ID:

dpe_24

 Coordinate:

scaffold_0:5531627-5531687 -

 Confidence:

Known Ortholog

 Class:

Canonical miRNA

 Genomic Locale:

intergenic

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-36.3 -36.0 -35.9

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

ATTGGAATCGTGTGTGCATTTGGAAAACCAAACCGTCTGCGTGTGCTTCTTTTGTTACTGATGGTGCTGTCGGTCCATATTCGTTAAGCCAGCGTCATCAGTGGCAACAGCCGCACCGCAACCCAACCCCCAGAAGAACGAGTATGGTATGGCATGCCCTG

***********************************..((((.((((..((.((((((((((((((((((....................)))))))))))))))))).))..)))))))).....************************************ 		Read size # Mismatch Hit Count Total Norm Total M021

embryo

 M042

female body

 V057

head

 V050

head

 V042

embryo

 V111

male body
..................................................TTTGTTACTGATGGTGCTGTC.......................................................................................... 21 0 1 6180.00 6180 5350 590 106 104 21 9
..................................................TTTGTTACTGATGGTGCTG............................................................................................ 19 0 1 2745.00 2745 805 1892 34 8 0 6
..................................................TTTGTTACTGATGGTGCTGT........................................................................................... 20 0 1 764.00 764 68 595 68 25 1 7
.........................................................................................CAGCGTCATCAGTGGCAACAG................................................... 21 0 1 140.00 140 4 3 78 45 9 1
...................................................TTGTTACTGATGGTGCTG............................................................................................ 18 0 1 130.00 130 2 128 0 0 0 0
..................................................TTTGTTACTGATGGTGCT............................................................................................. 18 0 1 129.00 129 76 51 1 1 0 0
..................................................TTTGTTACTGATGGTGCTGA........................................................................................... 20 1 1 89.00 89 1 78 9 0 0 1
..................................................TTTGTTACTGATGGTGCTT............................................................................................ 19 1 1 79.00 79 1 75 2 1 0 0
...................................................TTGTTACTGATGGTGCTGTC.......................................................................................... 20 0 1 56.00 56 6 49 1 0 0 0
...................................................TTGTTACTGATGGTGCTGT........................................................................................... 19 0 1 42.00 42 0 42 0 0 0 0
........................................................................................CCAGCGTCATCAGTGGCAACAG................................................... 22 0 1 39.00 39 0 0 23 13 0 3
..................................................TTTGTTACTGATGGTGCTGAC.......................................................................................... 21 1 1 36.00 36 35 0 1 0 0 0
..................................................TTTGTTACTGATGGTGCTGC........................................................................................... 20 1 1 34.00 34 8 23 3 0 0 0
..................................................TTTGTTACTGATGGTGCTGTT.......................................................................................... 21 1 1 32.00 32 3 20 4 5 0 0
..................................................TTTGTTACTGATGTTGCTGTC.......................................................................................... 21 1 1 29.00 29 25 1 1 0 0 2
..................................................TTTGTTACTGATGGTGCTGTCG......................................................................................... 22 0 1 28.00 28 0 6 13 7 1 1
..................................................TTTGTTACGGATGGTGCTGTC.......................................................................................... 21 1 1 26.00 26 0 25 1 0 0 0
..................................................TTTGTTACTGATGGGGCTGTC.......................................................................................... 21 1 1 25.00 25 24 1 0 0 0 0
..................................................TTTGTTACGGATGGTGCTGT........................................................................................... 20 1 1 25.00 25 0 25 0 0 0 0
..................................................TTTGTTACTGATGGTTCTGTC.......................................................................................... 21 1 1 23.00 23 21 0 1 1 0 0
.....................................................TTTACTGATGGTGCTGTC.......................................................................................... 18 1 1 21.00 21 20 1 0 0 0 0
...................................................TTTTTACTGATGGTGCTGTC.......................................................................................... 20 1 1 19.00 19 19 0 0 0 0 0
........................................................................................CCAGCGTCATCAGTGGCAACA.................................................... 21 0 1 19.00 19 0 0 9 9 1 0
..................................................TTTTTTACTGATGGTGCTGTC.......................................................................................... 21 1 1 18.00 18 15 3 0 0 0 0
.........................................................................................CAGCGTCATCAGTGGCAACA.................................................... 20 0 1 18.00 18 0 0 12 4 2 0
..................................................TTTGTTACTGATTGTGCTGTC.......................................................................................... 21 1 1 17.00 17 16 0 1 0 0 0
..................................................TTTGTTACTGATAGTGCTGTC.......................................................................................... 21 1 1 15.00 15 15 0 0 0 0 0
..................................................TTTGTTACTGATGGTGCTGG........................................................................................... 20 1 1 15.00 15 13 2 0 0 0 0
..................................................TTTGTTACTGATGGTGCTGCC.......................................................................................... 21 1 1 15.00 15 15 0 0 0 0 0
..................................................TTTGTTACTGATGGTGCTGGC.......................................................................................... 21 1 1 13.00 13 13 0 0 0 0 0
..................................................TTTGTTACTGATGGTGCTTT........................................................................................... 20 1 1 12.00 12 0 11 1 0 0 0
.......................................................................GGTCCATATTCGTTAAGC........................................................................ 18 0 1 12.00 12 8 1 1 1 1 0
....................................................TTTTACTGATGGTGCTGTC.......................................................................................... 19 1 1 11.00 11 11 0 0 0 0 0
..................................................TTTGTTACTGGTGGTGCTGTC.......................................................................................... 21 1 1 10.00 10 9 0 0 1 0 0
..................................................TTTGTTACTGATGGTCCTGTC.......................................................................................... 21 1 1 10.00 10 8 1 1 0 0 0
..................................................TTTCTTACTGATGGTGCTGTC.......................................................................................... 21 1 1 10.00 10 9 1 0 0 0 0
...................................................TTTTTACTGATGGTGCTG............................................................................................ 18 1 1 9.00 9 6 3 0 0 0 0
..................................................TTTGTTACAGATGGTGCTGTC.......................................................................................... 21 1 1 9.00 9 0 9 0 0 0 0
..................................................TTTGTTACTGATGGTGCGG............................................................................................ 19 1 2 8.00 16 15 1 0 0 0 0
..................................................TTTGTTACCGATGGTGCTGTC.......................................................................................... 21 1 1 8.00 8 4 3 0 1 0 0
..................................................TTTGTTACTGATGGCGCTGTC.......................................................................................... 21 1 1 7.00 7 5 1 1 0 0 0
..................................................TTTGTTACCGATGGTGCTGT........................................................................................... 20 1 1 7.00 7 0 7 0 0 0 0
..................................................TTTGTTACTGATGGTGCTGTCT......................................................................................... 22 1 1 7.00 7 3 0 1 3 0 0
..................................................TTTGTTACAGATGGTGCTGT........................................................................................... 20 1 1 7.00 7 0 7 0 0 0 0
..................................................TTTGTTACTGACTGTGCTGTC.......................................................................................... 21 2 1 6.00 6 6 0 0 0 0 0
..................................................TTTGTTACTGATGGTGCTA............................................................................................ 19 1 1 6.00 6 0 5 1 0 0 0
..................................................TTTGCTACTGATGGTGCTGTC.......................................................................................... 21 1 1 6.00 6 6 0 0 0 0 0
..................................................TTTGTTACTGATGGAGCTGTC.......................................................................................... 21 1 1 6.00 6 5 0 1 0 0 0
..................................................TTTGTTGCTGATGGTGCTGTC.......................................................................................... 21 1 1 5.00 5 4 0 0 1 0 0
...................................................TCTTTACTGATGGTGCTGTC.......................................................................................... 20 2 1 5.00 5 5 0 0 0 0 0
..................................................TTTGTTACTGATCGTGCTGTC.......................................................................................... 21 1 1 5.00 5 4 0 1 0 0 0
..................................................TTTGTTACTGATGGTGCCGTC.......................................................................................... 21 1 1 5.00 5 4 1 0 0 0 0
..................................................TTTGTTACTGATGGGGCTG............................................................................................ 19 1 1 5.00 5 4 1 0 0 0 0
.................................................CTTTGTTACTGATGGTGCTG............................................................................................ 20 1 1 5.00 5 1 4 0 0 0 0
..................................................TTTGTTACTTATGGTGCTGTC.......................................................................................... 21 1 1 5.00 5 5 0 0 0 0 0
..................................................TTTGTTACGGATGGTGCTGA........................................................................................... 20 2 1 4.00 4 0 4 0 0 0 0
..................................................CTTGTTACTGATGGTGCTGTC.......................................................................................... 21 1 1 4.00 4 4 0 0 0 0 0
..................................................TTTGTTACTAATGGTGCTGTC.......................................................................................... 21 1 1 4.00 4 4 0 0 0 0 0
..................................................TTTTTTACTGATGGTGCTG............................................................................................ 19 1 1 4.00 4 2 2 0 0 0 0
..................................................TTTGTTACTGATGGTACTGTC.......................................................................................... 21 1 1 4.00 4 4 0 0 0 0 0
..................................................TTTGTTACTGATGCTGCTGT........................................................................................... 20 1 1 4.00 4 0 0 3 0 0 1
.................................................TTTTGTTACTGATGGTGCTGTC.......................................................................................... 22 0 1 4.00 4 3 0 0 0 1 0
..................................................TTTGTTACTGATGTTGCTG............................................................................................ 19 1 2 3.50 7 0 1 2 3 0 1
....................................................TGTTACTGATGGTGCTGTC.......................................................................................... 19 0 1 3.00 3 1 2 0 0 0 0
..................................................TTTGTTACTGATGGTGCTGTCC......................................................................................... 22 1 1 3.00 3 1 2 0 0 0 0
.................................................ATTTGTTACTGATGGTGCTG............................................................................................ 20 1 1 3.00 3 0 3 0 0 0 0
..................................................TTTGTTACTGATGGCGCTGT........................................................................................... 20 1 1 3.00 3 1 1 0 1 0 0
.................................................TTTTGTTACTGATGGTGCTGT........................................................................................... 21 0 1 3.00 3 0 2 1 0 0 0
.................................................TTTTGTTACTGATGGTGCTG............................................................................................ 20 0 1 3.00 3 1 2 0 0 0 0
..................................................TTTGTTACTGATAGTGCTG............................................................................................ 19 1 1 3.00 3 3 0 0 0 0 0
..................................................TTTATTACTGATGGTGCTGTC.......................................................................................... 21 1 1 3.00 3 3 0 0 0 0 0
..................................................TTTGTTACTGATGGTGCTGAA.......................................................................................... 21 2 1 3.00 3 0 2 1 0 0 0
..................................................TTTGTTACTGACGGTGCTGTC.......................................................................................... 21 1 1 3.00 3 3 0 0 0 0 0
..................................................TTTGGTACTGATGGTGCTGTC.......................................................................................... 21 1 1 3.00 3 2 0 1 0 0 0
..................................................TTTGTTACTGATGGTGCTTTC.......................................................................................... 21 1 1 3.00 3 0 1 1 1 0 0
...................................................TTGTTACTGATGGTGCTGA........................................................................................... 19 1 1 3.00 3 0 3 0 0 0 0
..................................................TTTGTTACTCATGGTGCTG............................................................................................ 19 1 1 3.00 3 2 1 0 0 0 0
.........................................................................................CAGCGTCATCAGTGGCACCAG................................................... 21 1 1 3.00 3 0 0 2 1 0 0
..................................................GTTGTTACTGATGGTGCTG............................................................................................ 19 1 2 2.50 5 0 5 0 0 0 0
..................................................CTTGTTACTGATGGTGCTGA........................................................................................... 20 2 1 2.00 2 0 1 1 0 0 0
..................................................TTTGTTACTCATGGTGCTGTC.......................................................................................... 21 1 1 2.00 2 1 0 0 1 0 0
..................................................TTTGTTACTGATGGTGCTC............................................................................................ 19 1 1 2.00 2 1 1 0 0 0 0
.........................................................................................CAGCGTCATCAGTGGCAACAGA.................................................. 22 1 1 2.00 2 0 0 1 1 0 0
.................................................CTTTGTTACTGATGGTGCTGTC.......................................................................................... 22 1 1 2.00 2 1 0 1 0 0 0
..................................................TTTGATACTGATGGTGCTG............................................................................................ 19 1 1 2.00 2 1 1 0 0 0 0
..................................................TTTGTTACTGATGGGGCTTTC.......................................................................................... 21 2 1 2.00 2 0 0 1 0 1 0
..................................................TTTGTTACGGATGGTGCTGC........................................................................................... 20 2 1 2.00 2 0 2 0 0 0 0
..................................................TTTGATACTGATGGTGCTGTC.......................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0
..................................................TTTGTTACTGATGATGCTGT........................................................................................... 20 1 1 2.00 2 0 0 0 1 0 1
..................................................TTTGTTACTGATGCTGCTGTC.......................................................................................... 21 1 1 2.00 2 0 0 2 0 0 0
..................................................TTTGTTACTGATGGTGCTATC.......................................................................................... 21 1 1 2.00 2 1 0 1 0 0 0
..................................................TTTGTTACTGATCGTGCTG............................................................................................ 19 1 1 2.00 2 2 0 0 0 0 0
..................................................TTTGTTACTGATGGCGCTG............................................................................................ 19 1 1 2.00 2 1 1 0 0 0 0
......................................................................................AGCCAGCGTCATCAGTGGCAACA.................................................... 23 0 1 2.00 2 0 1 0 1 0 0
.........................................................................................CAGCGTCATCAGTGGCAAC..................................................... 19 0 1 2.00 2 0 0 2 0 0 0
..................................................TTTGCTACTGATGGTGCTG............................................................................................ 19 1 1 2.00 2 2 0 0 0 0 0
..................................................TTTCTTACTGATGGTGCTG............................................................................................ 19 1 1 2.00 2 1 1 0 0 0 0
....................................................TGTTACTGATGGTGCTGT........................................................................................... 18 0 1 2.00 2 0 2 0 0 0 0
..................................................TTTGTTACTGATGGTGCTGTA.......................................................................................... 21 1 1 2.00 2 0 0 0 1 1 0
.....................................................GTTACTGATGGTGCTGTC.......................................................................................... 18 0 1 2.00 2 0 2 0 0 0 0
...................................................TTGTTACTGATGGTGCTGTT.......................................................................................... 20 1 1 2.00 2 0 2 0 0 0 0
..................................................TTTGTTACTGATGGGGCT............................................................................................. 18 1 1 2.00 2 1 1 0 0 0 0
..................................................TTTATTACTGATGGTTCTGTC.......................................................................................... 21 2 1 2.00 2 2 0 0 0 0 0
.........................................................................................AAGCGTCATCAGTGGCAACAC................................................... 21 2 1 2.00 2 0 0 2 0 0 0
........................................................................................CCAGCGTCATCAGTGGCAAC..................................................... 20 0 1 2.00 2 0 0 1 1 0 0
.........................................................................................CAGCGTCATCAGTGGCAACCG................................................... 21 1 1 2.00 2 0 0 0 2 0 0
..................................................ATTGTTACTGATGGTGCTGTC.......................................................................................... 21 1 1 2.00 2 0 2 0 0 0 0
..................................................TTTGTTACTGATGGTTCTG............................................................................................ 19 1 1 2.00 2 0 1 0 1 0 0
..................................................TGTGTTACTGATGGTGCTG............................................................................................ 19 1 1 2.00 2 0 1 1 0 0 0
..................................................TTTGTTACTGATGGTGATG............................................................................................ 19 1 1 2.00 2 0 0 2 0 0 0
..................................................TTTGTTACTGAGGGTGCTGT........................................................................................... 20 1 1 2.00 2 0 0 2 0 0 0
..................................................GTTGTTACTGATGGTGCTGT........................................................................................... 20 1 1 2.00 2 0 2 0 0 0 0
..................................................TTTGTTACTGATTGTGCTG............................................................................................ 19 1 1 2.00 2 0 1 0 1 0 0
..................................................TTTGTTACTGATGTTGCTGT........................................................................................... 20 1 2 1.50 3 0 2 0 0 0 1
...................................................TTGTTACTGATGGTGCTT............................................................................................ 18 1 3 1.33 4 0 4 0 0 0 0
..................................................TTTGTTACTGATGCTGCTG............................................................................................ 19 1 4 1.25 5 0 2 2 1 0 0
..................................................TTTGTTACTGATGGAGCTG............................................................................................ 19 1 1 1.00 1 0 1 0 0 0 0
..................................................TTTGTTACTTATGGTGCT............................................................................................. 18 1 1 1.00 1 1 0 0 0 0 0
...................................................TTCTTACTGATGGTGCTGTC.......................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
......................................................................................AGCCAGCGTCATCAGTGGCAA...................................................... 21 0 1 1.00 1 0 0 1 0 0 0
................................................CCTTTGTTACTGATGGTGCTG............................................................................................ 21 1 1 1.00 1 0 1 0 0 0 0
..................................................TTTCTTACTGATGGTGCTGGC.......................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0
..................................................TTTGTTACTGATGGTGCCG............................................................................................ 19 1 1 1.00 1 1 0 0 0 0 0
..................................................TTTGTTACTGATGGTGCAGTC.......................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..................................................TTTGTTACTAATGGTGCTG............................................................................................ 19 1 1 1.00 1 0 1 0 0 0 0
..................................................TTTGTTACAGATGGTGCTGA........................................................................................... 20 2 1 1.00 1 0 1 0 0 0 0
..................................................TTTGTTACTGATGGTGCTGTCGGTTCA.................................................................................... 27 1 1 1.00 1 0 0 1 0 0 0
..................................................TTTGTTACTGATGGTGTTGT........................................................................................... 20 1 1 1.00 1 0 0 1 0 0 0
..................................................TTTGTTACTGATCGTGCTGCC.......................................................................................... 21 2 1 1.00 1 0 0 1 0 0 0
..................................................TTTGTTACTGATAGCGCTGT........................................................................................... 20 2 1 1.00 1 0 0 0 1 0 0
.................................................TTTTGTTAGTGATGGTGCTG............................................................................................ 20 1 1 1.00 1 0 1 0 0 0 0
..................................................TTTGGTACTGATGGTGCTG............................................................................................ 19 1 1 1.00 1 0 1 0 0 0 0
.................................................GTTTGTTACTGATGGTGCTG............................................................................................ 20 1 1 1.00 1 0 1 0 0 0 0
..................................................TTTGTTACTTATGGGGCTGTC.......................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0
.........................................................................................CAACGTCATCAGTGGCAACAG................................................... 21 1 1 1.00 1 0 0 1 0 0 0
........................................................................................CCAGAGTCATCAGTGGCAACAG................................................... 22 1 1 1.00 1 0 0 1 0 0 0
..................................................TTTGTTACTGATGGTGCTGTCA......................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0
..........................................................................................AGCGTCATCAGTGGCAACAG................................................... 20 0 1 1.00 1 0 0 1 0 0 0
..................................................TTTGTTACTGATGGTGCTGTTGGTT...................................................................................... 25 2 1 1.00 1 0 0 1 0 0 0
..................................................TTTGTTACTGAGGGTGCTGTC.......................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0
..................................................TTTGTTACTGTTGGTGCTGTC.......................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..................................................TTTGTAACTGATGGTGCTGT........................................................................................... 20 1 1 1.00 1 0 0 0 1 0 0
..................................................TTTGTTACTGATGGTGCTGTCGT........................................................................................ 23 1 1 1.00 1 0 0 1 0 0 0
...................................................GTGTTACTGATGGTGCTG............................................................................................ 18 1 1 1.00 1 0 1 0 0 0 0
.................................................TTTTTTTACTGATGGTGCTGT........................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
..................................................TTTGTCACTGATGGTGCTGTC.......................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0
.........................................................................................AAGCGTCATCAGTGGCAACAG................................................... 21 1 1 1.00 1 0 0 1 0 0 0
..................................................TTTGTTACGGATGGTGATGT........................................................................................... 20 2 1 1.00 1 0 0 1 0 0 0
......................................................................................ATCCAGCGTCATCAGTGGCAACAG................................................... 24 1 1 1.00 1 0 0 1 0 0 0
..................................................TTTGTTACTGGCGGTGCTGTC.......................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0
.........................................................................................CAGCGTCATCAGTCGCAACAGG.................................................. 22 2 1 1.00 1 0 0 1 0 0 0
..................................................TTTGTTACTGATGGCGCTGTCT......................................................................................... 22 2 1 1.00 1 0 0 0 1 0 0
..................................................TTTGTTACTGCTGGTGCTGTCG......................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0
..................................................TTTGTTACGGATGATGCTGT........................................................................................... 20 2 1 1.00 1 0 1 0 0 0 0
..................................................TTTGTTCCTGATGGTGCTGTC.......................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
...................................................TTTTTACTGATGGTGCTGT........................................................................................... 19 1 1 1.00 1 0 1 0 0 0 0
....................................................................................TAAGCCAGCGGCATCAGTGG......................................................... 20 1 1 1.00 1 0 0 1 0 0 0
..................................................CTTGTTACTGATGGTGCTG............................................................................................ 19 1 1 1.00 1 0 1 0 0 0 0
..................................................TTTGTTACTGATGTTGCTTTC.......................................................................................... 21 2 1 1.00 1 0 0 0 1 0 0
..................................................TTTGTTACTGATGGGGCTGT........................................................................................... 20 1 1 1.00 1 0 0 1 0 0 0
..................................................TTTGTTACTCATGGTGCTGT........................................................................................... 20 1 1 1.00 1 0 0 1 0 0 0
..................................................TTTGTTACTGATGGTGCTGTCGGTCCAT................................................................................... 28 0 1 1.00 1 0 0 1 0 0 0
..................................................TTTGTTACTGATGGCGCT............................................................................................. 18 1 1 1.00 1 1 0 0 0 0 0
..................................................TTTCTTACTGATGGTGCTGT........................................................................................... 20 1 1 1.00 1 0 1 0 0 0 0
...................................................TTGTTACTGATGGTGCTGTCG......................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0
..................................................TTTGTTACTGATGGTGCTGTCGGTTC..................................................................................... 26 1 1 1.00 1 0 0 0 0 1 0
..................................................TTTGTTACTGATGGTGATGTCG......................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0
.........................................................................................CAGCGTCATCAGTGGCAACGG................................................... 21 1 1 1.00 1 0 0 1 0 0 0
..................................................TTTGTTACTGATGGGGCGGTC.......................................................................................... 21 2 1 1.00 1 0 0 0 1 0 0
.........................................................................................AAGAGTCATCAGTGGCAACAG................................................... 21 2 1 1.00 1 0 0 0 0 1 0
..................................................TTTGTTACTGATGGTCCTGT........................................................................................... 20 1 1 1.00 1 0 1 0 0 0 0
..................................................TTTGTTACTTATGGTGCTG............................................................................................ 19 1 1 1.00 1 1 0 0 0 0 0
.......................................................................GGTCCATATTCGTTAAGT........................................................................ 18 1 1 1.00 1 0 0 1 0 0 0
..................................................TTTGTTACTGATGGTGCTTC........................................................................................... 20 2 3 1.00 3 0 3 0 0 0 0
.................................................TTTTGTTACTGATGGTGCT............................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0
..................................................TTTGTTACTGATGGTGCC............................................................................................. 18 1 1 1.00 1 1 0 0 0 0 0
........................................................................................CCAGCGTCATCAGTGGCAACAA................................................... 22 1 1 1.00 1 0 0 1 0 0 0
..................................................TTTGTTACTGATGGTGATGTC.......................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0
..................................................TTTGTTACTGATGGAGCTGT........................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
..................................................TTTGTGACTGATGGTGCTGTC.......................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0
.................................................CTTTGTTACTGATGGGGCTGTC.......................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
.........................................................................................CAGCGCCATCAGTGGCAACAG................................................... 21 1 1 1.00 1 0 0 0 1 0 0
.........................................................................................CAGCGTCATCAGTGGTAACAG................................................... 21 1 1 1.00 1 0 0 1 0 0 0
..................................................TTTGTTACTGATCGGGCTGTC.......................................................................................... 21 2 1 1.00 1 0 0 1 0 0 0
.........................................................................................CAGCGTCATCAGTGGCAACAGT.................................................. 22 1 1 1.00 1 0 0 1 0 0 0
......................................................................................AGCCAGCGTCATCAGTGGCAACAG................................................... 24 0 1 1.00 1 0 0 1 0 0 0
..................................................TTGGTTACTGATGGTGCTGTCC......................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0
..................................................TTTGTTACTGATGGTGCCGT........................................................................................... 20 1 1 1.00 1 0 0 1 0 0 0
..................................................TTTGTTACTGATGATGCTGTC.......................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
...................................................TTGTTACTCATGGTGCTG............................................................................................ 18 1 1 1.00 1 0 1 0 0 0 0
..................................................TTTGTTACCGATGGTGCTG............................................................................................ 19 1 1 1.00 1 1 0 0 0 0 0
..................................................TTCTTTACTGATGGTGCTGTC.......................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0
..................................................TTTATTACTGATGGTGCTG............................................................................................ 19 1 2 1.00 2 2 0 0 0 0 0
.........................................................................................CAGCGTCATCAGTGGCCACAG................................................... 21 1 1 1.00 1 0 0 1 0 0 0
..................................................TTTGTTAGTGATGGTGCTGTC.......................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
..................................................TTTGTTACTGATGGTGCTGTTG......................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0
...................................................TTGTTACTGATGGTGCTTT........................................................................................... 19 1 1 1.00 1 0 1 0 0 0 0
..................................................TTTGTTACTGATGGTGCTGTCGTT....................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
...................................................TTGTTACTAATGGTGCTGTC.......................................................................................... 20 1 1 1.00 1 0 1 0 0 0 0
..................................................TTTGTTACTGATGGGGCTGC........................................................................................... 20 2 1 1.00 1 1 0 0 0 0 0
..................................................TTTGTTACTGATGGTGCG............................................................................................. 18 1 2 1.00 2 2 0 0 0 0 0
.................................................TTTTGTTAGTGATGGTGCTGTC.......................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
..................................................TTTGTTACTGATGGTGCTGTCGA........................................................................................ 23 1 1 1.00 1 0 0 0 0 0 1
..................................................TTTGTTACTGATGGTGCTGTGGC........................................................................................ 23 2 1 1.00 1 0 1 0 0 0 0
...................................................TTCTTACTGATGGTGCTG............................................................................................ 18 1 1 1.00 1 0 1 0 0 0 0
..................................................TTTGTTACTGATGGTGCTTTCG......................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0
.........................................................................................CAGCGTTATCAGTGGCAACTG................................................... 21 2 1 1.00 1 0 0 1 0 0 0
..................................................TTTGTTACTGATGGCACTGTC.......................................................................................... 21 2 1 1.00 1 0 0 1 0 0 0
..................................................TTTGTTACGGATGGTGCTTT........................................................................................... 20 2 1 1.00 1 0 1 0 0 0 0
..................................................TTTCTTACTGATGGTCCTGT........................................................................................... 20 2 1 1.00 1 0 0 1 0 0 0
..................................................TTTGTTACTGATGGTGCTGGCG......................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0
..................................................ATTGTTACTGATGGTGCTGA........................................................................................... 20 2 1 1.00 1 0 1 0 0 0 0
..................................................TTTGTTACTGATGGAGCTGAC.......................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0
.................................................TTTTCTTACTGATGGTGCT............................................................................................. 19 1 1 1.00 1 0 1 0 0 0 0
.................................................CTTTGTTAGTGATGGTGCTGTG.......................................................................................... 22 3 1 1.00 1 0 1 0 0 0 0
.........................................................................................CAGAGTCATCAGTGGCAACAG................................................... 21 1 1 1.00 1 0 0 1 0 0 0
........................................................................................CCAGCGTCATCAGTGGCAACCG................................................... 22 1 1 1.00 1 0 0 1 0 0 0
.........................................................................................CAGCGGCATCAGTGGCAACAG................................................... 21 1 2 1.00 2 0 0 2 0 0 0
..................................................TTTGTTACTGACGGTGCTGTA.......................................................................................... 21 2 1 1.00 1 0 0 0 1 0 0
..................................................GTTGTTACTGATGGTGCTGTC.......................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
.................................................CTTTGTTACTGATGGTGCT............................................................................................. 19 1 1 1.00 1 0 1 0 0 0 0
..................................................TTTCTTACTGATGGTGCTGTCG......................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0
........................................................................................CAAGCGCCATCAGTGGCAACA.................................................... 21 2 1 1.00 1 0 0 1 0 0 0
..................................................TTTGTTACTGATCGTGCTGTT.......................................................................................... 21 2 1 1.00 1 0 1 0 0 0 0
...................................................TTGTTACTGATGGTGCTGC........................................................................................... 19 1 1 1.00 1 0 1 0 0 0 0
..................................................TTTGTTAATGATGGTGCTGT........................................................................................... 20 1 1 1.00 1 0 0 1 0 0 0
..................................................ATTGTTACTGATGGTGCTGT........................................................................................... 20 1 1 1.00 1 0 1 0 0 0 0
..................................................TTTGTTACTGATGGTGCTGTG.......................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
.........................................................................................CAGCGTCATAAGTGGCAACAG................................................... 21 1 1 1.00 1 0 0 1 0 0 0
........................................................................................CCAGCGTCATCAGAGGCAATA.................................................... 21 2 1 1.00 1 0 0 1 0 0 0
.........................................................................................TAGCGTCATCAGTGGCAACAG................................................... 21 1 1 1.00 1 0 0 1 0 0 0
..................................................TTTGTTACTGATCGTGCT............................................................................................. 18 1 1 1.00 1 0 0 1 0 0 0
..................................................TTTGTTACTGATGGGGCTGTA.......................................................................................... 21 2 2 0.50 1 1 0 0 0 0 0
..................................................TTAGATACTGATGGTGCTGT........................................................................................... 20 2 2 0.50 1 0 0 1 0 0 0
..................................................TTTGTTACTGATGGTGTTTTC.......................................................................................... 21 2 2 0.50 1 0 0 0 1 0 0
..................................................CTTGTTACTTATGGTGCTG............................................................................................ 19 2 4 0.50 2 2 0 0 0 0 0
..................................................TTTGTTACTGATGGTGCTCA........................................................................................... 20 2 2 0.50 1 0 0 0 1 0 0
...................................................TTTTTACTGATGGTACTGTC.......................................................................................... 20 2 2 0.50 1 0 1 0 0 0 0
.........................................................................................TAGCGCCATCAGTGGCAACAG................................................... 21 2 2 0.50 1 0 0 1 0 0 0
........................................................................................CCAGCGTCATAAGAGGCTACA.................................................... 21 3 2 0.50 1 0 0 0 1 0 0
...................................................TTGTTACTAATGGTGCTGT........................................................................................... 19 1 2 0.50 1 0 1 0 0 0 0
..................................................TTTGTTACTGATGGTGTGG............................................................................................ 19 2 4 0.50 2 2 0 0 0 0 0
.........................................................................................CAGCGTCATCAGTGGCAGCA.................................................... 20 1 2 0.50 1 0 0 1 0 0 0
..................................................TTTGTTACTGATGGTGGTG............................................................................................ 19 1 2 0.50 1 1 0 0 0 0 0
.........................................................................................CAGCGTCATCAGCGGCAACAG................................................... 21 1 2 0.50 1 0 0 1 0 0 0
..................................................TTTGTTACTGTTGGTGCTGT........................................................................................... 20 1 2 0.50 1 0 1 0 0 0 0
..................................................TTTGTTTCTGATGGTGCTGA........................................................................................... 20 2 2 0.50 1 0 0 0 1 0 0
...................................................TTTTTACTGATGGGGCTGTC.......................................................................................... 20 2 2 0.50 1 1 0 0 0 0 0
..................................................TTTGTTACTGATGGTGGTGTT.......................................................................................... 21 2 2 0.50 1 1 0 0 0 0 0
.........................................................................................CAGCGTCAACAGTGGCAACAGC.................................................. 22 1 2 0.50 1 0 0 1 0 0 0
..................................................TTTGTTACTCAGCGTGCTGTC.......................................................................................... 21 3 2 0.50 1 0 0 0 1 0 0
..................................................TTTGTTACTGATGGTGCTGAT.......................................................................................... 21 2 3 0.33 1 0 1 0 0 0 0
..................................................TTTGTTACTGATGTTGCTGA........................................................................................... 20 2 6 0.33 2 0 1 0 0 0 1
..................................................TTTGTTACTGATTGTGCTTT........................................................................................... 20 2 3 0.33 1 0 1 0 0 0 0
..................................................TTTGTTACTGATGGTACTA............................................................................................ 19 2 3 0.33 1 0 1 0 0 0 0
..................................................TTTGTTACTGATTGTGCTT............................................................................................ 19 2 4 0.25 1 0 0 1 0 0 0
..................................................TTTGTTACTGATTGTGCTTCC.......................................................................................... 21 3 4 0.25 1 0 0 1 0 0 0
.....................................................................................................................................AAGAACCAGTAGGGTACGGC........ 20 3 4 0.25 1 0 0 1 0 0 0
..................................................TTTGTTACTGATGGTGTTT............................................................................................ 19 2 4 0.25 1 0 1 0 0 0 0
..................................................TTTGTTACGGATGGTGCAGGC.......................................................................................... 21 3 4 0.25 1 0 0 1 0 0 0
..................................................TTTGTTACTGACGGCCCTGT........................................................................................... 20 3 5 0.20 1 0 0 1 0 0 0
..................................................TTTGTTACTGGTGGGGCTG............................................................................................ 19 2 5 0.20 1 1 0 0 0 0 0
.........................................................................................TAGCGTCATCAGAGGCATCAGC.................................................. 22 3 5 0.20 1 0 0 1 0 0 0
.........................................................................................CAGCGCCATCAGTAGCAACAG................................................... 21 2 6 0.17 1 0 0 1 0 0 0
..................................................TTTGTTAATGATGGTGCTTT........................................................................................... 20 2 6 0.17 1 0 1 0 0 0 0
..................................................TTTCTTACTGATTGTGCTGTT.......................................................................................... 21 3 7 0.14 1 0 0 1 0 0 0
.................................................GTTTGTTATTGATGGTGCTG............................................................................................ 20 2 7 0.14 1 0 1 0 0 0 0
..................................................TTTGTTACTGATGGTTCTT............................................................................................ 19 2 8 0.13 1 0 1 0 0 0 0
....................................................TGTTACTGATGGTGCTTTG.......................................................................................... 19 2 9 0.11 1 0 1 0 0 0 0
.........................................................................................CAGCGCCATCCGTGGCCACAG................................................... 21 3 9 0.11 1 0 0 1 0 0 0
........................................................................................................CAACGGGCGCGCCGCAACC...................................... 19 3 19 0.11 2 0 1 1 0 0 0
.....................................................TTTACTGATAGTGCTGTC.......................................................................................... 18 2 14 0.07 1 1 0 0 0 0 0
.................................................TTTTGCTACTGATTTTGCTGTC.......................................................................................... 22 3 15 0.07 1 0 0 0 0 1 0
..................................................TTTGTTACTGATGTTGCTT............................................................................................ 19 2 18 0.06 1 0 1 0 0 0 0
.........................................................................................CAGCGGGATCAGTGACAACAG................................................... 21 3 18 0.06 1 0 0 0 1 0 0
..................................................TTTGTTAGTGATGCTGCTG............................................................................................ 19 2 20 0.05 1 0 0 1 0 0 0
..................................................TTTGTTACTGATGGTGAAC............................................................................................ 19 3 20 0.05 1 0 0 0 1 0 0

Anti-sense strand reads

TAACCTTAGCACACACGTAAACCTTTTGGTTTGGCAGACGCACACGAAGAAAACAATGACTACCACGACAGCCAGGTATAAGCAATTCGGTCGCAGTAGTCACCGTTGTCGGCGTGGCGTTGGGTTGGGGGTCTTCTTGCTCATACCATACCGTACGGGAC

************************************..((((.((((..((.((((((((((((((((((....................)))))))))))))))))).))..)))))))).....*********************************** 		Read size # Mismatch Hit Count Total Norm Total V057

head

 V050

head
................................................GAGAATAATGACTACCACGAT............................................................................................ 21 3 5 0.20 1 1 0
......................................................................................................CCATGGTCGGCGTGGCGTT........................................ 19 2 5 0.20 1 0 1
..................................................................................................................TGGCGGTGGGCTGGGGGTC............................ 19 2 7 0.14 1 1 0
..............................................................................................................GGCGAGGCGATGGGTTGG................................. 18 2 11 0.09 1 1 0
......................................................................................................................GTCGGGTTGGGGGTGTTC......................... 18 2 18 0.06 1 1 0
..................................................................................................................TGGCGGTGGGCTGGGGATC............................ 19 3 20 0.05 1 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droPer2 scaffold_0:5531577-5531737 - dpe_24 confident ATTGGAATCGTGTGTGCATTTGGAAA-A------------------------------------------CCAAACCGTCTGCGTGTGCTTCTTTTGTTACTG--ATGGTGCTGTCGGTC------------------------------------------CATATTCGTTAAGCCAGCGTCATCAGTGGC-AACAGCCGCACCGCAACCCAACCCCC-----------AGA------------AGAACGAGTATGGTATGGCATGCCCTG
dp5 2:14879881-14880041 + dps-mir-2575 Known_mirbase ATTGGAATCGTGTGTGCATTTGGAAA-A------------------------------------------CCAAACCGTCTGCGTGTGCTTCTTTTGTTACTG--ATGGTGCTGTCGGTC------------------------------------------CATATTCGTTAAGCCAGCGTCATCAGTGGC-AACAGCCGCACCGCAACCCAACCCCC-----------AGA------------AGAACGAGTATGGTATGGCATGCCCTG
droVir3 scaffold_13047:15246079-15246239 + ATTTAC---------------------------TGCTGGTTACATATACATAT--------------------------ATGCGCGAGTTGCCGTTGTTGTTGTCATG-TTCATCTTCTTCTTGCTCTTGTTGTTGTTGTTGCTGTTGTAATCGGTGTGGTTCGGTTTC-------------------TGGC-AGGCAGCGAACCGCACCGCAACCCCC-----------AAA------------AGTATG-----------CCATGCC---
droMoj3 scaffold_1785:1293-1438 + GGCAACATTT---TTGTAATTGAAAA-ATTTACTGTTGGTTACAT----------------------------------ATGCGCGAGTTGGCGTTGTTGGTGT---------------TCTTGTTCCTTTTGTTGTTGTTGCTGCCA---------TGGCTCAGATTC-------------------TGGC-AGGCGGCGCACCACACCGCAACCCCC-----------AAA------------AGTATG---------------------
droGri2 scaffold_14830:4736372-4736518 - ATTTAT---------------------------TGCTTGTTACAT----------------------------------ATGCGCGAGTTGCTGTTGTTGCTGTTATCCTGCTGCTGCTTCATCTTCAGATTGTTGTTGTTGTTGTCGGTTTGGTTCGGGTTCGGGTTC-------------------AGGC-AGACGGCTCACCGCACCGCAACCCCC-----------AAA------------AGTATG---------------------
droRho1 scf7180000779900:399969-400077 + ACAAGAATTTTATGTTAAACTAAAAAGA--------------------------GT--CTTTTAAAA-AACCAT-----------------------------------------------------------------------------------------------GTTGACAACGCGTCATCAGTGGC-CGCAGCC----------------TCTGGAAATCTCGAAAACCCCCCTTTGAAAAAAC----------------------
droBia1 scf7180000302402:502228-502322 + ACCAGAATTCTGTTTCAATTTAAAAA--------------------------TACTACAACTTAAATAGGGCTT-----------------------------------------------------------------------------------------------GTGGGCTACGCGTCATCAATGGCCCACAGCC----------------TCAGGAAAACTTGTAA----------------------------------------
droTak1 scf7180000415256:243153-243269 + ACCAGAATTTTAGTTAAATTAAAAAA-A------------------------TTTTGCCATTTAAATCTCGCAT-----------------------------------------------------------------------------------------------GCTAACTACGCGTCATCAGTTGC-CGCAGCC----------------TATGGAAAACTTGTAAA------------AAAA---CCCTCCTTTGGCAAACC---

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
ATTGGAATCGTGTGTGCATTTGGAAA-A------------------------------------------CCAAACCGTCTGCGTGTGCTTCTTTTGTTACTG--ATGGTGCTGTCGGTC------------------------------------------CATATTCGTTAAGCCAGCGTCATCAGTGGC-AACAGCCGCACCGCAACCCAACCCCC-----------AGA------------AGAACGAGTATGGTATGGCATGCCCTGSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.............................................................................................TTTGTTACTG--ATGGTGCTGTC............................................................................................................................................................2116180.0061805350590211041069
.............................................................................................TTTGTTACTG--ATGGTGCTG..............................................................................................................................................................1912745.002745805189208346
.............................................................................................TTTGTTACTG--ATGGTGCTGT.............................................................................................................................................................201764.0076468595125687
................................................................................................................................................................................CAGCGTCATCAGTGGC-AACAG..........................................................................211140.0014043945781
..............................................................................................TTGTTACTG--ATGGTGCTG..............................................................................................................................................................181130.0013021280000
.............................................................................................TTTGTTACTG--ATGGTGCT...............................................................................................................................................................181129.0012976510110
.............................................................................................TTTGTTACTG--ATGGTGCTGA.............................................................................................................................................................20189.00891780091
.............................................................................................TTTGTTACTG--ATGGTGCTT..............................................................................................................................................................19179.00791750120
..............................................................................................TTGTTACTG--ATGGTGCTGTC............................................................................................................................................................20156.00566490010
..............................................................................................TTGTTACTG--ATGGTGCTGT.............................................................................................................................................................19142.00420420000
...............................................................................................................................................................................CCAGCGTCATCAGTGGC-AACAG..........................................................................22139.003900013233
.............................................................................................TTTGTTACTG--ATGGTGCTGC.............................................................................................................................................................20134.00348230030
.............................................................................................TTTGTTACTG--ATGGTGCTGTT............................................................................................................................................................21132.00323200540
.............................................................................................TTTGTTACTG--ATGGTGCTGTCG...........................................................................................................................................................22128.00280617131
...............................................................................................................................................................................CCAGCGTCATCAGTGGC-AACA...........................................................................21119.0019001990
................................................................................................................................................................................CAGCGTCATCAGTGGC-AACA...........................................................................20118.00180024120
.............................................................................................TTTGTTACTG--ATGGTGCTGG.............................................................................................................................................................20115.00151320000
....................................................................................................................GGTC------------------------------------------CATATTCGTTAAGC................................................................................................18112.0012811110
.............................................................................................TTTGTTACTG--ATGGTGCTGTCT...........................................................................................................................................................2217.007300310
.............................................................................................TTTGTTACTG--ATGGTGCTA..............................................................................................................................................................1916.006050010
............................................................................................TTTTGTTACTG--ATGGTGCTGTC............................................................................................................................................................2214.004301000
...............................................................................................TGTTACTG--ATGGTGCTGTC............................................................................................................................................................1913.003120000
.............................................................................................TTTGTTACTG--ATGGTGCTGTCC...........................................................................................................................................................2213.003120000
............................................................................................TTTTGTTACTG--ATGGTGCTGT.............................................................................................................................................................2113.003020010
............................................................................................TTTTGTTACTG--ATGGTGCTG..............................................................................................................................................................2013.003120000
.............................................................................................TTTGTTACTG--ATGGTGCTGAA............................................................................................................................................................2113.003020010
..............................................................................................TTGTTACTG--ATGGTGCTGA.............................................................................................................................................................1913.003030000
.............................................................................................TTTGTTACTG--ATGGTGCTC..............................................................................................................................................................1912.002110000
................................................................................................................................................................................CAGCGTCATCAGTGGC-AACAGA.........................................................................2212.002000110
.............................................................................................................................................................................AGCCAGCGTCATCAGTGGC-AACA...........................................................................2312.002010100
................................................................................................................................................................................CAGCGTCATCAGTGGC-AAC............................................................................1912.002000020
...............................................................................................TGTTACTG--ATGGTGCTGT.............................................................................................................................................................1812.002020000
.............................................................................................TTTGTTACTG--ATGGTGCTGTA............................................................................................................................................................2112.002001100
................................................................................................GTTACTG--ATGGTGCTGTC............................................................................................................................................................1812.002020000
..............................................................................................TTGTTACTG--ATGGTGCTGTT............................................................................................................................................................2012.002020000
...............................................................................................................................................................................CCAGCGTCATCAGTGGC-AAC............................................................................2012.002000110
..............................................................................................TTGTTACTG--ATGGTGCTT..............................................................................................................................................................1831.334040000
.............................................................................................................................................................................AGCCAGCGTCATCAGTGGC-AA.............................................................................2111.001000010
.............................................................................................TTTGTTACTG--ATGGTGCTGTCA...........................................................................................................................................................2211.001000010
.................................................................................................................................................................................AGCGTCATCAGTGGC-AACAG..........................................................................2011.001000010
.............................................................................................TTTGTTACTG--ATGGTGCTGTCGT..........................................................................................................................................................2311.001000010
.............................................................................................TTTGTTACTG--ATGGTGCTGTCGGTC------------------------------------------CAT...........................................................................................................2811.001000010
..............................................................................................TTGTTACTG--ATGGTGCTGTCG...........................................................................................................................................................2111.001010000
....................................................................................................................GGTC------------------------------------------CATATTCGTTAAGT................................................................................................1811.001000010
.............................................................................................TTTGTTACTG--ATGGTGCTTC.............................................................................................................................................................2031.003030000
............................................................................................TTTTGTTACTG--ATGGTGCT...............................................................................................................................................................1911.001010000
.............................................................................................TTTGTTACTG--ATGGTGCC...............................................................................................................................................................1811.001100000
...............................................................................................................................................................................CCAGCGTCATCAGTGGC-AACAA..........................................................................2211.001000010
................................................................................................................................................................................CAGCGTCATCAGTGGC-AACAGT.........................................................................2211.001000010
.............................................................................................................................................................................AGCCAGCGTCATCAGTGGC-AACAG..........................................................................2411.001000010
.............................................................................................TTTGTTACTG--ATGGTGCG...............................................................................................................................................................1821.002200000
.............................................................................................TTTGTTACTG--ATGGTGCTGTCGA..........................................................................................................................................................2311.001000001
..............................................................................................TTGTTACTG--ATGGTGCTGC.............................................................................................................................................................1911.001010000
.............................................................................................TTTGTTACTG--ATGGTGCTGTG............................................................................................................................................................2111.001100000
.............................................................................................TTTGTTACTG--ATGGTGCTCA.............................................................................................................................................................2020.501000100
.............................................................................................TTTGTTACTG--ATGGTGCTGAT............................................................................................................................................................2130.331010000
.............................................................................................TTTGTTACTG--ATGGTGAAC..............................................................................................................................................................19200.051000100
dp5
ATTGGAATCGTGTGTGCATTTGGAAA-A------------------------------------------CCAAACCGTCTGCGTGTGCTTCTTTTGTTACTG--ATGGTGCTGTCGGTC------------------------------------------CATATTCGTTAAGCCAGCGTCATCAGTGGC-AACAGCCGCACCGCAACCCAACCCCC-----------AGA------------AGAACGAGTATGGTATGGCATGCCCTGSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.............................................................................................TTTGTTACTG--ATGGTGCTGTC............................................................................................................................................................21118604.001860423742124627877273124111069469
.............................................................................................TTTGTTACTG--ATGGTGCTG..............................................................................................................................................................19116756.0016756204127392332160145013542
.............................................................................................TTTGTTACTG--ATGGTGCTGT.............................................................................................................................................................2017515.0075154637759533850267719155
.............................................................................................TTTGTTACTG--ATGGTGCTT..............................................................................................................................................................1911358.001358714800806000001
.............................................................................................TTTGTTACTG--ATGGTGCT...............................................................................................................................................................181958.0095814710836870000013
.............................................................................................TTTGTTACTG--ATGGTGCTGC.............................................................................................................................................................201886.0088613431818000002
..............................................................................................TTGTTACTG--ATGGTGCTG..............................................................................................................................................................181883.00883087706000000
.............................................................................................TTTGTTACTG--ATGGTGCTGTT............................................................................................................................................................211369.0036941403218020020
.............................................................................................TTTGTTACTG--ATGGTGCTGA.............................................................................................................................................................201326.003265228088000005
..............................................................................................TTGTTACTG--ATGGTGCTGTC............................................................................................................................................................201292.002920258528000001
..............................................................................................TTGTTACTG--ATGGTGCTGT.............................................................................................................................................................191278.00278026808000011
.............................................................................................TTTGTTACTG--ATGGTGCC...............................................................................................................................................................181125.00125101123000000
................................................................................................................................................................................CAGCGTCATCAGTGGC-AACAG..........................................................................211116.001160815339406005
.............................................................................................TTTGTTACTG--ATGGTGCTGTA............................................................................................................................................................211101.001010121470010004
.............................................................................................TTTGTTACTG--ATGGTGCTA..............................................................................................................................................................19190.0090342043000002
.............................................................................................TTTGTTACTG--ATGGTGCTC..............................................................................................................................................................19187.0087111075000000
.............................................................................................TTTGTTACTG--ATGGTGCTGTCG...........................................................................................................................................................22145.004501943280009
............................................................................................TTTTGTTACTG--ATGGTGCT...............................................................................................................................................................19144.0044323018000000
............................................................................................TTTTGTTACTG--ATGGTGCTG..............................................................................................................................................................20140.004003403000003
............................................................................................TTTTGTTACTG--ATGGTGCTGTC............................................................................................................................................................22140.0040114618100000
...............................................................................................TGTTACTG--ATGGTGCTGTC............................................................................................................................................................19127.002701439000001
.............................................................................................TTTGTTACTG--ATGGTGCTGG.............................................................................................................................................................20125.0025113011000000
..............................................................................................TTGTTACTG--ATGGTGCTGA.............................................................................................................................................................19123.002302201000000
.............................................................................................TTTGTTACTG--ATGGTGCTGTCT...........................................................................................................................................................22121.002119011000000
...............................................................................................................................................................................CCAGCGTCATCAGTGGC-AACAG..........................................................................22120.00200311483000
............................................................................................TTTTGTTACTG--ATGGTGCTGT.............................................................................................................................................................21120.002001117000001
................................................................................................................................................................................CAGCGTCATCAGTGGC-AACA...........................................................................20119.00190410653000
..............................................................................................TTGTTACTG--ATGGTGCTGTT............................................................................................................................................................20118.001801701000000
...............................................................................................TGTTACTG--ATGGTGCTGT.............................................................................................................................................................18117.001701700000000
.............................................................................................TTTGTTACTG--ATGGTGCTGTCC...........................................................................................................................................................22116.00161427000002
..............................................................................................TTGTTACTG--ATGGTGCTT..............................................................................................................................................................18313.003903900000000
.............................................................................................TTTGTTACTG--ATGGTGCTGTG............................................................................................................................................................21110.00100316000000
...............................................................................................................................................................................CCAGCGTCATCAGTGGC-AACA...........................................................................2119.0090201240000
................................................................................................GTTACTG--ATGGTGCTGTC............................................................................................................................................................1819.0090603000000
.............................................................................................TTTGTTACTG--ATGGTGCTTC.............................................................................................................................................................2039.002700027000000
.............................................................................................TTTGTTACTG--ATGGTGCTGTCA...........................................................................................................................................................2218.0080401000300
.............................................................................................TTTGTTACTG--ATGGTGCTGAA............................................................................................................................................................2117.0070402000001
.............................................................................................TTTGTTACTG--ATGGTGC................................................................................................................................................................1716.0060000000006
..............................................................................................TTGTTACTG--ATGGTGCTA..............................................................................................................................................................1814.0040400000000
............................................................................................TTTTGTTACTG--ATGGTGC................................................................................................................................................................1814.0040004000000
.............................................................................................TTTGTTACTG--ATGGTGCTAC.............................................................................................................................................................2014.0040103000000
.............................................................................................TTTGTTACTG--ATGGTGCTGTCGGT.........................................................................................................................................................2414.0040000000022
...............................................................................................................................................................................CCAGCGTCATCAGTGGC-AAC............................................................................2013.0030012000000
................................................................................................................................................................................CAGCGTCATCAGTGGC-AACAGC.........................................................................2213.0030020100000
............................................................................................TTTTGTTACTG--ATGGTGCTT..............................................................................................................................................................2013.0030201000000
..............................................................................................TTGTTACTG--ATGGTGCTGC.............................................................................................................................................................1913.0030102000000
.............................................................................................TTTGTTACTG--ATGGTGCTGTTT...........................................................................................................................................................2213.0030003000000
............................................................................................TTTTGTTACTG--ATGGTGCTGA.............................................................................................................................................................2113.0030300000000
.............................................................................................TTTGTTACTG--ATGGTGCTGAT............................................................................................................................................................2112.0020101000000
............................................................................................TTTTGTTACTG--ATGGTGCTGC.............................................................................................................................................................2112.0020011000000
............................................................................................TTTTGTTACTG--ATGGTGCTGTT............................................................................................................................................................2212.0020101000000
.............................................................................................TTTGTTACTG--ATGGTGCA...............................................................................................................................................................1832.0060204000000
............................................................................................TTTTGTTACTG--ATGGTGCC...............................................................................................................................................................1912.0020002000000
.............................................................................................TTTGTTACTG--ATGGTGCTGTCGGTC------------------------------------------CAT...........................................................................................................2812.0020110000000
.............................................................................................TTTGTTACTG--ATGGTGCTTA.............................................................................................................................................................2022.0040004000000
..............................................................................................TTGTTACTG--ATGGTGCTC..............................................................................................................................................................1821.5030201000000
.............................................................................................TTTGTTACTG--ATGGTGCTGTAA...........................................................................................................................................................2211.0010000000010
.............................................................................................TTTGTTACTG--ATGGTGCTAA.............................................................................................................................................................2011.0010100000000
.............................................................................................TTTGTTACTG--ATGGTGCTGAG............................................................................................................................................................2111.0010100000000
..............................................................................................TTGTTACTG--ATGGTGCTGTCG...........................................................................................................................................................2111.0010100000000
droVir3
ATTTAC---------------------------TGCTGGTTACATATACATAT--------------------------ATGCGCGAGTTGCCGTTGTTGTTGTCATG-TTCATCTTCTTCTTGCTCTTGTTGTTGTTGTTGCTGTTGTAATCGGTGTGGTTCGGTTTC-------------------TGGC-AGGCAGCGAACCGCACCGCAACCCCC-----------AAA------------AGTATG-----------CCATGCC---SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
..........................................................................................................................TGCTCTTGTTGTTGTTGTT...................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000100000000000000000
...............................................................................................................................TTGTTGTTGTTGTTGCTGTTGTA..........................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000001000000
droMoj3
GGCAACATTT---TTGTAATTGAAAA-ATTTACTGTTGGTTACAT----------------------------------ATGCGCGAGTTGGCGTTGTTGGTGT---------------TCTTGTTCCTTTTGTTGTTGTTGCTGCCA---------TGGCTCAGATTC-------------------TGGC-AGGCGGCGCACCACACCGCAACCCCC-----------AAA------------AGTATG---------------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
No Reads
droGri2
ATTTAT---------------------------TGCTTGTTACAT----------------------------------ATGCGCGAGTTGCTGTTGTTGCTGTTATCCTGCTGCTGCTTCATCTTCAGATTGTTGTTGTTGTTGTCGGTTTGGTTCGGGTTCGGGTTC-------------------AGGC-AGACGGCTCACCGCACCGCAACCCCC-----------AAA------------AGTATG---------------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
No Reads
droRho1
ACAAGAATTTTATGTTAAACTAAAAAGA--------------------------GT--CTTTTAAAA-AACCAT-----------------------------------------------------------------------------------------------GTTGACAACGCGTCATCAGTGGC-CGCAGCC----------------TCTGGAAATCTCGAAAACCCCCCTTTGAAAAAAC----------------------SizeHit CountTotal NormTotal
No Reads
droBia1
ACCAGAATTCTGTTTCAATTTAAAAA--------------------------TACTACAACTTAAATAGGGCTT-----------------------------------------------------------------------------------------------GTGGGCTACGCGTCATCAATGGCCCACAGCC----------------TCAGGAAAACTTGTAA----------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
ACCAGAATTTTAGTTAAATTAAAAAA-A------------------------TTTTGCCATTTAAATCTCGCAT-----------------------------------------------------------------------------------------------GCTAACTACGCGTCATCAGTTGC-CGCAGCC----------------TATGGAAAACTTGTAAA------------AAAA---CCCTCCTTTGGCAAACC---SizeHit CountTotal NormTotal
No Reads

Generated: 10/20/2015 at 07:28 PM