dpe_219

TATATGCTGACAATAACTGAGACACAATGTTTTGTTACGGTTGTTGTTGTTTCGTGCCCCACGTTGGGCGCCACTTTTGTAATGTGTCCCGGTGTTCTGGTGTGGTAGCTTTCGAGACGCATTCCACAAACTAGACAACTTGCATAGATTTTATGGTTAGCACTGTGT *********************************...((.....(((((((((.((.(((((..(((((((..................)))))))...)))))..))...))))))).))........))**********************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M042 female body	V050 head	M021 embryo	V057 head	V042 embryo	V111 male body
..................................................TTCGTGCCCCACGTTGGGCGCCA...............................................................................................	23	0	3	235.67	707	637	59	0	4	5	2
...................................................TCGTGCCCCACGTTGGGCGCCA...............................................................................................	22	0	6	56.50	339	249	77	1	12	0	0
..................................................TTCGTGCCCCACGTTGGG....................................................................................................	18	0	3	15.00	45	43	0	2	0	0	0
..................................................TTCGTGCCGCACGTTGGGCGCCA...............................................................................................	23	1	3	10.33	31	31	0	0	0	0	0
....................................................CGTGCCCCACGTTGGGCGCCA...............................................................................................	21	0	10	10.10	101	30	61	0	9	0	1
..................................................TTCGTGCCCCACGTTGGGCGCCC...............................................................................................	23	1	3	9.33	28	27	1	0	0	0	0
..................................................TTCGTGCCCCACGTTGGGC...................................................................................................	19	0	3	6.67	20	2	0	18	0	0	0
..................................................TTCGTGCCCCACGTTGGGCGCCT...............................................................................................	23	1	3	6.67	20	20	0	0	0	0	0
..................................................TTCGTGCCCCACGTTGGGCCCCA...............................................................................................	23	1	3	5.33	16	16	0	0	0	0	0
..................................................TTCGTGCCTCACGTTGGGCGCCA...............................................................................................	23	1	3	2.67	8	8	0	0	0	0	0
..................................................TTCGTGCCCCACGTTGGGCGCC................................................................................................	22	0	3	2.00	6	6	0	0	0	0	0
..................................................TTCGTGCCACACGTTGGGCGCCA...............................................................................................	23	1	5	2.00	10	10	0	0	0	0	0
...................................................TCGTGCCCGACGTTGGGCGCCA...............................................................................................	22	1	6	1.83	11	11	0	0	0	0	0
..................................................TTCGTGCCCCACGTTGGGCG..................................................................................................	20	0	3	1.33	4	4	0	0	0	0	0
..................................................TTCGTGCCCCACGTTGGGCGCGA...............................................................................................	23	1	3	1.33	4	4	0	0	0	0	0
.....................................................GTGCCCCACGTTGGGCGCCA...............................................................................................	20	0	14	1.21	17	6	3	1	1	0	6
.................................................TTTCGTGCCCCACGTTGGGCGCCA...............................................................................................	24	0	1	1.00	1	1	0	0	0	0	0
..................................................TTCGTGCCGCACGTTGGGCGCCC...............................................................................................	23	2	3	1.00	3	3	0	0	0	0	0
..................................................TTCGTGCCCCACGTTGGTCGCCA...............................................................................................	23	1	3	1.00	3	3	0	0	0	0	0
...................................................TCGTGCCCAACGTTGGGCGCCA...............................................................................................	22	1	6	0.83	5	5	0	0	0	0	0
..................................................TTCGTGCCCCACGTTGGGCGCTA...............................................................................................	23	1	3	0.67	2	2	0	0	0	0	0
..........................ATGTTTTGTTACGGTTGTTGTTGT......................................................................................................................	24	0	3	0.67	2	0	0	0	0	0	2
..................................................TTCGTGCCCCACGTTGGGCC..................................................................................................	20	1	4	0.50	2	2	0	0	0	0	0
.............................................CGTGGTTCGTGCCCCACGTTGGGCGCCA...............................................................................................	28	3	2	0.50	1	0	0	0	0	0	1
............................................TGTGGATTCGTGCCCCACGTTGGGCGCCA...............................................................................................	29	2	2	0.50	1	0	1	0	0	0	0
................................................GTTTCGAGCCCCACGTTGGGCGCCA...............................................................................................	25	1	2	0.50	1	0	1	0	0	0	0
...................................................TCGTGCCCCACGTTGGGC...................................................................................................	18	0	7	0.43	3	0	0	3	0	0	0
.................................................ATTCGTGCCCCACGTTGGG....................................................................................................	19	1	6	0.33	2	0	0	0	0	2	0
...................................................TCGTGCCCCACGTTGGGCCCCA...............................................................................................	22	1	6	0.33	2	2	0	0	0	0	0
...................................................TCGTGCCCCACGTTGGGCGCCT...............................................................................................	22	1	6	0.33	2	2	0	0	0	0	0
..................................................TTCGTGCCGCACGTTGGGCGCGA...............................................................................................	23	2	3	0.33	1	1	0	0	0	0	0
..................................................TTCGTGCCCCACGTTGGGCACCA...............................................................................................	23	1	3	0.33	1	1	0	0	0	0	0
..................................................TTCGTGCCCCACGTTGGGA...................................................................................................	19	1	3	0.33	1	0	0	1	0	0	0
..................................................TTCGTGCCCCACGTTGTGCCCCA...............................................................................................	23	2	3	0.33	1	1	0	0	0	0	0
..................................................TTCGTGCCGCACGTTGGGCCCCA...............................................................................................	23	2	3	0.33	1	1	0	0	0	0	0
..................................................TTCGTGCCCCACGTCGGGCGCCA...............................................................................................	23	1	3	0.33	1	1	0	0	0	0	0
..................................................TTCGTGCCCCACGTTGGTA...................................................................................................	19	2	3	0.33	1	1	0	0	0	0	0
..................................................TTCGTGCCCCGCGTTGGGCGCCA...............................................................................................	23	1	3	0.33	1	1	0	0	0	0	0
..................................................TTCGTGCCCCCCGTGGGGCGCCA...............................................................................................	23	2	3	0.33	1	0	1	0	0	0	0
..................................................TTCGTGCCCCACGTTAGACGCCA...............................................................................................	23	2	3	0.33	1	0	1	0	0	0	0
..................................................TTCGTGCCCCACGTTGGGG...................................................................................................	19	1	3	0.33	1	0	0	1	0	0	0
..................................................TTCGTGCCCCATGTTGGGCGCCA...............................................................................................	23	1	3	0.33	1	1	0	0	0	0	0
..................................................TTCGTGCCGCACGTTGGGCGCCT...............................................................................................	23	2	3	0.33	1	1	0	0	0	0	0
..................................................TTCGTGTCCCACGTTGGGCGCCA...............................................................................................	23	1	3	0.33	1	1	0	0	0	0	0
..................................................TTCGTCCCCCACGTTGGGCGCCC...............................................................................................	23	2	3	0.33	1	0	1	0	0	0	0
.................................................ATTCGTGCCCCACGTTGGGCGCCA...............................................................................................	24	1	6	0.33	2	1	1	0	0	0	0
...................................................TCGTGCCCCACGTTGGGCGCCC...............................................................................................	22	1	6	0.33	2	1	1	0	0	0	0
...................................................GCGTGCCCCACGTTGGGCGCCA...............................................................................................	22	1	10	0.30	3	3	0	0	0	0	0
..................................................TTCGTGCCCCACGCTGGGCGCCA...............................................................................................	23	1	4	0.25	1	1	0	0	0	0	0
..................................................TTCGTGCCCCACGCTGCGCGTCA...............................................................................................	23	3	4	0.25	1	0	1	0	0	0	0
..................................................TTCGTGCCCCACGTTGGGCGCA................................................................................................	22	1	4	0.25	1	1	0	0	0	0	0
..................................................TTCGTGCCCCACGTTGGGCCC.................................................................................................	21	1	4	0.25	1	1	0	0	0	0	0
..................................................TTCGTGCCGCACGTTGGGCGCAA...............................................................................................	23	2	4	0.25	1	1	0	0	0	0	0
.ATATGCTGACAATAACTGAGACACA..............................................................................................................................................	25	0	5	0.20	1	1	0	0	0	0	0
..................................................TTCGTGCCACAAGTTGGGCGCCA...............................................................................................	23	2	5	0.20	1	0	0	0	0	1	0
.ATATGCTGACAATAACTGAGACACAA.............................................................................................................................................	26	0	5	0.20	1	1	0	0	0	0	0
...............................................................TTGGGCGCCAATTTTGTAATGTGTG................................................................................	25	2	5	0.20	1	0	0	0	0	1	0
..................................................TTCGTGCCACACGTTGGGCGCCT...............................................................................................	23	2	5	0.20	1	1	0	0	0	0	0
...................................................TCGTGACCCACGTTGGGCGCCA...............................................................................................	22	1	10	0.20	2	0	2	0	0	0	0
..TATGCTGACAATAACTGAGACACAATGT..........................................................................................................................................	28	0	5	0.20	1	1	0	0	0	0	0
...................................................TCGTGCCCCACGTTGGGCGCC................................................................................................	21	0	6	0.17	1	1	0	0	0	0	0
...................................................TCGTGCCCCACGTTGCGCGCCA...............................................................................................	22	1	6	0.17	1	0	1	0	0	0	0
...................................................TCGTGCCCCACGTTAGGCGCCA...............................................................................................	22	1	6	0.17	1	0	0	0	1	0	0
...................................................TCGTGCCCCACGATGGGCGCCA...............................................................................................	22	1	6	0.17	1	1	0	0	0	0	0
...................................................TCGTGCCCCCCGTTGGGCGCCA...............................................................................................	22	1	6	0.17	1	0	1	0	0	0	0
...................................................TCGTGCCCCACGTTGGGCGC.................................................................................................	20	0	6	0.17	1	1	0	0	0	0	0
...................................................TCGTGCCCCACGTTGGGCCCC................................................................................................	21	1	6	0.17	1	0	0	0	0	1	0
...................................................TCGTGCCCGACGTTGGGCGCCC...............................................................................................	22	2	6	0.17	1	1	0	0	0	0	0
...................................................TCGTGCCCCACGGTGGGCGCC................................................................................................	21	1	6	0.17	1	1	0	0	0	0	0
................................................GTTTCGGGCCCCACGTTGGGCGCCA...............................................................................................	25	1	6	0.17	1	1	0	0	0	0	0
......................................................TGCCCCACGTTGGGCGCCA...............................................................................................	19	0	20	0.15	3	3	0	0	0	0	0
..................................................TTAGTGCCCCACGTTGGGCGCCA...............................................................................................	23	1	7	0.14	1	0	1	0	0	0	0
..................................................TACGTGCCCCACGTTGGGCGCCA...............................................................................................	23	1	7	0.14	1	1	0	0	0	0	0
...................................................TCGTGCACCACGTTGGCCGCCA...............................................................................................	22	2	8	0.13	1	0	1	0	0	0	0
...................................................TCGTGCCCCACGTTGGCCGCCA...............................................................................................	22	1	8	0.13	1	0	1	0	0	0	0
.................................................GTTCGAGCCCCACGTTGGGCGCCAC..............................................................................................	25	2	8	0.13	1	1	0	0	0	0	0
...........................................................................TTTGTAATGTGTCCCGGTGTTCTGG....................................................................	25	0	8	0.13	1	1	0	0	0	0	0
..............................................................................................................................CAAACTAGACAACTTGCATAGATTT.................	25	0	10	0.10	1	1	0	0	0	0	0
...................................................TCGTGCCCCACGTTGTGAGACA...............................................................................................	22	3	10	0.10	1	0	1	0	0	0	0
...................................................TCGCGCCCCACGTTGGGCGCCA...............................................................................................	22	1	20	0.10	2	0	0	0	2	0	0
....................................................CGTTCCCCACGTTGGGCCCCA...............................................................................................	21	2	10	0.10	1	1	0	0	0	0	0
....................................................CGTGCCCCACGTTGGGCG..................................................................................................	18	0	10	0.10	1	1	0	0	0	0	0
....................................................CGTGCCCCACGTTGGGCGCCT...............................................................................................	21	1	10	0.10	1	1	0	0	0	0	0
...................................................TCGTGCCGCACGTTGGGCGCCG...............................................................................................	22	2	10	0.10	1	0	0	0	1	0	0
....................................................CGTGCCCCCCGTTGGGCGCCA...............................................................................................	21	1	10	0.10	1	1	0	0	0	0	0
...................................................TCGTGACCCACGTTGCGCGCCA...............................................................................................	22	2	10	0.10	1	0	1	0	0	0	0
....................................................CGTGCCCCACGTTGGGCCCCA...............................................................................................	21	1	10	0.10	1	1	0	0	0	0	0
....................................................CGTGCCCCACGTTGTGCGCCA...............................................................................................	21	1	10	0.10	1	0	0	0	1	0	0
....................................................CGTGCCCCACGTTTGGCGCCA...............................................................................................	21	1	11	0.09	1	0	1	0	0	0	0
....................................................CGTGCCCCAGGTTGGCCGCCA...............................................................................................	21	2	12	0.08	1	0	0	0	1	0	0
........................................................................................................................ATTCCACAAACTAGACAACTTGC.........................	23	0	12	0.08	1	0	0	0	0	1	0
...............................................................................................................TCGAGACGCATTCCACAAACTAGACAACT............................	29	0	12	0.08	1	0	0	1	0	0	0
.....................................................................................................................CGCATTCCACAAACTAGACAACTTGCA........................	27	0	12	0.08	1	1	0	0	0	0	0
............................................................................................................................................TGCATAGATTCTATGGTTAGCACTGT..	26	1	12	0.08	1	1	0	0	0	0	0
.............................................................................................................................................GTAAAGATTTTATGGTTAGC.......	20	2	13	0.08	1	0	0	0	0	1	0
............................................................................................TGTTCTGGAGTGGTAGCTTTCGAGAC..................................................	26	1	13	0.08	1	1	0	0	0	0	0
............................................................................................TGTTCTGGTGTGGTAGCTTTCGAGA...................................................	25	0	13	0.08	1	1	0	0	0	0	0
..........................................................................................................AGCTTTCGAGACGCATTCCACA........................................	22	0	13	0.08	1	1	0	0	0	0	0
.....................................................GTGCCCCAGGTTGGGCGCCA...............................................................................................	20	1	14	0.07	1	1	0	0	0	0	0
.....................................................GTGCCCCATGTTGGGCGCCA...............................................................................................	20	1	16	0.06	1	1	0	0	0	0	0
....................................................TGTGCCCCACGTTGGACGCCA...............................................................................................	21	2	20	0.05	1	0	0	0	1	0	0
.................................................TTTCGAGCCCCACGGTGG.....................................................................................................	18	2	20	0.05	1	1	0	0	0	0	0
...................................................TCGCGCCCCACGTTGGGC...................................................................................................	18	1	20	0.05	1	0	0	1	0	0	0
........................................................................................CCGGTGTTGTGGTGCGGGA.............................................................	19	3	20	0.05	1	0	0	0	0	0	1
..................................................TTCGCGCCCCACGTTGGGCGCCT...............................................................................................	23	2	20	0.05	1	1	0	0	0	0	0

TATATGCTGACAATAACTGAGACACAATGTTTTGTTACGGTTGTTGTTGTTTCGTGCCCCACGTTGGGCGCCACTTTTGTAATGTGTCCCGGTGTTCTGGTGTGGTAGCTTTCGAGACGCATTCCACAAACTAGACAACTTGCATAGATTTTATGGTTAGCACTGTGT
***********************************...((.....(((((((((.((.(((((..(((((((..................)))))))...)))))..))...))))))).))........))************************************

Read size

# Mismatch

Hit Count

Total Norm

Total

M042
female body

V050
head

M021
embryo

V057
head

V042
embryo

V111
male body

..................................................TTCGTGCCCCACGTTGGGCGCCA...............................................................................................

235.67

707

637

...................................................TCGTGCCCCACGTTGGGCGCCA...............................................................................................

56.50

339

249

..................................................TTCGTGCCCCACGTTGGG....................................................................................................

15.00

..................................................TTCGTGCCGCACGTTGGGCGCCA...............................................................................................

10.33

....................................................CGTGCCCCACGTTGGGCGCCA...............................................................................................

10.10

101

..................................................TTCGTGCCCCACGTTGGGCGCCC...............................................................................................

9.33

..................................................TTCGTGCCCCACGTTGGGC...................................................................................................

6.67

..................................................TTCGTGCCCCACGTTGGGCGCCT...............................................................................................

6.67

..................................................TTCGTGCCCCACGTTGGGCCCCA...............................................................................................

5.33

..................................................TTCGTGCCTCACGTTGGGCGCCA...............................................................................................

2.67

..................................................TTCGTGCCCCACGTTGGGCGCC................................................................................................

2.00

..................................................TTCGTGCCACACGTTGGGCGCCA...............................................................................................

2.00

...................................................TCGTGCCCGACGTTGGGCGCCA...............................................................................................

1.83

..................................................TTCGTGCCCCACGTTGGGCG..................................................................................................

1.33

..................................................TTCGTGCCCCACGTTGGGCGCGA...............................................................................................

1.33

.....................................................GTGCCCCACGTTGGGCGCCA...............................................................................................

1.21

.................................................TTTCGTGCCCCACGTTGGGCGCCA...............................................................................................

1.00

..................................................TTCGTGCCGCACGTTGGGCGCCC...............................................................................................

1.00

..................................................TTCGTGCCCCACGTTGGTCGCCA...............................................................................................

1.00

...................................................TCGTGCCCAACGTTGGGCGCCA...............................................................................................

0.83

..................................................TTCGTGCCCCACGTTGGGCGCTA...............................................................................................

0.67

..........................ATGTTTTGTTACGGTTGTTGTTGT......................................................................................................................

0.67

..................................................TTCGTGCCCCACGTTGGGCC..................................................................................................

0.50

.............................................CGTGGTTCGTGCCCCACGTTGGGCGCCA...............................................................................................

0.50

............................................TGTGGATTCGTGCCCCACGTTGGGCGCCA...............................................................................................

0.50

................................................GTTTCGAGCCCCACGTTGGGCGCCA...............................................................................................

0.50

...................................................TCGTGCCCCACGTTGGGC...................................................................................................

0.43

.................................................ATTCGTGCCCCACGTTGGG....................................................................................................

0.33

...................................................TCGTGCCCCACGTTGGGCCCCA...............................................................................................

0.33

...................................................TCGTGCCCCACGTTGGGCGCCT...............................................................................................

0.33

..................................................TTCGTGCCGCACGTTGGGCGCGA...............................................................................................

0.33

..................................................TTCGTGCCCCACGTTGGGCACCA...............................................................................................

0.33

..................................................TTCGTGCCCCACGTTGGGA...................................................................................................

0.33

..................................................TTCGTGCCCCACGTTGTGCCCCA...............................................................................................

0.33

..................................................TTCGTGCCGCACGTTGGGCCCCA...............................................................................................

0.33

..................................................TTCGTGCCCCACGTCGGGCGCCA...............................................................................................

0.33

..................................................TTCGTGCCCCACGTTGGTA...................................................................................................

0.33

..................................................TTCGTGCCCCGCGTTGGGCGCCA...............................................................................................

0.33

..................................................TTCGTGCCCCCCGTGGGGCGCCA...............................................................................................

0.33

..................................................TTCGTGCCCCACGTTAGACGCCA...............................................................................................

0.33

..................................................TTCGTGCCCCACGTTGGGG...................................................................................................

0.33

..................................................TTCGTGCCCCATGTTGGGCGCCA...............................................................................................

0.33

..................................................TTCGTGCCGCACGTTGGGCGCCT...............................................................................................

0.33

..................................................TTCGTGTCCCACGTTGGGCGCCA...............................................................................................

0.33

..................................................TTCGTCCCCCACGTTGGGCGCCC...............................................................................................

0.33

.................................................ATTCGTGCCCCACGTTGGGCGCCA...............................................................................................

0.33

...................................................TCGTGCCCCACGTTGGGCGCCC...............................................................................................

0.33

...................................................GCGTGCCCCACGTTGGGCGCCA...............................................................................................

0.30

..................................................TTCGTGCCCCACGCTGGGCGCCA...............................................................................................

0.25

..................................................TTCGTGCCCCACGCTGCGCGTCA...............................................................................................

0.25

..................................................TTCGTGCCCCACGTTGGGCGCA................................................................................................

0.25

..................................................TTCGTGCCCCACGTTGGGCCC.................................................................................................

0.25

..................................................TTCGTGCCGCACGTTGGGCGCAA...............................................................................................

0.25

.ATATGCTGACAATAACTGAGACACA..............................................................................................................................................

0.20

..................................................TTCGTGCCACAAGTTGGGCGCCA...............................................................................................

0.20

.ATATGCTGACAATAACTGAGACACAA.............................................................................................................................................

0.20

...............................................................TTGGGCGCCAATTTTGTAATGTGTG................................................................................

0.20

..................................................TTCGTGCCACACGTTGGGCGCCT...............................................................................................

0.20

...................................................TCGTGACCCACGTTGGGCGCCA...............................................................................................

0.20

..TATGCTGACAATAACTGAGACACAATGT..........................................................................................................................................

0.20

...................................................TCGTGCCCCACGTTGGGCGCC................................................................................................

0.17

...................................................TCGTGCCCCACGTTGCGCGCCA...............................................................................................

0.17

...................................................TCGTGCCCCACGTTAGGCGCCA...............................................................................................

0.17

...................................................TCGTGCCCCACGATGGGCGCCA...............................................................................................

0.17

...................................................TCGTGCCCCCCGTTGGGCGCCA...............................................................................................

0.17

...................................................TCGTGCCCCACGTTGGGCGC.................................................................................................

0.17

...................................................TCGTGCCCCACGTTGGGCCCC................................................................................................

0.17

...................................................TCGTGCCCGACGTTGGGCGCCC...............................................................................................

0.17

...................................................TCGTGCCCCACGGTGGGCGCC................................................................................................

0.17

................................................GTTTCGGGCCCCACGTTGGGCGCCA...............................................................................................

0.17

......................................................TGCCCCACGTTGGGCGCCA...............................................................................................

0.15

..................................................TTAGTGCCCCACGTTGGGCGCCA...............................................................................................

0.14

..................................................TACGTGCCCCACGTTGGGCGCCA...............................................................................................

0.14

...................................................TCGTGCACCACGTTGGCCGCCA...............................................................................................

0.13

...................................................TCGTGCCCCACGTTGGCCGCCA...............................................................................................

0.13

.................................................GTTCGAGCCCCACGTTGGGCGCCAC..............................................................................................

0.13

...........................................................................TTTGTAATGTGTCCCGGTGTTCTGG....................................................................

0.13

..............................................................................................................................CAAACTAGACAACTTGCATAGATTT.................

0.10

...................................................TCGTGCCCCACGTTGTGAGACA...............................................................................................

0.10

...................................................TCGCGCCCCACGTTGGGCGCCA...............................................................................................

0.10

....................................................CGTTCCCCACGTTGGGCCCCA...............................................................................................

0.10

....................................................CGTGCCCCACGTTGGGCG..................................................................................................

0.10

....................................................CGTGCCCCACGTTGGGCGCCT...............................................................................................

0.10

...................................................TCGTGCCGCACGTTGGGCGCCG...............................................................................................

0.10

....................................................CGTGCCCCCCGTTGGGCGCCA...............................................................................................

0.10

...................................................TCGTGACCCACGTTGCGCGCCA...............................................................................................

0.10

....................................................CGTGCCCCACGTTGGGCCCCA...............................................................................................

0.10

....................................................CGTGCCCCACGTTGTGCGCCA...............................................................................................

0.10

....................................................CGTGCCCCACGTTTGGCGCCA...............................................................................................

0.09

....................................................CGTGCCCCAGGTTGGCCGCCA...............................................................................................

0.08

........................................................................................................................ATTCCACAAACTAGACAACTTGC.........................

0.08

...............................................................................................................TCGAGACGCATTCCACAAACTAGACAACT............................

0.08

.....................................................................................................................CGCATTCCACAAACTAGACAACTTGCA........................

0.08

............................................................................................................................................TGCATAGATTCTATGGTTAGCACTGT..

0.08

.............................................................................................................................................GTAAAGATTTTATGGTTAGC.......

0.08

............................................................................................TGTTCTGGAGTGGTAGCTTTCGAGAC..................................................

0.08

............................................................................................TGTTCTGGTGTGGTAGCTTTCGAGA...................................................

0.08

..........................................................................................................AGCTTTCGAGACGCATTCCACA........................................

0.08

.....................................................GTGCCCCAGGTTGGGCGCCA...............................................................................................

0.07

.....................................................GTGCCCCATGTTGGGCGCCA...............................................................................................

0.06

....................................................TGTGCCCCACGTTGGACGCCA...............................................................................................

0.05

.................................................TTTCGAGCCCCACGGTGG.....................................................................................................

0.05

...................................................TCGCGCCCCACGTTGGGC...................................................................................................

0.05

........................................................................................CCGGTGTTGTGGTGCGGGA.............................................................

0.05

..................................................TTCGCGCCCCACGTTGGGCGCCT...............................................................................................

0.05

ATATACGACTGTTATTGACTCTGTGTTACAAAACAATGCCAACAACAACAAAGCACGGGGTGCAACCCGCGGTGAAAACATTACACAGGGCCACAAGACCACACCATCGAAAGCTCTGCGTAAGGTGTTTGATCTGTTGAACGTATCTAAAATACCAATCGTGACACA **********************************...((.....(((((((((.((.(((((..(((((((..................)))))))...)))))..))...))))))).))........))*********************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M042 female body	V042 embryo
..........................................................................................CCACAAGACCACACCATCGAAAGCT.....................................................	25	0	13	0.15	2	2	0
................................................................................................................GCTCTGCGTAAGGTGTTTGATCTGTT..............................	26	0	13	0.08	1	1	0
...............................................................................................................AGCTCTGCGTAAGGTGTTTGATCTGT...............................	26	0	13	0.08	1	1	0
...............................................................................................................AGCTCTGCGTAAGGTGTTTGATCTGTT..............................	27	0	13	0.08	1	1	0
......................................................................................AGGGCCACAAGACCACACCATCGAA.........................................................	25	0	13	0.08	1	1	0
...............................ACCAATGCCAACCACAAAAAA....................................................................................................................	21	3	18	0.06	1	0	1

ATATACGACTGTTATTGACTCTGTGTTACAAAACAATGCCAACAACAACAAAGCACGGGGTGCAACCCGCGGTGAAAACATTACACAGGGCCACAAGACCACACCATCGAAAGCTCTGCGTAAGGTGTTTGATCTGTTGAACGTATCTAAAATACCAATCGTGACACA
************************************...((.....(((((((((.((.(((((..(((((((..................)))))))...)))))..))...))))))).))........))***********************************

Read size

# Mismatch

Hit Count

Total Norm

Total

M042
female body

V042
embryo

..........................................................................................CCACAAGACCACACCATCGAAAGCT.....................................................

0.15

................................................................................................................GCTCTGCGTAAGGTGTTTGATCTGTT..............................

0.08

...............................................................................................................AGCTCTGCGTAAGGTGTTTGATCTGT...............................

0.08

...............................................................................................................AGCTCTGCGTAAGGTGTTTGATCTGTT..............................

0.08

......................................................................................AGGGCCACAAGACCACACCATCGAA.........................................................

0.08

...............................ACCAATGCCAACCACAAAAAA....................................................................................................................

0.06

Species	Coordinate	ID	Alignment
droPer2	scaffold_122:110486-110653 +	dpe_219	TATATGCTGACAATAA-----------------------------------------------------------CTGAGACACAATGT-TTTGTTACGGTTGTTGTTGTTTCGTGCCCCACGTTG-GGCGCCACTTTTGTAATGTGTCCCGGTGT-TCTGGTGTGGTAGCTTTCGAGACGCATTCCACAAACTAGACAACTTGCATA-GATTTTATGGTTAGCACTGTGT
dp5	Unknown_singleton_1788:2872-3039 -		TATATGCTGACAATAA-----------------------------------------------------------CTGAGACACAAAGT-TTTGTTACGGTTGTTGTTGTATCGTGCCCCACGTTG-GGCGCCACTTTTGTAATGTGTCCCGGTGT-TCTGGTGTGGTAGCTTTCGAGACGCATTCCACAAACTAGACAACTTTCATA-GATTTTATGGTTAGCACTGTGT
droKik1	scf7180000298642:229-375 -		TTGGTGTTAACTTTA----------------------------------------------------------AATTCAAATTTAAAATATCTGTCGCCTCTTTTATCATTCGTTGCCCCACGTTG-GGCGCCACTTTTGTACTGAATCTTTGGTTGAC----------------AGGAGTCTTCCCTTTTTCTAGAGTG---TGATT-GAA-TGTCGGTTAGCACT----
droRho1	scf7180000779819:5948-6135 -		TAATTGCTTAG--------------ACATAGCTTTGAACGAATAAGGCTTAACGGATGTTGGTGTTAAATTCAAACATTTCTTTATTAATTTTAATGCCTTTG--TTTGTTCTTTGCCCCACGTTG-GGTGCCACTTTTGTAATGATTCTCGTGGCAAC----------------AGGAG-CTGCCTTTTAACTAGATTT---TGATTTGA--GAGCGGTTAGCACT----
droTak1	scf7180000414726:3915-4108 +		TCTAG---GACAATTATGTTTTTGGCC--AGACCTGAACGAATAAGGCTTAACAGATGTCAGTGTTAAGTTCGATGAGAGCCTTA--ATTTCTTTTGCCTCTTC-CTTGCTCGTTGCTCCACGTTGGGGCGCCACT-TTGTAATGATTCTCAGG-CAAC----------------CTGAG-TT-GCCAGTAACTAGACTT----AATTTGA--TTGTGGTTAGCATTG---

Species

Coordinate

Alignment

droPer2

scaffold_122:110486-110653 +

dpe_219

TATATGCTGACAATAA-----------------------------------------------------------CTGAGACACAATGT-TTTGTTACGGTTGTTGTTGTTTCGTGCCCCACGTTG-GGCGCCACTTTTGTAATGTGTCCCGGTGT-TCTGGTGTGGTAGCTTTCGAGACGCATTCCACAAACTAGACAACTTGCATA-GATTTTATGGTTAGCACTGTGT

dp5

Unknown_singleton_1788:2872-3039 -

TATATGCTGACAATAA-----------------------------------------------------------CTGAGACACAAAGT-TTTGTTACGGTTGTTGTTGTATCGTGCCCCACGTTG-GGCGCCACTTTTGTAATGTGTCCCGGTGT-TCTGGTGTGGTAGCTTTCGAGACGCATTCCACAAACTAGACAACTTTCATA-GATTTTATGGTTAGCACTGTGT

droKik1

scf7180000298642:229-375 -

TTGGTGTTAACTTTA----------------------------------------------------------AATTCAAATTTAAAATATCTGTCGCCTCTTTTATCATTCGTTGCCCCACGTTG-GGCGCCACTTTTGTACTGAATCTTTGGTTGAC----------------AGGAGTCTTCCCTTTTTCTAGAGTG---TGATT-GAA-TGTCGGTTAGCACT----

droRho1

scf7180000779819:5948-6135 -

TAATTGCTTAG--------------ACATAGCTTTGAACGAATAAGGCTTAACGGATGTTGGTGTTAAATTCAAACATTTCTTTATTAATTTTAATGCCTTTG--TTTGTTCTTTGCCCCACGTTG-GGTGCCACTTTTGTAATGATTCTCGTGGCAAC----------------AGGAG-CTGCCTTTTAACTAGATTT---TGATTTGA--GAGCGGTTAGCACT----

droTak1

scf7180000414726:3915-4108 +

TCTAG---GACAATTATGTTTTTGGCC--AGACCTGAACGAATAAGGCTTAACAGATGTCAGTGTTAAGTTCGATGAGAGCCTTA--ATTTCTTTTGCCTCTTC-CTTGCTCGTTGCTCCACGTTGGGGCGCCACT-TTGTAATGATTCTCAGG-CAAC----------------CTGAG-TT-GCCAGTAACTAGACTT----AATTTGA--TTGTGGTTAGCATTG---

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droPer2

TATATGCTGACAATAA-----------------------------------------------------------CTGAGACACAATGT-TTTGTTACGGTTGTTGTTGTTTCGTGCCCCACGTTG-GGCGCCACTTTTGTAATGTGTCCCGGTGT-TCTGGTGTGGTAGCTTTCGAGACGCATTCCACAAACTAGACAACTTGCATA-GATTTTATGGTTAGCACTGTGT	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
..............................................................................................................TTCGTGCCCCACGTTG-GGCGCCA.................................................................................................	23	3	235.67	707	0	637	5	59	4	2
...............................................................................................................TCGTGCCCCACGTTG-GGCGCCA.................................................................................................	22	6	56.50	339	1	249	0	77	12	0
..............................................................................................................TTCGTGCCCCACGTTG-GG......................................................................................................	18	3	15.00	45	2	43	0	0	0	0
................................................................................................................CGTGCCCCACGTTG-GGCGCCA.................................................................................................	21	10	10.10	101	0	30	0	61	9	1
..............................................................................................................TTCGTGCCCCACGTTG-GGCGCCC.................................................................................................	23	3	9.33	28	0	27	0	1	0	0
..............................................................................................................TTCGTGCCCCACGTTG-GGC.....................................................................................................	19	3	6.67	20	18	2	0	0	0	0
..............................................................................................................TTCGTGCCCCACGTTG-GGCGCCT.................................................................................................	23	3	6.67	20	0	20	0	0	0	0
..............................................................................................................TTCGTGCCCCACGTTG-GGCGCC..................................................................................................	22	3	2.00	6	0	6	0	0	0	0
..............................................................................................................TTCGTGCCCCACGTTG-GGCG....................................................................................................	20	3	1.33	4	0	4	0	0	0	0
.................................................................................................................GTGCCCCACGTTG-GGCGCCA.................................................................................................	20	14	1.21	17	1	6	0	3	1	6
.............................................................................................................TTTCGTGCCCCACGTTG-GGCGCCA.................................................................................................	24	1	1.00	1	0	1	0	0	0	0
.....................................................................................ATGT-TTTGTTACGGTTGTTGTTGT.........................................................................................................................	24	3	0.67	2	0	0	0	0	0	2
..............................................................................................................TTCGTGCCCCACGTTG-GGCC....................................................................................................	20	4	0.50	2	0	2	0	0	0	0
...............................................................................................................TCGTGCCCCACGTTG-GGC.....................................................................................................	18	7	0.43	3	3	0	0	0	0	0
...............................................................................................................TCGTGCCCCACGTTG-GGCGCCT.................................................................................................	22	6	0.33	2	0	2	0	0	0	0
..............................................................................................................TTCGTGCCCCACGTTG-GGA.....................................................................................................	19	3	0.33	1	1	0	0	0	0	0
..............................................................................................................TTCGTGCCCCACGTTG-GTA.....................................................................................................	19	3	0.33	1	0	1	0	0	0	0
..............................................................................................................TTCGTGCCCCACGTTG-GGG.....................................................................................................	19	3	0.33	1	1	0	0	0	0	0
...............................................................................................................TCGTGCCCCACGTTG-GGCGCCC.................................................................................................	22	6	0.33	2	0	1	0	1	0	0
..............................................................................................................TTCGTGCCCCACGTTG-GGCGCA..................................................................................................	22	4	0.25	1	0	1	0	0	0	0
.ATATGCTGACAATAA-----------------------------------------------------------CTGAGACACA..................................................................................................................................................	25	5	0.20	1	0	1	0	0	0	0
.ATATGCTGACAATAA-----------------------------------------------------------CTGAGACACAA.................................................................................................................................................	26	5	0.20	1	0	1	0	0	0	0
..TATGCTGACAATAA-----------------------------------------------------------CTGAGACACAATGT-.............................................................................................................................................	28	5	0.20	1	0	1	0	0	0	0
...............................................................................................................TCGTGCCCCACGTTG-GGCGCC..................................................................................................	21	6	0.17	1	0	1	0	0	0	0
...............................................................................................................TCGTGCCCCACGTTG-GGCGC...................................................................................................	20	6	0.17	1	0	1	0	0	0	0
..................................................................................................................TGCCCCACGTTG-GGCGCCA.................................................................................................	19	20	0.15	3	0	3	0	0	0	0
........................................................................................................................................TTTGTAATGTGTCCCGGTGT-TCTGG.....................................................................	25	8	0.13	1	0	1	0	0	0	0
............................................................................................................................................................................................CAAACTAGACAACTTGCATA-GATTT.................	25	10	0.10	1	0	1	0	0	0	0
................................................................................................................CGTGCCCCACGTTG-GGCG....................................................................................................	18	10	0.10	1	0	1	0	0	0	0
................................................................................................................CGTGCCCCACGTTG-GGCGCCT.................................................................................................	21	10	0.10	1	0	1	0	0	0	0
......................................................................................................................................................................................ATTCCACAAACTAGACAACTTGC..........................	23	12	0.08	1	0	0	1	0	0	0
.............................................................................................................................................................................TCGAGACGCATTCCACAAACTAGACAACT.............................	29	12	0.08	1	1	0	0	0	0	0
...................................................................................................................................................................................CGCATTCCACAAACTAGACAACTTGCA.........................	27	12	0.08	1	0	1	0	0	0	0
.........................................................................................................................................................TGT-TCTGGTGTGGTAGCTTTCGAGA....................................................	25	13	0.08	1	0	1	0	0	0	0
........................................................................................................................................................................AGCTTTCGAGACGCATTCCACA.........................................	22	13	0.08	1	0	1	0	0	0	0

dp5

TATATGCTGACAATAA-----------------------------------------------------------CTGAGACACAAAGT-TTTGTTACGGTTGTTGTTGTATCGTGCCCCACGTTG-GGCGCCACTTTTGTAATGTGTCCCGGTGT-TCTGGTGTGGTAGCTTTCGAGACGCATTCCACAAACTAGACAACTTTCATA-GATTTTATGGTTAGCACTGTGT	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
...............................................................................................................TCGTGCCCCACGTTG-GGCGCCA.................................................................................................	22	4	105.75	423	0	362	1	3	2	40	15	0	0	0
................................................................................................................CGTGCCCCACGTTG-GGCGCCA.................................................................................................	21	4	20.50	82	0	67	2	0	0	7	6	0	0	0
.................................................................................................................GTGCCCCACGTTG-GGCGCCA.................................................................................................	20	5	6.80	34	1	25	3	2	0	1	2	0	0	0
...............................................................................................................TCGTGCCCCACGTTG-GGCGCC..................................................................................................	21	4	1.50	6	0	6	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................TAGACAACTTTCATA-GATTTTATGGT...........	26	2	1.00	2	0	2	0	0	0	0	0	0	0	0
...............................................................................................................TCGTGCCCCACGTTG-GGCGCCT.................................................................................................	22	5	0.80	4	0	3	0	1	0	0	0	0	0	0
...............................................................................................................TCGTGCCCCACGTTG-GGCGCCC.................................................................................................	22	4	0.75	3	0	2	1	0	0	0	0	0	0	0
..........................................................................................................................................TGTAATGTGTCCCGGTGT-TCTGGT....................................................................	24	3	0.67	2	0	1	0	0	0	0	0	1	0	0
.........................................................................................................................................................TGT-TCTGGTGTGGTAGCTTTCGA......................................................	23	3	0.67	2	0	2	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................AAACTAGACAACTTTCATA-GATTT.................	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................AACTAGACAACTTTCATA-GATTT.................	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................TGTGTCCCGGTGT-TCTGGAA...................................................................	20	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................TCTGGTGTGGTAGCTTTCGAGACGCAT...............................................	27	2	0.50	1	0	0	0	0	0	0	0	1	0	0
.........................................................................................................................................................TGT-TCTGGTGTGGTAGCTTTCGAGC....................................................	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................TGTCCCGGTGT-TCTGGTGTGGTAGCTT..........................................................	27	2	0.50	1	0	0	0	0	0	0	1	0	0	0
............................................................................................................................................TAATGTGTCCCGGTGT-TCTG......................................................................	20	3	0.33	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................GTAGCTTTCGAGACGCATTC.............................................	20	3	0.33	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................GTAGCTTTCGAGACGCATTCCA...........................................	22	3	0.33	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................TCCCGGTGT-TCTGGTGTGGTAG.............................................................	22	3	0.33	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................TGTAATGTGTCCCGGTGT-TCTG......................................................................	22	3	0.33	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................GGTGTGGTAGCTTTCGAGACGC.................................................	22	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................TGT-TCTGGTGTGGTAGCTTTCG.......................................................	22	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................GCTTTCGAGACGCATTCCACAAA.......................................	23	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................GCTTTCGAGACGCATTCCACAAACT.....................................	25	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................GCTTTCGAGACGCATTCCACAAAC......................................	24	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................TGTCCCGGTGT-TCTGGTGTG.................................................................	20	3	0.33	1	0	0	0	0	1	0	0	0	0	0
..........................................................................................................................................TGTAATGTGTCCCGGTGT-TCTGG.....................................................................	23	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................TAGCTTTCGAGACGCATTCCA...........................................	21	3	0.33	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................TGGTGTGGTAGCTTTCGAGACGC.................................................	23	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................TAGCTTTCGAGACGCATTCCACAAACTA....................................	28	3	0.33	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................CGAGACGCATTCCACAAACTAGACA................................	25	3	0.33	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................TGGTGTGGTAGCTTTCGAG.....................................................	19	3	0.33	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................CGTGCCCCACGTTG-GGCGC...................................................................................................	19	4	0.25	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................TCGTGCCCCACGTTG-GGCGC...................................................................................................	20	4	0.25	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................CGTGCCCCACGTTG-GGCGCC..................................................................................................	20	4	0.25	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................TCGTGCCCCACGTTG-GGCG....................................................................................................	19	4	0.25	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................TGGTGTGGTAGCTTTCGTT.....................................................	19	4	0.25	1	0	0	0	0	1	0	0	0	0	0
...................................................................................................................................................TCCCGGTGT-TCTGGTGTGGTAAAA...........................................................	24	4	0.25	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................GCATTCCACAAACTAGACAACTT............................	23	5	0.20	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................TA-GATTTTATGGTTAGCACTGTG.	23	5	0.20	1	0	0	0	0	0	0	0	1	0	0
.................................................................................................................GTGCCCCACGTTG-GGCGC...................................................................................................	18	6	0.17	1	0	0	1	0	0	0	0	0	0	0
....................................................................................................................CCCCACGTTG-GGCGCCA.................................................................................................	17	20	0.05	1	0	0	0	0	0	0	0	0	0	1

droKik1

TTGGTGTTAACTTTA----------------------------------------------------------AATTCAAATTTAAAATATCTGTCGCCTCTTTTATCATTCGTTGCCCCACGTTG-GGCGCCACTTTTGTACTGAATCTTTGGTTGAC----------------AGGAGTCTTCCCTTTTTCTAGAGTG---TGATT-GAA-TGTCGGTTAGCACT----	Size	Hit Count	Total Norm	Total
No Reads

droRho1

TAATTGCTTAG--------------ACATAGCTTTGAACGAATAAGGCTTAACGGATGTTGGTGTTAAATTCAAACATTTCTTTATTAATTTTAATGCCTTTG--TTTGTTCTTTGCCCCACGTTG-GGTGCCACTTTTGTAATGATTCTCGTGGCAAC----------------AGGAG-CTGCCTTTTAACTAGATTT---TGATTTGA--GAGCGGTTAGCACT----	Size	Hit Count	Total Norm	Total
No Reads

droTak1

TCTAG---GACAATTATGTTTTTGGCC--AGACCTGAACGAATAAGGCTTAACAGATGTCAGTGTTAAGTTCGATGAGAGCCTTA--ATTTCTTTTGCCTCTTC-CTTGCTCGTTGCTCCACGTTGGGGCGCCACT-TTGTAATGATTCTCAGG-CAAC----------------CTGAG-TT-GCCAGTAACTAGACTT----AATTTGA--TTGTGGTTAGCATTG---	Size	Hit Count	Total Norm	Total
No Reads

-24.8	-24.6	-24.0	-24.0

dpe_219

scaffold_122:110536-110603 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads