ID:

dpe_224

 Coordinate:

scaffold_3375:49-111 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-30.2 -30.2 -30.1

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
Gypsy-4_DPer-I-intLTRGypsy+
mature
  1. scaffold_3223:117-141 -
  2. dpe_224  scaffold_3375:50-74 -
star
  1. scaffold_3223:156-178 -
  2. dpe_224  scaffold_3375:89-111 -

Sense Strand Reads

ACAGGGGTCCCTGGCGCCCTCTTTCGGTCTTGCGCCTGGCGGTGTTGCCATATCTCTTCAATGCGTGCGATCGCTTCGATTTCCCCCTATCGATGGTTCGCGGAGGAGCCTCTGTCAGCGCCCTGCCCGATATGGGTAATGGTCGCTATTCTGACCTACTC
***********************************..((((((((((.((...((((((..((((.((.((((.................)))).)).))))))))))....)).)))))))..)))********************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V042
embryo
 V057
head
 V111
male body
.......................................................................................TATCGATGGTTCGCGGAGGAGCCTC................................................. 25 0 2 41.00 82 77 4 0 0 1
.......................................................................................TATCGATGGTTCGCGGAGGAGC.................................................... 22 0 2 32.50 65 60 5 0 0 0
.......................................................................................TATCGATGGTTCGCGGAGGAG..................................................... 21 0 2 30.00 60 50 5 5 0 0
..................................................TATCTCTTCAATGCGTGCGATCGATT..................................................................................... 26 1 11 22.64 249 244 3 2 0 0
.......................................................................................TATCGATGGTTCGCGGAGGAGCCT.................................................. 24 0 2 21.50 43 40 1 2 0 0
.......................................................................................TATCGATGGTTCGCGGAGGAGCC................................................... 23 0 2 10.00 20 19 0 1 0 0
.......................................................................................TATCGATGGTTCGCGGAGGAGCCTCTG............................................... 27 0 2 8.50 17 17 0 0 0 0
.......................................................................................TATCGATGGTTCGCGGAGGA...................................................... 20 0 2 8.00 16 15 0 1 0 0
..................................................TATCTCTTCAATGCGTGCGATCGAT...................................................................................... 25 1 11 7.18 79 56 23 0 0 0
.......................................................................................TATCGATGGTTCGCGGAGG....................................................... 19 0 2 5.00 10 10 0 0 0 0
.......................................................................................TATCGATGGTTCGCGGAGGAGT.................................................... 22 1 2 5.00 10 8 0 2 0 0
..................................................TATCTCTTCAATGCGTGCGATCG........................................................................................ 23 0 2 3.50 7 7 0 0 0 0
.......................................................................................TATCGATGGTTCGCGGAG........................................................ 18 0 2 2.50 5 4 0 1 0 0
........................................................................................ATCGATGGTTCGCGGAGGAGCCTCTG............................................... 26 0 2 2.50 5 5 0 0 0 0
.......................................................................................TATCGATGGTTCGCGGAGGAGCCTCT................................................ 26 0 2 2.00 4 4 0 0 0 0
..................................................TATCTCTTCAATGCGTGCGATCGCTT..................................................................................... 26 0 2 2.00 4 4 0 0 0 0
............................................................................CGATTTTCCCCTATCGATGGTTCGCG........................................................... 26 1 2 2.00 4 2 0 2 0 0
...........................................................................................................................TGCCCGATATGGGTAATGGTCGCT.............. 24 0 2 2.00 4 2 2 0 0 0
..................................................TATCTCTTCAATGCGTGCGATCGA....................................................................................... 24 1 11 1.91 21 20 1 0 0 0
.......................................................................................TATCGATGGTTCGCGGAGGAA..................................................... 21 1 2 1.50 3 3 0 0 0 0
.................................................ATATCTCTTCAATGCGTGCGATCGATT..................................................................................... 27 1 2 1.50 3 3 0 0 0 0
........................................................................................ATCGATGGTTCGCGGAGGAGC.................................................... 21 0 2 1.50 3 3 0 0 0 0
........................................................................................ATCGATGGTTCGCGGAGGAG..................................................... 20 0 2 1.50 3 3 0 0 0 0
.......................................................................................TATCGATGGTTCGCGGAGGAGA.................................................... 22 1 2 1.00 2 2 0 0 0 0
..................................................TATCTCTTGAATGCGTGCGATCGATT..................................................................................... 26 2 13 1.00 13 13 0 0 0 0
.............................................TGCCATATCTCTTCAATGCGTGCGAT.......................................................................................... 26 0 2 1.00 2 2 0 0 0 0
.................................................................................TTCCCCTATCGATGGTTCGCGGAG........................................................ 24 1 2 1.00 2 2 0 0 0 0
...................................................ATCTCTTCAATGCGTGCGATCGATT..................................................................................... 25 1 11 1.00 11 11 0 0 0 0
.......................................................................................TATCGATGATTCGCGGAGGAGCCTC................................................. 25 1 2 1.00 2 2 0 0 0 0
..................................................TATCTCTTCAATGCGTGCGATC......................................................................................... 22 0 2 1.00 2 2 0 0 0 0
......................................................................................CTATCGATGGTTCGCGGAGGAGC.................................................... 23 0 2 1.00 2 2 0 0 0 0
.......................................................................................TATCGATGGTTCGCGGAGA....................................................... 19 1 2 1.00 2 1 1 0 0 0
............................................................................CGATTTTCCCCTATCGATGGTTCGCGGA......................................................... 28 1 2 1.00 2 2 0 0 0 0
.........................................................................................TCGATGGTTCGCGGAGGAGCCTC................................................. 23 0 2 1.00 2 2 0 0 0 0
............................................................................CGATTTTCCCCTATCGATGGTTCGCGG.......................................................... 27 1 2 1.00 2 2 0 0 0 0
........................................................................................ATCGATGGTTCGCGGAGGAGCCTC................................................. 24 0 2 1.00 2 2 0 0 0 0
..................................................TATCTCTTCAATGCGTGCGATCGCT...................................................................................... 25 0 2 1.00 2 2 0 0 0 0
........................................................................................ATCGATGGGTCGCGGAGGAGC.................................................... 21 1 2 1.00 2 2 0 0 0 0
.................................................................................TTCCCCTATCGATGGTTCGCGGAGG....................................................... 25 1 2 1.00 2 0 2 0 0 0
..................................................TATCTCTTAAATGCGTGCGATCGATT..................................................................................... 26 2 13 0.92 12 12 0 0 0 0
.......................................................................................TATCGATGGTTCGCGGAGGAAA.................................................... 22 2 2 0.50 1 1 0 0 0 0
........................................................................................ATCGATGGTTCGCGGAGGA...................................................... 19 0 2 0.50 1 1 0 0 0 0
.......................................................................................TATCGATGTTTCGCGGAGGAGCCT.................................................. 24 1 2 0.50 1 1 0 0 0 0
.......................................................................................TATCGATGTTTCGCGGAGGAGCCTCTG............................................... 27 1 2 0.50 1 1 0 0 0 0
..................................................................................TCCCCTATCGATGGTTCGCGGAGG....................................................... 24 1 2 0.50 1 1 0 0 0 0
.......................................................................................TATCGATGGTTCGCGGAGGAGCCTTT................................................ 26 1 2 0.50 1 1 0 0 0 0
........................................................................................ATCGATGGTTCGCGGAGGAGCCTCT................................................ 25 0 2 0.50 1 1 0 0 0 0
.............................................TGCCATATCTCTTCAATGCGTGCG............................................................................................ 24 0 2 0.50 1 1 0 0 0 0
........................................................................................ATCGATGGTTCGCGGAGGAGCC................................................... 22 0 2 0.50 1 1 0 0 0 0
.......................................................................................TATCGATGGTTCGCGGAGGAGCCTCGGC.............................................. 28 2 2 0.50 1 1 0 0 0 0
..................................................................................TCCCCTATCGATGGTTCGCGA.......................................................... 21 2 2 0.50 1 1 0 0 0 0
.......................................................................................TATCGATGGTTCGCGGAGGAGCCTCGG............................................... 27 1 2 0.50 1 1 0 0 0 0
.........................................................................................TCGATGGTTCGCGGAGGAGCCT.................................................. 22 0 2 0.50 1 1 0 0 0 0
................................................................................TTTCCCCTATCGATGGTTCGCGGAGG....................................................... 26 1 2 0.50 1 1 0 0 0 0
.......................................................................................TATCGATAGTTCGCGGAGGAGCCT.................................................. 24 1 2 0.50 1 1 0 0 0 0
..................................................................................TCCCCTATCGATGGTTCGCGGAGGAGC.................................................... 27 1 2 0.50 1 1 0 0 0 0
.......................................................................................TATCTATGGTTCGCGGAGGAG..................................................... 21 1 2 0.50 1 1 0 0 0 0
......................................................................................................TAGGAGCCTCAGACAGCGCCC...................................... 21 3 2 0.50 1 0 0 0 1 0
..................................................TATCTCTTCAATGCGTGC............................................................................................. 18 0 2 0.50 1 1 0 0 0 0
...........................................................................................................................TGCCCGATATGGGTAATGGTCGCTATTC.......... 28 0 2 0.50 1 1 0 0 0 0
.......................................................................................TATCGATGGTTCGCGGAGGAGCCTTAA............................................... 27 3 2 0.50 1 1 0 0 0 0
........................................................................................ATCGATGGTTCGCGGAGGAGCCT.................................................. 23 0 2 0.50 1 1 0 0 0 0
.......................................................................................TATCGATGGTTCGCTGAGGAGCCTC................................................. 25 1 2 0.50 1 1 0 0 0 0
.......................................................................................TATCGATGGTTCGCGGAGGGGCCTCT................................................ 26 1 2 0.50 1 1 0 0 0 0
......................................................................................CTATCGATGGTTCGCGGAGGA...................................................... 21 0 2 0.50 1 1 0 0 0 0
..................................................................................GCCCCTATCGATGGTTCGCGGAGGAGC.................................................... 27 1 2 0.50 1 1 0 0 0 0
.........................................................................................TCGATGGTTCGCGGAGGAGC.................................................... 20 0 2 0.50 1 1 0 0 0 0
..................................................................................TCCCCTATCGATGGTTCGCGGAGGAG..................................................... 26 1 2 0.50 1 1 0 0 0 0
......................................................................................TTATCGATGGTTCGCGGAGGAGC.................................................... 23 1 2 0.50 1 1 0 0 0 0
...................................................ATCTCTTCAATGCGTGCGATC......................................................................................... 21 0 2 0.50 1 1 0 0 0 0
..................................................TATCTCTTCAATGCGTGCGATCGTTT..................................................................................... 26 1 2 0.50 1 1 0 0 0 0
.......................................................................................TATCGATGATTCGCGGAGGAGCCTCTG............................................... 27 1 2 0.50 1 1 0 0 0 0
.......................................................................................TATCGATGGTTCGCGGAGGAC..................................................... 21 1 2 0.50 1 1 0 0 0 0
.......................................................................................TATCGATGATTCGCGGAGGAGC.................................................... 22 1 2 0.50 1 1 0 0 0 0
..................................................TATCTCTTCAATGCGTGCGATCGGTT..................................................................................... 26 1 2 0.50 1 0 0 1 0 0
................................................................................TTTCCCCTATCGATGGTTCGCGGAC........................................................ 25 2 2 0.50 1 1 0 0 0 0
.................................................................................TTCCCCTATCGATGGTTCGCGGA......................................................... 23 1 2 0.50 1 1 0 0 0 0
............................................................................CGATTTCCCCCTATCGATGGTTCGCGG.......................................................... 27 0 2 0.50 1 1 0 0 0 0
...............................................................................TTTTCCCCTATCGATGGTTCGCGG.......................................................... 24 1 2 0.50 1 1 0 0 0 0
.......................................................................................TATCGATGGTTCGCGGAGGAGCCGCT................................................ 26 1 2 0.50 1 1 0 0 0 0
...........................................................................GCGATTTTCCCCTATCGATGGTTCGCGG.......................................................... 28 2 2 0.50 1 1 0 0 0 0
.................................................ATATCTCTTCAATGCGTGCGATCGAT...................................................................................... 26 1 2 0.50 1 1 0 0 0 0
.......................................................................................TGTCGATGGTTCGCGGAGGAG..................................................... 21 1 2 0.50 1 1 0 0 0 0
.......................................................................................TATCGATGGTTCGCGGGGGAGC.................................................... 22 1 2 0.50 1 0 1 0 0 0
......................................................................................CTATCGATGGTTCGCGGAGGAA..................................................... 22 1 2 0.50 1 1 0 0 0 0
...............................................................................TTTTCCCCTATCGATGGTTCGCGGA......................................................... 25 1 2 0.50 1 1 0 0 0 0
........................................................................................ATCGATGGTTCGCGGAGG....................................................... 18 0 2 0.50 1 1 0 0 0 0
.......................................................................................TATCGATGATTCGCGGAGGAG..................................................... 21 1 2 0.50 1 1 0 0 0 0
...........................................................................................GATGGTTCGCGGAGGAGT.................................................... 18 1 2 0.50 1 1 0 0 0 0
.......................................................................................TATCGATGATTCGCGGAGGAGGCT.................................................. 24 2 2 0.50 1 1 0 0 0 0
......................................................................................CTATCGATGGTTCGCGGAGGAG..................................................... 22 0 2 0.50 1 1 0 0 0 0
...........................................................................................................................TGCCCGATATGGGTAATGGTCGCTAT............ 26 0 2 0.50 1 1 0 0 0 0
..................................................................................TCCCCTATCGATGGTTCGCGGA......................................................... 22 1 2 0.50 1 1 0 0 0 0
...........................................................................................................................TCCCCGATATGGGTAATGGTCGCA.............. 24 2 2 0.50 1 1 0 0 0 0
...........................................................................TCGATTTTCCCCTATCGATGGTTCGCGG.......................................................... 28 1 2 0.50 1 1 0 0 0 0
...........................................................................................................................TGCCCGATATGGGTAATGGTCGCTATT........... 27 0 2 0.50 1 1 0 0 0 0
.......................................................................................TATCGATGGTTCGCGGAGGAGCCTGTACC............................................. 29 3 2 0.50 1 1 0 0 0 0
.......................................................................................TATCGATGGTTCGCGGAGGAGCCTA................................................. 25 1 2 0.50 1 1 0 0 0 0
.................................................................................TCCCCCTATCGATGGTTCGCGGA......................................................... 23 0 2 0.50 1 1 0 0 0 0
.......................................................................................TATCGATGGTTCGCGGAGGAGCCTCG................................................ 26 1 2 0.50 1 1 0 0 0 0
.......................................................................................TATCGACGGTTCGCGGAGGAG..................................................... 21 1 2 0.50 1 0 0 1 0 0
.............................................TGCCATATCTCTTCAATGC................................................................................................. 19 0 2 0.50 1 1 0 0 0 0
..................................................TATCTCTTGAATGCGTGCGATCGCTT..................................................................................... 26 1 4 0.50 2 2 0 0 0 0
.......................................................................................TATCGATTGTTCGCGGAG........................................................ 18 1 2 0.50 1 1 0 0 0 0
.......................................................................................TATTGATGGTTCGCGGAGGA...................................................... 20 1 2 0.50 1 1 0 0 0 0
.......................................................................................TATCGATGATTCGCGGAGGAGCCT.................................................. 24 1 2 0.50 1 1 0 0 0 0
...................................................ATCTCTTCAATGCTTGCGATCGCTT..................................................................................... 25 1 2 0.50 1 1 0 0 0 0
...................................................ATCTCTTCAATGCGTGCGATCGAT...................................................................................... 24 1 11 0.36 4 4 0 0 0 0
...................................................ATCTCTTCAATGCGTGCGATCGA....................................................................................... 23 1 11 0.36 4 4 0 0 0 0
.......................TCGGTCTTGCGCCTGGCGGTGTT................................................................................................................... 23 0 3 0.33 1 1 0 0 0 0
........................................................................................ATCGATGGTTCGCGGAGGTT..................................................... 20 2 3 0.33 1 1 0 0 0 0
..................................................................................GCACCTATCGACGGTTCGCGG.......................................................... 21 3 3 0.33 1 0 0 0 1 0
...................TCTTTCGGTCTTGCGCCTGGCGGTG..................................................................................................................... 25 0 3 0.33 1 1 0 0 0 0
.......................................................................................TATAGATGGTTAGCGGAGGAGGCT.................................................. 24 3 3 0.33 1 0 0 1 0 0
...................TCTTTCGGTCTTGCGCCTGGCGGTGT.................................................................................................................... 26 0 3 0.33 1 1 0 0 0 0
..................................................TATCTCTTCAATGCGATCGAT.......................................................................................... 21 2 3 0.33 1 1 0 0 0 0
..................................................TATCTCTTCAATGCGTGCGATCGATTC.................................................................................... 27 1 11 0.27 3 3 0 0 0 0
..................................................TATCTCTTGAATGCGTGCGATCGCT...................................................................................... 25 1 4 0.25 1 1 0 0 0 0
.............................................................TGCGTGCGATCGCTTCGATTTCCCC........................................................................... 25 0 4 0.25 1 1 0 0 0 0
.............................................................................................TGGTTCGCGGAGGAGCCTCTG............................................... 21 0 4 0.25 1 1 0 0 0 0
.......................................................................................TATCGATGGTTCGCGGAAA....................................................... 19 2 4 0.25 1 1 0 0 0 0
..................................................TATCTCTTAAATGCGTGCGATTG........................................................................................ 23 2 4 0.25 1 0 0 1 0 0
.............................................................................................TGGTTCGCGGAGGAGCCTCTAAA............................................. 23 3 4 0.25 1 1 0 0 0 0
..................................................TATCTCTTGAATGCGTGCGATCGAT...................................................................................... 25 2 13 0.23 3 3 0 0 0 0
...........................................................................TCGATTTTCCCCTATCGATGGTT............................................................... 23 1 14 0.21 3 3 0 0 0 0
.......................................................................................TATCGATGGTTCGCGGAGGAGCT................................................... 23 1 11 0.18 2 1 1 0 0 0
..........................................................CAATGCGTGCGATCGATTCGATTT............................................................................... 24 1 12 0.17 2 2 0 0 0 0
..........................................................CAATGCGTGCGATCGATTCGATT................................................................................ 23 1 13 0.15 2 2 0 0 0 0
........................................................TTCAATGCGTGCGATCGATTCGATT................................................................................ 25 1 13 0.15 2 2 0 0 0 0
...............................................................................................................................CGATATGGGTAATGGTCGCTATTC.......... 24 0 7 0.14 1 1 0 0 0 0
............................................................................CGATTTTCCCCTATCGATGGTTCGC............................................................ 25 1 14 0.14 2 2 0 0 0 0
............................................................................................................................GCCCGATATGGGTAATGGTCGCT.............. 23 0 7 0.14 1 1 0 0 0 0
............................................................................................................................GCCCGATATGGGTAATGGTCGC............... 22 0 7 0.14 1 1 0 0 0 0
..................................................................................................................................TATGGGTAATGGTCGCTATTCT......... 22 0 7 0.14 1 1 0 0 0 0
....................................................................................................................................TGGGTAATGGTCGCTATTCTGACCT.... 25 0 9 0.11 1 1 0 0 0 0
....................................................................................................................................TGGGTAATGGTCGCTATTCTG........ 21 0 9 0.11 1 1 0 0 0 0
..................................................TATCTCTTCAATGCTTGCGATTGATT..................................................................................... 26 3 11 0.09 1 1 0 0 0 0
..................................................TATCTCTTCAATGCGTGCGATCGAA...................................................................................... 25 2 11 0.09 1 1 0 0 0 0
.......................................................................................TATCGATGGTTCGCGGAGGAGAT................................................... 23 2 11 0.09 1 1 0 0 0 0
..................................................TATCTCTTCAATGCGTGCGATCGATTG.................................................................................... 27 2 11 0.09 1 1 0 0 0 0
....................................................TCTCTTCAATGCGTGCGATCGATT..................................................................................... 24 1 11 0.09 1 1 0 0 0 0
..................................................TATCTCTTCAATGCGTGCGATCGATA..................................................................................... 26 2 11 0.09 1 1 0 0 0 0
...................................................ATCTCTTCAATGCGTGCGATCGATTC.................................................................................... 26 1 11 0.09 1 1 0 0 0 0
..................................................TATCTCTTCAATTCGTGCGATCGA....................................................................................... 24 2 11 0.09 1 1 0 0 0 0
.......................................................................................TATCGATGGTTCGCGGAGGAGTTG.................................................. 24 3 11 0.09 1 1 0 0 0 0
..................................................TATCTCTTCAATGCGTGCGATCGATTT.................................................................................... 27 2 11 0.09 1 1 0 0 0 0
....................................................TCTCTTCAATGCGTGCGATCGATTCGAT................................................................................. 28 1 11 0.09 1 1 0 0 0 0
.......................................................................................TATCGATGGTTCGCGGAGGAGCTT.................................................. 24 1 11 0.09 1 1 0 0 0 0
..................................................TATCTCTTCAATGCGTGCGATCGAC...................................................................................... 25 2 11 0.09 1 0 1 0 0 0
..................................................TATCTCTTCAATGCGTGCGGTCGATT..................................................................................... 26 2 11 0.09 1 1 0 0 0 0
......................................................TCTTCAATGCGTGCGATCGATTCG................................................................................... 24 1 12 0.08 1 1 0 0 0 0
...................TCTTTCGGACTTGCGCCTGGCGGTG..................................................................................................................... 25 1 12 0.08 1 1 0 0 0 0
...................TCTTTCGGGCTTGCGCCTGGCGGTGT.................................................................................................................... 26 1 12 0.08 1 1 0 0 0 0
......................................................TCTTCAATGCGTGCGATCGATT..................................................................................... 22 1 12 0.08 1 1 0 0 0 0
.....................................................CTCTTCAATGCGTGCGATCGATT..................................................................................... 23 1 12 0.08 1 1 0 0 0 0
..................................................TAGCTCTTCAATGCGTGCGATCGATT..................................................................................... 26 2 12 0.08 1 1 0 0 0 0
..........................................................CAATGCGTGCGATCGATTCGATTTTC............................................................................. 26 2 12 0.08 1 1 0 0 0 0
.............................TTGCGCCTGGCGGTGTTG.................................................................................................................. 18 0 13 0.08 1 1 0 0 0 0
..................................................TATCTCTTAAATGCGTGCGATCGAT...................................................................................... 25 2 13 0.08 1 1 0 0 0 0
.........................................................TCAATGCGTGCGATCGATTCGATT................................................................................ 24 1 13 0.08 1 1 0 0 0 0
...................TCTTTCGGACTTGCGCCTGGCA........................................................................................................................ 22 2 13 0.08 1 1 0 0 0 0
..................................................TATCTCTTGAATGCGTGCGATCGA....................................................................................... 24 2 13 0.08 1 1 0 0 0 0
............................................................................CGATTTTCCCCTATCGATGGTTC.............................................................. 23 1 14 0.07 1 1 0 0 0 0
..........................................................................TTCGATTTCCCCCTATCGATGGTTCGC............................................................ 27 0 14 0.07 1 1 0 0 0 0
...........................................................................TCGATTTTCCCCTATCGATGGTTC.............................................................. 24 1 14 0.07 1 1 0 0 0 0
............................................................................CGATTTTCCCCTATCGATG.................................................................. 19 1 15 0.07 1 0 0 1 0 0

Anti-sense strand reads

TGTCCCCAGGGACCGCGGGAGAAAGCCAGAACGCGGACCGCCACAACGGTATAGAGAAGTTACGCACGCTAGCGAAGCTAAAGGGGGATAGCTACCAAGCGCCTCCTCGGAGACAGTCGCGGGACGGGCTATACCCATTACCAGCGATAAGACTGGATGAG
**********************************..((((((((((.((...((((((..((((.((.((((.................)))).)).))))))))))....)).)))))))..)))*********************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V042
embryo
 M021
embryo
 V057
head
......................................CGCCACAACGGTATAGAGAAGT..................................................................................................... 22 0 2 2.50 5 3 1 1 0
..................................GGACCGCCACAACGGTATAGAGAAGT..................................................................................................... 26 0 2 1.50 3 3 0 0 0
.........................................................................GAAGCTAAAGGGGGATAGCTACCA................................................................ 24 0 2 1.00 2 2 0 0 0
..........................................................................AAGCTAAAGGGGGATAGCTACCA................................................................ 23 0 14 0.57 8 8 0 0 0
.......................................GCCACAACGGTATAGAGAAGT..................................................................................................... 21 0 2 0.50 1 1 0 0 0
....................................CCCGCCACAACGGTATAGAGAAGT..................................................................................................... 24 1 2 0.50 1 1 0 0 0
.................................CGGACCGCCACAACGGTATAGAGAAGT..................................................................................................... 27 0 2 0.50 1 1 0 0 0
.................................CGGACCGCCACAACGGTATAGAGAAGG..................................................................................................... 27 1 2 0.50 1 1 0 0 0
.........................................CACAACGGTATAGAGAAGT..................................................................................................... 19 0 2 0.50 1 1 0 0 0
...................................GACCGCCACAACGGTATAGAGAAGT..................................................................................................... 25 0 2 0.50 1 1 0 0 0
.....................................CCGCCACAACGGTATAGAGAAG...................................................................................................... 22 0 2 0.50 1 1 0 0 0
....................................ACCGCCACAACGGTATAGAGAAGT..................................................................................................... 24 0 2 0.50 1 1 0 0 0
.......................................................................GCGAAGCTAAAGGGGGATAGCTACCA................................................................ 26 0 2 0.50 1 1 0 0 0
.........GGACCGCGGGAGAAAGCCAGAAC................................................................................................................................. 23 0 3 0.33 1 1 0 0 0
.....CCAGGGACCGCGGGAGAAAGCCAGAAC................................................................................................................................. 27 0 3 0.33 1 1 0 0 0
...........................................................................AGCTAAAGGGGGATAGCTACCA................................................................ 22 0 14 0.21 3 3 0 0 0
............................................................................GCTAAAGGGGGATAGCTACCA................................................................ 21 0 14 0.14 2 1 1 0 0
..........................................................................AAGCTAAAGGGGGACAGCTACCA................................................................ 23 1 14 0.14 2 2 0 0 0
...................................................................................GGGCATGGCTAGCAAGCGCCT......................................................... 21 3 8 0.13 1 0 0 0 1
...........................................................................TGCTAAAGGGGGATAGCTACCA................................................................ 22 1 14 0.07 1 1 0 0 0
........................................................................AAAAGCTAAAGGGGGATAGCTACCA................................................................ 25 2 14 0.07 1 1 0 0 0
............................................................................GCTAAAAGGGGATAGCTACCA................................................................ 21 1 14 0.07 1 1 0 0 0
..........................................................................AAGCTAAAAGGGGATAGCTACCA................................................................ 23 1 14 0.07 1 1 0 0 0
........................................................................AAAAGCTAAAGGGGGATAGCTACC................................................................. 24 2 14 0.07 1 1 0 0 0
..........................................................................AAGCTAAAGGGGGAGAGCTACCA................................................................ 23 1 14 0.07 1 1 0 0 0
...........................TGAACGCGGACCGCCACACA.................................................................................................................. 20 3 17 0.06 1 0 0 0 1
..............TCGAGAGTAAGCCAGAACG................................................................................................................................ 19 3 20 0.05 1 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_3375:1-161 - dpe_224 ACAGGGGTCCCTGGCGCCCTCTTTCGGTCTTGCGCCTGGCGGTGTTGCCATATCTCTTCAATGCGTGCGATCGCTTCGATTTCCCCCTATCGATGGTTCGCGGAG-GAGCCTCTGTCAGCGCCCTGCCCGATATGGGTAATGGTCGCTATTCTGAC--------------------------------------CTACTC
dp5 Unknown_group_326:17602-17762 + TCTA----------------TCTTACGCTACGCGGATTCCGGCGCTGGT-------------------TCTCCTCCCGACTCTCCTCTG----TGGTCCGATGAGCGCGTTGCTCCCTGGGCCCCCCACGGCGTCGCCAAGCGTGGCACCGCCGGCTCTACTGACTGGGGCTAGCGATTCTTGGCACGGGGCCCAAATCC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
ACAGGGGTCCCTGGCGCCCTCTTTCGGTCTTGCGCCTGGCGGTGTTGCCATATCTCTTCAATGCGTGCGATCGCTTCGATTTCCCCCTATCGATGGTTCGCGGAG-GAGCCTCTGTCAGCGCCCTGCCCGATATGGGTAATGGTCGCTATTCTGAC--------------------------------------CTACTCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................................................TATCGATGGTTCGCGGAG-GAGCCTC.......................................................................................25241.00824770001
.......................................................................................TATCGATGGTTCGCGGAG-GAGC..........................................................................................22232.50655600000
.......................................................................................TATCGATGGTTCGCGGAG-GAG...........................................................................................21230.00605505000
.......................................................................................TATCGATGGTTCGCGGAG-GAGCCT........................................................................................24221.50431402000
.......................................................................................TATCGATGGTTCGCGGAG-GAGCC.........................................................................................23210.00200191000
.......................................................................................TATCGATGGTTCGCGGAG-GAGCCTCTG.....................................................................................2728.50170170000
.......................................................................................TATCGATGGTTCGCGGAG-GA............................................................................................2028.00160151000
.......................................................................................TATCGATGGTTCGCGGAG-G.............................................................................................1925.00100100000
.......................................................................................TATCGATGGTTCGCGGAG-GAGT..........................................................................................2225.0010082000
..................................................TATCTCTTCAATGCGTGCGATCG...............................................................................................................................2323.507070000
.......................................................................................TATCGATGGTTCGCGGAG-..............................................................................................1822.505041000
........................................................................................ATCGATGGTTCGCGGAG-GAGCCTCTG.....................................................................................2622.505050000
.......................................................................................TATCGATGGTTCGCGGAG-GAGCCTCT......................................................................................2622.004040000
..................................................TATCTCTTCAATGCGTGCGATCGCTT............................................................................................................................2622.004040000
............................................................................................................................TGCCCGATATGGGTAATGGTCGCT....................................................2422.004220000
..................................................TATCTCTTCAATGCGTGCGATCGA..............................................................................................................................24111.91211200000
.......................................................................................TATCGATGGTTCGCGGAG-GAA...........................................................................................2121.503030000
........................................................................................ATCGATGGTTCGCGGAG-GAGC..........................................................................................2121.503030000
........................................................................................ATCGATGGTTCGCGGAG-GAG...........................................................................................2021.503030000
.......................................................................................TATCGATGGTTCGCGGAG-GAGA..........................................................................................2221.002020000
.............................................TGCCATATCTCTTCAATGCGTGCGAT.................................................................................................................................2621.002020000
..................................................TATCTCTTCAATGCGTGCGATC................................................................................................................................2221.002020000
......................................................................................CTATCGATGGTTCGCGGAG-GAGC..........................................................................................2321.002020000
.......................................................................................TATCGATGGTTCGCGGAG-A.............................................................................................1921.002110000
.........................................................................................TCGATGGTTCGCGGAG-GAGCCTC.......................................................................................2321.002020000
........................................................................................ATCGATGGTTCGCGGAG-GAGCCTC.......................................................................................2421.002020000
..................................................TATCTCTTCAATGCGTGCGATCGCT.............................................................................................................................2521.002020000
.......................................................................................TATCGATGGTTCGCGGAG-GAAA..........................................................................................2220.501010000
........................................................................................ATCGATGGTTCGCGGAG-GA............................................................................................1920.501010000
........................................................................................ATCGATGGTTCGCGGAG-GAGCCTCT......................................................................................2520.501010000
.............................................TGCCATATCTCTTCAATGCGTGCG...................................................................................................................................2420.501010000
........................................................................................ATCGATGGTTCGCGGAG-GAGCC.........................................................................................2220.501010000
.........................................................................................TCGATGGTTCGCGGAG-GAGCCT........................................................................................2220.501010000
..................................................TATCTCTTCAATGCGTGC....................................................................................................................................1820.501010000
............................................................................................................................TGCCCGATATGGGTAATGGTCGCTATTC................................................2820.501010000
.......................................................................................TATCGATGGTTCGCGGAG-GAGCCTTAA.....................................................................................2720.501010000
........................................................................................ATCGATGGTTCGCGGAG-GAGCCT........................................................................................2320.501010000
......................................................................................CTATCGATGGTTCGCGGAG-GA............................................................................................2120.501010000
.........................................................................................TCGATGGTTCGCGGAG-GAGC..........................................................................................2020.501010000
...................................................ATCTCTTCAATGCGTGCGATC................................................................................................................................2120.501010000
.......................................................................................TATCGATGGTTCGCGGAG-GAC...........................................................................................2120.501010000
............................................................................CGATTTCCCCCTATCGATGGTTCGCGG.................................................................................................2720.501010000
......................................................................................CTATCGATGGTTCGCGGAG-GAA...........................................................................................2220.501010000
........................................................................................ATCGATGGTTCGCGGAG-G.............................................................................................1820.501010000
...........................................................................................GATGGTTCGCGGAG-GAGT..........................................................................................1820.501010000
......................................................................................CTATCGATGGTTCGCGGAG-GAG...........................................................................................2220.501010000
............................................................................................................................TGCCCGATATGGGTAATGGTCGCTAT..................................................2620.501010000
............................................................................................................................TGCCCGATATGGGTAATGGTCGCTATT.................................................2720.501010000
.......................................................................................TATCGATGGTTCGCGGAG-GAGCCTA.......................................................................................2520.501010000
.................................................................................TCCCCCTATCGATGGTTCGCGGA................................................................................................2320.501010000
.......................................................................................TATCGATGGTTCGCGGAG-GAGCCTCG......................................................................................2620.501010000
.............................................TGCCATATCTCTTCAATGC........................................................................................................................................1920.501010000
...................................................ATCTCTTCAATGCGTGCGATCGA..............................................................................................................................23110.364040000
.......................TCGGTCTTGCGCCTGGCGGTGTT..........................................................................................................................................................2330.331010000
........................................................................................ATCGATGGTTCGCGGAG-GTT...........................................................................................2030.331010000
...................TCTTTCGGTCTTGCGCCTGGCGGTG............................................................................................................................................................2530.331010000
...................TCTTTCGGTCTTGCGCCTGGCGGTGT...........................................................................................................................................................2630.331010000
.............................................................TGCGTGCGATCGCTTCGATTTCCCC..................................................................................................................2540.251010000
.............................................................................................TGGTTCGCGGAG-GAGCCTCTG.....................................................................................2140.251010000
.......................................................................................TATCGATGGTTCGCGGAA-A.............................................................................................1940.251010000
.............................................................................................TGGTTCGCGGAG-GAGCCTCTAAA...................................................................................2340.251010000
.......................................................................................TATCGATGGTTCGCGGAG-GAGCT.........................................................................................23110.182110000
................................................................................................................................CGATATGGGTAATGGTCGCTATTC................................................2470.141010000
.............................................................................................................................GCCCGATATGGGTAATGGTCGCT....................................................2370.141010000
.............................................................................................................................GCCCGATATGGGTAATGGTCGC.....................................................2270.141010000
...................................................................................................................................TATGGGTAATGGTCGCTATTCT...............................................2270.141010000
.....................................................................................................................................TGGGTAATGGTCGCTATTCTGAC--------------------------------------CT....2590.111010000
.....................................................................................................................................TGGGTAATGGTCGCTATTCTG..............................................2190.111010000
..................................................TATCTCTTCAATGCGTGCGATCGAA.............................................................................................................................25110.091010000
.......................................................................................TATCGATGGTTCGCGGAG-GAGAT.........................................................................................23110.091010000
.......................................................................................TATCGATGGTTCGCGGAG-GAGTTG........................................................................................24110.091010000
..................................................TATCTCTTCAATGCGTGCGATCGAC.............................................................................................................................25110.091100000
.............................TTGCGCCTGGCGGTGTTG.........................................................................................................................................................18130.081010000
..........................................................................TTCGATTTCCCCCTATCGATGGTTCGC...................................................................................................27140.071010000
dp5
TCTA----------------TCTTACGCTACGCGGATTCCGGCGCTGGT-------------------TCTCCTCCCGACTCTCCTCTG----TGGTCCGATGAGCGCGTTGCTCCCTGGGCCCCCCACGGCGTCGCCAAGCGTGGCACCGCCGGCTCTACTGACTGGGGCTAGCGATTCTTGGCACGGGGCCCAAATCCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................TG----TGGTCCGATGAGCGCGTTGC.......................................................................................229115.4410390864170512713400
.......................................................................................TG----TGGTCCGATGAGCGCGTTGCTCC....................................................................................259105.339480797172270654000
.......................................................................................TG----TGGTCCGATGAGCGCGTTGCTCCC...................................................................................26997.89881083011000251500
.......................................................................................TG----TGGTCCGATGAGCGCGTTG........................................................................................21977.116940664101109900
.......................................................................................TG----TGGTCCGATGAGCGCGTTGCTC.....................................................................................24945.89413027010149276500
.......................................................................................TG----TGGTCCGATGAGCGCGTTGCT......................................................................................23932.00288023350131162000
...........................................................................................................................................................................TAGCGATTCTTGGCACGGGG.........201222.502700238501306800
...........................................................................................................................................................................TAGCGATTCTTGGCACGGG..........191219.3323201727016033040
..TA----------------TCTTACGCTACGCGGATTCCGGC.............................................................................................................................................................25916.6715001092401301300
..TA----------------TCTTACGCTACGCGGATTCCGGCGC...........................................................................................................................................................27915.331380118160100300
.....................................................................................TCTG----TGGTCCGATGAGCGCGTTGC.......................................................................................24914.56131073303124810
...........................................................................................................................................................................TAGCGATTCTTGGCACGGGGC........211214.5017401251305192010
..TA----------------TCTTACGCTACGCGGATTCCGG..............................................................................................................................................................24910.899809310400000
.....................................................................................TCTG----TGGTCCGATGAGCGCGTTG........................................................................................23910.6796081002021100
.....................................................................................TCTG----TGGTCCGATGAGCGCGTTGCTCCC...................................................................................28910.0090066200012010
................................................................................................TCCGATGAGCGCGTTGCTCCCTGG................................................................................24910.009008500400100
...............................................................................................................................................TGGCACCGCCGGCTCTACTGACTG.................................24209.551910156908001800
..TA----------------TCTTACGCTACGCGGATTCCGGCG............................................................................................................................................................2699.448507860000100
...........................................................................................................................................................................TAGCGATTCTTGGCACGGGGCCCAAA...26129.33112091000021900
..................................................................................TCCTCTG----TGGTCCGATGAGCGCGT..........................................................................................2499.3384069002011200
...........................................................................................................................................................................TAGCGATTCTTGGCACGGGGCCCAA....25128.5010209320300400
.....................................................................................................................................TCGCCAAGCGTGGCACCGCCGGC............................................23188.4415201142701100000
...........................................................................................................................................................................TAGCGATTCTTGGCACGGGGCCC......23128.4210109181100000
.....................................................................................................................TGGGCCCCCCACGGCGTCGCCAAG...........................................................24108.408408010200100
...........................................................................................................................................................................TAGCGATTCTTGGCACGGGGCCCA.....24127.589108620000300
....................................................................TCTCCTCCCGACTCTCCTCTG----TGG........................................................................................................2477.575304810100120
.....................................................................................................................................TCGCCAAGCGTGGCACCGCCGG.............................................22186.89124011230900000
................................................................................................TCCGATGAGCGCGTTGCTCCCTG.................................................................................2396.565905810000000
........................................................................................G----TGGTCCGATGAGCGCGTTGCTCCC...................................................................................2596.005405400000000
.....................................................................................TCTG----TGGTCCGATGAGCGCGTTGCTCC....................................................................................2795.8953019300022900
........................................................................................G----TGGTCCGATGAGCGCGTTGC.......................................................................................2195.895305300000000
........................................................................................G----TGGTCCGATGAGCGCGTTG........................................................................................2095.675105100000000
........................................................................................G----TGGTCCGATGAGCGCGTTGCTCC....................................................................................2495.675105100000000
.......................................................................................TG----TGGTCCGATGAGCGCGTTGCTT.....................................................................................24105.405404020601500
.....................................................................................................................TGGGCCCCCCACGGCGTCGCCAAGC..........................................................25105.005003961201100
..........................................................................................................................CCCCCACGGCGTCGCCAAGCGTGGCAC...................................................27144.436205750000000
.......................................................................................TG----TGGTCCGATGAGCGCGTTGCTCCCT..................................................................................2794.333903200004300
...........................................................................................................................................................................TAGCGATTCTTGGCACGGGGCC.......22124.335204450003000
...............................................................................................................................................TGGCACCGCCGGCTCTACTGACT..................................23204.208407570000200
.......................................................................................TG----TGGTCCGATGAGCGCGTTGCTA.....................................................................................2494.003602710500300
...............................................................................................................................................TGGCACCGCCGGCTCTACTGACTGG................................25203.9579056301001810
.............................................................................................TGGTCCGATGAGCGCGTTGCTCCC...................................................................................2493.893503130001000
.......................TACGCTACGCGGATTCCGGCGCTG.........................................................................................................................................................2493.673302600100600
................................................................................................TCCGATGAGCGCGTTGCTCCCTGGG...............................................................................2593.673303300000000
.................................................................................................................................................................TGACTGGGGCTAGCGATTCTTGG................23203.607205910112800
.............................................................................................TGGTCCGATGAGCGCGTTGCTCC....................................................................................2393.443102730001000
.....................................................................................................................TGGGCCCCCCACGGCGTCGCCAAGCG.........................................................26103.403403310000000
.....................................................................................................................................TCGCCAAGCGTGGCACCGCCGGCTC..........................................25173.295605060000000
.....................................TCCGGCGCTGGT-------------------TCTCCTCCCGACTC......................................................................................................................2663.171901900000000
.....................................................................................TCTG----TGGTCCGATGAGCGCGTTGCTC.....................................................................................2693.112801610103700
..................................................................................TCCTCTG----TGGTCCGATGAGCGC............................................................................................2293.002702300000400
...........................................................................................................................................................................TAGCGATTCTTGGCACGG...........18123.003602540500200
.............................................TGGT-------------------TCTCCTCCCGACTCTCCTCTG----...........................................................................................................2563.001801800000000
....................TCTTACGCTACGCGGATTCCGGCGC...........................................................................................................................................................2593.002702600000100
................................................................................................TCCGATGAGCGCGTTGCTCCCTGGGC..............................................................................2693.002702300112000
...........................................................................................................................................................................TAGCGATTCTTGGCACGGGA.........20122.923503030200000
.......................................................................................TG----TGGTCCGATGAGCGCGTT.........................................................................................2092.892602100300200
..TA----------------TCTTACGCTACGCGGATTCCG...............................................................................................................................................................2392.782502310100000
.......................TACGCTACGCGGATTCCGGCGCTGG........................................................................................................................................................2592.782501700100700
.......................................................................................TG----TGGTCCGATGAGCGCGTTGCTTT....................................................................................25102.502502010301000
................................................T-------------------TCTCCTCCCGACTCTCCTCTG----TGG........................................................................................................2562.501501410000000
..................................................................................TCCTCTG----TGGTCCGATGAGCGCG...........................................................................................2392.442201400000800
.......................................................................................TG----TGGTCCGATGAGCGCGTTGT.......................................................................................2292.442202100100000
.........................................................................TCCCGACTCTCCTCTG----TGGTCCGATG.................................................................................................2672.431701300000400
........................................................................................G----TGGTCCGATGAGCGCGTTGCTC.....................................................................................2392.332102000000100
..TA----------------TCTTACGCTACGCGGATTCC................................................................................................................................................................2292.332101920000000
................................................................................TCTCCTCTG----TGGTCCGATGAGCGCGT..........................................................................................2662.331401100000300
.....................................................................................TCTG----TGGTCCGATGAGCGCGTTGCT......................................................................................2592.332106201011100
.....................................TCCGGCGCTGGT-------------------TCTCCTCCCGACT.......................................................................................................................2562.331401400000000
.............................................................................................TGGTCCGATGAGCGCGTTG........................................................................................1992.111901900000000
...............................................................................................................................................TGGCACCGCCGGCTCTACTGACTGGGG..............................27192.0539025000001310
......................................................................TCCTCCCGACTCTCCTCTG----TGGTCC.....................................................................................................2572.001401210100000
...A----------------TCTTACGCTACGCGGATTCCGGCGC...........................................................................................................................................................2691.891701610000000
....................................................................................CTCTG----TGGTCCGATGAGCGCGT..........................................................................................2291.891704100001200
.........................................................................TCCCGACTCTCCTCTG----TGGTCCGA...................................................................................................2471.861301300000000
.................................................................................CTCCTCTG----TGGTCCGATGAGCGCGT..........................................................................................2561.83110710000300
.................................................................................................................................................................TGACTGGGGCTAGCGATTCTTGGCAC.............26201.803603211000200
................................................................................................TCCGATGAGCGCGTTGCTCCCT..................................................................................2291.781601420000000
.................................................................................................................................................................TGACTGGGGCTAGCGATTCTTGGC...............24201.753502740101200
............................................................................................................................................................................AGCGATTCTTGGCACGGGG.........19121.752102100000000
.......................................................................................TG----TGGTCCGATGAGCGCGTTGCAA.....................................................................................2491.671501500000000
.......................TACGCTACGCGGATTCCGGCGC...........................................................................................................................................................2291.671501400000100
................................................................................................TCCGATGAGCGCGTTGCTCCC...................................................................................2191.671501500000000
............................................................................................................................................................................AGCGATTCTTGGCACGGG..........18121.672001700101100
................................................................................TCTCCTCTG----TGGTCCGATGAGC..............................................................................................2261.671001000000000
..............................................................................................................................................................TACTGACTGGGGCTAGCGATTCTTG.................25201.603202700001400
......................................................................TCCTCCCGACTCTCCTCTG----TGG........................................................................................................2271.571101010000000
.......................................................................................TG----TGGTCCGATGAGCGCGT..........................................................................................1991.561401400000000
.......................TACGCTACGCGGATTCCGG..............................................................................................................................................................1991.561401400000000
...........................................................................................................................................................................TAGCGATTCTTGGCACGGGAA........21121.501801710000000
.....................................TCCGGCGCTGGT-------------------TCTCCTCCCGAC........................................................................................................................2461.5090900000000
................................................................................TCTCCTCTG----TGGTCCGATGAGCGC............................................................................................2461.5090600000300
.......................TACGCTACGCGGATTCCGGCG............................................................................................................................................................2191.441301100000200
......................................................................................CTG----TGGTCCGATGAGCGCGTTG........................................................................................2291.441301300000000
......................................................................................CTG----TGGTCCGATGAGCGCGTTGC.......................................................................................2391.441301300000000
...........................................................................................................................................................................TAGCGATTCTTGGCACGGGGCCCAAAT..27121.421701300001300
.................................................................................................................................................................TGACTGGGGCTAGCGATTCTTG.................22201.402802200200400
.................................................................................................................................................................TGACTGGGGCTAGCGATTCTTGGCA..............25201.352702500001100
............................................................................................................................................................................AGCGATTCTTGGCACGGGGCCC......22121.331601400000200
...................................................................................CCTCTG----TGGTCCGATGAGCGCGT..........................................................................................2391.33120700000500
.....................................................................................TCTG----TGGTCCGATGAGCGCGT..........................................................................................2191.331201000000110
........................................................................................G----TGGTCCGATGAGCGCGTTGCT......................................................................................2291.331201200000000
...............................................................................................................................................TGGCACCGCCGGCTCTACTGACTGGG...............................26191.322502000000500
...............................................................................................................................................TGGCACCGCCGGCTCTACTGAC...................................22201.302601760000300
..............................................................................................................................................................TACTGACTGGGGCTAGCGATTCTTGG................26201.302601810101500
......................................................................TCCTCCCGACTCTCCTCTG----TGGTCCGA...................................................................................................2771.2990710000100
...A----------------TCTTACGCTACGCGGATTCCGGC.............................................................................................................................................................2491.221101100000000
.......................................................................................TG----TGGTCCGATGAGCGCGTTGCA......................................................................................2391.22110900000200
.......................................................................................TG----TGGTCCGATGAGCGCGTTGCTCCT...................................................................................2691.22110800102000
.....................................................................................................................TGGGCCCCCCACGGCGTCGCCAAGCGT........................................................27101.201201000001100
............................................................................................................................................................................AGCGATTCTTGGCACGGGGC........20121.171401400000000
.............................................TGGT-------------------TCTCCTCCCGACTCTCCT..................................................................................................................2261.1770610000000
.....................................TCCGGCGCTGGT-------------------TCTCCTCCC...........................................................................................................................2161.1770700000000
................................................T-------------------TCTCCTCCCGACTCTCCTCTG----...........................................................................................................2261.1770200000500
.........................................................................TCCCGACTCTCCTCTG----TGG........................................................................................................1971.1480800000000
......................................................................................CTG----TGGTCCGATGAGCGCGTTGCTCCC...................................................................................2791.111001000000000
..................................................................................TCCTCTG----TGGTCCGATGAGCG.............................................................................................2191.11100700000300
....................TCTTACGCTACGCGGATTCCGGC.............................................................................................................................................................2391.11100900000100
.....................................................................................................................................TCGCCAAGCGTGGCACCGCCGGCT...........................................24181.061901900000000
..............................................................................................................................................................TACTGACTGGGGCTAGCGATTCT...................23201.052101810000200
............................................................................................................................................................................AGCGATTCTTGGCACGGGGCCCA.....23121.001201200000000
................................................................................TCTCCTCTG----TGGTCCGATGAGCG.............................................................................................2361.0060200000400
.....................................TCCGGCGCTGGT-------------------TCTCCTCCCGA.........................................................................................................................2361.0060600000000
...........................................................................................................................................................................TAGCGATTCTTGGCACGGGT.........20121.00120810201000
..TA----------------TCTTACGCTACGCGGATTC.................................................................................................................................................................2191.0090800100000
....................................................................TCTCCTCCCGACTCTCCTCTG----TG.........................................................................................................2371.0070310000300
.............................................................................................TGGTCCGATGAGCGCGTTGCTC.....................................................................................2291.0090720000000
.....................................................................................................................TGGGCCCCCCACGGCGTCGC...............................................................20101.001001000000000
......................................................................................................................................CGCCAAGCGTGGCACCGCCGGC............................................22180.941701510100000
.......................................................................................TG----TGGTCCGATGAGCGCGTTGA.......................................................................................2290.8980800000000
....................................................................................CTCTG----TGGTCCGATGAGCGCGTTGC.......................................................................................2590.8980300000500
.......................................................................................TG----TGGTCCGATGAGCGCGTTGCTCT....................................................................................2590.8980700001000
............................TACGCGGATTCCGGCGCTGGT-------------------TCTCC...............................................................................................................................2680.8870300000400
..............................................................................................................TGCTCCCTGGGCCCCCCACGGCGT..................................................................2480.8870700000000
......................................................................TCCTCCCGACTCTCCTCTG----TGGTC......................................................................................................2470.8660600000000
...............................................................................................................................................TGGCACCGCCGGCTCTACTGACA..................................23200.851701510000100
.................................................................................CTCCTCTG----TGGTCCGATGAGCGC............................................................................................2360.8350400000100
.................................................................................................................TCCCTGGGCCCCCCACGGCGTCGCCA.............................................................26100.8080600000200
..............................................................................................................................................................TACTGACTGGGGCTAGCGATT.....................21200.801601400000200
.................................................................................................................................................................TGACTGGGGCTAGCGATTCTTGGCACG............27200.801601300000300
.....................................................................................................................TGGGCCCCCCACGGCGTCGCC..............................................................21100.8080800000000
......................TTACGCTACGCGGATTCCGGCGC...........................................................................................................................................................2390.7870700000000
.....................................................................................TCTG----TGGTCCGATGAGCGCGTT.........................................................................................2290.7870500100100
......................................................................................................................................CGCCAAGCGTGGCACCGCCGG.............................................21180.781401000000130
..................................................................................TCCTCTG----TGGTCCGATGAGC..............................................................................................2090.7870700000000
.............................................................................................TGGTCCGATGAGCGCGTTGCTA.....................................................................................2290.7870700000000
..................................................................................TCCTCTG----TGGTCCGATGAGCGCGTTG........................................................................................2690.7870700000000
.......................................................................................TG----TGGTCCGATGAGCGCGTTGCTCCCTT.................................................................................2890.7870700000000
................................................................................................TCCGATGAGCGCGTTGCTA.....................................................................................1990.7870700000000
.......................TACGCTACGCGGATTCCGGC.............................................................................................................................................................2090.7870500001100
................................................................................................TCCGATGAGCGCGTTGCTCC....................................................................................2090.7870700000000
..TA----------------TCTTACGCTACGCGGATTCCGGT.............................................................................................................................................................2590.7870700000000
......................TTACGCTACGCGGATTCCGGCGCTG.........................................................................................................................................................2590.7870700000000
............................................................................................................................................................................AGCGATTCTTGGCACGGGGCCCAAA...25120.7590900000000
..............................................................................................................TGCTCCCTGGGCCCCCCACGG.....................................................................2180.7560600000000
..............................................................................................................TGCTCCCTGGGCCCCCCACGGCG...................................................................2380.7560600000000
....................................................................TCTCCTCCCGACTCTCCTCTG----...........................................................................................................2170.7150500000000
.....................................................................CTCCTCCCGACTCTCCTCTG----TGG........................................................................................................2370.7150500000000
..........................................................................................................................CCCCCACGGCGTCGCCAAGCGTGGCACC..................................................28140.711001000000000
.......................................................................................TG----TGGTCCGATGAGCGCGTTGCTCCCTG.................................................................................2890.6760600000000
......................................CCGGCGCTGGT-------------------TCTCCTCCCGACTC......................................................................................................................2560.6740400000000
......................................................................................CTG----TGGTCCGATGAGCGCGTTGCTCC....................................................................................2690.6760500000100
..TA----------------TCTTACGCTACGCGGATT..................................................................................................................................................................2090.6760600000000
................................................T-------------------TCTCCTCCCGACTCTCCTCTG----TG.........................................................................................................2460.6740200000020
...A----------------TCTTACGCTACGCGGATTCCGG..............................................................................................................................................................2390.6760600000000
.....................................................................................................................................TCGCCAAGCGTGGCACCGCCG..............................................21180.671201110000000
..................................................................................TCCTCTG----TGGTCCGATGAGCGCGTT.........................................................................................2590.6760500000100
...A----------------TCTTACGCTACGCGGATTCCGGCG............................................................................................................................................................2590.6760600000000
.....................................................................................TCTG----TGGTCCGATGAGCGC............................................................................................1990.6761500000000
.................................................................................................CCGATGAGCGCGTTGCTCCCTGG................................................................................2390.6760600000000
....................TCTTACGCTACGCGGATTCCGG..............................................................................................................................................................2290.6760600000000
..............................................................................................................................................................TACTGACTGGGGCTAGCGATTCTT..................24200.65130410100700
..............................................................................................................................................................TACTGACTGGGGCTAGCGATTC....................22200.651301300000000
..........................................................................................................................CCCCCACGGCGTCGCCAAGCGTGG......................................................24140.6490900000000
............................TACGCGGATTCCGGCGCTGGT-------------------TCTC................................................................................................................................2580.6350000000410
.........................................................................................................................CCCCCCACGGCGTCGCCAAGCGTGGCAC...................................................28130.6280620000000
..............................................................................................................................................................TACTGACTGGGGCTAGCGATTCTTGGC...............27200.60120700000500
..................................................................................................................................................................GACTGGGGCTAGCGATTCTTGG................22200.601201000000020
...........................................................................................................................................................................TAGCGATTCTTGGCACGGGGCCCAAATC.28120.5870700000000
..........................................................................................................................CCCCCACGGCGTCGCCAAGCGTGGCA....................................................26140.5780710000000
........................................................................CTCCCGACTCTCCTCTG----TGG........................................................................................................2070.5740400000000
........................................................................CTCCCGACTCTCCTCTG----TGGTCC.....................................................................................................2370.5740300100000
.........................................................................TCCCGACTCTCCTCTG----TGGT.......................................................................................................2070.5740300000100
..TA----------------TCTTACGCTACGCGGATTCCGGCA............................................................................................................................................................2690.5650500000000
..............................................................................................GGTCCGATGAGCGCGTTGCTCCC...................................................................................2390.5650500000000
.................................................................................................CCGATGAGCGCGTTGCTCCCTG.................................................................................2290.5650500000000
............................TACGCGGATTCCGGCGCTGG........................................................................................................................................................2090.5650400000100
.......................................................................................TG----TGGTCCGATGAGCGCGTTAA.......................................................................................2290.5650500000000
....................TCTTACGCTACGCGGATTCCGGCG............................................................................................................................................................2490.5650500000000
...............................................................................................................................................TGGCACCGCCGGCTCTACTG.....................................20200.55110900200000
..................................................................................................................................................................GACTGGGGCTAGCGATTCTTGGCA..............24200.551101000100000
...............................................................................................................................................TGGCACCGCCGGCTCTACTGACTGGGGC.............................28190.531001000000000
....................................TTCCGGCGCTGGT-------------------TCTCCTCCCGACT.......................................................................................................................2660.5030300000000
..................................................................................................................................................CACCGCCGGCTCTACTGACTGG................................22200.50100900000100
.....................................TCCGGCGCTGGT-------------------TCTCCTCC............................................................................................................................2060.5030300000000
...............................................................................CTCTCCTCTG----TGGTCCGATGAGC..............................................................................................2360.5030100000200
............................TACGCGGATTCCGGCGCTGGT-------------------TCT.................................................................................................................................2480.5040110000200
..........................................................................................................................................................................CTAGCGATTCTTGGCACGGGGC........22120.5060410000100
.................................................................................................................TCCCTGGGCCCCCCACGGCGTCGC...............................................................24100.5050500000000
.................................................................................................................TCCCTGGGCCCCCCACGGC....................................................................19100.5050500000000
..............................................................................................................TGCTCCCTGGGCCCCCCACG......................................................................2080.5040400000000
.....................................................................................................................................................................TGGGGCTAGCGATTCTTGGCACGG...........24120.5060600000000
......................................................................................................................GGGCCCCCCACGGCGTCGCCAAGCG.........................................................25100.5050500000000
.....................................................................................................................................................................TGGGGCTAGCGATTCTTGGCACG............23200.50100900100000
....................................TTCCGGCGCTGGT-------------------TCTCCTCCCG..........................................................................................................................2360.5030300000000
.....................................................................................................................TGGGCCCCCCACGGCGTCGCCAA............................................................23100.5050500000000
............................................................................................................................................................................AGCGATTCTTGGCACGGGGCCCAA....24120.5060600000000
.....................................................................................................................................................................TGGGGCTAGCGATTCTTGGCAC.............22200.50100800000200
.............................................TGGT-------------------TCTCCTCCCGACTCTCCTCT................................................................................................................2460.5030300000000
...........................................................................................................................................................................TAGCGATTCTTGGCACGGGGCCCAAAA..27120.5060500000100
....................................TTCCGGCGCTGGT-------------------TCTCCTC.............................................................................................................................2060.5030200000100
..........................................................................................................................................................................CTAGCGATTCTTGGCACGGGG.........21120.5060600000000
.....................................................................................................................................TCGCCAAGCGTGGCACCGCCGGCTCT.........................................26170.4780800000000
..................................................................................................................................................................GACTGGGGCTAGCGATTCTTGGCAC.............25200.4590720000000
...............................................................................................................................................TGGCACCGCCGGCTCTACTGACTGT................................25200.4590700000200
.................................................................................................................................................................TGACTGGGGCTAGCGATTCT...................20200.4590600000300
....................................................................................CTCTG----TGGTCCGATGAGCGCGTTGCTCC....................................................................................2890.4440200000200
..................................................................................TCCTCTG----TGGTCCGATGAG...............................................................................................1990.4440400000000
.......................................................................................TG----TGGTCCGATGAGCGCGTTGCC......................................................................................2390.4440030001000
.................................................................................................CCGATGAGCGCGTTGCTCCCTGGGC..............................................................................2590.4440400000000
.......................................................................................TG----TGGTCCGATGAGCGCGTTGCTAA....................................................................................2590.4440400000000
.......................TACGCTACGCGGATTCCGGCGCT..........................................................................................................................................................2390.4440200000200
.......................................................................................TG----TGGTCCGATGAGCGCGTTGCTCCCA..................................................................................2790.4440400000000
......................TTACGCTACGCGGATTCCGGCGCT..........................................................................................................................................................2490.4440400000000
....................................................................................CTCTG----TGGTCCGATGAGCGCGTTGCTCCC...................................................................................2990.4440200000200
................................................................................................TCCGATGAGCGCGTTGCTCCCTGGGCCC............................................................................2890.4440310000000
......................................................................................CTG----TGGTCCGATGAGCGCGTTGCTC.....................................................................................2590.4440300100000
.............................................................................................TGGTCCGATGAGCGCGTTGC.......................................................................................2090.4440400000000
.......................................................................................TG----TGGTCCGATGAGCGCGTTGCAAA....................................................................................2590.4440400000000
......................................................................TCCTCCCGACTCTCCTCTG----TGGT.......................................................................................................2370.4330300000000
........................................................................CTCCCGACTCTCCTCTG----TGGTCCGA...................................................................................................2570.4330300000000
...........................................................................................................................CCCCACGGCGTCGCCAAGCGTGGCAC...................................................26140.4360600000000
.........................................................................TCCCGACTCTCCTCTG----TGGTCCG....................................................................................................2370.4330300000000
.........................................................................TCCCGACTCTCCTCTG----TGGTCC.....................................................................................................2270.4330300000000
..........................................................................CCCGACTCTCCTCTG----TGGTCCGATG.................................................................................................2570.4330200000100
......................................................................TCCTCCCGACTCTCCTCTG----TG.........................................................................................................2170.4330300000000
.....................................................................................................................................................................TGGGGCTAGCGATTCTTGGCACGGGG.........26120.4250500000000
...........................................................................................................................................................................TAGCGATTCTTGGCACGGGGA........21120.4250400100000
...........................................................................................................................................................................TAGCGATTCTTGGCACGGGAAA.......22120.4250500000000
............................................................................................................................................................................AGCGATTCTTGGCACGGGGCC.......21120.4250500000000
............................................................................................................................................................................AGCGATTCTTGGCACGGGA.........19120.4250500000000
............................................................................................................................................................................AGCGATTCTTGGCACGGGGCCCAAATC.27120.4250500000000
...........................................................................................................................................................................TAGCGATTCTTGGCACGGGGCCCT.....24120.4250500000000
......................................................................................................................................CGCCAAGCGTGGCACCGCCGGCTC..........................................24170.4170610000000
...............................................................................................................................................TGGCACCGCCGGCTCTACTGA....................................21200.4080510000200
..................................................................................................................................................CACCGCCGGCTCTACTGACTG.................................21200.4080800000000
................................................................................................................................................GGCACCGCCGGCTCTACTGACTG.................................23200.4080800000000
............................................................................................................................................................TCTACTGACTGGGGCTAGCGATTCT...................25200.4080600000110
..........................................................................................................................CCCCCACGGCGTCGCCAAGCGTG.......................................................23150.4060500010000
.................................................................................................................TCCCTGGGCCCCCCACGGCGTCG................................................................23100.4040400000000
..................................................................................................................CCCTGGGCCCCCCACGGCGTCGC...............................................................23100.4040400000000
..................................................................................................................................................CACCGCCGGCTCTACTGACTGGGGC.............................25200.4080520100000
....................................................................TCTCCTCCCGACTCTCCTC.................................................................................................................1980.3830300000000
..............................................................................................................TGCTCCCTGGGCCCCCCACGGCGTCG................................................................2680.3830300000000

Generated: 05/15/2015 at 02:55 PM