ID:

dpe_2205

 Coordinate:

scaffold_99:76933-77083 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-34.6 -34.4

Flybase annnotation

CDS [Dper\GL21302-cds]; exon [dper_GLEANR_3233:3]; intron [Dper\GL21302-in]

Repeatable elements

NameClassFamilyStrand
(CGA)nSimple_repeatSimple_repeat+

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TGCGCTCGACCGAGGACGAGGACGAGGACGGGGACGACGACAGTGCCCAGGACAGTGGGCCGACCACGCGGCTCCTGTACTCCAAGACCCTGCTGGACAGCCTGCAGCACTCGGGGAAGGCCTCACGGCCCGAGCAGCCGCTCAACGATCGCAACTTTGAGCGGAACGAGGCCAGCGCCCTGCGGCGGGAGAGCAACGGCCACAATGACAACGACCAAGACGACGACGATGACGACGAGTACGACGATGAC
*************************************************************.........((((.....((((.((...((((.((....)).))))..)).))))..((((....)))).))))..((((((((...........)))))))).************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M021
embryo
 M042
female body
 V042
embryo
 V111
male body		 V050
head
.............................................................GACCACGCGGCTCCTGTA............................................................................................................................................................................ 18 0 1 3.00 3 3 0 0 0 0
..............................................................................................................................................CAACGATCGCAACTTTGAGCGGA...................................................................................... 23 0 1 3.00 3 3 0 0 0 0
....................................................................................................................................................................................................................GACCAAGACGACGACGATGACGACGA............. 26 0 1 3.00 3 2 0 1 0 0
...............................................................................CTCCAAGACCCTGCTGGACAGCC..................................................................................................................................................... 23 0 1 2.00 2 2 0 0 0 0
...........................................................................................................................................................................................................AATGACAACGACCAAGACGA............................ 20 0 1 2.00 2 2 0 0 0 0
.....................................................................................GACCCTGCTGGACAGCCTGCA................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0
......CGACCGAGGACGAGGACGAGGACGGGGG......................................................................................................................................................................................................................... 28 1 1 1.00 1 1 0 0 0 0
............................................................CGACCACGCGGCTCCTGTACTCCC....................................................................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0
............................................................CGACCACGCGGCTCCTGTACTCCA....................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
...................................GACGACAGTGCCCAGGACA..................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0
......CGACCGAGGACGAGGACGAGGACGGGGA......................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
............................................................................GTACTCCAAGACCCTGCTGGACA........................................................................................................................................................ 23 0 1 1.00 1 0 1 0 0 0
...............................................................................CTCCAAGACCCTGCTGGACAGCCTGC.................................................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0
..............GACGAGGACGAGGACGGGGA......................................................................................................................................................................................................................... 20 0 3 0.33 1 0 0 0 1 0
........ACCGAGGACGAGGACGTCGACG............................................................................................................................................................................................................................. 22 2 6 0.17 1 0 0 0 1 0
.................GAGGACGAGGACGGGGAC........................................................................................................................................................................................................................ 18 0 6 0.17 1 0 0 0 1 0
..................................................................................CAAGACCCTGCTCGGCAGCCA.................................................................................................................................................... 21 3 12 0.08 1 0 0 0 0 1
...............................................................................................................................................................AGCGGACCGGAGCCAGCGCC........................................................................ 20 3 20 0.05 1 0 0 0 0 1
...........GAGGACGAGGACGAGGAC.............................................................................................................................................................................................................................. 18 0 20 0.05 1 1 0 0 0 0

Anti-sense strand reads

ACGCGAGCTGGCTCCTGCTCCTGCTCCTGCCCCTGCTGCTGTCACGGGTCCTGTCACCCGGCTGGTGCGCCGAGGACATGAGGTTCTGGGACGACCTGTCGGACGTCGTGAGCCCCTTCCGGAGTGCCGGGCTCGTCGGCGAGTTGCTAGCGTTGAAACTCGCCTTGCTCCGGTCGCGGGACGCCGCCCTCTCGTTGCCGGTGTTACTGTTGCTGGTTCTGCTGCTGCTACTGCTGCTCATGCTGCTACTG
**************************************************************************************.........((((.....((((.((...((((.((....)).))))..)).))))..((((....)))).))))..((((((((...........)))))))).************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V050
head
 V057
head
.......................................................................................GGGACGACCTGTCCGCCGTC................................................................................................................................................ 20 2 1 1.00 1 1 0 0
.............................................GGGTACTGTCATCAGGCTGGT......................................................................................................................................................................................... 21 3 1 1.00 1 0 1 0
.........................................................................................................................GAGTGCTGGGCTCGACGGCT.............................................................................................................. 20 3 7 0.14 1 0 0 1
................................................................................................................................................................................................................GTTGCTGGTTCCGCTGCTA........................ 19 2 7 0.14 1 0 0 1
...........................................................................................................................................CGGGTTGCTACCGTTGCAAC............................................................................................ 20 3 20 0.10 2 2 0 0
....................................................................................................................................................................TTGCTCCGTTCGCGGGACGGT.................................................................. 21 3 11 0.09 1 0 0 1
..........................................................................................................................................................................................CCCCCTCGCTGCCGGTGT............................................... 18 2 12 0.08 1 0 0 1
....................................................................................................................TTCCGGAGTGATGGGCTT..................................................................................................................... 18 3 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_99:76883-77133 + dpe_2205 TGCGCTCGACC---GAGGACGAGGACGAGGACG---GGGACGAC---------GACAG---TGC--CCAGGA-------------CAG-TGGGCCGACCACGCGGCTCCTGTACTCCAAGACCC---TGCTGGACAGCCTGCAGCACTCGGGGAAGGCCTCACGG---CCCGAGCAGCCGCTCAACGATCGCAACTTTGAG---CGGAACGAGGCCAGCGCCCTGCGGCGGG--------------------------------------------------------------AGA----GCAACGGC---CACAATGACAACGACCAAGACGA---------CGACGATGACGACGA------GTACGACGA------TGAC
dp5 3:12469634-12469884 - TGCGCTCGACC---GAGGACGAGGACGAGGACG---GGGACGAC---------GACAG---TGC--CCAGGA-------------GAG-TGGTCCGACCACGCGGCTCCTATACTCCAAGACCC---TGCTGGACAGCCTGCAGCACTCGGGGAAGGCCTCACGG---CCCGAGCAGCCGCTCAACGATCGCAACTTTGAG---CGGAACGAGGCCAGCGCCCTGCGGCGGG--------------------------------------------------------------AGA----GCAACGGC---CACAATGACAACGACCAAGACGA---------CGACGATGACGACGA------GTACGACGA------TGAC
droWil2 scf2_1100000004590:1770237-1770358 - CGAACAGCTGA------GCT-------------------------------------------------------------------------GCGGCTGCGGCTGC-----------------------------------------------------------------------------------------CCAACAAAGCCCAAGCACAAAGCGCCGTGACGACG----------------------------------------------------------------------GCGACAGC---GACAGCGACGGCGGCGGAGACGA---------TGACGATGACGATGG------CTACAACGA------CGAC
droVir3 scaffold_12875:17085640-17085845 + GCTACTTG---------GACATGGACAGCGACG---ACTACGAC---------AACTA---TGC--GGACGA-------------G-------AAGTCCGCGGAGAC----------------GGCGGCCCG--------GCGCCAATTGCGAAAATTCGCGAGACCCGGCGAGCAGCCGCTCAACGATCGCAACTTTGAGGC---GGGCGAGATCAGTGTGCTGCGCCGCC--------------------------------------------------------------AGA----ACGG------------------AGGCGGAGACAT---------TGACGACGACGACGA------AGACGACGA------TGAC
droMoj3 scaffold_6500:16917304-16917534 + GGC-----------------GACGACAGCGACG---GAAACGTC---------GACTG---AGC--AACCAATAAATTCCACAGACAATCAAACAAACCAAGAAGCT----------------C---TGCCGGCCTCTCTGGCGCTCTCTGAGA----------------------------------------------------------------------------CGCAAGTACCCAAAGCACTCGAAACAGTCAGCGAATGCAAAACAGAAGAGCAAACGGCTGCAGCAGAAGCAGCAACAAC---AACAACAACAGCGACGTCAACGA---------CGACGACGACGACGA------CGACGTCAA------CGAC
droGri2 scaffold_15245:16617537-16617731 + GACT--------------ACTATGACAACTATG--------------------------------GGGAGGA-------------C-------AGGTCCGAGGAGAC----------------C---GTCCG--------TCGCAATTTACGCAAATTTGCACGACCCGTCGAGCAGCCATTAAATGATCGCATCTTTGAG---CCGATTGAGATCAGTGCACTGCGACGCC--------------------------------------------------------------AGA----GCAATGAC---GAGAATGA---CAACGATGACGA---------TGACGAAGACGCAGA------CAATGACTA------TAAC
droAna3 scaffold_13266:13044238-13044419 + TCCTC---------------GACGACCTTGAGG---TCGAGGAC---------GATGA---CTCCAGTACGA-------------T-------ACGACTAAAGATAC----------------C---C----------------------------------------CTCGAACACCCTCTAAACGACCGTATGTTCGACATGCTGAACGAGGCGAGTGCCCTGCGGAAGG--------------------------------------------------------------GAT----TGGACAGCTCCAAGAG------CTACGAGGACGA---------GGACGACGACAACGA------CTATGACGA------TGAC
droBip1 scf7180000396730:882978-883156 - TCCTC---------------------GACGACC---TTGAGGAC---------GATGACGACTCCAGTACGA-------------T-------ACGACTCAAGATAC----------------C---C----------------------------------------CTCGAACACCCACTGAACGATCGAGTGTTCGATATGCTGAACGAGGCGAGTGCCCTGCGGAAGG--------------------------------------------------------------GGC----TGGACGCCTCCAAGAG------CTACGAGGACGA---------TGACGGCGACTATGA------CGATGACGA------TGAC
droKik1 scf7180000302476:1192934-1193127 + TCCGCTTTTCAAACGAAGACGATGACGATGACC---TGGACAACGACGACGACGACGA---TTCTAGTACGA-------------C-------TCGCATAAGGAT--------------------------------------------------------------------GCAACCGCTCAACGATCGCCGGTTTGAGATTATGAACGCAGCGAGTGCTCTGAGGAAGG--------------------------------------------------------------AGA----GT------GCCCAGAG------TTACGAGGACGATGA------CGACAATGACGATAA------CTATGACGA------TGAC
droFic1 scf7180000454066:850409-850626 - TTCGCTTTTCG------GGTGAAGACGATGACT---TGGACGAG------GAGGACGA---CTCCAGTACGA-------------C-------ACGACTTAGGTTGC----------------C---GAATG-------------------GAAAGCTTCCCAAA---TTCGAGCAACCTTTGAACGATCGCATGTTCAACATTCTGAACACAGCAAGTGCTTTGCCACTCG--------------------------------------------------------------AAA----ATCA---ATCCAAGAG------TTACGAGGACGACGACGACTATGACGACGATGACGA------TAACGACGA------TCCG
droEle1 scf7180000491201:258059-258270 + CACGCTTTACGGACGCGGACGAGGACGATGAAT---TGGACGAA---------GATGA---CTCCGGCACGA-------------C-------ACGACTGCGGATTC----------------C---AAACG-------------------GAAAGCTTCCCAAA---TTCGAGCAACCGCTCAACGATCGCATGTTCAATATCCTAAACACGGCAAGTGCTCTGCCGCTGG--------------------------------------------------------------AGA----ACCA---ATCCAAGAA------CTACGAGGACGA---------CGACGATGACTATGA------CGATGACGA------GGAC
droRho1 scf7180000776809:41340-41551 - CCCGCTTTTCG------GACGAGGACGATGACC---TGGACGAA---------GACGA---TTCGGGTACGA-------------C-------ACGACTGAGGATTC----------------C---TTCTG-------------------GAAAGCTTCCCAGG---TTCGAGAAACCGCTCAACGATCGCATGTTTAATATACTAAATACGGCAAGTGCCCTGCCGCTCG--------------------------------------------------------------AGA----ATCA---ATCCAAGAA------CTACGAGGACGA---------------AGACGATGACTATGACGATGACGAAGACGATCCA
droBia1 scf7180000302291:1596112-1596305 - TTCCCTTTCCG------GACGAGGACGATGACC---TAGACGAG---------GAGGA---CGCGGGTACGA-------------C-------ACGACTTAAGATTC----------------C---TTCCG-------------------GAAAGGTTTCCCAG---TTCGAGCAACCGCTCAACGATCGCAGGTTCAATATTCTCAAGTCG------GCTCTGCCGCTGG--------------------------------------------------------------ACA----GTCA---GTCAAAGAG------TTACGAGGACGA---------------CGACGAGGA------CTATGACGA------AGAC
droTak1 scf7180000415762:717501-717709 - TACCCTTTCCG------GACGAGGACCTTGACGACCTTGACGAC------CCAGAGGA---CGCCAGTACGA-------------C-------GCGACTGAGGATTC----------------C---AGCCG-------------------GAAAGCTTCCCCAC---TTTGAGCAACCGCTCAACGATCGCCGGTTCAATATTCTCAACTCGGCGAGCGTTCTGCCGCTGG--------------------------------------------------------------AGA----GCCA---ATCGAAGAG------TTACGAGGACGA------------CGACGACGACGA------CTATGACGA------TGAC
droEug1 scf7180000409672:4185561-4185772 - TAGCCTTTCCG------GACGAGGACGATGACC---TGGACGAA---------GAAGAAGCTCCGCTTACAA-------------C-------GCGTCTAAGGATTC----------------C---TTCCG-------------------GAAAACTACCCAAG---TTCGAACAGCCACTCAACGATCGTAGATTCAATATCCTAAACTCGGGTAGTGTCCT------TG--------------------------------------------------------------AGA----ATCA---ATCGAAGAG------TTACGAGGACGAGAATGACGAGGACGATGACGATGA------CTATGACGA------TAAT
dm3 chr2R:8446049-8446248 + TTCCCTTTCCG------GACGAGGACGATGACC---TAGACGAC---------AATGA---CAGCGGTACGA-------------C-------TCGACTAAGGATCC----------------C---ATCCG-------------------GAAAGCTTCCCAAA---TTTGAGCAACCGCTCAACGACCGCAGATTCAATATCCTAAACGCGGGAAGTGCTTTGCCGCTGG--------------------------------------------------------------ACA----ACCA---ATCGAAGAG------TTACGAGGACGA---------------TGACGACGA------CTATGACGA------GGAC
droSim2 2r:9154909-9155108 + TTCCCTTTCCG------GACGAGGACGATGACC---TAGACGAC---------AATGA---CGCCGGTACGA-------------C-------ACGACTAAGGATCC----------------C---ATCTG-------------------GAAAGCTTCCCAAA---TTTGAGCAACCGCTCAACGACCGCAGATTCAATATACTGAACGCGGGTAGTGCTTTGCCGCTGG--------------------------------------------------------------AGA----ACCA---ATCGAAGAG------TTACGAGGACGA---------------TGACGACGA------CTATGACGA------GGAC
droSec2 scaffold_1:5992528-5992733 + TTCCCTTTCCG------GACGAGGACGATGACC---TAGACGAC---------AGTGA---CGCCGGTACGA-------------C-------ACGACTAAGGATCC----------------C---ATCCG-------------------GAAAGCTTCTCAAA---TTTGAGCAACCGCTCAACGACCGCAGATTCAATATCCTGAACGCGGGTAGTGCTTTGCCGCTGG--------------------------------------------------------------AAA----ACCA---ATCGAAGAG------TTACGAGGACGA---------TGACGATGACGACGA------CTATGACGA------GGAC
droYak3 2R:8497675-8497874 - TTCCTTTTCCG------GACGAGGACGATGACC---TAGACGAC---------GATGA---CGATGGTACGA-------------C-------ACGACTACGGATGC----------------C---TTCCG-------------------GAAAGCTTCCCAAA---TTTGAGCAACCGCTCAACGACCGCAGATTCAATATACTAAACGCGGGGAGTGCTTTGCCGCTGG--------------------------------------------------------------AGA----ACCA---GTCCAAAAG------TTACGAGGACGA---------------CGACGACGA------CTATGACGA------AGAC
droEre2 scaffold_4845:17352402-17352601 - TTCCCTTTTCG------GACGAGGACGATGACC---TAGACGAC---------GATGA---CGCTGGTACGA-------------C-------ACGACTAAGGATCC----------------C---TTCCG-------------------GAAAGCTTCCCAAA---TTTGAGCAACCGCTCAACGACCGCAGATTCAATATCCTAAACGCGGGGAGTGCTCTGCCGCTGG--------------------------------------------------------------AGA----ACCA---ATCCAAGAG------TTACGAGGACGA---------------TGACGATGA------CTACGACGA------GGAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
TGCGCTCGACC---GAGGACGAGGACGAGGACG---GGGACGAC---------GACAG---TGC--CCAGGA-------------CAG-TGGGCCGACCACGCGGCTCCTGTACTCCAAGACCC---TGCTGGACAGCCTGCAGCACTCGGGGAAGGCCTCACGG---CCCGAGCAGCCGCTCAACGATCGCAACTTTGAG---CGGAACGAGGCCAGCGCCCTGCGGCGGG--------------------------------------------------------------AGA----GCAACGGC---CACAATGACAACGACCAAGACGA---------CGACGATGACGACGA------GTACGACGA------TGACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................................................................................GACCACGCGGCTCCTGTA...............................................................................................................................................................................................................................................................................1813.003300000
......................................................................................................................................................................................CAACGATCGCAACTTTGAG---CGGA................................................................................................................................................................................2313.003300000
....................................................................................................................................................................................................................................................................................................................................GACCAAGACGA---------CGACGATGACGACGA------...................2613.003201000
.................................................................................................................CTCCAAGACCC---TGCTGGACAGCC.....................................................................................................................................................................................................................................................2312.002200000
...........................................................................................................................................................................................................................................................................................................................AATGACAACGACCAAGACGA---------........................................2012.002200000
.......................................................................................................................GACCC---TGCTGGACAGCCTGCA.................................................................................................................................................................................................................................................2111.001010000
......CGACC---GAGGACGAGGACGAGGACG---GGGG........................................................................................................................................................................................................................................................................................................................................................2811.001100000
..............................................................................................CGACCACGCGGCTCCTGTACTCCC..........................................................................................................................................................................................................................................................................2411.001100000
..............................................................................................CGACCACGCGGCTCCTGTACTCCA..........................................................................................................................................................................................................................................................................2411.001100000
.........................................GAC---------GACAG---TGC--CCAGGA-------------CA.........................................................................................................................................................................................................................................................................................................1911.001010000
......CGACC---GAGGACGAGGACGAGGACG---GGGA........................................................................................................................................................................................................................................................................................................................................................2811.001100000
..............................................................................................................GTACTCCAAGACCC---TGCTGGACA........................................................................................................................................................................................................................................................2311.001010000
.................................................................................................................CTCCAAGACCC---TGCTGGACAGCCTGC..................................................................................................................................................................................................................................................2611.001010000
.................GACGAGGACGAGGACG---GGGA........................................................................................................................................................................................................................................................................................................................................................2030.331000001
....................GAGGACGAGGACG---GGGAC.......................................................................................................................................................................................................................................................................................................................................................1860.171000001
..............GAGGACGAGGACGAGGAC................................................................................................................................................................................................................................................................................................................................................................18200.051100000
dp5
TGCGCTCGACC---GAGGACGAGGACGAGGACG---GGGACGAC---------GACAG---TGC--CCAGGA-------------GAG-TGGTCCGACCACGCGGCTCCTATACTCCAAGACCC---TGCTGGACAGCCTGCAGCACTCGGGGAAGGCCTCACGG---CCCGAGCAGCCGCTCAACGATCGCAACTTTGAG---CGGAACGAGGCCAGCGCCCTGCGGCGGG--------------------------------------------------------------AGA----GCAACGGC---CACAATGACAACGACCAAGACGA---------CGACGATGACGACGA------GTACGACGA------TGACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................................................................................................................AACGATCGCAACTTTGAG---C...................................................................................................................................................................................1914.0040100000003
........................................CGAC---------GACAG---TGC--CCAGGA-------------GAG-T......................................................................................................................................................................................................................................................................................................2213.0030000000003
..........................GAGGACG---GGGACGAC---------GACAG---TGC--CCA...........................................................................................................................................................................................................................................................................................................................2611.0010100000000
...........................................................................................................................................................................................................................................................................................................................................ACGA---------CGACGATGACGACGA------GTACGAC............2611.0010100000000
.....................................................................................................................................................................................TCAACGATCGCAACTTTGAG---C...................................................................................................................................................................................2111.0010000000001
..............................................................................................................................................................CTCACGG---CCCGAGCAGCCGCTCAAC......................................................................................................................................................................................................2511.0010100000000
.............................................................................................................................................................................................................GGAACGAGGCCAGCGCCC.................................................................................................................................................................1811.0010100000000
............................................................................................................................................................................................................................................................................................................................................CGA---------CGACGATGACGACGA------GTACGT.............2411.0010100000000
......................................GACGAC---------GACAG---TGC--CCAGGA-------------GAG-TG.....................................................................................................................................................................................................................................................................................................2511.0010100000000
..............................................................................................................................................................CTCACGG---CCCGAGCAGCCGCT..........................................................................................................................................................................................................2111.0010100000000
....................................................................................................................................................................................................................................................................................................................................GACCAAGACGA---------CGACGAT.................................1811.0010100000000
..............................................................................................................................................................................................................................................................................................................................GACAACGACCAAGACGA---------CGACG...................................2211.0010100000000
.......................................................................................................................................................................................AACGATCGCAACTTTGAG---CGGA................................................................................................................................................................................2211.0010100000000
......................................................................................................................................................................................CAACGATCGCAACTTTGAG---C...................................................................................................................................................................................2011.0010100000000
.......................................................................................................................................................................................................................CAGCGCCCTGCGGCGGG--------------------------------------------------------------AGA----GCAACGGC---........................................................................2811.0010000001000
.............................................................................................................................................................................................................................................................................................................................................GA---------CGACGATGACGACGA------GT.................1911.0010100000000
.................................................................................................................................................ACTCGGGGAAGGCCTCACGG---C.......................................................................................................................................................................................................................2111.0010100000000
........ACC---GAGGACGAGGACGAGGACG---GG..........................................................................................................................................................................................................................................................................................................................................................2411.0010000000001
....................................................................................................................................................................................................................GGCCAGCGCCCTGCGGCGGG--------------------------------------------------------------..........................................................................................2011.0010100000000
.............................................................................................................................................................................................................................................................................................................GCAACGGC---CACAATGACAAC............................................................2011.0010010000000
........................................................................................................................................................................................ACGATCGCAACTTTGAG---C...................................................................................................................................................................................1811.0010000000001
......................................................................................................................AGACCC---TGCTGGACAGCCTGC..................................................................................................................................................................................................................................................2111.0010100000000
.................................................................................................................CTCCAAGACCC---TGCTGGAC.........................................................................................................................................................................................................................................................1911.0010100000000
..............GAGGACGAGGACGAGGACG---GGGAC.......................................................................................................................................................................................................................................................................................................................................................2430.3310000000001
..............GAGGACGAGGACGAGGACG---GG..........................................................................................................................................................................................................................................................................................................................................................2150.2010000000001
..........................................................................................................................................................................................................................................................................................................................................GACGA---------CGACGATGACGACGA------...................20180.0610100000000
droWil2
CGAACAGCTGA------GCT-------------------------------------------------------------------------GCGGCTGCGGCTGC-----------------------------------------------------------------------------------------CCAACAAAGCCCAAGCACAAAGCGCCGTGACGACG----------------------------------------------------------------------GCGACAGC---GACAGCGACGGCGGCGGAGACGA---------TGACGATGACGATGG------CTACAACGA------CGACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
GCTACTTG---------GACATGGACAGCGACG---ACTACGAC---------AACTA---TGC--GGACGA-------------G-------AAGTCCGCGGAGAC----------------GGCGGCCCG--------GCGCCAATTGCGAAAATTCGCGAGACCCGGCGAGCAGCCGCTCAACGATCGCAACTTTGAGGC---GGGCGAGATCAGTGTGCTGCGCCGCC--------------------------------------------------------------AGA----ACGG------------------AGGCGGAGACAT---------TGACGACGACGACGA------AGACGACGA------TGACSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................................................................................................................GAGACCCGGCGAGCAGCCGCT..........................................................................................................................................................................................................2112.002001000000100000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................GCTCAACGATCGCAACTTTGAG.......................................................................................................................................................................................2211.001100000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................GCAACTTTGAGGC---GGGCGAGATCAGT.....................................................................................................................................................................2611.001000000000000000000000000000001000000000000000000000000000000000
...........................................C---------AACTA---TGC--GGACGA-------------G-------AAGTCCGCG..........................................................................................................................................................................................................................................................................................2511.001000000000000000100000000000000000000000000000000000000000000000
................................................................................................TCCGCGGAGAC----------------GGCGGCCCG--------G...................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.....................................................AACTA---TGC--GGACGA-------------G-------AAG................................................................................................................................................................................................................................................................................................1811.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................TGACGACGACGACGA------AGAC...............1920.501000000000000000000000000000000000100000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................AGACAT---------TGACGACGACGAC...........................1920.501000000000000000001000000000000000000000000000000000000000000000
droMoj3
GGC-----------------GACGACAGCGACG---GAAACGTC---------GACTG---AGC--AACCAATAAATTCCACAGACAATCAAACAAACCAAGAAGCT----------------C---TGCCGGCCTCTCTGGCGCTCTCTGAGA----------------------------------------------------------------------------CGCAAGTACCCAAAGCACTCGAAACAGTCAGCGAATGCAAAACAGAAGAGCAAACGGCTGCAGCAGAAGCAGCAACAAC---AACAACAACAGCGACGTCAACGA---------CGACGACGACGACGA------CGACGTCAA------CGACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................................................................................................................................................................................................................................CAGCAGAAGCAGCAACAAC---A.......................................................................20120.081000010
.........................................................................................................................................................................................................................................................................................................................................................GACGACGACGACGA------CGACGT.............20200.051000001
............................................................................................................................................................................................................................................................................................................AGCAACAAC---AACAACAACAGC............................................................21200.051000010
droGri2
GACT--------------ACTATGACAACTATG--------------------------------GGGAGGA-------------C-------AGGTCCGAGGAGAC----------------C---GTCCG--------TCGCAATTTACGCAAATTTGCACGACCCGTCGAGCAGCCATTAAATGATCGCATCTTTGAG---CCGATTGAGATCAGTGCACTGCGACGCC--------------------------------------------------------------AGA----GCAATGAC---GAGAATGA---CAACGATGACGA---------TGACGAAGACGCAGA------CAATGACTA------TAACSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
....................................................................................................................................................................................................TTGAG---CCGATTGAGATCAGTG....................................................................................................................................................................2111.00101
.............................................................................................................................................................................GCAGCCATTAAATGATCGCA...............................................................................................................................................................................................2011.00110
droAna3
TCCTC---------------GACGACCTTGAGG---TCGAGGAC---------GATGA---CTCCAGTACGA-------------T-------ACGACTAAAGATAC----------------C---C----------------------------------------CTCGAACACCCTCTAAACGACCGTATGTTCGACATGCTGAACGAGGCGAGTGCCCTGCGGAAGG--------------------------------------------------------------GAT----TGGACAGCTCCAAGAG------CTACGAGGACGA---------GGACGACGACAACGA------CTATGACGA------TGACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................................................................................................................................CGACATGCTGAACGAGGCGAGT.....................................................................................................................................................................2211.001001000
..........................CTTGAGG---TCGAGGAC---------GATGA---CTCCA..............................................................................................................................................................................................................................................................................................................................2511.001100000
......................................GAGGAC---------GATGA---CTCCAGTACGA-------------T-------A..................................................................................................................................................................................................................................................................................................2411.001010000
..........................................................................................................................................................................................GACCGTATGTTCGACATGCTGAA...............................................................................................................................................................................2311.001100000
.....................................................................................................................................................................................................................................................................................................................................ACGAGGACGA---------GGACGACGACAACGA------CTT................2811.001100000
.......................GACCTTGAGG---TCGAGGAC---------GATGA---CTCC...............................................................................................................................................................................................................................................................................................................................2711.001100000
.................................................................................................CTAAAGATAC----------------C---C----------------------------------------CTCGAAC.................................................................................................................................................................................................................1911.001010000
.............................GAGG---TCGAGGAC---------GATGA---CTCC...............................................................................................................................................................................................................................................................................................................................2111.001010000
.....................................................................................................................................................................................................CGACATGCTGAACGAGGCG........................................................................................................................................................................1911.001000010
..............................................................................................CGACTAAAGATAC----------------C---C----------------------------------------CTCGAACACCCC............................................................................................................................................................................................................2711.001010000
........................................GGAC---------GATGA---CTCCAGTACGA-------------T-------ACGAC..............................................................................................................................................................................................................................................................................................2611.001100000
.............................................................................................................................................................................................................TGAACGAGGCGAGTGCCCTGC..............................................................................................................................................................2111.001100000
....................................................................ACGA-------------T-------ACGACTAAAGATAC----------------C---C----------------------------------------CTC.....................................................................................................................................................................................................................2411.001010000
droBip1
TCCTC---------------------GACGACC---TTGAGGAC---------GATGACGACTCCAGTACGA-------------T-------ACGACTCAAGATAC----------------C---C----------------------------------------CTCGAACACCCACTGAACGATCGAGTGTTCGATATGCTGAACGAGGCGAGTGCCCTGCGGAAGG--------------------------------------------------------------GGC----TGGACGCCTCCAAGAG------CTACGAGGACGA---------TGACGGCGACTATGA------CGATGACGA------TGACSizeHit CountTotal NormTotal
No Reads
droKik1
TCCGCTTTTCAAACGAAGACGATGACGATGACC---TGGACAACGACGACGACGACGA---TTCTAGTACGA-------------C-------TCGCATAAGGAT--------------------------------------------------------------------GCAACCGCTCAACGATCGCCGGTTTGAGATTATGAACGCAGCGAGTGCTCTGAGGAAGG--------------------------------------------------------------AGA----GT------GCCCAGAG------TTACGAGGACGATGA------CGACAATGACGATAA------CTATGACGA------TGACSizeHit CountTotal NormTotal
No Reads
droFic1
TTCGCTTTTCG------GGTGAAGACGATGACT---TGGACGAG------GAGGACGA---CTCCAGTACGA-------------C-------ACGACTTAGGTTGC----------------C---GAATG-------------------GAAAGCTTCCCAAA---TTCGAGCAACCTTTGAACGATCGCATGTTCAACATTCTGAACACAGCAAGTGCTTTGCCACTCG--------------------------------------------------------------AAA----ATCA---ATCCAAGAG------TTACGAGGACGACGACGACTATGACGACGATGACGA------TAACGACGA------TCCGSizeHit CountTotal NormTotal
No Reads
droEle1
CACGCTTTACGGACGCGGACGAGGACGATGAAT---TGGACGAA---------GATGA---CTCCGGCACGA-------------C-------ACGACTGCGGATTC----------------C---AAACG-------------------GAAAGCTTCCCAAA---TTCGAGCAACCGCTCAACGATCGCATGTTCAATATCCTAAACACGGCAAGTGCTCTGCCGCTGG--------------------------------------------------------------AGA----ACCA---ATCCAAGAA------CTACGAGGACGA---------CGACGATGACTATGA------CGATGACGA------GGACSizeHit CountTotal NormTotal
No Reads
droRho1
CCCGCTTTTCG------GACGAGGACGATGACC---TGGACGAA---------GACGA---TTCGGGTACGA-------------C-------ACGACTGAGGATTC----------------C---TTCTG-------------------GAAAGCTTCCCAGG---TTCGAGAAACCGCTCAACGATCGCATGTTTAATATACTAAATACGGCAAGTGCCCTGCCGCTCG--------------------------------------------------------------AGA----ATCA---ATCCAAGAA------CTACGAGGACGA---------------AGACGATGACTATGACGATGACGAAGACGATCCASizeHit CountTotal NormTotal
No Reads
droBia1
TTCCCTTTCCG------GACGAGGACGATGACC---TAGACGAG---------GAGGA---CGCGGGTACGA-------------C-------ACGACTTAAGATTC----------------C---TTCCG-------------------GAAAGGTTTCCCAG---TTCGAGCAACCGCTCAACGATCGCAGGTTCAATATTCTCAAGTCG------GCTCTGCCGCTGG--------------------------------------------------------------ACA----GTCA---GTCAAAGAG------TTACGAGGACGA---------------CGACGAGGA------CTATGACGA------AGACSizeHit CountTotal NormTotal
No Reads
droTak1
TACCCTTTCCG------GACGAGGACCTTGACGACCTTGACGAC------CCAGAGGA---CGCCAGTACGA-------------C-------GCGACTGAGGATTC----------------C---AGCCG-------------------GAAAGCTTCCCCAC---TTTGAGCAACCGCTCAACGATCGCCGGTTCAATATTCTCAACTCGGCGAGCGTTCTGCCGCTGG--------------------------------------------------------------AGA----GCCA---ATCGAAGAG------TTACGAGGACGA------------CGACGACGACGA------CTATGACGA------TGACSizeHit CountTotal NormTotal
No Reads
droEug1
TAGCCTTTCCG------GACGAGGACGATGACC---TGGACGAA---------GAAGAAGCTCCGCTTACAA-------------C-------GCGTCTAAGGATTC----------------C---TTCCG-------------------GAAAACTACCCAAG---TTCGAACAGCCACTCAACGATCGTAGATTCAATATCCTAAACTCGGGTAGTGTCCT------TG--------------------------------------------------------------AGA----ATCA---ATCGAAGAG------TTACGAGGACGAGAATGACGAGGACGATGACGATGA------CTATGACGA------TAATSizeHit CountTotal NormTotal
No Reads
dm3
TTCCCTTTCCG------GACGAGGACGATGACC---TAGACGAC---------AATGA---CAGCGGTACGA-------------C-------TCGACTAAGGATCC----------------C---ATCCG-------------------GAAAGCTTCCCAAA---TTTGAGCAACCGCTCAACGACCGCAGATTCAATATCCTAAACGCGGGAAGTGCTTTGCCGCTGG--------------------------------------------------------------ACA----ACCA---ATCGAAGAG------TTACGAGGACGA---------------TGACGACGA------CTATGACGA------GGACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................................................................................................................................GCCGCTGG--------------------------------------------------------------ACA----ACCA---ATCGAAGAG------T............................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................ACGA---------------TGACGACGA------CTATGACGA------....2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................ACA----ACCA---ATCGAAGAG------TTACGA.......................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................CA----ACCA---ATCGAAGAG------TTAC.........................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................CA----ACCA---ATCGAAGAG------TTACGAGGA....................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................AGAG------TTACGAGGACGA---------------TGAC..............................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................AG------TTACGAGGACGA---------------TGACGACG..........................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................ACGAGGACGA---------------TGACGACGA------CTATGAC............2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................GAG------TTACGAGGACGA---------------TGACGACGA------CTA................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................AAACGCGGGAAGTGCTTTGCCGCTGG--------------------------------------------------------------AC........................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................CA----ACCA---ATCGAAGAG------TTACGAGG.....................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................AG------TTACGAGGACGA---------------TGACGAC...........................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................CGA---------------TGACGACGA------CTATGACGA------....2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................CA----ACCA---ATCGAAGAG------TTACGAGGAC...................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................CGGTACGA-------------C-------TCGACTAAGGA........................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CTTTCCG------GACGAGGACGATGA.................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................CAACCGCTCAACGACCGCAG..............................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TCCG------GACGAGGACGATGACC---TAGACGAC---------...........................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................C---ATCCG-------------------GAAAGCTTCCCAAA---TTTG....................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................A-------------C-------TCGACTAAGGATCC----------------C---ATCC.............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................TCCG-------------------GAAAGCTTCCCAAA---TTTGAGCAA...............................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................ACA----ACCA---ATCGAAGAG------TTACGAGG.....................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................AACGACCGCAGATTCAATATCC...................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................G--------------------------------------------------------------ACA----ACCA---ATCGAAGAG------T............................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
......................................................................................................................................................................................................................................GG--------------------------------------------------------------ACA----ACCA---ATCGAAGAG------T............................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................TACGAGGACGA---------------TGACGACGA------CT.................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................G--------------------------------------------------------------ACA----ACCA---ATCGAAGAG------TTACGAG......................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................AGAG------TTACGAGGACGA---------------TGACGA............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................G--------------------------------------------------------------ACA----ACCA---ATCGAAGAG------TTACGAGGAC...................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................CGAAGAG------TTACGAGGACGA---------------TGACGA............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................ACGCGGGAAGTGCTTTGC..............................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..CCCTTTCCG------GACGAGGACGATGACC---TAG.........................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
...............................................................................................................................................................................................................AACGCGGGAAGTGCTTTGCCGCTGG--------------------------------------------------------------AC........................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................CGCGGGAAGTGCTTTGCCGCTGG--------------------------------------------------------------A.........................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................TTACGAGGACGA---------------TGACGAC...........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................ACGCGGGAAGTGCTTTGCCG............................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
......................................................................................................................................................................................................................................................................................................ACA----ACCA---ATCGAAGAG------TTACGAGGA....................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................CGACGA------CTATGACGA------GGA.1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................GAG------TTACGAGGACGA---------------TGACGACGA------C..................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................AAACGCGGGAAGTGCTTTGCCG............................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................GA---------------TGACGACGA------CTATGACGA------GGA.2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................CAACCGCTCAACGACCGCA...............................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................TTGCCGCTGG--------------------------------------------------------------ACA----ACCA---ATCGAAGAG------G............................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CCG------GACGAGGACGATGACC---TAGACG......................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TCCCTTTCCG------GACGAGGACGATGACC---............................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GACGATGACC---TAGACGAC---------...........................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................GATCC----------------C---ATCCG-------------------GAAAGCTTCCCA.............................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
....................................................................................................................................................................................................................................CTGG--------------------------------------------------------------ACA----ACCA---ATCGAAGAG------TTAC.........................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................TAAACGCGGGAAGTGCTTTGCCGCTGG--------------------------------------------------------------AC........................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.........................................................................................................................................................AAGCTTCCCAAA---TTTGAGCAACCG............................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...........................................C---------AATGA---CAGCGGTACGA-------------C-------TCG................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................AGGATCC----------------C---ATCCG-------------------GAAAGC...................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TCAATATCCTAAACGCGGGAAGTGC...................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TTCCCTTTCCG------GACGAGGACGATGACC---............................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................TACGAGGACGA---------------TGACGACGA------C..................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................AG------TTACGAGGACGA---------------TGACGACGA------CT.................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................A---ATCGAAGAG------TTACGAGGA....................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................AAGGATCC----------------C---ATCCG-------------------GAAAGCTTC................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................CGGGAAGTGCTTTGCCGCTGG--------------------------------------------------------------A.........................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................ACGAGGACGA---------------TGACGACGA------C..................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........CG------GACGAGGACGATC..................................................................................................................................................................................................................................................................................................................................................................15160.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TTCCCTTTCCG------GACGAGGACGATGACC---TAGACGAC---------AATGA---CGCCGGTACGA-------------C-------ACGACTAAGGATCC----------------C---ATCTG-------------------GAAAGCTTCCCAAA---TTTGAGCAACCGCTCAACGACCGCAGATTCAATATACTGAACGCGGGTAGTGCTTTGCCGCTGG--------------------------------------------------------------AGA----ACCA---ATCGAAGAG------TTACGAGGACGA---------------TGACGACGA------CTATGACGA------GGACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................................................................................................................................................................................................................................................G------TTACGAGGACGA---------------TGACGACGA------CT.................2413.00303000000000000000
.....TTTCCG------GACGAGGACGATGACC---T...........................................................................................................................................................................................................................................................................................................................................................2313.00300300000000000000
.............................................................................................................................................................................................................................................................................................................................................GA---------------TGACGACGA------CTATGACGA------G...2111.00100000000000100000
.....................................................................................................................................................................................................CAATATACTGAACGCGGGTAGT.....................................................................................................................................................................2211.00100100000000000000
......................................................................................................................................................................................................................................GG--------------------------------------------------------------AGA----ACCA---ATCGAAGAG------TTACGAGGA....................................................2711.00101000000000000000
...............................................................................................................................................................................................................................TGCCGCTGG--------------------------------------------------------------AGA----ACCA---ATCGAAGA....................................................................2411.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................TACGAGGACGA---------------TGACGAC...........................1811.00101000000000000000
TTCCCTTTCCG------GACGAGGAC......................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
...............................CC---TAGACGAC---------AATGA---CGCC...............................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
.......TCCG------GACGAGGACGATGACC---TA..........................................................................................................................................................................................................................................................................................................................................................2211.00100001000000000000
.........................................................................................................................................................................................................................................................................................................................................GGACGA---------------TGACGACGA------CTA................1811.00100001000000000000
...........................................................................................................................................................................................................................................................................................................................AG------TTACGAGGACGA---------------TGACGACGA------C..................2411.00101000000000000000
......................................................................................................................................................................................................................................................................................................AGA----ACCA---ATCGAAGAG------T............................................................1720.50100000000001000000
.......................................................................................................................................................................................................................................................................................................GA----ACCA---ATCGAAGAG------T............................................................1620.50100000000001000000
droSec2
TTCCCTTTCCG------GACGAGGACGATGACC---TAGACGAC---------AGTGA---CGCCGGTACGA-------------C-------ACGACTAAGGATCC----------------C---ATCCG-------------------GAAAGCTTCTCAAA---TTTGAGCAACCGCTCAACGACCGCAGATTCAATATCCTGAACGCGGGTAGTGCTTTGCCGCTGG--------------------------------------------------------------AAA----ACCA---ATCGAAGAG------TTACGAGGACGA---------TGACGATGACGACGA------CTATGACGA------GGACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................GATGACC---TAGACGAC---------AGTGA---CGCC...............................................................................................................................................................................................................................................................................................................................2411.0010010
..................................................................................................................................................................................................ATTCAATATCCTGAACGCG...........................................................................................................................................................................1911.0010010
..............................ACC---TAGACGAC---------AGTGA---CGCCGGTA...........................................................................................................................................................................................................................................................................................................................2411.0010010
......................................................................................................................................................................................................................................GG--------------------------------------------------------------AAA----ACCA---ATCGAAGAG------T............................................................1911.0010010
droYak3
TTCCTTTTCCG------GACGAGGACGATGACC---TAGACGAC---------GATGA---CGATGGTACGA-------------C-------ACGACTACGGATGC----------------C---TTCCG-------------------GAAAGCTTCCCAAA---TTTGAGCAACCGCTCAACGACCGCAGATTCAATATACTAAACGCGGGGAGTGCTTTGCCGCTGG--------------------------------------------------------------AGA----ACCA---GTCCAAAAG------TTACGAGGACGA---------------CGACGACGA------CTATGACGA------AGACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................................................................................................................................................................................GTGCTTTGCCGCTGG--------------------------------------------------------------AGA----ACCA---GT..........................................................................2411.00100000010000
........................................CGAC---------GATGA---CGATGGTACGA-------------C-------AC.................................................................................................................................................................................................................................................................................................2311.00100100000000
..........................GATGACC---TAGACGAC---------GATGA---C..................................................................................................................................................................................................................................................................................................................................2111.00100000010000
......................................................................................................................................................................................................................................................................................................................CCAAAAG------TTACGAGGACGA---------------CGACGAC...........................2611.00100000010000
......................GGACGATGACC---TAGACGAC---------GATGA---CGATG..............................................................................................................................................................................................................................................................................................................................2911.00100000010000
.....................................................GATGA---CGATGGTACGA-------------C-------ACG................................................................................................................................................................................................................................................................................................2011.00100000010000
.............................................................................................................................................................................GCAACCGCTCAACGACCGCAGATTCAAT.......................................................................................................................................................................................2811.00101000000000
.......................................................................................................................................................................................................ATATACTAAACGCGGGGAGT.....................................................................................................................................................................2011.00100000010000
.............................GACC---TAGACGAC---------GATGA---CGAT...............................................................................................................................................................................................................................................................................................................................2111.00100000010000
droEre2
TTCCCTTTTCG------GACGAGGACGATGACC---TAGACGAC---------GATGA---CGCTGGTACGA-------------C-------ACGACTAAGGATCC----------------C---TTCCG-------------------GAAAGCTTCCCAAA---TTTGAGCAACCGCTCAACGACCGCAGATTCAATATCCTAAACGCGGGGAGTGCTCTGCCGCTGG--------------------------------------------------------------AGA----ACCA---ATCCAAGAG------TTACGAGGACGA---------------TGACGATGA------CTACGACGA------GGACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................................................................................................................................................................................................................................TACGAGGACGA---------------TGACGATGA------CTACGA.............2611.0011000000
...................................................................................................................................................................................................TTCAATATCCTAAACGCGGGGA.......................................................................................................................................................................2211.0011000000
......................................................................................................................................................................................................................................................................................................AGA----ACCA---ATCCAAGAG------TTACGAGGAC...................................................2611.0010100000
...................................................................................................................................................................................................TTCAATATCCTAAACGCGGGGAG......................................................................................................................................................................2311.0010100000
..........................................................................................................................................................................................................................................................................................................................GAG------TTACGAGGACGA---------------TGACGATGA------C..................2511.0010000100
.......................................................................................................ATCC----------------C---TTCCG-------------------GAAAGCTTCCCAAA---TT......................................................................................................................................................................................................................2611.0010000100

Generated: 06/08/2015 at 05:20 PM