0
..............................................................................CGCGAAAGCAGCCACCTGTACGC................................................................ 23 0 2 4.00 8 8 0 0 0
...................................GGGATAGCCTCAAAAGCAAGGTCC.......................................................................................................... 24 0 1 4.00 4 4 0 0 0
............................................................................TTCGCGAAAGCAGCCGCCTGTACG................................................................. 24 1 1 4.00 4 4 0 0 0
.............................................................................TCGCGAAAGCAGCCACCTGTACG................................................................. 23 0 2 3.00 6 6 0 0 0
............................................................................TTCGCGAAAGCAGCCAGCTGTACGC................................................................ 25 1 1 3.00 3 3 0 0 0
.......................................................................................................................TTCCTCTTTACATTTTCTGGGTTGAGT................... 27 0 1 3.00 3 3 0 0 0
.....................................GATAGCCTCAAAAGCAAGGTCCAGGC...................................................................................................... 26 0 1 3.00 3 3 0 0 0
............................................................................TTCGCGAAAGCAGCCACCTGTACGCC............................................................... 26 0 1 3.00 3 3 0 0 0
..................................................................................................................CACGCTTCCTCTTTACATTTTCTGGGT........................ 27 0 1 3.00 3 3 0 0 0
.........................................................................CCTTTCGCGAAAGCAGCCACCTGTAC.................................................................. 26 0 1 2.00 2 2 0 0 0
............................................................................TTCGCGAAAGCAGCCACCTGTACGG................................................................ 25 1 1 2.00 2 2 0 0 0
......................................ATAGCCTCAAAAGCAAGGTCCAGGC...................................................................................................... 25 0 1 2.00 2 2 0 0 0
........................................AGCCTCAAAAGCAAGGTCCAGGC...................................................................................................... 23 0 1 2.00 2 2 0 0 0
........................................................................................................................TCCTCTTTACATTTTCTGGGTTGAGT................... 26 0 1 2.00 2 2 0 0 0
..................................................GCAAGGTCCAGGCTAAGAGGAGGCC.......................................................................................... 25 0 1 2.00 2 0 2 0 0
............................................................................TTCGCGAAAGCAGCCACCTGTAC.................................................................. 23 0 1 2.00 2 2 0 0 0
....................................GGATAGCCTCAAAAGCAAGGTCCAGGC...................................................................................................... 27 0 1 2.00 2 2 0 0 0
.......................................TAGCCTCAAAAGCAAGGTCCAGGC...................................................................................................... 24 0 1 2.00 2 1 1 0 0
...........................................................................................................................TCTTTACATTTTCTGGGTTGAGT................... 23 0 1 2.00 2 2 0 0 0
....................................................AAGGTCCAGGCTAAGAGGAGGCCT......................................................................................... 24 0 1 2.00 2 2 0 0 0
.....................................GATAGCCTCAAAAGCAAGGTCC.......................................................................................................... 22 0 1 2.00 2 2 0 0 0
......TCACTCAAAAAAAACACGAAATACGGT.................................................................................................................................... 27 0 1 2.00 2 2 0 0 0
...................................................CAAGGTCCAGGCTAAGAGGAGG............................................................................................ 22 0 1 2.00 2 0 2 0 0
...............................................................................GCGAAAGCAGCCACCTGTACGC................................................................ 22 0 2 2.00 4 4 0 0 0
..................................AGGGATAGCCTCAAAAGCAATGTCCA......................................................................................................... 26 1 1 2.00 2 2 0 0 0
....................................GGATAGCCTCAAAAGCAAGGTCC.......................................................................................................... 23 0 1 2.00 2 2 0 0 0
..............................................................................CGCGAAAGCAGCCACCTGGACGCCTAG............................................................ 27 1 1 1.00 1 1 0 0 0
............................................................................TACGCGAAAGCAGCCACCTGTACGC................................................................ 25 1 1 1.00 1 1 0 0 0
...................................................CAAGGTCCAGGCTAAGGGGAGGCCT......................................................................................... 25 1 1 1.00 1 1 0 0 0
......................................ATAGCCTCAAAAGCAAGGTCCAGGCT..................................................................................................... 26 0 1 1.00 1 1 0 0 0
.................................................................................GAAAGCAGCCACCTGTACGCCTAGAC.......................................................... 26 0 1 1.00 1 1 0 0 0
.....................................................................................GCAGCCACCTGTACGCCTAGACGCCCACT................................................... 29 0 1 1.00 1 1 0 0 0
.........................................................CCAGGCTAAGAGGAGGCCTTTCGCGAA................................................................................. 27 0 1 1.00 1 1 0 0 0
...........................................AACAAAAGCAAGGTCCAGGCTAAGAGG............................................................................................... 27 2 1 1.00 1 0 1 0 0
......................................................................AGGCCTTTCGCGAAAGGAGCCACCT...................................................................... 25 1 1 1.00 1 1 0 0 0
............................................................GGCTAAGAGGAGGCCTTTCGCGAAA................................................................................ 25 0 1 1.00 1 1 0 0 0
........ACTCAAAAAAAACACGGAATACGGT.................................................................................................................................... 25 1 1 1.00 1 1 0 0 0
......................................................................................................TAGACGCCCACTCACGCTT............................................ 19 0 1 1.00 1 1 0 0 0
.......................................................................................AGCCACCTGTACGCCTAGACGCCCACT................................................... 27 0 1 1.00 1 1 0 0 0
............................................................................TTCTCGAAAGCAGCCACCTGTACGC................................................................ 25 1 1 1.00 1 1 0 0 0
......................................ATAGCCTCAAAAGGAAGGTCCA......................................................................................................... 22 1 1 1.00 1 1 0 0 0
............................................................................TTCGCGAAAGCAGCCCCCTGTACG................................................................. 24 1 1 1.00 1 1 0 0 0
........................................................TCCAGGCTAAGAGGAGGCCT......................................................................................... 20 0 1 1.00 1 1 0 0 0
......TCACTCAAAAAAAACACGAAATACGG..................................................................................................................................... 26 0 1 1.00 1 1 0 0 0
....................................................................................................................CGCTTCCTCTTTACATTTTCTGGGT........................ 25 0 1 1.00 1 1 0 0 0
..............................................................................CGCGAAAGCAGCCACCTGTACGCCT.............................................................. 25 0 1 1.00 1 1 0 0 0
.........................................................CCAGGCTAAGAGGAGGCCTTTCGC.................................................................................... 24 0 1 1.00 1 0 1 0 0
..............................................AAAAGCAAGGTCCAGGCTAAGAGGAG............................................................................................. 26 0 1 1.00 1 0 1 0 0
................AAAACACGAAATACGGTGAGGGA.............................................................................................................................. 23 0 1 1.00 1 1 0 0 0
...................................GGGATAGCCTCAAAAGCAAGGT............................................................................................................ 22 0 1 1.00 1 1 0 0 0
...CACCCACTCAAAAAAAGCACGAAAT......................................................................................................................................... 25 2 1 1.00 1 1 0 0 0
.................................GAGGGATAGCCTCAAAAGCAAGGTCC.......................................................................................................... 26 0 1 1.00 1 1 0 0 0
............................................................................................................CCCAGTCACGCTTCCTCTTTACATTT............................... 26 1 1 1.00 1 1 0 0 0
..ACACTCACTCAAAAAAAGCACGAAAT......................................................................................................................................... 26 1 1 1.00 1 1 0 0 0
..........................................................................................................................CTCTTTACATTTTCTGGGTTGAGT................... 24 0 1 1.00 1 1 0 0 0
.........................................................CCAGGCTAAGAGGAGGCCT......................................................................................... 19 0 1 1.00 1 1 0 0 0
..........................................................................GGTTCGCGAAAGCAGCCACCTGTACGC................................................................ 27 2 1 1.00 1 1 0 0 0
........................................................................GCCTTTCGCGAAAGCAGCCACCTGTACG................................................................. 28 0 1 1.00 1 1 0 0 0
...........................................................................ATTCGCGAAAGCAGCCACCTGTACGC................................................................ 26 1 1 1.00 1 1 0 0 0
.................................................................................................ACGCCTAGACGCCCACTCACGCTTCC.......................................... 26 0 1 1.00 1 1 0 0 0
.................................................................................GAAAGCAGCCACCTGTACGCCTAGACG......................................................... 27 0 1 1.00 1 1 0 0 0
.......................................................................................................AGACGCCCACTCACGCTTCCTCTTTACA.................................. 28 0 1 1.00 1 1 0 0 0
......................................ATAGCCTCAAAAGCAAGGTCCA......................................................................................................... 22 0 1 1.00 1 1 0 0 0
............................................................................TTCGCGAAAGCGGCCACCTGTACGC................................................................ 25 1 1 1.00 1 1 0 0 0
.............................................................GCTAAGAGGAGGCCTTTCGCGAA................................................................................. 23 0 1 1.00 1 1 0 0 0
.............................................................................................................CCACTCACGCTTCCTCTTTACAT................................. 23 0 1 1.00 1 1 0 0 0
..................................AGGGATAGCCTCAAAAGCAAGGTC........................................................................................................... 24 0 1 1.00 1 1 0 0 0
..............................................................................CGCGAAAGCAGCCACCTGTACGCCTAG............................................................ 27 0 1 1.00 1 1 0 0 0
.........................................................................................................ACGCCCACTCACGCTTCCTCT....................................... 21 0 1 1.00 1 1 0 0 0
.................AAACACGAAATACGGTGAGGGAT............................................................................................................................. 23 0 1 1.00 1 1 0 0 0
............................................................................TTCGCGAAAGCAGCCACCTGTACGCCTA............................................................. 28 0 1 1.00 1 1 0 0 0
.......................................................................................................................................CTGGGTTGAGTTTGCTAAACTGAGC..... 25 0 1 1.00 1 0 1 0 0
..................................AGGGATAGCCTCAAAAGCAAGGTCGA......................................................................................................... 26 1 1 1.00 1 1 0 0 0
...................................GGGATAGCCTCAAAAGGAAGGTCCA......................................................................................................... 25 1 1 1.00 1 1 0 0 0
..........................................CCTCAAAAGCAAAGTCCAGGCTAAG.................................................................................................. 25 1 1 1.00 1 0 1 0 0
..............AAAAGACACGAAATACGGTGAGGGAT............................................................................................................................. 26 1 1 1.00 1 1 0 0 0
..................................AGGGATAGCCTCAAAAGCAAGGTCCAGGC...................................................................................................... 29 0 1 1.00 1 0 1 0 0
.........................................................................................................................CCTCTTTACATTTTCTGGGTTGAG.................... 24 0 1 1.00 1 1 0 0 0
.........................................................................ATTTTCGCGAAAGCAGCCAGCTGTACGC................................................................ 28 3 1 1.00 1 1 0 0 0
..................................AGAGATAGCCTCAAAAGCAAGGTCCA......................................................................................................... 26 1 1 1.00 1 1 0 0 0
.............................................................................................................................TTTACATTTTCTGGGTTGAGTT.................. 22 0 1 1.00 1 1 0 0 0
..................................AGGGATGGCCTCAAAAGCAAGGTCCA......................................................................................................... 26 1 1 1.00 1 1 0 0 0
.....................................................................GAGGCCTTTCACGAAAGCAGCCAC........................................................................ 24 1 1 1.00 1 1 0 0 0
....................................GGATAGCCTCAAAAGGAAGGTCCA......................................................................................................... 24 1 1 1.00 1 1 0 0 0
.......................................................................GGCCTTTCGCGAAAGCAGCCACCTGT.................................................................... 26 0 1 1.00 1 1 0 0 0
......................................................................AGGCCTTTCGCGAAAGCAGCCACCTGT.................................................................... 27 0 1 1.00 1 1 0 0 0
............................................................................TTCGCGAAAGCAGCCACCTGTACCC................................................................ 25 1 1 1.00 1 1 0 0 0
..........................................................................CTTTCGCGAAAGCAGCCACCTGTACGCC............................................................... 28 0 1 1.00 1 1 0 0 0
..................................AGGGATAGCCTCAAAAGCGAGGTCCA......................................................................................................... 26 1 1 1.00 1 0 1 0 0
..........................................................................................................................ATCTTTACATTTTCTGGGTTGAGT................... 24 1 1 1.00 1 1 0 0 0
..............................................................CTAAGAGGAGGCCTTTCGCGAAAGCAG............................................................................ 27 0 1 1.00 1 1 0 0 0
........................................................................................................................................TGGGTTGAGTTTGCTAAACTGAG...... 23 0 1 1.00 1 1 0 0 0
..................................................................................................................CACGCTTCCTCTTTACATTTTCTGGGTT....................... 28 0 1 1.00 1 1 0 0 0
...................................................................................................GCCTAGACGCCCACTCACGCT............................................. 21 0 1 1.00 1 1 0 0 0
............................................................................................................................CTTTACATTTTCTGGGTTGAGT................... 22 0 1 1.00 1 1 0 0 0
..............................................................................CGCGAAAGCAGCCACCTGTACG................................................................. 22 0 2 1.00 2 2 0 0 0
.......CACTCAAAAAAAACACGAAATACGGT.................................................................................................................................... 26 0 1 1.00 1 1 0 0 0
............................................................................TTCGCGAAAGCAGCCACCTGTA................................................................... 22 0 1 1.00 1 1 0 0 0
..............................................................CTAAGAGGAGGCCTTTCGCGAAA................................................................................ 23 0 1 1.00 1 1 0 0 0
...................................GGGATAGCCTCAAAAGCAAGGTC........................................................................................................... 23 0 1 1.00 1 1 0 0 0
.................................................AGCAAGGTCCAGGCTAAGAGGAGGC........................................................................................... 25 0 1 1.00 1 0 1 0 0
.............................................................................TCGCGAAAGCAGCCACCTGTACGCC............................................................... 25 0 1 1.00 1 1 0 0 0
.....................................GATAGCCTCAAAAGCAAGGTCCA......................................................................................................... 23 0 1 1.00 1 1 0 0 0
.................................AAGGGATAGCCTCAAAAGCAAGGT............................................................................................................ 24 1 1 1.00 1 0 0 0 1
.....................................GATAGCCTCAAAAGCAAGGTCCAGG....................................................................................................... 25 0 1 1.00 1 1 0 0 0
.....................................GAGAGCCTCAAAAGCAAGGTCCAGGC...................................................................................................... 26 1 1 1.00 1 1 0 0 0
....................................................................................................................................TTTCTGGGTTGAGTTTGCTAAACT......... 24 0 1 1.00 1 1 0 0 0
.............................................CAAAAGCAAGGTCCAGGCTAAGAGGA.............................................................................................. 26 0 1 1.00 1 1 0 0 0
...................................................................................................GCCTAGACGCCCACTCACGCTTC........................................... 23 0 1 1.00 1 1 0 0 0
.............................................................................TCGCGAAAGCAGCCACCTGTAC.................................................................. 22 0 2 1.00 2 2 0 0 0
.................................................AGCAAGGTCCAGGCTAAGAGGAGGCCT......................................................................................... 27 0 1 1.00 1 1 0 0 0
............................................................................TTCGCGAAAGCAGCCTCCTGTACG................................................................. 24 1 1 1.00 1 1 0 0 0
...................................GGGATAGCCTCAAAAGCAAGGTCCAGGC...................................................................................................... 28 0 1 1.00 1 1 0 0 0
..........................................................................TTTTCGCGAAAGCAGCCACCTGTACGC................................................................ 27 1 1 1.00 1 1 0 0 0
..................................................................................................CGCCTAGACGCCCACTCACGCTTCCT......................................... 26 0 1 1.00 1 1 0 0 0
...........................................CTCAAAAGCAAGGTCCAGGCTAAGAGG............................................................................................... 27 0 1 1.00 1 0 1 0 0
.....................................................................................GCAGCCACCTGTACGCCTAGACGCC....................................................... 25 0 1 1.00 1 1 0 0 0
.......................................................GTCCAGGCTAAGAGGAGGCCT......................................................................................... 21 0 1 1.00 1 1 0 0 0
...........................................AACACAAGCAAGGTCCAGGCTAAGAGG............................................................................................... 27 3 1 1.00 1 0 1 0 0
..................................................................................AAAGCAGCCACCTGTACGCCTAG............................................................ 23 0 1 1.00 1 1 0 0 0
...............................................................................................GTACGCCTAGACGCCCACTCACGCTT............................................ 26 0 1 1.00 1 1 0 0 0
............................................................................TTAGCGAAAGCAGCCCCCTGTACG................................................................. 24 2 1 1.00 1 1 0 0 0
...............................................................TAAGAGGAGGCCTTTCGCGAAAG............................................................................... 23 0 1 1.00 1 1 0 0 0
...................................GAGATAGCCTCAAAAGCAAGGTCCA......................................................................................................... 25 1 1 1.00 1 1 0 0 0
............................................................AGCTAAGAGGAGGCCTTTCGCGAAA................................................................................ 25 1 1 1.00 1 1 0 0 0
............................................................................TTCGCGAAAGCAGCCAACTGTACG................................................................. 24 1 1 1.00 1 1 0 0 0
............................................................................TTCGCGAAAACAGCCACCTGTACG................................................................. 24 1 1 1.00 1 1 0 0 0
..................................AGGGTTAGCCTCAAAAGCAAGGTCCA......................................................................................................... 26 1 1 1.00 1 1 0 0 0
.......................................TAGCCTCAAAAGCAAGGTCCAGG....................................................................................................... 23 0 1 1.00 1 1 0 0 0
.......................................TAGCCTCAAAAGCAAGGTCCA......................................................................................................... 21 0 1 1.00 1 1 0 0 0
............................................................................TTCGCGAAAGCAGCCACCTGTACGA................................................................ 25 1 1 1.00 1 1 0 0 0
..................................AGGGATAGCCTCAAAAGCAAGGTCCAG........................................................................................................ 27 0 1 1.00 1 1 0 0 0
....................................................................GGAGGCCTTTCGCGAAAGCAGCCAC........................................................................ 25 0 1 1.00 1 1 0 0 0
........................................AGCCTCAAAAGCAAGGTCCAGG....................................................................................................... 22 0 1 1.00 1 1 0 0 0
..........................................................................CTTTCGCGAAAGCAGCCAGCTGTACGC................................................................ 27 1 1 1.00 1 1 0 0 0
.......................GAAATACGGTGAGTGATAGCCT........................................................................................................................ 22 1 1 1.00 1 1 0 0 0
.............................................................................TCGCGAAAGCAGCCGCCTGTACG................................................................. 23 1 2 0.50 1 1 0 0 0
.................................................................................GAAAGCAGCCACCTGTACGC................................................................ 20 0 2 0.50 1 1 0 0 0
........................................................................................CACACCTGTACGCCTAGACGCCCACT................................................... 26 2 2 0.50 1 1 0 0 0
...............................................................................GCGAAAGCAGCCACCTGTACG................................................................. 21 0 2 0.50 1 1 0 0 0
.............................................................................GCGCGAAAGCAGCCACCTGTACGC................................................................ 24 1 2 0.50 1 1 0 0 0
..................................AGGGATAGCCTCAAAAGAAAGGTCCA......................................................................................................... 26 1 2 0.50 1 1 0 0 0
....................................GGATAGCCTCAAAAGAAAGGTCCA......................................................................................................... 24 1 2 0.50 1 1 0 0 0
.............................................................................TCGCGAAAGCAGCCAACTGTACGC................................................................ 24 1 2 0.50 1 1 0 0 0
..............................................................................CGCGAAAGCAGCCACCTGCACGC................................................................ 23 1 2 0.50 1 1 0 0 0
.............................................................................................CTGTACGCCTAGACGCCCACTC.................................................. 22 0 2 0.50 1 1 0 0 0
...............................................................................GCGAAGGCAGCCACCTGTACGC................................................................ 22 1 2 0.50 1 1 0 0 0
............................................................................GTCGCGAAAGCAGCCACCTGTACG................................................................. 24 1 2 0.50 1 1 0 0 0
.................................GAGGGATAGCCTCAATAGCAAGGT............................................................................................................ 24 1 2 0.50 1 1 0 0 0
..................................................AAAAGGTCCAGGCTAAGAGG............................................................................................... 20 2 6 0.17 1 1 0 0 0
.........................................................................GCTTTCGCGAAAGCAGCACC........................................................................ 20 3 20 0.05 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_186:44578-44742 - dpe_269 TTTGTG----AGTGAG-TTTTTT-------TTGTG---CTTT-ATGCCACTCCCTATCGGAGTTTTCGTTCCAGGTCCGATTCTCCTCCGGAAAGCGCTTTCGTCGGTGGACATGCGGATCTGCG-GGTGAGTGCGAAGGAGAAATGTAAAAGACCCAACTCAAACGATTTGACTC--GAGTCC
dp5 Unknown_group_637:7820-7982 + TTTGTG----AGTGAGGTTTTTT-------TTGTGTGCCTTT-GTTTTACTCCCGATTGGAGTTCACTTTACAGGTCCAAATCTCCTCCGGGAAGCGCTT-CATCGGTGGATATGCGGATCATCG-GGTGAGTGAGAACGAACA----AGAAAATTTAACCCTGGCAATTCCACTCATGAG---
droKik1 scf7180000301271:716-763 + TCTAC---------------------------------------------------------------------------------GCGGGAAAGCGCTTTCTTCGCTGGAGTTACGAAA----G-GGTGAGTG--------------------------------------------------
droFic1 scf7180000451991:823-949 - GTTATTGTTATGTGATATTTTCTTCCCCCTTGAAGTGACTTTTTTTTTAGTCCCTCGTAG----------------CCGCCAATCCTCGGGAAAGCGCTTTCTCCGATGGAATGCCAAATAAGTGCGGTGAGTGAAAAAAAGA-----------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
TTTGTG----AGTGAG-TTTTTT-------TTGTG---CTTT-ATGCCACTCCCTATCGGAGTTTTCGTTCCAGGTCCGATTCTCCTCCGGAAAGCGCTTTCGTCGGTGGACATGCGGATCTGCG-GGTGAGTGCGAAGGAGAAATGTAAAAGACCCAACTCAAACGATTTGACTC--GAGTCCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................................................................TGGACATGCGGATCTGCG-GGTGA.....................................................2326.50130111001
..........................................................................................................GTGGACATGCGGATCTGCG-GG........................................................2123.507070000
..........................................................................................................GTGGACATGCGGATCTGCG-GGTG......................................................2322.505050000
..........................................................................................................GTGGACATGCGGATCTGCG-G.........................................................2022.505050000
...........................................................................................................TGGACATGCGGATCTGCG-GGT.......................................................2122.004040000
..................................................................CGTTCCAGGTCCGATTCTCCTCC...............................................................................................2312.002020000
...........................................................................................................TGGACATGCGGATCTGCG-GGTGAG....................................................2422.004040000
...........................................................................................................TGGACATGCGGATCTGCG-GG........................................................2021.503030000
..........................................................................................................GTGGACATGCGGATCTGCG-GGT.......................................................2221.503030000
...........................................................................................................TGGACATGCGGATCTGCG-GGTG......................................................2221.503030000
......................................................................................TCCGGAAAGCGCTTTCGTCGGTGGACA.......................................................................2711.001010000
.........................................................................................................................................................ACCCAACTCAAACGATTTG............1911.001010000
..................................................................CGTTCCAGGTCCGATTCTCCTCCG..............................................................................................2411.001010000
.................................TG---CTTT-ATGCCACTCCCTATCGG............................................................................................................................2311.001010000
...................................................................................................................................................TAAAAGACCCAACTCAAACGA................2111.001010000
.................................TG---CTTT-ATGCCACTCCCTATCG.............................................................................................................................2211.001010000
...............................................................................................................................................................CTCAAACGATTTGACTC--GAGTC.2211.001010000
.......................................................................CAGGTCCGATTCTCCTCCGGA............................................................................................2111.001010000
.........................................................................................................................................................ACCCAACTCAAACGATTTGACTC--GAG...2611.001010000
..................................................................CGTTCCAGGTCCGATTCTCCTC................................................................................................2211.001010000
............................................................................................................GGACATGCGGATCTGCG-GGTGAG....................................................2321.002020000
...........................................................................................AAAGCGCTTTCGTCGGTGGACATG.....................................................................2411.001010000
..................................................................CGTTCCAGGTCCGATTCTCCTCCGGA............................................................................................2611.001010000
.........................................................................................................................TGCG-GGTGAGTGCGAAGGAGAA........................................2211.001010000
..........................................................................................................GTGGACATGCGGATCTGCG-..........................................................1921.002020000
...........................................................................................................TGGACATGCGGATCTGCG-GGTGAGT...................................................2520.501010000
...........................................................................................................TGGACATGCGGATCTGCG-..........................................................1820.501010000
............................................................................................................GGACATGCGGATCTGCG-GG........................................................1920.501010000
..............................................................................................................ACATGCGGATCTGCG-GGT.......................................................1820.501010000
dp5
TTTGTG----AGTGAGGTTTTTT-------TTGTGTGCCTTT-GTTTTACTCCCGATTGGAGTTCACTTTACAGGTCCAAATCTCCTCCGGGAAGCGCTT-CATCGGTGGATATGCGGATCATCG-GGTGAGTGAGAACGAACA----AGAAAATTTAACCCTGGCAATTCCACTCATGAG---SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................TACAGGTCCAAATCTCCTCCGG.............................................................................................221215.42185017730100400
.....................................................................TACAGGTCCAAATCTCCTCCGGGA...........................................................................................241215.17182017730200000
.....................................................................TACAGGTCCAAATCTCCTCCGGG............................................................................................231212.33148014230000300
.....................................................................TACAGGTCCAAATCTCCTCCG..............................................................................................21123.834604300001200
..................................................................................................................GCGGATCATCG-GGTGAGTGAGAAC.............................................24113.5539023000121300
..................................................................................................................GCGGATCATCG-GGTGAGTGAGA...............................................22113.453803100011500
.....................................................................TACAGGTCCAAATCTCCTCCGGGAAG.........................................................................................26123.003603200202000
..................................................................................................................GCGGATCATCG-GGTGAGTGAGAA..............................................23112.552802000001700
.........................................................................................................................................ACGAACA----AGAAAATTTAACCCTGG...................2452.401202000001000
.....................................................................TACAGGTCCAAATCTCCTCCGGGAA..........................................................................................25122.172602600000000
..................................................................................................................GCGGATCATCG-GGTGAGTGAG................................................21121.832201400100700
.....................................................................TACAGGTCCAAATCTCCTCC...............................................................................................20121.672001720000100
....................................................................................................................................TGAGAACGAACA----AGAAAATTTAACCC......................2651.6080420000200
......................................................................ACAGGTCCAAATCTCCTCCGG.............................................................................................21121.331601600000000
...................................................................................................................................GTGAGAACGAACA----AGAAAATTTAACCC......................2751.2060600000000
...................................................................................................T-CATCGGTGGATATGCGGATCATCG-..........................................................2581.1390900000000
......................................................................ACAGGTCCAAATCTCCTCCGGG............................................................................................22121.081301300000000
......................................................................ACAGGTCCAAATCTCCTCCGGGA...........................................................................................23121.081301300000000
.........................................................................................................................................ACGAACA----AGAAAATTTAACCCTGGC..................2551.0050200000300
.....................................................................TACAGGTCCAAATCTCCTCCGGGAAGC........................................................................................27121.001201110000000
.................................TGTGCCTTT-GTTTTACTCCCGATT..............................................................................................................................2441.0040100000300
...................................................................................................T-CATCGGTGGATATGCGGATCATCG-GG........................................................2780.8870600000100
..................TTTTT-------TTGTGTGCCTTT-GTTTTACTCC...................................................................................................................................2730.6720000000200
.....................................................................TACAGGTCCAAATCTCCTCCGGGAAGCGC......................................................................................29120.6780300005000
.......................................................................................................TCGGTGGATATGCGGATCATCG-GG........................................................24110.6470700000000
..................................................................................................TT-CATCGGTGGATATGCGGATCATCG-..........................................................2680.6350500000000
...........................................................................................................................................GAACA----AGAAAATTTAACCCTGGCAA................2550.6030300000000
...........................................................................................................................................GAACA----AGAAAATTTAACCCTGGCAAT...............2650.6030300000000
..........................................................................................................................................CGAACA----AGAAAATTTAACCCTGG...................2350.6030000000300
..........................................................................................................................................CGAACA----AGAAAATTTAACCCTGGC..................2450.6030300000000
.......................................................................................................................................GAACGAACA----AGAAAATTTAACCCTG....................2550.6030000000300
....................................................................................................................................TGAGAACGAACA----AGAAAATTTAACC.......................2550.6030000000300
.................................................................................................................................GAGTGAGAACGAACA----AGAAAATT............................2350.6030300000000
...........................................................................................................................................GAACA----AGAAAATTTAACCCTGGC..................2350.6030300000000
.....................................................................TACAGGTCCAAATCTCCTCCGT.............................................................................................22120.5060500100000
..................................................................................................TT-CATCGGTGGATATGCGGATCAT.............................................................2480.5040200001010
...................................................................................................T-CATCGGTGGATATGCGGATCAT.............................................................2380.5040400000000
......................................................................ACAGGTCCAAATCTCCTCCGGGAA..........................................................................................24120.5060600000000
...............................TGTGTGCCTTT-GTTTTACTCCCGATT..............................................................................................................................2640.5020200000000
...................................................................................................................CGGATCATCG-GGTGAGTGAGA...............................................21110.4550500000000
......................................................................ACAGGTCCAAATCTCCTCCGGGAAG.........................................................................................25120.4250401000000
.....................................................................TACAGGTCCAAATCTCCTCCGGGT...........................................................................................24120.4250400100000
.........................................................................................................................................ACGAACA----AGAAAATTTAACCCT.....................2250.4020200000000
......................................................................................................................................AGAACGAACA----AGAAAATTTAACCC......................2450.4020100000100
...........................................................................................................................................GAACA----AGAAAATTTAACCCTGGCA.................2450.4020200000000
.........................................................................................................................................ACGAACA----AGAAAATTTAACCCTG....................2350.4020000000200
................................................................................................................................TGAGTGAGAACGAACA----AGAAAATT............................2450.4020200000000
................................................................................................................................TGAGTGAGAACGAACA----AGAAAAT.............................2350.4020000000200
...................................................................................................................................GTGAGAACGAACA----AGAAAATTTAA.........................2450.4020200000000
.....................................................................................................CATCGGTGGATATGCGGATCATC............................................................2380.3830300000000
..................................................................................................................GCGGATCATCG-GGTGAGTGAGAACGA...........................................2680.3830200000100
.......................................................................................................TCGGTGGATATGCGGATCATCG-GGT.......................................................25110.3640300000100
..................................................................................................................GCGGATCATCG-GGTGAGTGA.................................................20120.3340400000000
...................TTTT-------TTGTGTGCCTTT-GTTTTACT.....................................................................................................................................2430.3310100000000
......................................................................ACAGGTCCAAATCTCCTCCGGGAAGC........................................................................................26120.3340400000000
.....................TT-------TTGTGTGCCTTT-GTTTTACTC....................................................................................................................................2330.3310100000000
...........................................................................................................TGGATATGCGGATCATCG-GGTGAGTGA.................................................27110.2730000000300
..................................................................................................................GCGGATCATCG-GGTGAGTGAGAAT.............................................24110.2730000000300
.................................................................................................................TGCGGATCATCG-GGTGAGTGAGAA..............................................24110.2730100001100
.......................................................................CAGGTCCAAATCTCCTCCGGGA...........................................................................................22120.2530300000000
...............................TGTGTGCCTTT-GTTTTACTCCCG.................................................................................................................................2340.2510100000000
...................................................................................................................CGGATCATCG-GGTGAGTGAGAACGA...........................................2580.2520200000000
.....................................................................................................CATCGGTGGATATGCGGATCATCG-GG........................................................2680.2520200000000
..................................................................................................................GCGGATCATCG-GGTGAGTG..................................................19120.2530300000000
..................................................................................................................GCGGATCATCG-GGTGAGTGAGAACG............................................2580.2520000001100
...............................TGTGTGCCTTT-GTTTTACTCCCGATTG.............................................................................................................................2740.2510100000000
...................................TGCCTTT-GTTTTACTCCCGATTG.............................................................................................................................2340.2510100000000
...................................................................................................T-CATCGGTGGATATGCGGATCATC............................................................2480.2520200000000
..................................................................................................TT-CATCGGTGGATATGCGGATCATC............................................................2580.2520200000000
.....................................................................TACAGGTCCAAATCTCCTCCGGT............................................................................................23120.2530300000000
....................................GCCTTT-GTTTTACTCCCGATTGG............................................................................................................................2340.2510100000000
..................................................................................................TT-CATCGGTGGATATGCGGAT................................................................2180.2520200000000
......................................................................ACAGGTCCAAATCTCCTCCG..............................................................................................20120.2530300000000
..................................................................................................TT-CATCGGTGGATATGCGGATCA..............................................................2380.2520200000000
.............................................................................................................................................ACA----AGAAAATTTAACCCTGGCAATT..............2580.2520000000200
..............................................................................................................................................CA----AGAAAATTTAACCCTGGCAATT..............2480.2520000000200
..........................................................................................................................................CGAACA----AGAAAATTTAACCCTGGCAAT...............2750.2010100000000
...........................................................................................................................................GAACA----AGAAAATTTAACCCTGG...................2250.2010100000000
...................................................................................................................................GTGAGAACGAACA----AGAAAATTTAAC........................2550.2010010000000
..........................................................................................................................................CGAACA----AGAAAATTTAACCCTGGCAA................2650.2010010000000
..........................................................................................................................................CGAACA----AGAAAATTTAACCCTGGCA.................2550.2010100000000
.........................................................................................................................................ACGAACA----AGAAAATTTAACCCTGGCAA................2750.2010100000000
..................................................................................................................................AGTGAGAACGAACA----AGAAAATTTAACCC......................2850.2010010000000
....................................................................................................................................TGAGAACGAACA----AGAAAATTTAACAA......................2650.2010100000000
..........................................................................................................................................CGAACA----AGAAAATTTAACCCT.....................2150.2010100000000
............................................................................................................................G-GGTGAGTGAGAACGAACA----AGAAAAT.............................2650.2010100000000
...................................................................................................................................GTGAGAACGAACA----AGAAAATTTAACT.......................2650.2010100000000
......................................................................................................................................AGAACGAACA----AGAAAATTTAACCCTGG...................2750.2010100000000
.........................................................................................................................................ACGAACA----AGAAAATTTAACCCTGGA..................2550.2010100000000
.......................................................................................................................TCATCG-GGTGAGTGAGAACGAACA----T...................................2550.2010100000000
........................................................................................................................CATCG-GGTGAGTGAGAACGAACA----....................................2350.2010100000000
..........................................................................................................................TCG-GGTGAGTGAGAACGAACA----AGAAA...............................2650.2010100000000
...................................................................................................................CGGATCATCG-GGTGAGTGAGAAC.............................................23110.1820200000000
.............................................................................................................GATATGCGGATCATCG-GGTGAGT...................................................23110.1820100001000
.......................................................................................................TCGGTGGATATGCGGATCATCG-GT........................................................24110.1820110000000
...........................................................................................................TGGATATGCGGATCATCG-GGTGA.....................................................23110.1820200000000
...................................................................................................................CGGATCATCG-GGTGAGTGAGAA..............................................22110.1820200000000
................................................................................................................ATGCGGATCATCG-GGTGAGT...................................................20110.1820100000100
.....................................................................TACAGGTCCAAATCTCCTCCGGGAAGCG.......................................................................................28120.1720000000200
......................................................................ACAGGTCCAAATCTCCTCCGGGAAGCGC......................................................................................28120.1720100001000
.....................................................................TACAGGTCCAAATCTCCTCCGC.............................................................................................22120.1720200000000
.......................................................................CAGGTCCAAATCTCCTCCGGG............................................................................................21120.1720200000000
..................................................................................................................GCGGATCATCG-GGTGAGTGAA................................................21120.1720100001000
.....................................................................TACAGGTCCAAATCTCCTCCGGGG...........................................................................................24120.1720200000000
.....................................................................TACAGGTCCAAATCTCCTCCGGA............................................................................................23120.1720200000000
.......................................TTT-GTTTTACTCCCGATTGG............................................................................................................................2070.1410000000100
.................................................................................................................TGCGGATCATCG-GGTGAGTGAGAACG............................................2680.1310000001000
..................................................................................................TT-CATCGGTGGATATGCGGATCATCG-GG........................................................2880.1310100000000
...................................................................................................T-CATCGGTGGATATGCGGATC...............................................................2180.1310100000000
.....................................................................................................CATCGGTGGATATGCGGATCATCG-..........................................................2480.1310100000000
...................................................................................................T-CATCGGTGGATATGCGGATCATCG-G.........................................................2680.1310100000000
..................................................................................................TT-CATCGGTGGATATGCGGATCATCG-A.........................................................2780.1310100000000
...................................................................................................T-CATCGGTGGATATGCGGAT................................................................2080.1310100000000
.............................................................................................AGCGCTT-CATCGGTGGATATGCGGA.................................................................2580.1310000000100
.....................................................................................................................GATCATCG-GGTGAGTGAGAACG............................................2280.1310100000000
.................................................................................TCTCCTCCGGGAAGCGCTT-CATCGG.............................................................................2580.1310100000000
..............................................................................................GCGCTT-CATCGGTGGATAT......................................................................1980.1310100000000
............................................................................................AAGCGCTT-CATCGGTGGATATGCG...................................................................2480.1310000001000
..................................................................................................TT-CATCGGTGGATATGCGGATCAA.............................................................2480.1310100000000
.......................................................................................................................TCATCG-GGTGAGTGAGAACGA...........................................2180.1310100000000
.................................................................................................CTT-CATCGGTGGATATGCGGAT................................................................2280.1310100000000
..............................................................................................GCGCTT-CATCGGTGGATATGC....................................................................2180.1310000001000
...........................................................................................................................CG-GGTGAGTGAGAACGAA..........................................1880.1310100000000
.........................................................................................................................ATCG-GGTGAGTGAGAACG............................................1880.1310100000000
..................................................................................................TT-CATCGGTGGATATGCGGATCATCG-GT........................................................2880.1310100000000
..............................................................................................GCGCTT-CATCGGTGGATATG.....................................................................2080.1310100000000
.....................................................................................................CATCGGTGGATATGCGGA.................................................................1880.1310100000000
......................................................................................................................................................AAAATTTAACCCTGGCAATTCCACT.........2580.1310010000000
..................................................................................................TT-CATCGGTGGATATGCGGATC...............................................................2280.1310100000000
...................................................................................................T-CATCGGTGGATATGCGGAA................................................................2080.1310100000000
..................................................................................................TT-CATCGGTGGATATGCGGATCATCG-G.........................................................2780.1310100000000
............................................................................................................................................AACA----AGAAAATTTAACCCTGGCA.................2380.1310100000000
.....................................................................................................CATCGGTGGATATGCGGATCA..............................................................2180.1310100000000
............................................................................................................................................AACA----AGAAAATTTAACCCTGGCAA................2480.1310100000000
.............................................................................................AGCGCTT-CATCGGTGGATATGCGG..................................................................2480.1310100000000
.............................................................................................AGCGCTT-CATCGGTGGATATGCG...................................................................2380.1310000001000
TTTGTG----AGTGAGGTTTTTT-------T.........................................................................................................................................................2090.1110100000000
................................................................................................................ATGCGGATCATCG-GGTGAGTGAGA...............................................24100.1010100000000
....................................................................................................................GGATCATCG-GGTGAGTGAGAA..............................................21110.0910100000000
...........................................................................................................TGGATATGCGGATCATCG-GGTGAGTG..................................................26110.0910100000000
........................................................................................................CGGTGGATATGCGGATCATCG-GGTGAG....................................................27110.0910000001000
.............................................................................................................GATATGCGGATCATCG-GG........................................................18110.0910100000000
.......................................................................................................TCGGTGGATATGCGGATCATCG-..........................................................22110.0910100000000
..........................................................................................................GTGGATATGCGGATCATCG-GGT.......................................................22110.0910000001000
.......................................................................................................TCGGTGGATATGCGGATCATCG-G.........................................................23110.0910100000000
...............................................................................................................TATGCGGATCATCG-GGTGAGTGAG................................................24110.0910000100000
........................................................................................................CGGTGGATATGCGGATCATCG-GG........................................................23110.0910100000000
.................................................................................................................TGCGGATCATCG-GGTGAGTGAGAAAA............................................26110.0910100000000
...........................................................................................................TGGATATGCGGATCATCG-GGTGAGT...................................................25110.0910100000000
................................................................................................................ATGCGGATCATCG-GGTGA.....................................................18110.0910100000000
.......................................................................................................TCGGTGGATATGCGGATCATCG-GTA.......................................................25110.0910100000000
........................................................................................................CGGTGGATATGCGGATCATCG-GTA.......................................................24110.0910100000000
.............................................................................................................GATATGCGGATCATCG-GGTGAGAC..................................................24110.0910100000000
..................................................................................................................GCGGATCATCG-GGTGAGTGAGAAAA............................................25110.0910100000000
.....................................................................TACAGGTCCAAATCTCCTCCGGGTT..........................................................................................25120.0810100000000
..................................................................CTTTACAGGTCCAAATCTCCTCCGG.............................................................................................25120.0810100000000
.....................................................................TACAGGTCCAAATCTCCTCCGGGTTT.........................................................................................26120.0810100000000
.....................................................................TACAGGTCCAAATCTCCTCCGA.............................................................................................22120.0810100000000
......................................................................ACAGGTCCAAATCTCCTCCGGGAAGCG.......................................................................................27120.0810100000000
...........................................................................TCCAAATCTCCTCCGGGAAGCG.......................................................................................22120.0810100000000
......................................................................ACAGGTCCAAATCTCCTCC...............................................................................................19120.0810100000000
...............................................................TCACTTTACAGGTCCAAATCTCCTC................................................................................................25120.0810100000000
............................................................................CCAAATCTCCTCCGGGAAGC........................................................................................20120.0810100000000
.....................................................................TACAGGTCCAAATCTCCTCCGGGAAA.........................................................................................26120.0810100000000
.....................................................................TACAGGTCCAAATCTCCTCCGGGC...........................................................................................24120.0810100000000
......................................................................ACAGGTCCAAATCTCCTCCGGGAAGA........................................................................................26120.0810100000000
....................................................................TTACAGGTCCAAATCTCCTCCGGGA...........................................................................................25120.0810100000000
.....................................................................TACAGGTCCAAATCTCCTCCGGGAC..........................................................................................25120.0810100000000
.................................................................................................................TGCGGATCATCG-GGTGAGT...................................................19120.0810100000000
.......................................................................CAGGTCCAAATCTCCTCCGGGC...........................................................................................22120.0810100000000
......................................................................ACAGGTCCAAATCTCCTCCGGT............................................................................................22120.0810100000000
.....................................................................TACAGGTCCAAATCTCCTCCGGGAAAA........................................................................................27120.0810100000000
..............................................................TTCACTTTACAGGTCCAAATCTCCTCCGG.............................................................................................29120.0810100000000
....................................................................TTACAGGTCCAAATCTCCTCC...............................................................................................21120.0810100000000
.......................................................................CAGGTCCAAATCTCCTCCGGGAAA.........................................................................................24120.0810100000000
...........................................................................TCCAAATCTCCTCCGGGAAGC........................................................................................21120.0810100000000
......................................................................ACAGGTCCAAATCTCCTCCGGGAAA.........................................................................................25120.0810010000000
..........................................................................GTCCAAATCTCCTCCGGG............................................................................................18120.0810100000000
.........................................................................GGTCCAAATCTCCTCCGGGA...........................................................................................20120.0810100000000
.................................................................................................................TGCGGATCATCG-GGTGAGTGAG................................................22120.0810100000000
......................................................................ACAGGTCCAAATCTCCTCCGGGAAC.........................................................................................25120.0810010000000
droKik1
TCTAC---------------------------------------------------------------------------------GCGGGAAAGCGCTTTCTTCGCTGGAGTTACGAAA----G-GGTGAGTG--------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
GTTATTGTTATGTGATATTTTCTTCCCCCTTGAAGTGACTTTTTTTTTAGTCCCTCGTAG----------------CCGCCAATCCTCGGGAAAGCGCTTTCTCCGATGGAATGCCAAATAAGTGCGGTGAGTGAAAAAAAGA-----------------------------------------SizeHit CountTotal NormTotal
No Reads

Generated: 05/15/2015 at 03:04 PM