dpe_2166

CDS [Dper\GL25220-cds]; CDS [Dper\GL25220-cds]; exon [dper_GLEANR_7587:4]; exon [dper_GLEANR_7587:3]; intron [Dper\GL25220-in]

##################################################-------------------------------------------------------------------------------------------------------################################################## TGCTGAAGAAGTTGAACGTGGCCATTGAAGTGAATCCCATTTCAAACCAGGTGCTGCAGCTGATCACCGACTTCCCGGAACCATCCCTGTGCCACCTTTTTCGCCGATGGCTATCCCGTGGTGATCTCCTCGGACGATCCATCCTTCTGGAAGGCCACGCCTCTGACGCACGACTTTTACATCGCCTTCCTGGGAATTGCCTC **************************************************.(((.((..((((((((.......(((.(((((...(((..........))).)))))...)))..))))))))..)))))................****************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M021 embryo	M042 female body	V042 embryo	V111 male body	V050 head
.............................................................................................................................CTCCTCGGACGATCCATCCTTCTG......................................................	24	0	2	3.00	6	6	0	0	0	0
.............................................................................................................................CTCCTCGGACGATCCATCCTTCTGGAA...................................................	27	0	2	2.50	5	5	0	0	0	0
.............................................................................................................................CTCCTCGGACGATCCATCCTTCT.......................................................	23	0	2	1.50	3	3	0	0	0	0
................................................................................................................................CTCGGACGATCCATCCTTCTGGAA...................................................	24	0	2	1.50	3	3	0	0	0	0
....GAAGAAGTTGAACGTGGCCATTGAA..............................................................................................................................................................................	25	0	2	1.00	2	2	0	0	0	0
...........................................AAACCAGGTGCTGCAGCTG.............................................................................................................................................	19	0	2	1.00	2	2	0	0	0	0
................................................................................................................................CTCGGACGATCCATCCTTCTGGAAGGCCA..............................................	29	0	2	1.00	2	2	0	0	0	0
....................................................GCTGCAGCTGATCACCGACT...................................................................................................................................	20	0	2	1.00	2	2	0	0	0	0
..........................................................................................................................................................CCACGCCTCTGACGCACGACTT...........................	22	0	2	1.00	2	0	2	0	0	0
..................................................GTGCTGCAGCTGATCACCGACT...................................................................................................................................	22	0	2	1.00	2	2	0	0	0	0
..GTGAAGACGTTGAGCGTGGCC....................................................................................................................................................................................	21	3	5	0.60	3	0	0	0	2	1
......................................ATTTCAAACCAGGTGCTGC..................................................................................................................................................	19	0	2	0.50	1	0	0	1	0	0
...........................................................................................................................ATCTCCTCGGACGATCCATCCTTCTGGAA...................................................	29	0	2	0.50	1	1	0	0	0	0
....................................................GCTGCAGCTGATCACCGA.....................................................................................................................................	18	0	2	0.50	1	0	1	0	0	0
.....................................................................................................................GTGGTGATCTCCTCGGACG...................................................................	19	0	2	0.50	1	0	0	1	0	0
........................................................................................................................GTGATCTCCTCGGACGAT.................................................................	18	0	2	0.50	1	1	0	0	0	0
...TGAAGACGTTGAGCGTGGCC....................................................................................................................................................................................	20	2	2	0.50	1	0	1	0	0	0
......................................................................................CTGTGCCACCTTTTTCGCC..................................................................................................	19	0	2	0.50	1	0	1	0	0	0
......................................................................................................................................................................CGCACGACTTTTACATCGCC.................	20	0	2	0.50	1	0	1	0	0	0
.........AGTTGAACGTGGCCATTGAAGT............................................................................................................................................................................	22	0	2	0.50	1	0	0	1	0	0
.............................GTGAATCCCATTTCAAACCAGGTG......................................................................................................................................................	24	0	2	0.50	1	0	1	0	0	0
...............................GAATCCCATTTCAAACCAGGTGCTGC..................................................................................................................................................	26	0	2	0.50	1	0	1	0	0	0
.....................................................................................................................GTGGTGATCTCCTCGGACGATC................................................................	22	0	2	0.50	1	0	0	0	1	0
...............................................................................................................................................................................TTTACATCGCCTTCCTGGG.........	19	0	2	0.50	1	1	0	0	0	0
................................................................................................TTTTTCGCCGATGGCTATCCCGTG...................................................................................	24	0	2	0.50	1	0	0	1	0	0
...........................................AAACCAGGTGCTGCAGCTGATCAC........................................................................................................................................	24	0	2	0.50	1	1	0	0	0	0
.............................................................................................................................CTCCTCGGACGATCCATCCTTCG.......................................................	23	1	2	0.50	1	1	0	0	0	0
..GTGAAGACGTTGAGCGTGGC.....................................................................................................................................................................................	20	3	10	0.20	2	0	1	0	1	0
..................................................................................................................CCCGTGGTTATCACCCCGG......................................................................	19	3	12	0.08	1	1	0	0	0	0

ACGACTTCTTCAACTTGCACCGGTAACTTCACTTAGGGTAAAGTTTGGTCCACGACGTCGACTAGTGGCTGAAGGGCCTTGGTAGGGACACGGTGGAAAAAGCGGCTACCGATAGGGCACCACTAGAGGAGCCTGCTAGGTAGGAAGACCTTCCGGTGCGGAGACTGCGTGCTGAAAATGTAGCGGAAGGACCCTTAACGGAG ****************************************************.(((.((..((((((((.......(((.(((((...(((..........))).)))))...)))..))))))))..)))))................**************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V057 head	V111 male body
......................................................ACGTCGAGTAGAGGCTGAA..................................................................................................................................	19	2	9	0.11	1	1	0
..................................................................................................................................GACTGCTAGATAGGACGAC......................................................	19	3	20	0.10	2	2	0
....................................................................CGGGAGGGCCTTGGTATGG....................................................................................................................	19	3	20	0.05	1	0	1

Species	Coordinate	ID	Alignment
droPer2	scaffold_9:2070068-2070270 +	dpe_2166	TGCTGAAGAAGTTGAACGTGGCCATTGAAGTGAATCCCATTTCAAACCAGGTGCTGCAGCTGATCACCGACTTCCCGGAACCATCCCTGTGCCACCTTTTTCGCCGATGGCTATCCCGTGGTGATCTCCTCGGACGATCCATCCTTCTGGAAGGCCACGCCTCTGACGCACGACTTTTACATCGCCTTCCTGGGAATTGCCTC
dp5	XR_group6:3777109-3777310 +		TGCTAAAGAAGCTGAACGTGGCCATCGAAGTGAATCCCATTTCGAACCAGGTGCTGCAGCTGATAACCGACTTC-CGGAACCATCCCTGTGCCACCTTTTTCGCCGATGGCTATCCCGTAGTGATCTCCTCGGACGATCCATCCTTCTGGAAGGCCACGCCTCTGACGCACGACTTTTACATCGCCTTCCTGGGAATTGCCTC
droWil2	scf2_1100000004830:286165-286366 +		TGGTTAAGAAACTAAATGTGGGCATTGAGGTCAATCCGGTTTCGAATCAAGTGCTACAATTGATATCCGATTTT-CGTAATCATCCATGTGCCCATTACATTGCCGATGGCTATCCCGTTGTTATCTCATCCGATGATCCATCCTTTTGGAAAGCAACTCCGCTGACGCATGACTACTACATCACATTCCTGGGTATTGCCTC
droVir3	scaffold_13049:6695560-6695761 +		TGGTCCGAAAGATGAACGTGGCCATTGAGGTGAATCCCGTGTCGAATCAGGTGCTAAAATTGGTCAGCGATTTT-CGTAATCATCCCTGCTCTCAATTCTTTGCCGATGGCTATCCTGTCGTCATATCATCCGATGATCCGAGCTTCTGGAAGGCCACACCCTTGTCCCATGACTATTATATTGCCTTTCTGGGCATCGCCTC
droMoj3	scaffold_6680:5022681-5022882 +		TGGTTAAGAAACTGAATGTGGCCATCGAGGTGAATCCTTTGTCGAATCAAGTGCTCAAGCTGGTCAGCGATTTC-CGTAACCATCCGTGCTCTCAGTTCTTCGCCGACGGCTATCCGGTCATCATCTCATCCGATGATCCCAGCTTCTGGAAGGCCACGCCCCTCTCGCACGACTATTACATCGCCTTCCTGGGAATCGCCTC
droGri2	scaffold_8883:8039-8240 -		TGGTCAAGAAATTGAATGTAGCTATCGAAGTGAATCCCGTATCGAATCAGGTGTTGCAATTGATCAGTGATTTC-CGTAATCATCCCTGCTCACAATTCTTTGCTGATGGCTATCCAGTTGTCATATCCTCCGATGATCCATCATTCTGGAAGGCCACTCCATTGACGCACGACTATTACATTGCTTTCCTGGGCATTGCCTC
droAna3	scaffold_13337:14441917-14442118 -		TGCTCAAGAGACTGAATGTGGCCATTGAGGTGAACCCGATCTCCAACCAGGTGCTGCAGCTGATCACGGACTTC-CGGAATCATCCCTGTTCCCACTTCTTCGCTGATGGCTATCCTGTGGTGATCTCCTCAGACGATCCATCCTTCTGGAAGGCCACTCCCTTGACTCATGACTTCTACATCGCCTACTTGGGCATCGCCTC
droBip1	scf7180000396641:844509-844710 +		TGCTCAAGAGACTGAATGTGGCCATCGAGGTCAACCCAATCTCCAACCAGGTGCTGCAGTTGATTACAGACTTC-CGGAATCATCCGTGCGCCCACTTCTTCGCCGACGGCTATCCAGTGGTGATCTCATCGGACGATCCATCCTTCTGGAAGGCGACCCCGCTGACCCATGACTTCTACATCGCCTACTTGGGCATCGCTTC
droKik1	scf7180000302351:139185-139386 +		TGCTGAAGAAGCTGAATGTGGCCATTGAGGTCAACCCAATCTCGAATCAGGTGCTCCAGCTGGTCACGGACTTC-CGGAACCATCCCTGCTCCCACTACTTTGCCGATGGTTATCCAGTGGTGATCTCTTCGGATGATCCATCCTTCTGGAAGGCCACACCCTTGAGCCATGACTTTTACATTGCCTTCCTGGGCATTGCCTC
droFic1	scf7180000454107:1334872-1335073 -		TGCTGAAGCGACTGAACGTGGCCATCGAGGTGAACCCGATTTCGAACCAGGTGCTCCAGCTGGTCACGGACTTC-CGCAACCACCCGTGCTCGCACTTCTTCGCCGACGGCTATCCCGTGGTCATCTCCTCGGACGATCCCTCCTTCTGGAAGGCCACTCCTTTGACGCACGACTTCTACATCGCCTTCCTGGGAATCGCCTC
droEle1	scf7180000490993:670395-670596 -		TGCTGAAGAAACTGAACGTGGCCGTTGAGGTCAACCCGATTTCGAATCAGGTGCTCCAGCTGGTCACCGACTTC-CGCAACCATCCGTGCTCGCACTTCTTTGCCGATGGCTATCCGGTGGTCATTTCCTCGGACGATCCGTCCTTCTGGAAGGCCACGCCCCTGACGCACGACTTCTACATTGCCTTTTTGGGAATTGCCTC
droRho1	scf7180000779490:54125-54326 -		TGCTGAAGAAACTGAATGTGGCCATCGAAGTGAACCCGATTTCGAATCAGGTGCTCCAGCTGGTCACGGACTTC-CGCAACCATCCCTGCTCGCACTTCTTCGCCGATGGGTATCCGGTGGTTATCTCCTCGGACGATCCGTCCTTCTGGAAGGCCACCCCGCTGACGCACGACTTCTACATTGCCTTTTTGGGAATCGCCTC
droBia1	scf7180000302193:1051979-1052180 -		TGCTGAAGAGGCTGAATGTGGCCATCGAGGTGAACCCGATCTCGAACCAGGTGCTGCAGTTGGTCACGGACTTC-CGCAACCACCCGTGCGCCCACTTCTTCGCCGACGGCTATCCGGTGGTCATCTCCTCGGACGATCCCTCCTTCTGGAAGGCCACGCCCCTGACGCACGACTTCTACATTGCCTTTCTGGGAATCGCCTC
droTak1	scf7180000415409:543430-543631 -		TGCTGAAGAAGCTGAATGTGGCCATCGAGGTGAACCCCATATCGAATCAGGTGCTGCAGCTGGTCACGGACTTC-CGCAACCATCCGTGCTCGCACTTCTTCGCCGACGGCTATCCGGTGGTCATTTCCTCGGACGATCCCTCCTTCTGGAAGGCCACGCCCCTGACGCACGACTTCTATATCGCCTTCCTGGGCATCGCCTC
droEug1	scf7180000409471:1818290-1818491 +		TGCTGAAGAAACTGAATGTGGCCATTGAGGTCAGCCCCATTTCGAATCAGGTGCTTCAGTTGGTCACGGACTTC-CGGAACCACCCGTGCTCCCACTTCATAGCCGATGGCTATCCGGTGGTTATTTCCTCGGATGATCCCTCCTTCTGGAAGGCCACGCCCCTCTCGCACGATTTCTATATCGCTTTTCTGGGAATAGCCTC
dm3	chr3L:17745734-17745935 -		TGCTGAAAAAGCTGAATGTGGCCATTGAAGTGAATCCGATTTCGAATCAAGTGCTCCAGCTGGTCTCTGACTTC-CGCAACCATCCGTGCTCTCACTTCTTCGCCGATGGCTATCCAGTGGTTATATCCTCGGATGATCCCTCCTTCTGGAAAGCCACTCCCCTGACGCATGACTTCTATATCGCCTTCTTAGGAATCGCCTC
droSim2	3l:17329590-17329791 -		TGCTGAAAAAGCTGAATGTGGCCATTGAAGTGAACCCGATTTCAAATCAAGTGCTCCAGCTGGTCTCTGACTTC-CGCAACCATCCGTGCTCCCACTTCTTCGCCGATGGCTATCCAGTGGTTATATCCTCGGATGATCCCTCCTTCTGGAAGGCCACTCCCCTGTCGCACGACTTCTATATCGCCTTCCTAGGAATCGCCTC
droSec2	scaffold_0:9792965-9793166 -		TGCTGAAAAAGCTGAATGTGGCCATTGAAGTGAACCCGATTTCGAATCAAGTGCTCCAGCTGGTCTCTGACTTC-CGCAACCATCCGTGCTCCCACTTCTTCGCCGATGGCTACCCAGTGGTTATATCCTCGGATGATCCCTCCTTCTGGAAGGCCACTCCCCTGTCGCACGACTTCTATATCGCCTTCTTAGGAATCGCCTC
droYak3	3L:16312344-16312545 +		TGCTGAAAAAGCTGAATGTGGCCATTGAGGTGAACCCGATTTCGAATCAGGTGCTCCAGCTGGTCTCTGACTTC-CGCAACCATCCGTGCTCGCACTTCTTTGCCGATGGCTATCCGGTGGTTATATCCTCGGATGATCCCTCCTTCTGGAAGGCCACTCCCCTGACGCACGACTTCTATATCGCCTTCTTGGGAATCGCCTC
droEre2	scaffold_4784:16114580-16114781 +		TGCTGAAAAAACTGAATGTGGCCATTGAGGTCAACCCGATTTCGAATCAGGTGCTCCAGCTGGTCTCTGACTTC-CGCAACCATCCGTGCTCGCACTTCTTTGCCGATGGCTATCCGGTGGTCATATCCTCCGATGATCCCTCCTTCTGGAAGGCCACTCCCCTCTCGCACGACTTCTATATCGCCTTCTTGGGAATCGCCTC

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droPer2

TGCTGAAGAAGTTGAACGTGGCCATTGAAGTGAATCCCATTTCAAACCAGGTGCTGCAGCTGATCACCGACTTCCCGGAACCATCCCTGTGCCACCTTTTTCGCCGATGGCTATCCCGTGGTGATCTCCTCGGACGATCCATCCTTCTGGAAGGCCACGCCTCTGACGCACGACTTTTACATCGCCTTCCTGGGAATTGCCTC	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
.............................................................................................................................CTCCTCGGACGATCCATCCTTCTG......................................................	24	2	3.00	6	6	0	0	0	0	0
.............................................................................................................................CTCCTCGGACGATCCATCCTTCTGGAA...................................................	27	2	2.50	5	5	0	0	0	0	0
.............................................................................................................................CTCCTCGGACGATCCATCCTTCT.......................................................	23	2	1.50	3	3	0	0	0	0	0
................................................................................................................................CTCGGACGATCCATCCTTCTGGAA...................................................	24	2	1.50	3	3	0	0	0	0	0
....GAAGAAGTTGAACGTGGCCATTGAA..............................................................................................................................................................................	25	2	1.00	2	2	0	0	0	0	0
...........................................AAACCAGGTGCTGCAGCTG.............................................................................................................................................	19	2	1.00	2	2	0	0	0	0	0
................................................................................................................................CTCGGACGATCCATCCTTCTGGAAGGCCA..............................................	29	2	1.00	2	2	0	0	0	0	0
....................................................GCTGCAGCTGATCACCGACT...................................................................................................................................	20	2	1.00	2	2	0	0	0	0	0
..........................................................................................................................................................CCACGCCTCTGACGCACGACTT...........................	22	2	1.00	2	0	2	0	0	0	0
..................................................GTGCTGCAGCTGATCACCGACT...................................................................................................................................	22	2	1.00	2	2	0	0	0	0	0
......................................ATTTCAAACCAGGTGCTGC..................................................................................................................................................	19	2	0.50	1	0	0	1	0	0	0
...........................................................................................................................ATCTCCTCGGACGATCCATCCTTCTGGAA...................................................	29	2	0.50	1	1	0	0	0	0	0
....................................................GCTGCAGCTGATCACCGA.....................................................................................................................................	18	2	0.50	1	0	1	0	0	0	0
.....................................................................................................................GTGGTGATCTCCTCGGACG...................................................................	19	2	0.50	1	0	0	1	0	0	0
........................................................................................................................GTGATCTCCTCGGACGAT.................................................................	18	2	0.50	1	1	0	0	0	0	0
......................................................................................CTGTGCCACCTTTTTCGCC..................................................................................................	19	2	0.50	1	0	1	0	0	0	0
......................................................................................................................................................................CGCACGACTTTTACATCGCC.................	20	2	0.50	1	0	1	0	0	0	0
.........AGTTGAACGTGGCCATTGAAGT............................................................................................................................................................................	22	2	0.50	1	0	0	1	0	0	0
.............................GTGAATCCCATTTCAAACCAGGTG......................................................................................................................................................	24	2	0.50	1	0	1	0	0	0	0
...............................GAATCCCATTTCAAACCAGGTGCTGC..................................................................................................................................................	26	2	0.50	1	0	1	0	0	0	0
.....................................................................................................................GTGGTGATCTCCTCGGACGATC................................................................	22	2	0.50	1	0	0	0	0	0	1
...............................................................................................................................................................................TTTACATCGCCTTCCTGGG.........	19	2	0.50	1	1	0	0	0	0	0
................................................................................................TTTTTCGCCGATGGCTATCCCGTG...................................................................................	24	2	0.50	1	0	0	1	0	0	0
...........................................AAACCAGGTGCTGCAGCTGATCAC........................................................................................................................................	24	2	0.50	1	1	0	0	0	0	0
.............................................................................................................................CTCCTCGGACGATCCATCCTTCG.......................................................	23	2	0.50	1	1	0	0	0	0	0

dp5

TGCTAAAGAAGCTGAACGTGGCCATCGAAGTGAATCCCATTTCGAACCAGGTGCTGCAGCTGATAACCGACTTC-CGGAACCATCCCTGTGCCACCTTTTTCGCCGATGGCTATCCCGTAGTGATCTCCTCGGACGATCCATCCTTCTGGAAGGCCACGCCTCTGACGCACGACTTTTACATCGCCTTCCTGGGAATTGCCTC	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
...........................................................................................................................................................................GACTTTTACATCGCCTTCCTGGG.........	23	1	2.00	2	0	2	0	0	0	0	0	0	0	0
...TAAAGAAGCTGAACGTGGCC....................................................................................................................................................................................	20	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.............................GTGAATCCCATTTCGAACCAGGT.......................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.GCTAAAGAAGCTGAACGTGGCC....................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............................GAATCCCATTTCGAACCAGGTGCTG...................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................................AACCAGGTGCTGCAGCTGATAACC.......................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........................................CGAACCAGGTGCTGCAGCTGA............................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........CTGAACGTGGCCATCGAAGT............................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1	0	0	0	0	0
............................................................................................................GGCTATCCCGTAGTGATCTCCTCGGACG...................................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................CGCCGATGGCTATCCCGTAGTGATCTC...........................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................GTGGCCATCGAAGTGAATCCCATTTC................................................................................................................................................................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0
..........GCTGAACGTGGCCATCGAA..............................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......................................................TGCAGCTGATAACCGACTTC-C...............................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........AGCTGAACGTGGCCATCGAAGT............................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0
............................................................................................................GGCTATCCCGTAGTGATCTCCTC........................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............TGAACGTGGCCATCGAAGT............................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0	0	0	0	0
...........CTGAACGTGGCCATCGAAGTGA..........................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........GCTGAACGTGGCCATCGAAGTGAATCC......................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................ACTTTTACATCGCCTTCCTGGGA........	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0

droWil2

TGGTTAAGAAACTAAATGTGGGCATTGAGGTCAATCCGGTTTCGAATCAAGTGCTACAATTGATATCCGATTTT-CGTAATCATCCATGTGCCCATTACATTGCCGATGGCTATCCCGTTGTTATCTCATCCGATGATCCATCCTTTTGGAAAGCAACTCCGCTGACGCATGACTACTACATCACATTCCTGGGTATTGCCTC	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
....TAAGAAACTAAATGTGGGC....................................................................................................................................................................................	19	1	4.00	4	0	0	0	4	0
...........CTAAATGTGGGCATTGAGGTC...........................................................................................................................................................................	21	1	3.00	3	0	0	2	1	0
..............AATGTGGGCATTGAGGTCAATCCGGTTT.................................................................................................................................................................	28	1	2.00	2	0	0	2	0	0
.......GAAACTAAATGTGGGCATTGAGGT............................................................................................................................................................................	24	1	2.00	2	0	0	2	0	0
............TAAATGTGGGCATTGAGGTC...........................................................................................................................................................................	20	1	2.00	2	0	0	1	1	0
.......GAAACTAAATGTGGGCATTGAGGTC...........................................................................................................................................................................	25	1	2.00	2	0	0	2	0	0
................TGTGGGCATTGAGGTCAATCCGGT...................................................................................................................................................................	24	1	1.00	1	0	0	0	1	0
.................GTGGGCATTGAGGTCAATC.......................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0
.................................ATCCGGTTTCGAATCAAGTG......................................................................................................................................................	20	1	1.00	1	0	1	0	0	0
.........AACTAAATGTGGGCATTGA...............................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0
..........ACTAAATGTGGGCATTGAGGT............................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0
...TTAAGAAACTAAATGTGGGC....................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0
..........................................................ATTGATATCCGATTTT-CGTAAT..........................................................................................................................	22	1	1.00	1	0	0	0	1	0
..................................................................................................CATTGCCGATGGCTATCCCGT....................................................................................	21	1	1.00	1	0	0	0	1	0
....................................................................................................TTGCCGATGGCTATCCCGTTGT.................................................................................	22	1	1.00	1	0	0	0	1	0
.......GAAACTAAATGTGGGCATTGAGGTCA..........................................................................................................................................................................	26	1	1.00	1	0	0	0	1	0
...........................................................................................................................................................AACTCCGCTGACGCATGA..............................	18	1	1.00	1	0	1	0	0	0
.......................ATTGAGGTCAATCCGGTTTCGAATCA..........................................................................................................................................................	26	1	1.00	1	0	0	0	1	0
.....AAGAAACTAAATGTGGGC....................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0
..........................GAGGTCAATCCGGTTTCGAAT............................................................................................................................................................	21	1	1.00	1	0	0	0	1	0
........AAACTAAATGTGGGCATTGAGGTCAATCC......................................................................................................................................................................	29	1	1.00	1	0	0	1	0	0
...........CTAAATGTGGGCATTGAGGTCAAT........................................................................................................................................................................	24	1	1.00	1	0	0	0	1	0
............................................................TGATATCCGATTTT-CGTAATC.........................................................................................................................	21	1	1.00	1	0	0	0	1	0
................................................AAGTGCTACAATTGATATCCG......................................................................................................................................	21	1	1.00	1	0	0	0	1	0
.........................................................................................................................................................GCAACTCCGCTGACGCATGACT............................	22	1	1.00	1	0	1	0	0	0
.........AACTAAATGTGGGCATTGAGGTC...........................................................................................................................................................................	23	1	1.00	1	0	0	0	1	0
.................................................................................................ACATTGCCGATGGCTATCCCGTTGTA................................................................................	26	1	1.00	1	0	0	0	1	0
.................................................................................CATCCATGTGCCCATTACATTGCCGAT...............................................................................................	27	1	1.00	1	0	0	0	1	0
.................GTGGGCATTGAGGTCAATCCG.....................................................................................................................................................................	21	1	1.00	1	0	0	0	1	0
..........................GAGGTCAATCCGGTTTCGAATCAAGT.......................................................................................................................................................	26	1	1.00	1	0	1	0	0	0
.............................................................GATATCCGATTTT-CGTAAT..........................................................................................................................	19	1	1.00	1	0	1	0	0	0
...............ATGTGGGCATTGAGGTCAATCCGGTTTC................................................................................................................................................................	28	1	1.00	1	0	0	1	0	0
......................CATTGAGGTCAATCCGGTTTCGA..............................................................................................................................................................	23	1	1.00	1	0	0	1	0	0
...........................................................................................................................ATCTCATCCGATGATCCATC............................................................	20	1	1.00	1	0	0	1	0	0
.........AACTAAATGTGGGCATTGAGGT............................................................................................................................................................................	22	1	1.00	1	0	0	0	1	0
.............AAATGTGGGCATTGAGGTCA..........................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0
....................................................................................................................................GATGATCCATCCTTTTGGAAAGCAA..............................................	25	1	1.00	1	0	0	0	1	0
..........................................CGAATCAAGTGCTACAATTG.............................................................................................................................................	20	1	1.00	1	0	0	0	1	0
........................................TTCGAATCAAGTGCTACAATTGA............................................................................................................................................	23	1	1.00	1	0	0	0	1	0
...........................................................................................................................................................AACTCCGCTGACGCATGACT............................	20	1	1.00	1	0	0	0	1	0
...............................................................................................................................CATCCGATGATCCATCCTTTTGGAAAGC................................................	28	1	1.00	1	0	0	1	0	0
..............................................................................................ATTACATTGCCGATGGCTATCCCGTTGT.................................................................................	28	1	1.00	1	0	0	0	1	0
.........................................................AATTGATATCCGATTTT-CGTAAT..........................................................................................................................	23	1	1.00	1	0	0	0	1	0
...................................................TGCTACAATTGATATCCGATTTT-CGT.............................................................................................................................	26	1	1.00	1	0	0	0	1	0

droVir3

TGGTCCGAAAGATGAACGTGGCCATTGAGGTGAATCCCGTGTCGAATCAGGTGCTAAAATTGGTCAGCGATTTT-CGTAATCATCCCTGCTCTCAATTCTTTGCCGATGGCTATCCTGTCGTCATATCATCCGATGATCCGAGCTTCTGGAAGGCCACACCCTTGTCCCATGACTATTATATTGCCTTTCTGGGCATCGCCTC	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
.................................................................................CATCCCTGCTCTCAATTCTTTGCC..................................................................................................	24	1	5.00	5	0	0	2	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................ATTGGTCAGCGATTTT-CGTAAT..........................................................................................................................	22	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0
..................TGGCCATTGAGGTGAATCCCGTGTC................................................................................................................................................................	25	1	2.00	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................TTGCCGATGGCTATCCTGTCGT.................................................................................	22	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................CATCCGATGATCCGAGCTTCTG......................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................TCCCTGCTCTCAATTCTTTGCCGATG..............................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................TCGTCATATCATCCGATGATCCGAGC...........................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................TCCGATGATCCGAGCTTCTGGAAGGCCA..............................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................ATCAGGTGCTAAAATTGGTCAGCGATT...................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................TCAGCGATTTT-CGTAATCATCCCTGCTCT..............................................................................................................	29	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................TTGAGGTGAATCCCGTGTCGAATCAGG........................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....CCGAAAGATGAACGTGGCC....................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................TCCGAGCTTCTGGAAGGCCACAC...........................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................AATCATCCCTGCTCTCAATTCTTTGCC..................................................................................................	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................GAAGGCCACACCCTTGTCCCATGACTAT..........................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................TTGCCGATGGCTATCCTGTCGTCATA.............................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................CTCAATTCTTTGCCGATGGC............................................................................................	20	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................TCCCGTGTCGAATCAGGTGCTAAAAT...............................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................TCTGGAAGGCCACACCCTTGTCC...................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................TCTTTGCCGATGGCTATCCTGTCGT.................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............TGAACGTGGCCATTGAGGTGAATCCCG....................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................CAGGTGCTAAAATTGGTCAGCGATTT..................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........AAGATGAACGTGGCCATTGAGGTGAA.........................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............AACGTGGCCATTGAGGTGA..........................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
.........................................................................................................................TCATATCATCCGATGATCCGAGCTT.........................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................TGGCCATTGAGGTGAATCCCGTG..................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........ATGAACGTGGCCATTGAGGT............................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
...............................................................................ATCATCCCTGCTCTCAATTCTTTGCC..................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................TCCCTGCTCTCAATTCTTTGCCGATGG.............................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................TCATCCCTGCTCTCAATTCTTTGCCGA................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........AGATGAACGTGGCCATTGAGGTGAATC.......................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
...............................................................................................................TATCCTGTCGTCATATCATCCGAT....................................................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................TTCTGGAAGGCCACACCCTTGTC....................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................TCTGGAAGGCCACACCCTTT......................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................GTCGAATCAGGTGCTAAAATTGGTCA.........................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............GAACGTGGCCATTGAGGTGAAT........................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
......................CATTGAGGTGAATCCCGTGTC................................................................................................................................................................	21	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................TGCTAAAATTGGTCAGCGATTTT-CG..............................................................................................................................	25	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................TATCATCCGATGATCCGAGCTTCTGG.....................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........GATGAACGTGGCCATTGAGGT............................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
..............................................................................................................................TCATCCGATGATCCGAGCTTCTGGAAG..................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................GATGATCCGAGCTTCTGGAAGGC................................................	23	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................GTGAATCCCGTGTCGAATC...........................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

TGGTTAAGAAACTGAATGTGGCCATCGAGGTGAATCCTTTGTCGAATCAAGTGCTCAAGCTGGTCAGCGATTTC-CGTAACCATCCGTGCTCTCAGTTCTTCGCCGACGGCTATCCGGTCATCATCTCATCCGATGATCCCAGCTTCTGGAAGGCCACGCCCCTCTCGCACGACTATTACATCGCCTTCCTGGGAATCGCCTC	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
.......................................................................................................................................GATCCCAGCTTCTGGAAGGC................................................	20	1	2.00	2	1	0	0	0	0	1
..................................................................................................................................................CTGGAAGGCCACGCCCCTCTC....................................	21	1	1.00	1	1	0	0	0	0	0
...............................................................TCAGCGATTTC-CGTAACCATCCGTG..................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................................................GAAGGCCACGCCCCTCTCGCAC................................	22	1	1.00	1	1	0	0	0	0	0
..............................................................GTCAGCGATTTC-CGTAACCATCCGT...................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................TTCTGGAAGGCCACGCCCCTCTC....................................	23	1	1.00	1	1	0	0	0	0	0
...........CTGAATGTGGCCATCGAGGT............................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1
..........................................CGAATCAAGTGCTCAAGCTG.............................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
..............................................................................................................CTATCCGGTCATCATCTCATCC.......................................................................	22	1	1.00	1	1	0	0	0	0	0
..GTTAAGAAACTGAATGTGGCCATC.................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................................CCACGCCCCTCTCGCACGAC.............................	20	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................................................ATCGCCTTCCTGGGAATCG....	19	1	1.00	1	1	0	0	0	0	0
......................CATCGAGGTGAATCCTTTGTCGA..............................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0
....................................................................................................TCGCCGACGGCTATCCGGT....................................................................................	19	1	1.00	1	1	0	0	0	0	0
.......................................................................................................................................GATCCCAGCTTCTGGAAGGCCACGC...........................................	25	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................................ATGATCCCAGCTTCTGGAAGGC................................................	22	1	1.00	1	0	0	0	0	0	1
..GTTAAGAAACTGAATGTGGCC....................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................TCATCCGATGATCCCAGCTTCTGGAAG..................................................	27	1	1.00	1	1	0	0	0	0	0
.......................................................................................................................................GATCCCAGCTTCTGGAAGGCCAC.............................................	23	1	1.00	1	0	0	0	0	0	1
........................................................................................................CGACGGCTATCCGGTCAT.................................................................................	18	1	1.00	1	1	0	0	0	0	0
.............................................ATCAAGTGCTCAAGCTGGTCAGCGAT....................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
...........................................................CTGGTCAGCGATTTC-CGTAAC..........................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
.......................................................................................................................CATCATCTCATCCGATGATCCCAGCTT.........................................................	27	1	1.00	1	1	0	0	0	0	0
.......................................................................................................................................GATCCCAGCTTCTGGAAGGCC...............................................	21	1	1.00	1	1	0	0	0	0	0
....................................CTTTGTCGAATCAAGTGCTCAAG................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	1
....................................................GCTCAAGCTGGTCAGCGATTTC-CGT.............................................................................................................................	25	1	1.00	1	0	0	0	0	0	1

droGri2

TGGTCAAGAAATTGAATGTAGCTATCGAAGTGAATCCCGTATCGAATCAGGTGTTGCAATTGATCAGTGATTTC-CGTAATCATCCCTGCTCACAATTCTTTGCTGATGGCTATCCAGTTGTCATATCCTCCGATGATCCATCATTCTGGAAGGCCACTCCATTGACGCACGACTATTACATTGCTTTCCTGGGCATTGCCTC	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
...............................................................................................................................................ATTCTGGAAGGCCACTCCATTGA.....................................	23	2	0.50	1	1	0
.................................................................................................................................................................ATTGACGCACGACTATTACATTGCTTTCC.............	29	2	0.50	1	1	0

droAna3

TGCTCAAGAGACTGAATGTGGCCATTGAGGTGAACCCGATCTCCAACCAGGTGCTGCAGCTGATCACGGACTTC-CGGAATCATCCCTGTTCCCACTTCTTCGCTGATGGCTATCCTGTGGTGATCTCCTCAGACGATCCATCCTTCTGGAAGGCCACTCCCTTGACTCATGACTTCTACATCGCCTACTTGGGCATCGCCTC	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
...........................................................................................................................ATCTCCTCAGACGATCCATC............................................................	20	1	2.00	2	0	1	1	0	0	0
...................GGCCATTGAGGTGAACCCGATCTC................................................................................................................................................................	24	1	2.00	2	2	0	0	0	0	0
....CAAGAGACTGAATGTGGC.....................................................................................................................................................................................	18	1	2.00	2	0	2	0	0	0	0
.........GACTGAATGTGGCCATTGAGGT............................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................CTCCTCAGACGATCCATCCTTCTG......................................................	24	1	1.00	1	0	0	1	0	0	0
...................................................................................................TTCGCTGATGGCTATCCTGTGGT.................................................................................	23	1	1.00	1	1	0	0	0	0	0
.GCTCAAGAGACTGAATGTGGCC....................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
....CAAGAGACTGAATGTGGCC....................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0
...........................................................................................................................................................CACTCCCTTGACTCATGACTTCTA........................	24	1	1.00	1	0	1	0	0	0	0
.................................................................................................................................................TCTGGAAGGCCACTCCCTTGACTC..................................	24	1	1.00	1	0	1	0	0	0	0
................................................................................TCATCCCTGTTCCCACTTCTTCGCT..................................................................................................	25	1	1.00	1	0	1	0	0	0	0
........................................................................................................................GTGATCTCCTCAGACGATCCA..............................................................	21	1	1.00	1	0	0	1	0	0	0
......................................................TGCAGCTGATCACGGACT...................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0
........................................CTCCAACCAGGTGCTGCAGCT..............................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
................................................................................................................................CTCAGACGATCCATCCTTCTGGAAGGC................................................	27	1	1.00	1	0	1	0	0	0	0
......................................................................CTTC-CGGAATCATCCCTGTTCCCA............................................................................................................	24	1	1.00	1	0	1	0	0	0	0
..................................................................................................CTTCGCTGATGGCTATCCTGTGGT.................................................................................	24	1	1.00	1	1	0	0	0	0	0
.........................................................................................................GATGGCTATCCTGTGGTG................................................................................	18	1	1.00	1	1	0	0	0	0	0
...TCAAGAGACTGAATGTGGCC....................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1	0
...................................................................GGACTTC-CGGAATCATCCCT...................................................................................................................	20	1	1.00	1	0	0	1	0	0	0
............................................................................................................................................ATCCTTCTGGAAGGCCACT............................................	19	1	1.00	1	0	1	0	0	0	0
.......................................................................................TGTTCCCACTTCTTCGCTGATGG.............................................................................................	23	1	1.00	1	1	0	0	0	0	0
.GCTCAAGAGACTGAATGC........................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0
................................................................................................................ATCCTGTGGTGATCTCCTCA.......................................................................	20	1	1.00	1	0	1	0	0	0	0
.................................................................................CATCCCTGTTCCCACTTCTTCGCT..................................................................................................	24	1	1.00	1	0	1	0	0	0	0
......................................................................................................................................................AAGGCCACTCCCTTGACTCATGA..............................	23	1	1.00	1	1	0	0	0	0	0
.........GACTGAATGTGGCCATTGAG..............................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1
.GCTCAAGAGACTGAATGTGGC.....................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
.......................................................................................................................................GATCCATCCTTCTGGAAGGCC...............................................	21	1	1.00	1	0	1	0	0	0	0
...............................................................................................................TATCCTGTGGTGATCTCCTC........................................................................	20	1	1.00	1	0	1	0	0	0	0
...............................................................................ATCATCCCTGTTCCCACTTCTTCGCT..................................................................................................	26	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................GACGATCCATCCTTCTGGAAGGC................................................	23	1	1.00	1	0	1	0	0	0	0
..................................................................................................CTTCGCTGATGGCTATCCC......................................................................................	19	1	1.00	1	0	1	0	0	0	0
...........................................CAACCAGGTGCTGCAGCTGATCAC........................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0

droBip1

TGCTCAAGAGACTGAATGTGGCCATCGAGGTCAACCCAATCTCCAACCAGGTGCTGCAGTTGATTACAGACTTC-CGGAATCATCCGTGCGCCCACTTCTTCGCCGACGGCTATCCAGTGGTGATCTCATCGGACGATCCATCCTTCTGGAAGGCGACCCCGCTGACCCATGACTTCTACATCGCCTACTTGGGCATCGCTTC	Size	Hit Count	Total Norm	Total
No Reads

droKik1

TGCTGAAGAAGCTGAATGTGGCCATTGAGGTCAACCCAATCTCGAATCAGGTGCTCCAGCTGGTCACGGACTTC-CGGAACCATCCCTGCTCCCACTACTTTGCCGATGGTTATCCAGTGGTGATCTCTTCGGATGATCCATCCTTCTGGAAGGCCACACCCTTGAGCCATGACTTTTACATTGCCTTCCTGGGCATTGCCTC	Size	Hit Count	Total Norm	Total
No Reads

droFic1

TGCTGAAGCGACTGAACGTGGCCATCGAGGTGAACCCGATTTCGAACCAGGTGCTCCAGCTGGTCACGGACTTC-CGCAACCACCCGTGCTCGCACTTCTTCGCCGACGGCTATCCCGTGGTCATCTCCTCGGACGATCCCTCCTTCTGGAAGGCCACTCCTTTGACGCACGACTTCTACATCGCCTTCCTGGGAATCGCCTC	Size	Hit Count	Total Norm	Total
No Reads

droEle1

TGCTGAAGAAACTGAACGTGGCCGTTGAGGTCAACCCGATTTCGAATCAGGTGCTCCAGCTGGTCACCGACTTC-CGCAACCATCCGTGCTCGCACTTCTTTGCCGATGGCTATCCGGTGGTCATTTCCTCGGACGATCCGTCCTTCTGGAAGGCCACGCCCCTGACGCACGACTTCTACATTGCCTTTTTGGGAATTGCCTC	Size	Hit Count	Total Norm	Total
No Reads

droRho1

TGCTGAAGAAACTGAATGTGGCCATCGAAGTGAACCCGATTTCGAATCAGGTGCTCCAGCTGGTCACGGACTTC-CGCAACCATCCCTGCTCGCACTTCTTCGCCGATGGGTATCCGGTGGTTATCTCCTCGGACGATCCGTCCTTCTGGAAGGCCACCCCGCTGACGCACGACTTCTACATTGCCTTTTTGGGAATCGCCTC	Size	Hit Count	Total Norm	Total
No Reads

droBia1

TGCTGAAGAGGCTGAATGTGGCCATCGAGGTGAACCCGATCTCGAACCAGGTGCTGCAGTTGGTCACGGACTTC-CGCAACCACCCGTGCGCCCACTTCTTCGCCGACGGCTATCCGGTGGTCATCTCCTCGGACGATCCCTCCTTCTGGAAGGCCACGCCCCTGACGCACGACTTCTACATTGCCTTTCTGGGAATCGCCTC	Size	Hit Count	Total Norm	Total
No Reads

droTak1

TGCTGAAGAAGCTGAATGTGGCCATCGAGGTGAACCCCATATCGAATCAGGTGCTGCAGCTGGTCACGGACTTC-CGCAACCATCCGTGCTCGCACTTCTTCGCCGACGGCTATCCGGTGGTCATTTCCTCGGACGATCCCTCCTTCTGGAAGGCCACGCCCCTGACGCACGACTTCTATATCGCCTTCCTGGGCATCGCCTC	Size	Hit Count	Total Norm	Total
No Reads

droEug1

TGCTGAAGAAACTGAATGTGGCCATTGAGGTCAGCCCCATTTCGAATCAGGTGCTTCAGTTGGTCACGGACTTC-CGGAACCACCCGTGCTCCCACTTCATAGCCGATGGCTATCCGGTGGTTATTTCCTCGGATGATCCCTCCTTCTGGAAGGCCACGCCCCTCTCGCACGATTTCTATATCGCTTTTCTGGGAATAGCCTC	Size	Hit Count	Total Norm	Total
No Reads

dm3

TGCTGAAAAAGCTGAATGTGGCCATTGAAGTGAATCCGATTTCGAATCAAGTGCTCCAGCTGGTCTCTGACTTC-CGCAACCATCCGTGCTCTCACTTCTTCGCCGATGGCTATCCAGTGGTTATATCCTCGGATGATCCCTCCTTCTGGAAAGCCACTCCCCTGACGCATGACTTCTATATCGCCTTCTTAGGAATCGCCTC	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.......................................................................................................................GGTTATATCCTCGGATGATC................................................................	20	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................TCTATATCGCCTTCTTAGGAATCGCC..	26	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................CTCTCACTTCTTCGCCGATGGCT...........................................................................................	23	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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................................................................................................................................................TTCTGGAAAGCCACTCCCCTGACGCAT................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................TATATCGCCTTCTTAGGAATCGCCTC	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................GATTTCGAATCAAGTGCTCCAG................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................CCTTCTGGAAAGCCACTCCCCT.......................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................TGGTTATATCCTCGGATGATCCCTCC...........................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................ATCAAGTGCTCCAGCTGGTCTCTGACTT..................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................TTTCGAATCAAGTGCTCCAGCTGGTT..........................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................TCCCTCCTTCTGGAAAGC................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSim2

TGCTGAAAAAGCTGAATGTGGCCATTGAAGTGAACCCGATTTCAAATCAAGTGCTCCAGCTGGTCTCTGACTTC-CGCAACCATCCGTGCTCCCACTTCTTCGCCGATGGCTATCCAGTGGTTATATCCTCGGATGATCCCTCCTTCTGGAAGGCCACTCCCCTGTCGCACGACTTCTATATCGCCTTCCTAGGAATCGCCTC	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
...........CTGAATGTGGCCATTGAAGTGAACCC......................................................................................................................................................................	26	1	2.00	2	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
............TGAATGTGGCCATTGAAGTGAACCC......................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................AAGTGCTCCAGCTGGTCTCT.......................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
....GAAAAAGCTGAATGTGGCCATTGAAGT............................................................................................................................................................................	27	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
..............AATGTGGCCATTGAAGTGAAA........................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
...............................................................................................................................CCTCGGATGATCCCTCCTTCTGGAAGGC................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..CTGAAAAAGCTGAATGTG.......................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
.......AAAGCTGAATGTGGCCATTGAAGT............................................................................................................................................................................	24	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................GGTTATATCCTCGGATGATCCCTC............................................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................TTCAAATCAAGTGCTCCAGCTGGT...........................................................................................................................................	24	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
..............AATGTGGCCATTGAAGTGAACCCG.....................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................GTTATATCCTCGGATGATCCCC.............................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................TATATCCTCGGATGATCCCTCCTTC........................................................	25	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................TCTGGAAGGCCACTCCCCTGTC....................................	22	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................ATATCCTCGGATGATCCCTCCTTCTGGAA...................................................	29	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......AAAGCTGAATGTGGCCATTGAA..............................................................................................................................................................................	22	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................TCTATATCGCCTTCCTAGGA........	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............GAATGTGGCCATTGAAGTGA..........................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0

droSec2

TGCTGAAAAAGCTGAATGTGGCCATTGAAGTGAACCCGATTTCGAATCAAGTGCTCCAGCTGGTCTCTGACTTC-CGCAACCATCCGTGCTCCCACTTCTTCGCCGATGGCTACCCAGTGGTTATATCCTCGGATGATCCCTCCTTCTGGAAGGCCACTCCCCTGTCGCACGACTTCTATATCGCCTTCTTAGGAATCGCCTC	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
...........CTGAATGTGGCCATTGAAGTG...........................................................................................................................................................................	21	1	2.00	2	0	1	1	0
.......................................................................................................CCGATGGCTACCCAGTGGT.................................................................................	19	1	1.00	1	0	0	1	0
..........................................................................................................................TATATCCTCGGATGATCCCTCCTT.........................................................	24	1	1.00	1	0	0	1	0
...............ATGTGGCCATTGAAGTGAACCC......................................................................................................................................................................	22	1	1.00	1	0	0	1	0
..................................................................................................................................................................................ATATCGCCTTCTTAGGAAT......	19	1	1.00	1	0	0	1	0
............................................................................................................................TATCCTCGGATGATCCCTCCTTC........................................................	23	1	1.00	1	0	0	1	0
............................................................................................................................TATCCTCGGATGATCCCTCC...........................................................	20	1	1.00	1	0	0	1	0
...........CTGAATGTGGCCATTGAAGTGAACCCG.....................................................................................................................................................................	27	1	1.00	1	0	0	1	0
..................................................................CTGACTTC-CGCAACCATCCGT...................................................................................................................	21	1	1.00	1	0	0	1	0
...........CTGAATGTGGCCATTGAAGT............................................................................................................................................................................	20	1	1.00	1	0	0	1	0
...................................................................................................................CAGTGGTTATATCCTCGGATGATCCC..............................................................	26	1	1.00	1	0	0	0	1
................................................................................................................................CTCGGATGATCCCTCCTTCTG......................................................	21	1	1.00	1	1	0	0	0
.................................ACCCGATTTCGAATCAAGTGCTCC..................................................................................................................................................	24	1	1.00	1	0	0	0	1
........................................................................................................................GTTATATCCTCGGATGATCCCTC............................................................	23	1	1.00	1	0	1	0	0
..............................................................................................................................................................................TTCTATATCGCCTTCTTAGGA........	21	1	1.00	1	0	1	0	0
...............................................................................................................................................CTTCTGGAAGGCCACTCCCCTGT.....................................	23	1	1.00	1	0	0	1	0
................................................................CTCTGACTTC-CGCAACCATCC.....................................................................................................................	21	1	1.00	1	0	0	1	0
......................................................................................GTGCTCCCACTTCTTCGCCGATGGC............................................................................................	25	1	1.00	1	1	0	0	0
...............ATGTGGCCATTGAAGTGAACCCG.....................................................................................................................................................................	23	1	1.00	1	0	0	1	0

droYak3

TGCTGAAAAAGCTGAATGTGGCCATTGAGGTGAACCCGATTTCGAATCAGGTGCTCCAGCTGGTCTCTGACTTC-CGCAACCATCCGTGCTCGCACTTCTTTGCCGATGGCTATCCGGTGGTTATATCCTCGGATGATCCCTCCTTCTGGAAGGCCACTCCCCTGACGCACGACTTCTATATCGCCTTCTTGGGAATCGCCTC	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
.............GAATGTGGCCATTGAGGTGAACCC......................................................................................................................................................................	24	1	4.00	4	0	0	2	2	0	0	0	0	0	0	0
....................................................GCTCCAGCTGGTCTCTGACTTC-CGC.............................................................................................................................	25	1	4.00	4	0	1	3	0	0	0	0	0	0	0	0
..........GCTGAATGTGGCCATTGAGGT............................................................................................................................................................................	21	1	3.00	3	0	0	0	0	0	0	3	0	0	0	0
................................................................CTCTGACTTC-CGCAACCATCCGT...................................................................................................................	23	1	2.00	2	0	1	0	0	0	0	1	0	0	0	0
..................................................................................................................................................CTGGAAGGCCACTCCCCTGACGCAC................................	25	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0
..................................................................CTGACTTC-CGCAACCATCCGT...................................................................................................................	21	1	2.00	2	0	0	1	0	0	0	1	0	0	0	0
....................................................GCTCCAGCTGGTCTCTGAC....................................................................................................................................	19	1	2.00	2	1	0	1	0	0	0	0	0	0	0	0
...........CTGAATGTGGCCATTGAGGT............................................................................................................................................................................	20	1	2.00	2	0	1	0	0	0	0	1	0	0	0	0
.......................................................................................................................................................AGGCCACTCCCCTGACGCACGA..............................	22	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0
.......................................TTTCGAATCAGGTGCTCCAGCT..............................................................................................................................................	22	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0
..............................................................................................................................................CCTTCTGGAAGGCCACTCCCCT.......................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..CTGAAAAAGCTGAATGTGGCCATTGAGGT............................................................................................................................................................................	29	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..........................................................................................................................TATATCCTCGGATGATCCCTC............................................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..................................................................CTGACTTC-CGCAACCATCCGTGCTCGC.............................................................................................................	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.........................................................AGCTGGTCTCTGACTTC-CGC.............................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................CACTCCCCTGACGCACGACTTCTATATC....................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.....................................................................................................................................ATGATCCCTCCTTCTGGAAGG.................................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..................................................................................................................................................CTGGAAGGCCACTCCCCTGA.....................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
....................................CGATTTCGAATCAGGTGCTCCAGCTGGC...........................................................................................................................................	28	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.....................................GATTTCGAATCAGGTGCTC...................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................ATGATCCCTCCTTCTGGAAGGC................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
..............AATGTGGCCATTGAGGTGA..........................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0
.............................................................................CAACCATCCGTGCTCGCAC...........................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...................................................................................................TTTGCCGATGGCTATCCGGT....................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.........................................................................C-CGCAACCATCCGTGCTCG..............................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
............................................................................................GCACTTCTTTGCCGATGGCT...........................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................GCCACTCCCCTGACGCACGAC.............................	21	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0
......................................................................................GTGCTCGCACTTCTTTGCCGAT...............................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..........................GAGGTGAACCCGATTTCGA..............................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
................TGTGGCCATTGAGGTGAACCC......................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................CGCACGACTTCTATATCGCCTTCTTGGGA........	29	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................CTGGAAGGCCACTCCCCTGAC....................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...........................................................CTGGTCTCTGACTTC-CGCAACCATCCGT...................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.............................................................................................................................................................................CTTCTATATCGCCTTCTTGGGA........	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
............................................................................GCAACCATCCGTGCTCGCACTTCTT......................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................CACTCCCCTGACGCACGAC.............................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...............ATGTGGCCATTGAGGTGAACCC......................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
............................GGTGAACCCGATTTCGAATC...........................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..........................................................................................................................TATATCCTCGGATGATCCC..............................................................	19	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................GGATGATCCCTCCTTCTGGAAGGC................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
............................................................................................................................................................ACTCCCCTGACGCACGACTT...........................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..............AATGTGGCCATTGAGGTGAACCC......................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
............TGAATGTGGCCATTGAGGTGAACCC......................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..............AATGTGGCCATTGAGGTGAACCCGA....................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.........AGCTGAATGTGGCCATTGAGGTGAACCCG.....................................................................................................................................................................	29	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................GACTTCTATATCGCCTTCTTGGGA........	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
......................CATTGAGGTGAACCCGAT...................................................................................................................................................................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................GATGATCCCTCCTTCTGGAA...................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................CACTCCCCTGACGCACGACTTCTA........................	24	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
......AAAAGCTGAATGTGGCCATTGAGGT............................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
................................................................................................TTCTTTGCCGATGGCTATCCGGTGG..................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................GGTTATATCCTCGGATGATC................................................................	20	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................GCACGACTTCTATATCGCCTTCTTGGGA........	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
....GAAAAAGCTGAATGTGGCCATTGAGGT............................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...........................................................................................................................................................................GACTTCTATATCGCCTTCTTGGGAATC.....	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
............................................AATCAGGTGCTCCAGCTGGTCT.........................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
........................................................................................................................GTTATATCCTCGGATGATCCCTC............................................................	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.............................................................................................CACTTCTTTGCCGATGGCTATCC.......................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
............TGAATGTGGCCATTGAGGT............................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..................................................................................................................................................................................ATATCGCCTTCTTGGGAAT......	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..............................................................................AACCATCCGTGCTCGCACTTCTTTGC...................................................................................................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
..................................................GTGCTCCAGCTGGTCTCTGA.....................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................GGTTATATCCTCGGATGATCCCTCCTT.........................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
................TGTGGCCATTGAGGTGAACCCGA....................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................TCTATATCGCCTTCTTGGGA........	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
....................................................................................................TTGCCGATGGCTATCCGGTGGTTAT..............................................................................	25	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
........................................................................................................................................................GGCCACTCCCCTGACGCACGACTT...........................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
...........CTGAATGTGGCCATTGAGGTGA..........................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
........AAGCTGAATGTGGCCATTGAGGTGAA.........................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.....................................................................................................................................................GAAGGCCACTCCCCTGACG...................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
........AAGCTGAATGTGGCCATTGAGGTGAACCC......................................................................................................................................................................	29	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
............................................................................................GCACTTCTTTGCCGATGGCTATCCGGTGG..................................................................................	29	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
......................................................................................GTGCTCGCACTTCTTTGCC..................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................TATATCCTCGGATGATCCCTCCTT.........................................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
..CTGAAAAAGCTGAATGTGGC.....................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
..................................CCCGATTTCGAATCAGGTG......................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.....................................GATTTCGAATCAGGTGCTCCAGCT..............................................................................................................................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
..............................................TCAGGTGCTCCAGCTGGTCTCTGAC....................................................................................................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
....................................................GCTCCAGCTGGTCTCTGACT...................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.................................................................................CATCCGTGCTCGCACTTCTTTGC...................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..................................................................................................CTTTGCCGATGGCTATCCGGT....................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...........CTGAATGTGGCCATTGAGGTGAAC........................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
................................................................................................................................................................................CTATATCGCCTTCTTGGGAATC.....	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................CGGATGATCCCTCCTTCTGGAAGGC................................................	25	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.........AGCTGAATGTGGCCATTGAG..............................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.....................................................CTCCAGCTGGTCTCTGACTTC-CGC.............................................................................................................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0

droEre2

TGCTGAAAAAACTGAATGTGGCCATTGAGGTCAACCCGATTTCGAATCAGGTGCTCCAGCTGGTCTCTGACTTC-CGCAACCATCCGTGCTCGCACTTCTTTGCCGATGGCTATCCGGTGGTCATATCCTCCGATGATCCCTCCTTCTGGAAGGCCACTCCCCTCTCGCACGACTTCTATATCGCCTTCTTGGGAATCGCCTC	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
................................................................................................................................................................................CTATATCGCCTTCTTGGGAATCGCCTC	27	1	2.00	2	1	1	0	0	0	0	0
..............................................................................................................................................................................TTCTATATCGCCTTCTTGGGAATCGC...	26	1	1.00	1	0	0	1	0	0	0	0
...............................................................................................CTTCTTTGCCGATGGCTATCCGGTGGT.................................................................................	27	1	1.00	1	1	0	0	0	0	0	0
....................................................GCTCCAGCTGGTCTCTGACTTC-................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0
....................................................GCTCCAGCTGGTCTCTGAC....................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0
...........................................................................................................................................................................GACTTCTATATCGCCTTCTTGGGA........	24	1	1.00	1	0	0	0	0	0	1	0
......................................................................CTTC-CGCAACCATCCGTGCTCGCACTT.........................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0
....GAAAAAACTGAATGTGGCCATTGA...............................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0
........................................................................................................................................................GGCCACTCCCCTCTCGCACGAC.............................	22	1	1.00	1	0	1	0	0	0	0	0
.............................................................................................................................................................CTCCCCTCTCGCACGACTTCT.........................	21	1	1.00	1	0	0	0	0	0	1	0
........AAACTGAATGTGGCCATTGAGGTC...........................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0
..................................................................................................CTTTGCCGATGGCTATCCGGT....................................................................................	21	1	1.00	1	0	1	0	0	0	0	0
TGCTGAAAAAACTGAATGTGGC.....................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	1	0
......................................................................CTTC-CGCAACCATCCGTGCTCGCACT..........................................................................................................	26	1	1.00	1	0	0	0	1	0	0	0
....................................................................................................................................GATGATCCCTCCTTCTGGAA...................................................	20	1	1.00	1	1	0	0	0	0	0	0
....................................................................................................................................................................CTCGCACGACTTCTATATC....................	19	1	1.00	1	0	1	0	0	0	0	0
........................................................................................................................................................GGCCACTCCCCTCTCGCACGACTT...........................	24	1	1.00	1	0	1	0	0	0	0	0
..........................................................................................................................CATATCCTCCGATGATCCCTC............................................................	21	1	1.00	1	0	1	0	0	0	0	0
...............................................................................................................................................CTTCTGGAAGGCCACTCCCCTC......................................	22	1	1.00	1	0	0	0	0	0	1	0
.......AAAACTGAATGTGGCCATTGAGGTC...........................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0
........AAACTGAATGTGGCCATTGAGGTCAACCC......................................................................................................................................................................	29	1	1.00	1	0	1	0	0	0	0	0

dpe_2166

scaffold_9:2070118-2070220 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-22.1	-21.6	-21.1