ID:

dpe_2128

 Coordinate:

scaffold_87:114877-115027 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.4 -8.4 -8.3

Flybase annnotation

exon [dper_GLEANR_18521:1]; CDS [Dper\GL16685-cds]; intron [Dper\GL16685-in]

Repeatable elements

NameClassFamilyStrand
Gypsy10-I_Dpse-intLTRGypsy-
Helitron-1N1_DVirRCHelitron+
mature
  1. scaffold_771:3896-3918 +
  2. scaffold_175:58479-58501 +
  3. scaffold_1066:5447-5469 +
  4. scaffold_0:11756194-11756216 +
  5. scaffold_3:17109-17131 +
  6. dpe_2128  scaffold_87:114915-114937 +
  7. scaffold_569:3402-3424 +
  8. scaffold_983:4461-4483 +
  9. scaffold_850:4011-4033 +
  10. scaffold_3571:1140-1162 +
  11. scaffold_1080:5022-5044 +
  12. scaffold_1561:2216-2238 +
  13. scaffold_4061:415-437 +
  14. scaffold_4078:688-710 +
  15. scaffold_1653:4275-4297 +
  16. scaffold_1926:3642-3664 +
  17. scaffold_6919:738-760 +
  18. scaffold_543:10417-10439 +
  19. scaffold_223:30975-30997 +
  20. scaffold_232:23496-23518 +
  21. scaffold_455:12658-12680 +
  22. scaffold_0:11795044-11795066 +
  23. scaffold_1140:7155-7177 +
  24. scaffold_578:382-404 +
  25. scaffold_669:9297-9319 +
  26. scaffold_3471:1643-1665 +
  27. scaffold_1122:2315-2337 +
  28. scaffold_3649:1428-1450 +
  29. scaffold_4174:1525-1547 +
  30. scaffold_4370:258-280 +
  31. scaffold_5315:546-568 +
  32. scaffold_230:12179-12201 +
  33. scaffold_661:9689-9711 +
  34. scaffold_2557:1218-1240 +
  35. scaffold_6652:1543-1565 +
star
  1. dpe_2128  scaffold_87:114997-115022 +
  2. scaffold_4174:1607-1632 +
  3. scaffold_1718:1218-1243 -

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TAATCCCAAACTATTAAAACTTTGGATGTCGGATAATTCAACGACGGCGGGTTCAGGATATTTGAATCCCAAACTATTGACGGATAATTCTTCGTCGGCGTGCTCAGGATTTTTTGATCCCAAGCTATATAAACTTCCTTCTACCTTTACTGAATCACTTTTCATTTCTTTTTCTTCTTCAAAATATTTTTATACCCGATACTCAAAATGAGTATTGGGGTATATTAGATTTGTGGTAAAAGTGGATGTGT
****************************************************************************************.............(((..(((((....)))))..))).........................((((......))))................................******************************************************* 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V111
male body		 V042
embryo
........................................................................................TCTTCGTCGGCGTGCTCAGGATT............................................................................................................................................ 23 0 20 3.15 63 57 4 0 2
........................................................................................TCTTCGTCGGCGTGCTCAGGATTTTT......................................................................................................................................... 26 0 20 2.95 59 59 0 0 0
............................TCGGATAATTCAACGACGGCGGGT....................................................................................................................................................................................................... 24 0 20 1.25 25 24 1 0 0
.................................TAATTCAACGACGGCGGGTTCAG................................................................................................................................................................................................... 23 0 20 1.00 20 20 0 0 0
.................................TAATTCAACGACGGCGGGTTCA.................................................................................................................................................................................................... 22 0 20 0.95 19 19 0 0 0
.................................TAATTCAACGACGGCGGGTTC..................................................................................................................................................................................................... 21 0 20 0.50 10 10 0 0 0
..................................AATTCAACGACGGCGGGTTCAGGA................................................................................................................................................................................................. 24 0 20 0.35 7 7 0 0 0
....................................................................................TAATTCTTCGTCGGCGTGCTCAGGAT............................................................................................................................................. 26 0 20 0.35 7 7 0 0 0
....................................................................................TAATTCTTCGTCGGCGTGCTCAGG............................................................................................................................................... 24 0 20 0.35 7 7 0 0 0
........................................................................................TCTTCGTCGGCGTGCTCAGGA.............................................................................................................................................. 21 0 20 0.35 7 3 4 0 0
..........................................................................................................................................................................TTTCTTCTTCAAAATATTTTTATACC....................................................... 26 0 3 0.33 1 1 0 0 0
..........................TGTCGGATAATTCAACGACGGCGG......................................................................................................................................................................................................... 24 0 20 0.30 6 6 0 0 0
..........................................................................................TTCGTCGGCGTGCTCAGGATTTTT......................................................................................................................................... 24 0 20 0.30 6 6 0 0 0
.................................TAATTCAACGACGGCGGGTTCAA................................................................................................................................................................................................... 23 1 20 0.30 6 6 0 0 0
.........................................................................................CTTCGTCGGCGTGCTCAGGAT............................................................................................................................................. 21 0 20 0.25 5 5 0 0 0
.........................................................................................CTTCGTCGGCGTGCTCAGGATTTTT......................................................................................................................................... 25 0 20 0.25 5 5 0 0 0
............................TCGGATAATTCAACGACGGCGGG........................................................................................................................................................................................................ 23 0 20 0.25 5 4 1 0 0
..........................................................TATTTGAATCCCAAACTATTGACGGA....................................................................................................................................................................... 26 0 20 0.25 5 5 0 0 0
..................................AATTCAACGACGGCGGGTTCAGG.................................................................................................................................................................................................. 23 0 20 0.25 5 5 0 0 0
..................................................................................................................................................................................................................AGTATTGGGGTATATTAGATT.................... 21 0 20 0.25 5 0 0 5 0
.............................CGGATAATTCAACGACGGCGGGT....................................................................................................................................................................................................... 23 0 20 0.20 4 4 0 0 0
....................................................TCAGGATATTTGAATCCCAAACTAT.............................................................................................................................................................................. 25 0 20 0.20 4 4 0 0 0
........................................................................................TCTTCGTCGGCGTGCTCAGG............................................................................................................................................... 20 0 20 0.20 4 4 0 0 0
.............................................................................TGACGGATAATTCTTCGTCGGC........................................................................................................................................................ 22 0 20 0.20 4 4 0 0 0
.................................TAATTCAACGACGGCGGGTTCAGGAT................................................................................................................................................................................................ 26 0 20 0.20 4 4 0 0 0
...........................................................................ATTGACGGATAATTCTTCGTCGGC........................................................................................................................................................ 24 0 20 0.15 3 3 0 0 0
........................................................................................TCTTCGTCGGCGTGCTCAGGATTTTAA........................................................................................................................................ 27 2 20 0.15 3 0 3 0 0
.........................................................................................CTTCGTCGGCGTGCTCAGGATTTTAA........................................................................................................................................ 26 2 20 0.15 3 0 3 0 0
.............................................................................TGACGGATAATTCTTCGTCGGCGT...................................................................................................................................................... 24 0 20 0.15 3 2 1 0 0
.....................................TCAACGACGGCGGGTTCAGGAT................................................................................................................................................................................................ 22 0 20 0.10 2 2 0 0 0
..........................................................................................TTCGTCGGCGTGCTCAGGATTTT.......................................................................................................................................... 23 0 20 0.10 2 2 0 0 0
..........................................................................................TTCGTCGGCGTGCTCAGGATTT........................................................................................................................................... 22 0 20 0.10 2 2 0 0 0
.............................................................................................................................TATATAAACTTCCTTCTACCTTTACT.................................................................................................... 26 0 20 0.10 2 1 0 0 1
...............................................................................................................TTTTGATCCCAAGCTATATAAACT.................................................................................................................... 24 0 20 0.10 2 2 0 0 0
........................................................................................TCTTCGTCGGCGTGCTCAGGATTT........................................................................................................................................... 24 0 20 0.10 2 0 2 0 0
...........................................................................ATTGACGGATAATTCTTCGTCGG......................................................................................................................................................... 23 0 20 0.10 2 2 0 0 0
.............................................................................................................TTTTTTGATCCCAAGCTATATAAACT.................................................................................................................... 26 0 20 0.10 2 0 2 0 0
.................................................................................................................................TAAACTTCCTTCTACCTTTACTG................................................................................................... 23 0 20 0.10 2 2 0 0 0
....................................................................................TAATTCTTCGTCGGCGTGCTC.................................................................................................................................................. 21 0 20 0.10 2 0 2 0 0
................................ATAATTCAACGACGGCGGGTTCAG................................................................................................................................................................................................... 24 0 20 0.10 2 2 0 0 0
..................................................................TCCCAAACTATTGACGGATAATTC................................................................................................................................................................. 24 0 20 0.10 2 2 0 0 0
................................................................................................................TTTGATCCCAAGCTATATAAACTTCCT................................................................................................................ 27 0 20 0.10 2 2 0 0 0
.....................................................................................................................TCCCAAGCTATATAAACTTCCTTC.............................................................................................................. 24 0 20 0.10 2 2 0 0 0
....................................................................................TAATTCTTCGTCGGCGTGCTCAGGATTT........................................................................................................................................... 28 0 20 0.10 2 2 0 0 0
.................................TAATTCAAAGACGGCGGGTTCAGGA................................................................................................................................................................................................. 25 1 20 0.10 2 2 0 0 0
.................................TAATTCAACGACGGCGGG........................................................................................................................................................................................................ 18 0 20 0.10 2 0 2 0 0
..............................................................................................................TTTTTGATCCCAAGCTATATAAACT.................................................................................................................... 25 0 20 0.10 2 2 0 0 0
...............................................................................................................................TATAAACTTCCTTCTACCTTTACTGAA................................................................................................. 27 0 20 0.10 2 2 0 0 0
............................TCGGATAATTCAACGACGGCGGGG....................................................................................................................................................................................................... 24 1 20 0.10 2 2 0 0 0
..........................................................................................TTCGTCGGGGTGCTCAGGATTT........................................................................................................................................... 22 1 20 0.05 1 1 0 0 0
..............................................................................................TCGGCGTGCTCAGGATTTTTTG....................................................................................................................................... 22 0 20 0.05 1 1 0 0 0
.............................................................................................................................TATATAAACTTCCTTCTACCTTTAC..................................................................................................... 25 0 20 0.05 1 1 0 0 0
........................................................................................TCTTCGTCGGCGTGCTCA................................................................................................................................................. 18 0 20 0.05 1 1 0 0 0
..............................................GCGGGTTCAGGGGATGTGA.......................................................................................................................................................................................... 19 3 20 0.05 1 0 0 1 0
........................................................................................TCTTCGTCGGCGTGCTCAGGG.............................................................................................................................................. 21 1 20 0.05 1 0 1 0 0
............................................................................TTGACGGATAATTCTTCGTCGGCGT...................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0
........................................................................................TCTTCGTCGGCGTGCTCAGGAA............................................................................................................................................. 22 1 20 0.05 1 1 0 0 0
................................................................................................................................................................................................TACCCGATACTCAAAATGAGTAT.................................... 23 0 20 0.05 1 1 0 0 0
......................................................................................................................................TTCCTTCTACCTTTACTGAATCACTT........................................................................................... 26 0 20 0.05 1 1 0 0 0
..........................................................................................TTCGTCGGCGTGCTCAGGATTTTTT........................................................................................................................................ 25 0 20 0.05 1 0 0 0 1
....................................................................................TAATTCTTCGTCGGCGTGCTCA................................................................................................................................................. 22 0 20 0.05 1 1 0 0 0
..................................................................TCCCAAACTATTGACGGATAATT.................................................................................................................................................................. 23 0 20 0.05 1 1 0 0 0
..............................GGATAATTCAACGACGGC........................................................................................................................................................................................................... 18 0 20 0.05 1 1 0 0 0
.............................CGGATAATTCAACGACGGCGG......................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0
.....................................TCAACGACGGCGGGTTCAGGATATT............................................................................................................................................................................................. 25 0 20 0.05 1 1 0 0 0
.....................................................................CAAACTATTGACGGATAATTCTTCGTC........................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0
.........................................................................CTATTGACGGATAATTCTTCGT............................................................................................................................................................ 22 0 20 0.05 1 0 0 1 0
............................................................................TTGAAGGATAATTCTTCGTCGGCG....................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0
...................................................................CCCAAACTATTGACGGATAATT.................................................................................................................................................................. 22 0 20 0.05 1 1 0 0 0
.................................TAATTCAACGACGGCGGGTTCAAAA................................................................................................................................................................................................. 25 2 20 0.05 1 1 0 0 0
.....................................................................................AATTCTTCGTCGGCGTGCTCAGGATT............................................................................................................................................ 26 0 20 0.05 1 1 0 0 0
............................TAGGATAATTCAACGACGGCGGGA....................................................................................................................................................................................................... 24 2 20 0.05 1 0 0 1 0
...........TATTAAAACTTTTGATGTAGGATAAT...................................................................................................................................................................................................................... 26 2 20 0.05 1 0 0 1 0
...................................................TTCAGGATATTTGAATCCCAAACTA............................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0
.........................................................................CTATTGACGGATAATTCTTCGTCGGC........................................................................................................................................................ 26 0 20 0.05 1 1 0 0 0
..........................TGTCGGATAATTCAACGACGGCGGGTG...................................................................................................................................................................................................... 27 1 20 0.05 1 0 0 0 1
..............................................................................................................TTTTTGATCCCAAGCTATATAAACAA................................................................................................................... 26 2 20 0.05 1 1 0 0 0
...........................................................................................................................GCTATATAAACTTCCTTCTACCTTTAC..................................................................................................... 27 0 20 0.05 1 1 0 0 0
....................................................................................TAATTCTTCGTCGGCGTGCTCAGGAA............................................................................................................................................. 26 1 20 0.05 1 0 1 0 0
..................................................................TCCCAAACTATTGACGGATAA.................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0
......................................CAACGACGGCGGGTTCAGG.................................................................................................................................................................................................. 19 0 20 0.05 1 1 0 0 0
.................................TAATTCAACGACGGCGGGTTCAAAAA................................................................................................................................................................................................ 26 3 20 0.05 1 1 0 0 0
.......................................................................................................TCAGGATTTTTTGATCCCAAGCTA............................................................................................................................ 24 0 20 0.05 1 1 0 0 0
.............................................................................................................................................TACCTTTACTGAATCACTTTTCATTTC................................................................................... 27 0 20 0.05 1 1 0 0 0
.......................................................................................TTCTTCGTCGGCGTGCTCAGGAT............................................................................................................................................. 23 0 20 0.05 1 1 0 0 0
....................................................TCAGGATATTTGAATCCCAAACTCTT............................................................................................................................................................................. 26 1 20 0.05 1 1 0 0 0
........................................................................................TCTTCGTCGGCGTGCTCAGGAAA............................................................................................................................................ 23 2 20 0.05 1 1 0 0 0
..............................GGATAATTCAACGACGGCGGGT....................................................................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0
.....................................................................................................................TCCCAAGCTATATAAACTTCCTTCTA............................................................................................................ 26 0 20 0.05 1 1 0 0 0
...........................ATAGGATAATTCAACGACGGCGGGT....................................................................................................................................................................................................... 25 2 20 0.05 1 1 0 0 0
................AAACTTTTGATGTAGGATAATT..................................................................................................................................................................................................................... 22 2 20 0.05 1 0 1 0 0
.....................................................................................................................TCCCAAGCTATATAAACTTCCTTCTAC........................................................................................................... 27 0 20 0.05 1 1 0 0 0
.................................TAATTCAACGACGGCGGGTTCT.................................................................................................................................................................................................... 22 1 20 0.05 1 0 1 0 0
....................TTTTGATGTAGGATAATTCAACGACGG............................................................................................................................................................................................................ 27 2 20 0.05 1 0 0 1 0
.................................................................................GGATAATTCTTCGTCGGCGTGCTCA................................................................................................................................................. 25 0 20 0.05 1 1 0 0 0
.................................................................................................................................TAAACTTCCTTCTACCTTTACTT................................................................................................... 23 1 20 0.05 1 0 1 0 0
.................................................................................................................................TAAACTTCCTTCTACCTTTACTGA.................................................................................................. 24 0 20 0.05 1 1 0 0 0
.............................................................................TGACGGATAATTCTTCGTCGGCGTGC.................................................................................................................................................... 26 0 20 0.05 1 0 0 0 1
.......................................................................................TTCTTCGTCGGCGTGCTCAG................................................................................................................................................ 20 0 20 0.05 1 1 0 0 0
..........................................................................TATTGAAGGATAATTCTTCGTCGGCG....................................................................................................................................................... 26 1 20 0.05 1 0 0 1 0
...........................................................................................TCGTCGGCGTGCTCAGGATTTTTTGATC.................................................................................................................................... 28 0 20 0.05 1 1 0 0 0
..................................................................................................................TGATCCCAAGCTATATAAACTTCC................................................................................................................. 24 0 20 0.05 1 1 0 0 0
.........................ATGTCGGATAATTCAACGACGGC........................................................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0
..........................................................TATTTGAATCCCAAACTATTGAC.......................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0
...........................................................................................TCGTCGGCGTGCTCAGGATTT........................................................................................................................................... 21 0 20 0.05 1 1 0 0 0
........................................................................................TCTTCGTCCGCGTGCTCAGGATTTTT......................................................................................................................................... 26 1 20 0.05 1 1 0 0 0
..............................GGATAATTCAACGACGGCGGG........................................................................................................................................................................................................ 21 0 20 0.05 1 1 0 0 0
....................................TTCAACGACGGCGGGTTCAGGAT................................................................................................................................................................................................ 23 0 20 0.05 1 1 0 0 0
.....................................................................................................................TCCCAAGCTATATAAACTTCCTTCTACCT......................................................................................................... 29 0 20 0.05 1 1 0 0 0
...........TATTAAATCTTTGGATACCG............................................................................................................................................................................................................................ 20 3 20 0.05 1 0 1 0 0
........................................................................................TCTTCGTCGGCGTGCTCAGGATTTT.......................................................................................................................................... 25 0 20 0.05 1 0 0 0 1
.............................................................................................TTCGGCGTGCTCAGGAATT........................................................................................................................................... 19 2 20 0.05 1 1 0 0 0
...........................GTCGGATAATTCAACGACGGC........................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0
..........................................................................................TTCGTCGGCGTGCTCAGGATTTTTAAAA..................................................................................................................................... 28 3 20 0.05 1 1 0 0 0
...............................................................................ACGGATAATTCTTCGTCGGCGTGC.................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0
...........................................................................................TCGTCGGCGTGCTCAGGATTTTTTGA...................................................................................................................................... 26 0 20 0.05 1 1 0 0 0
...........................................................................................................................................TCTACCTTTACTGAATCACTTTTCATT..................................................................................... 27 0 20 0.05 1 1 0 0 0
..........................................................................................TTCGTCGGCGTGCTCAGGATTTTTTG....................................................................................................................................... 26 0 20 0.05 1 1 0 0 0
...............................................................................................................................TATAAACTTCCTTCTACCTTTACTTT.................................................................................................. 26 2 20 0.05 1 1 0 0 0
....................................................................................TAATTCTTTGTCGGCGTGCTCAGGA.............................................................................................................................................. 25 1 20 0.05 1 1 0 0 0
...............................................................................................................................TATAAACTTCCTTCTACCTTTACTGA.................................................................................................. 26 0 20 0.05 1 1 0 0 0
...................................................................CCCAAACTATTGACGGATAATTCTTCGT............................................................................................................................................................ 28 0 20 0.05 1 1 0 0 0
......................................CAACGACGGCGGGTTCAGGA................................................................................................................................................................................................. 20 0 20 0.05 1 1 0 0 0
.........................................................................................CTTCGTCGGCGTGCTCAGGATT............................................................................................................................................ 22 0 20 0.05 1 1 0 0 0
....................................TTCAACGACGGCGGGTTCAGGA................................................................................................................................................................................................. 22 0 20 0.05 1 1 0 0 0
.....................................TCAACGACGGCGGGTTCAGGATA............................................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0
.............................................................................TGACGGATGATTCTTCGTCGGTGTGC.................................................................................................................................................... 26 2 20 0.05 1 1 0 0 0
....................................................TCAGGATATTTGAATCCCAAAGTAT.............................................................................................................................................................................. 25 1 20 0.05 1 1 0 0 0

Anti-sense strand reads

ATTAGGGTTTGATAATTTTGAAACCTACAGCCTATTAAGTTGCTGCCGCCCAAGTCCTATAAACTTAGGGTTTGATAACTGCCTATTAAGAAGCAGCCGCACGAGTCCTAAAAAACTAGGGTTCGATATATTTGAAGGAAGATGGAAATGACTTAGTGAAAAGTAAAGAAAAAGAAGAAGTTTTATAAAAATATGGGCTATGAGTTTTACTCATAACCCCATATAATCTAAACACCATTTTCACCTACACA
*******************************************************.............(((..(((((....)))))..))).........................((((......))))................................**************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
.................................................CCAAGTCCTATAAACTTAGGGT.................................................................................................................................................................................... 22 0 20 0.05 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_87:114827-115077 + dpe_2128 TAATCCCAAACTATT------AAA-ACTTTGGATGTCGGATAATTCAACGACGGCGGGTTCAGGATATTTGAATCCCAAAC---TA--------------------------TTGACGGATAATTCTTCGTCGGCGTGCTCAGGATTT--------------------TTTGATCCCAAGCTATATAAACTTCCTTCTACCTTTACTGAATCACTTTTCA-----------------------------------TTTCTTTTTCTTCTTCAAAATATTT-TTATACCCGATACTC--------AAAAT------------------------------------GAG-TATTGGGGTATATTAGATTTGTGGTAAA-AGTGGATGTGT
dp5 Unknown_singleton_2190:10213-10416 + TAATCCCAAACTATT------AAA-ACTTTGAATGTCGGATAATTCAACGACGGCAGGTTCAGGATATTTGAATCCCAAAC---TA--------------------------TTGACGGATAATTCTTCGTCGGCGTGCTCAGGATTT--------------------TTTGATCCCAAGCTATATAAACTTCCTTCTACCTTTACTGAATCACTTTTCA-----------------------------------TTTCTTTTTCTTCTTCAAAATATTT-TTTTATTATATATTC---------------------------------------------------------------------------------------------
droWil2 scf2_1100000004516:3844175-3844415 + TAATACCAAAATCCA------AAATTAAAGTAT-------TAACTC-----------------AATATGCAAGTTCCATGCATTTGTCCTT-------------AAT-CCCATTAACTGACGCATTA---------TGAACGTCGTCT--------------------TTGTATTC-ATACAGGTTAGGCTTTTTTTGAA---CACACAATATAAATAAA------------------------CTTAT----AAAA----T------------TTTTTT-TTATAAAAAACTTAGAATTTTCCTTTAAATTTATATCTTTTTATACCCTTG------------------CAGAGGGTATTATAAAATTGGT--------CAGATGTTT
droVir3 scaffold_12928:837363-837555 - GGCTAG----------------------------------------------------TTAGAAAATTTTGAATAAAAAGA---AATTCTCTGCTTTTTTTTCGTGA-GCTGTTTAT------------------------GAGATTTTCTAACATATCTGAAGAGCCA------------TAGATCCTT----T--TTGAGTTG------GAATTTTGG-----------------------------------GT------------------------------------------------------TTTCTTTTTTTTATACCCTGAACCA-TTAAAAATGGG-TATGAGGGTATATTGTATTTGTGCGAAA-TCCAAATGTAT
droMoj3 scaffold_4423:8188-8392 + TC-------------------------------------------CGGCGGCGGCGA-----GGGTACTAGAGTCCGACGT---TCAATCC---TC-------------------------AT---TTCGCCTCCGCT-GCAGGATTCC-------------------CTTGACTTTCAGCCTCGAC----------------------------TATAGCTTTCTTCCTTGTTTTTTTTTTTT-TT-TTTTT--TTTTTCTTTTCTTTCCTTCTCCTTT-TTATAC----------------------------------------CCTGAACCCATATTCAATGGGAAATCAGGGTATAATGGTTTTGT---------TAAATGTAT
droGri2 scaffold_15245:14750145-14750309 - CCAAACA-AACAATA------AAC-----------------------------AATTCTTCAGAATGTTTGTA--------------------------------TTATTTATTTTCGTAT-------------------------TT--------------------TTTAATCCA-----------------T--TTCAATTG------AAATTTTTA------------------------------------------------------------------------------------AATACATTTTTTCTTTTTCATTCCCCGAACAAATTGAGAATGGCTAAATTGGGTATAATGAAGTTGTGCAAAA--TTAATAGAGT
droAna3 scaffold_13043:282476-282655 + AATTCCCAATAT-------------------------------------------------------------------------ATTTGT-------------ATT-TTTATTGACGGATATTCCTACGTCGGCGTTCTAAGGATTT--------------------TTCATTCCCAAGCTTTTCTCACAATTTTCAACAAATAATGAATCTGTGTTTT-----------------------------------CTCTACTATTATCATCAAAATATTT-TTATAC----------------------------------------CCTTG------------------CAGAGGGTATTATAATTTTGGT--------CAAAAGTGT
droBip1 scf7180000396501:9648-9845 + TTAA-----------------------AATTTATGACAGATAAATCGTCGACGGCGCGTTTGCGATTTCTTGATCCCAAAC---CTTTTAC-------------TTT-TTTGTTGACGGATAATTTTTCGTCGGCGTGCTCAGGATTT--------------------GTAGATCCCAAGCTTAATAAACTGTTT--TTCAACCACAGATTCTGGTTGGA-----------------------------------TTTCTTTTTCCTCATCAAAGTATTT-TTTTATTATATACTC---------------------------------------------------------------------------------------------
droKik1 scf7180000302275:6297-6470 - ACATTCCAAACGATTTTTATTTAT-TTGATTTTTGACGGTATTTTCTTCGTGGGCACTCTCAGGATTTTCGAATCCCAAGA---TATTGGT-------------ATT-TTTATTGTCGGATATTTCTACGCCGGCGTTCTCAGGATTT--------------------TCGAATCTCAAGCTTTTCTCACTATTTTCCACAAATAATGAATC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000453394:10218-10373 + AGATCCCAAGCT-------------------------------------------------------------------------TTTTTT----------TAATTT-TTTGTTGACGGATAATTCTACGTCGGCGTGCTCAGGATTT--------------------GTAGATCCCAAGCTGAATGAACTTTTTTCAACCATTACAGATTCTGGTTGGA-----------------------------------TTTCTTTTTGCTCATCAAAGTATTT-ATTTATTATATACTC---------------------------------------------------------------------------------------------
droEle1 scf7180000485936:163-406 + GGATCCCAAACTATA------CATTTTTTTTGTTGACGGATGATTCTACGTCGGCGTGTTGAGGATTTTTAGATCCAAAAC---TATTTGA-------------TTT-TTTGTTTACGGATAATTCTACGTCGGCTTGCTCAGGATTT--------------------TGTGATTCAAAGCTAATTAAACTTTGTTCCACCATTTGTGATTCTGTTTTAA-----------------------------------TTCCACTTTGCTCTACAAGGTATTT-TTATAC----------------------------------------CCTTG------------------CAGAGCGTATTATAATTTCAGT--------CAGAAGTTT
droRho1 scf7180000774399:2971-3212 - ATTTCCCAAACT-------------TTTATTATTGTCGGATATTTCAACGACGGCGTGTTCAGGATTTGTAATTCCCAGAC---T-------------------TTT-ATTATTGTCGGATATTTCAACGACGGCGTGTTCAGGATTT--------------------TTATATCCCGAACTAAATTCACTTTTATTACCCATTTCAGATTCCGATCTGA-----------------------------------TTTGAGCCATTTCATCAAAGTATTT-TTATACCCGTTACTC--------GTAGA--------------------------------------G-TAAAAGGGTATATTGTATTCGTG--------CAAAAGTAT
droBia1 scf7180000301541:6490-6737 + AAGTCCCAAGATATG------TGT----ATTTTTGACGGATATTTCTACGTCGGCACTCTCTTCATTTTTAATTCCCAAGA---TATTTTT-------------ATT-TTTATTGACGGATATTTCTACGTCGGCGTTTTTAGGATTT--------------------TCGAATCCCAAATCTTTCTTACTATGTTCCACAAATAATGAATCTGTATCTT-----------------------------------TACTACTTTTATCTTCATATTTTTT--TATAATAAATTATT--------TTAAAGTTGGAATATTATTATACCCTTG------------------CAGAGGG-------------------------------T
droTak1 scf7180000413967:4296-4526 - AATTCCCACACT-------------TTTATTGTTGTCGGATAATTCAACGACGGCTTGTTCGGGATTTTTAGTTCCCAAAC---TT-------------------AT-ATTTTTGTCGGATAATTCAACGACGGCGTGTTCAGGATTT--------------------TTAATTCCCAAACTAAATTCGCTTTGATTTGCCATTTCAGATTCGGATCTGA-----------------------------------CTCGGGTCTTTTCATCAAAGTATTT-TTATAC----------------------------------------CCTTG------------------TAGAGGGTAGTATAATTTCAGT--------CAGATGTTT
droEug1 scf7180000408770:54496-54734 - AATTCCCCAAAT-------------TTTATTTTTGTCGGATATTTCAAGGACGTCGCGTTCGGAATTTTTGAATTCCAAAC---TT-------------------TT-ATTTTTGTCGGATTTTTCAACGACGGCGTGTTCAGGATTT--------------------TTATATTCCAAACTAGATTCGCTTTGATTACCCATTTCAGATTCGGATCTGA-----------------------------------AT----TTTTTTCATCAAAGTATTTTTTATACCCGTTACTC--------GTAGA--------------------------------------G-TAAAAGGGTATACTAGATTCGTT--------GAAAAGTAT
dm3 chr3RHet:1098207-1098412 + TATTATTAAATTATG------AAT-TTTTTCTTTGTCGGAAAATTCAACGACGGCGTGTTCAGGATTTGTGGATCTCAAAC---TAATAGT-------------CTT-TTTGTTAACGGATAGTTCAACGTCGGCGTGCTCAGGATTC--------------------TTTGATCTCAAGCTATATAAACTTCCTTCACTCATTACCGTTTAGGTTTTAA-----------------------------------ATACATTTTGTTCATCAAAGTATTA-TTTTA-------------------------------------------------------------------------------------------------------
droSim2 3l:23521878-23522085 - TATTTTTAGATTATG------AAT-TTTTTCTTTGTCGGAAAATTCAACGACGGCGTGTTCAGGA--------TCCAAAAC---TAATAGT-------------TTT-TTTGTTGACTGATAACTCAACGTCGACGTGCTCAGGATTC--------------------TTTGATCCCAAGCTATAAAAACTTCCTTCGCTCATTACCGTTTCGGTTTTAA-----------------------------------ATACTTTTTGTTCATCAAAGTATTT-TTTTATAATATATTC---------------------------------------------------------------------------------------------
droSec2 scaffold_48:71063-71289 + TATTTTCAGATTATG------CAT-TTTTTATTTGTCGGGAAATTCAACGACGGCGTGTTCAGGATTTGTGGATCCCAAAC---TATTCGTTT--------TTTTTT-TTTGTTAACGGATAATTCAACGTCGGCGTGCCCAAGATTC--------------------TTTGATCCCAAGCTATATCAACTTTCCTCTCTCATTACAGTTTCGATTCTAA-----------------------------------ATACTTTTTGTTCATCAAGGTTTTT-TTATAACAAATTCTT--------ATCAT-------------------------------------------------------------------------------G
droYak3 v2_chrUn_5595:6450-6684 + TATTATTAGATTATG------AAT-TTTTTCTTTGTCGGAAAATTCAACGACGGCGTGTTCAGGATTTGTGGATCCCAAAC---TATTAGT-------------TTT-ATTGTTGACGGATAATTCAACGTCGGAGTGATCAGGATTT--------------------TTTGATCCCAAGCTTTTTGATTGTAAT------TTGACGGAATTA------A-----------------------------------CATCGTCGGCTTGTTCAGGATTTTT-TGATCCCAAACTTTT--------CAATT------------------------------------------------------GTAATTTGACGGAATTACCATCGTCG
droEre2 scaffold_3332:2924-3132 - TAATCCGAAACTAGT------GTA-GTTTTGATTAGCGGAAGGAACATCGCTGGCGTTCTCGGGATTATTGAATCCCAAGT---TGGATAC----------ACTATT-ATCGGTGGCGGATATTTCTACACCAGTATGCTCAGGATAA--------------------CTCGATCCCGAGCTATCTATACTATCCTCTATAATAATTGATTCTGTTGTAA-----------------------------------GTGCTTCCTGTTTCTCGTAATATTT-TTTTA-------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
TAATCCCAAACTATT------AAA-ACTTTGGATGTCGGATAATTCAACGACGGCGGGTTCAGGATATTTGAATCCCAAAC---TA--------------------------TTGACGGATAATTCTTCGTCGGCGTGCTCAGGATTT--------------------TTTGATCCCAAGCTATATAAACTTCCTTCTACCTTTACTGAATCACTTTTCA-----------------------------------TTTCTTTTTCTTCTTCAAAATATTT-TTATACCCGATACTC--------AAAAT------------------------------------GAG-TATTGGGGTATATTAGATTTGTGGTAAA-AGTGGATGTGTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................................................................................................................TCTTCGTCGGCGTGCTCAGGATT..................................................................................................................................................................................................................................................23203.15634572000
............................................................................................................................TCTTCGTCGGCGTGCTCAGGATTT--------------------TT...........................................................................................................................................................................................................................26202.95590590000
...................................TCGGATAATTCAACGACGGCGGGT..........................................................................................................................................................................................................................................................................................................................................24201.25251240000
........................................TAATTCAACGACGGCGGGTTCAG......................................................................................................................................................................................................................................................................................................................................23201.00200200000
........................................TAATTCAACGACGGCGGGTTCA.......................................................................................................................................................................................................................................................................................................................................22200.95190190000
........................................TAATTCAACGACGGCGGGTTC........................................................................................................................................................................................................................................................................................................................................21200.50100100000
.........................................AATTCAACGACGGCGGGTTCAGGA....................................................................................................................................................................................................................................................................................................................................24200.357070000
........................................................................................................................TAATTCTTCGTCGGCGTGCTCAGGAT...................................................................................................................................................................................................................................................26200.357070000
........................................................................................................................TAATTCTTCGTCGGCGTGCTCAGG.....................................................................................................................................................................................................................................................24200.357070000
............................................................................................................................TCTTCGTCGGCGTGCTCAGGA....................................................................................................................................................................................................................................................21200.357430000
.....................................................................................................................................................................................................................................................................TTTCTTCTTCAAAATATTT-TTATACC.....................................................................................................2630.331010000
.................................TGTCGGATAATTCAACGACGGCGG............................................................................................................................................................................................................................................................................................................................................24200.306060000
..............................................................................................................................TTCGTCGGCGTGCTCAGGATTT--------------------TT...........................................................................................................................................................................................................................24200.306060000
........................................TAATTCAACGACGGCGGGTTCAA......................................................................................................................................................................................................................................................................................................................................23200.306060000
.............................................................................................................................CTTCGTCGGCGTGCTCAGGAT...................................................................................................................................................................................................................................................21200.255050000
.............................................................................................................................CTTCGTCGGCGTGCTCAGGATTT--------------------TT...........................................................................................................................................................................................................................25200.255050000
...................................TCGGATAATTCAACGACGGCGGG...........................................................................................................................................................................................................................................................................................................................................23200.255140000
.................................................................TATTTGAATCCCAAAC---TA--------------------------TTGACGGA.............................................................................................................................................................................................................................................................................26200.255050000
.........................................AATTCAACGACGGCGGGTTCAGG.....................................................................................................................................................................................................................................................................................................................................23200.255050000
..........................................................................................................................................................................................................................................................................................................................................................AG-TATTGGGGTATATTAGATT.....................21200.255000005
....................................CGGATAATTCAACGACGGCGGGT..........................................................................................................................................................................................................................................................................................................................................23200.204040000
...........................................................TCAGGATATTTGAATCCCAAAC---TA--------------------------T....................................................................................................................................................................................................................................................................................25200.204040000
............................................................................................................................TCTTCGTCGGCGTGCTCAGG.....................................................................................................................................................................................................................................................20200.204040000
.................................................................................................................TGACGGATAATTCTTCGTCGGC..............................................................................................................................................................................................................................................................22200.204040000
........................................TAATTCAACGACGGCGGGTTCAGGAT...................................................................................................................................................................................................................................................................................................................................26200.204040000
.....................................................................................A--------------------------TTGACGGATAATTCTTCGTCGGC..............................................................................................................................................................................................................................................................24200.153030000
............................................................................................................................TCTTCGTCGGCGTGCTCAGGATTT--------------------TAA..........................................................................................................................................................................................................................27200.153300000
.............................................................................................................................CTTCGTCGGCGTGCTCAGGATTT--------------------TAA..........................................................................................................................................................................................................................26200.153300000
.................................................................................................................TGACGGATAATTCTTCGTCGGCGT............................................................................................................................................................................................................................................................24200.153120000
............................................TCAACGACGGCGGGTTCAGGAT...................................................................................................................................................................................................................................................................................................................................22200.102020000
..............................................................................................................................TTCGTCGGCGTGCTCAGGATTT--------------------T............................................................................................................................................................................................................................23200.102020000
..............................................................................................................................TTCGTCGGCGTGCTCAGGATTT--------------------.............................................................................................................................................................................................................................22200.102020000
.....................................................................................................................................................................................TATATAAACTTCCTTCTACCTTTACT......................................................................................................................................................................................26200.102011000
...................................................................................................................................................T--------------------TTTGATCCCAAGCTATATAAACT......................................................................................................................................................................................................24200.102020000
............................................................................................................................TCTTCGTCGGCGTGCTCAGGATTT--------------------.............................................................................................................................................................................................................................24200.102200000
.....................................................................................A--------------------------TTGACGGATAATTCTTCGTCGG...............................................................................................................................................................................................................................................................23200.102020000
.................................................................................................................................................TTT--------------------TTTGATCCCAAGCTATATAAACT......................................................................................................................................................................................................26200.102200000
.........................................................................................................................................................................................TAAACTTCCTTCTACCTTTACTG.....................................................................................................................................................................................23200.102020000
........................................................................................................................TAATTCTTCGTCGGCGTGCTC........................................................................................................................................................................................................................................................21200.102200000
.......................................ATAATTCAACGACGGCGGGTTCAG......................................................................................................................................................................................................................................................................................................................................24200.102020000
.........................................................................TCCCAAAC---TA--------------------------TTGACGGATAATTC.......................................................................................................................................................................................................................................................................24200.102020000
........................................................................................................................................................................TTTGATCCCAAGCTATATAAACTTCCT..................................................................................................................................................................................................27200.102020000
.............................................................................................................................................................................TCCCAAGCTATATAAACTTCCTTC................................................................................................................................................................................................24200.102020000
........................................................................................................................TAATTCTTCGTCGGCGTGCTCAGGATTT--------------------.............................................................................................................................................................................................................................28200.102020000
........................................TAATTCAACGACGGCGGG...........................................................................................................................................................................................................................................................................................................................................18200.102200000
..................................................................................................................................................TT--------------------TTTGATCCCAAGCTATATAAACT......................................................................................................................................................................................................25200.102020000
.......................................................................................................................................................................................TATAAACTTCCTTCTACCTTTACTGAA...................................................................................................................................................................................27200.102020000
...................................TCGGATAATTCAACGACGGCGGGG..........................................................................................................................................................................................................................................................................................................................................24200.102020000
..................................................................................................................................TCGGCGTGCTCAGGATTT--------------------TTTG.........................................................................................................................................................................................................................22200.051010000
.....................................................................................................................................................................................TATATAAACTTCCTTCTACCTTTAC.......................................................................................................................................................................................25200.051010000
............................................................................................................................TCTTCGTCGGCGTGCTCA.......................................................................................................................................................................................................................................................18200.051010000
............................................................................................................................TCTTCGTCGGCGTGCTCAGGG....................................................................................................................................................................................................................................................21200.051100000
................................................................................................................TTGACGGATAATTCTTCGTCGGCGT............................................................................................................................................................................................................................................................25200.051010000
............................................................................................................................TCTTCGTCGGCGTGCTCAGGAA...................................................................................................................................................................................................................................................22200.051010000
............................................................................................................................................................................................................................................................................................TACCCGATACTC--------AAAAT------------------------------------GAG-TAT.....................................23200.051010000
..............................................................................................................................................................................................TTCCTTCTACCTTTACTGAATCACTT.............................................................................................................................................................................26200.051010000
..............................................................................................................................TTCGTCGGCGTGCTCAGGATTT--------------------TTT..........................................................................................................................................................................................................................25200.051001000
........................................................................................................................TAATTCTTCGTCGGCGTGCTCA.......................................................................................................................................................................................................................................................22200.051010000
.........................................................................TCCCAAAC---TA--------------------------TTGACGGATAATT........................................................................................................................................................................................................................................................................23200.051010000
.....................................GGATAATTCAACGACGGC..............................................................................................................................................................................................................................................................................................................................................18200.051010000
....................................CGGATAATTCAACGACGGCGG............................................................................................................................................................................................................................................................................................................................................21200.051010000
............................................TCAACGACGGCGGGTTCAGGATATT................................................................................................................................................................................................................................................................................................................................25200.051010000
............................................................................CAAAC---TA--------------------------TTGACGGATAATTCTTCGTC.................................................................................................................................................................................................................................................................27200.051010000
................................................................................C---TA--------------------------TTGACGGATAATTCTTCGT..................................................................................................................................................................................................................................................................22200.051000001
..........................................................................CCCAAAC---TA--------------------------TTGACGGATAATT........................................................................................................................................................................................................................................................................22200.051010000
.........................................................................................................................AATTCTTCGTCGGCGTGCTCAGGATT..................................................................................................................................................................................................................................................26200.051010000
..........................................................TTCAGGATATTTGAATCCCAAAC---TA--------------------------.....................................................................................................................................................................................................................................................................................25200.051010000
................................................................................C---TA--------------------------TTGACGGATAATTCTTCGTCGGC..............................................................................................................................................................................................................................................................26200.051010000
.................................TGTCGGATAATTCAACGACGGCGGGTG.........................................................................................................................................................................................................................................................................................................................................27200.051001000
..................................................................................................................................................TT--------------------TTTGATCCCAAGCTATATAAACAA.....................................................................................................................................................................................................26200.051010000
...................................................................................................................................................................................GCTATATAAACTTCCTTCTACCTTTAC.......................................................................................................................................................................................27200.051010000
........................................................................................................................TAATTCTTCGTCGGCGTGCTCAGGAA...................................................................................................................................................................................................................................................26200.051100000
.........................................................................TCCCAAAC---TA--------------------------TTGACGGATAA..........................................................................................................................................................................................................................................................................21200.051010000
.............................................CAACGACGGCGGGTTCAGG.....................................................................................................................................................................................................................................................................................................................................19200.051010000
...........................................................................................................................................TCAGGATTT--------------------TTTGATCCCAAGCTA..............................................................................................................................................................................................................24200.051010000
.....................................................................................................................................................................................................TACCTTTACTGAATCACTTTTCA-----------------------------------TTTC..................................................................................................................................27200.051010000
...........................................................................................................................TTCTTCGTCGGCGTGCTCAGGAT...................................................................................................................................................................................................................................................23200.051010000
............................................................................................................................TCTTCGTCGGCGTGCTCAGGAAA..................................................................................................................................................................................................................................................23200.051010000
.....................................GGATAATTCAACGACGGCGGGT..........................................................................................................................................................................................................................................................................................................................................22200.051010000
.............................................................................................................................................................................TCCCAAGCTATATAAACTTCCTTCTA..............................................................................................................................................................................................26200.051010000
.............................................................................................................................................................................TCCCAAGCTATATAAACTTCCTTCTAC.............................................................................................................................................................................................27200.051010000
........................................TAATTCAACGACGGCGGGTTCT.......................................................................................................................................................................................................................................................................................................................................22200.051100000
.....................................................................................................................GGATAATTCTTCGTCGGCGTGCTCA.......................................................................................................................................................................................................................................................25200.051010000
.........................................................................................................................................................................................TAAACTTCCTTCTACCTTTACTT.....................................................................................................................................................................................23200.051100000
.........................................................................................................................................................................................TAAACTTCCTTCTACCTTTACTGA....................................................................................................................................................................................24200.051010000
.................................................................................................................TGACGGATAATTCTTCGTCGGCGTGC..........................................................................................................................................................................................................................................................26200.051001000
...........................................................................................................................TTCTTCGTCGGCGTGCTCAG......................................................................................................................................................................................................................................................20200.051010000
...............................................................................................................................TCGTCGGCGTGCTCAGGATTT--------------------TTTGATC......................................................................................................................................................................................................................28200.051010000
..........................................................................................................................................................................TGATCCCAAGCTATATAAACTTCC...................................................................................................................................................................................................24200.051010000
................................ATGTCGGATAATTCAACGACGGC..............................................................................................................................................................................................................................................................................................................................................23200.051010000
.................................................................TATTTGAATCCCAAAC---TA--------------------------TTGAC................................................................................................................................................................................................................................................................................23200.051010000
...............................................................................................................................TCGTCGGCGTGCTCAGGATTT--------------------.............................................................................................................................................................................................................................21200.051010000
.....................................GGATAATTCAACGACGGCGGG...........................................................................................................................................................................................................................................................................................................................................21200.051010000
...........................................TTCAACGACGGCGGGTTCAGGAT...................................................................................................................................................................................................................................................................................................................................23200.051010000
.............................................................................................................................................................................TCCCAAGCTATATAAACTTCCTTCTACCT...........................................................................................................................................................................................29200.051010000
............................................................................................................................TCTTCGTCGGCGTGCTCAGGATTT--------------------T............................................................................................................................................................................................................................25200.051001000
..................................GTCGGATAATTCAACGACGGC..............................................................................................................................................................................................................................................................................................................................................21200.051010000
...................................................................................................................ACGGATAATTCTTCGTCGGCGTGC..........................................................................................................................................................................................................................................................24200.051010000
...............................................................................................................................TCGTCGGCGTGCTCAGGATTT--------------------TTTGA........................................................................................................................................................................................................................26200.051010000
...................................................................................................................................................................................................TCTACCTTTACTGAATCACTTTTCA-----------------------------------TT....................................................................................................................................27200.051010000
..............................................................................................................................TTCGTCGGCGTGCTCAGGATTT--------------------TTTG.........................................................................................................................................................................................................................26200.051010000
.......................................................................................................................................................................................TATAAACTTCCTTCTACCTTTACTTT....................................................................................................................................................................................26200.051010000
.......................................................................................................................................................................................TATAAACTTCCTTCTACCTTTACTGA....................................................................................................................................................................................26200.051010000
..........................................................................CCCAAAC---TA--------------------------TTGACGGATAATTCTTCGT..................................................................................................................................................................................................................................................................28200.051010000
.............................................CAACGACGGCGGGTTCAGGA....................................................................................................................................................................................................................................................................................................................................20200.051010000
.............................................................................................................................CTTCGTCGGCGTGCTCAGGATT..................................................................................................................................................................................................................................................22200.051010000
...........................................TTCAACGACGGCGGGTTCAGGA....................................................................................................................................................................................................................................................................................................................................22200.051010000
............................................TCAACGACGGCGGGTTCAGGATA..................................................................................................................................................................................................................................................................................................................................23200.051010000
dp5
TAATCCCAAACTATT------AAA-ACTTTGAATGTCGGATAATTCAACGACGGCAGGTTCAGGATATTTGAATCCCAAAC---TA--------------------------TTGACGGATAATTCTTCGTCGGCGTGCTCAGGATTT--------------------TTTGATCCCAAGCTATATAAACTTCCTTCTACCTTTACTGAATCACTTTTCA-----------------------------------TTTCTTTTTCTTCTTCAAAATATTT-TTTTATTATATATTC---------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................TGAATGTCGGATAATTCAACGACGGC..............................................................................................................................................................................................................................................................................................................................................261141.00141031000013700
.............................TGAATGTCGGATAATTCAACGACGG...............................................................................................................................................................................................................................................................................................................................................251104.00104018000008600
.........................................................................................................................................................................................TAAACTTCCTTCTACCTTTACTGAAT..................................................................................................................................................................................26378.002340167650100100
...........................TTTGAATGTCGGATAATTCAACGACGG...............................................................................................................................................................................................................................................................................................................................................27163.006305000005800
..............................GAATGTCGGATAATTCAACGACGGC..............................................................................................................................................................................................................................................................................................................................................25145.004507001003700
........................................................................................................................TAATTCTTCGTCGGCGTGCTCAGG.....................................................................................................................................................................................................................................................24644.672680651000019660
.................................................................................................................TGACGGATAATTCTTCGTCGGC..............................................................................................................................................................................................................................................................22641.67250023860401100
........................................................................................................................TAATTCTTCGTCGGCGTGCTCAGGA....................................................................................................................................................................................................................................................25641.672500672020017360
............................TTGAATGTCGGATAATTCAACGACGGC..............................................................................................................................................................................................................................................................................................................................................27132.003203000002900
.................................................................................................................TGACGGATAATTCTTCGTCGGCGTG...........................................................................................................................................................................................................................................................25627.67166016500000100
............................TTGAATGTCGGATAATTCAACGACGG...............................................................................................................................................................................................................................................................................................................................................26124.002406000001800
........................................................................................................................TAATTCTTCGTCGGCGTGCTCAG......................................................................................................................................................................................................................................................23623.671420210000011650
...........................TTTGAATGTCGGATAATTCAACGAC.................................................................................................................................................................................................................................................................................................................................................25123.002303000002000
.................................................................................................................TGACGGATAATTCTTCGTCGGCGTGC..........................................................................................................................................................................................................................................................26620.33122010270601420
.................................................................TATTTGAATCCCAAAC---TA--------------------------TTGACGGA.............................................................................................................................................................................................................................................................................26320.0060035400001920
.........................................................................................................................................................................................TAAACTTCCTTCTACCTTTACTGAA...................................................................................................................................................................................25318.675604970000000
.............................TGAATGTCGGATAATTCAACGAC.................................................................................................................................................................................................................................................................................................................................................23118.001803000001500
.........................................................................................................................................................................................TAAACTTCCTTCTACCTTTACTGAATCAC...............................................................................................................................................................................29217.503502870000000
..................................................................................................................................TCGGCGTGCTCAGGATTT--------------------TTTGATCC.....................................................................................................................................................................................................................26515.6078041370000000
........................................................................................................................TAATTCTTCGTCGGCGTGCTCAGGAT...................................................................................................................................................................................................................................................26615.3392029301005720
.................................................................................................................TGACGGATAATTCTTCGTCGGCG.............................................................................................................................................................................................................................................................23614.678807900100800
.................................................................TATTTGAATCCCAAAC---TA--------------------------TTGACGGAT............................................................................................................................................................................................................................................................................27314.6744024301001600
.................................................................................................................TGACGGATAATTCTTCGTCGGCGT............................................................................................................................................................................................................................................................24612.507506190000410
.............................TGAATGTCGGATAATTCAACGACGGCG.............................................................................................................................................................................................................................................................................................................................................27512.406202000006000
....................................................................................TA--------------------------TTGACGGATAATTCTTCGTCGGC..............................................................................................................................................................................................................................................................25612.177306710000500
.................................................................................................................TGACGGATAATTCTTCGTCGG...............................................................................................................................................................................................................................................................21611.677007000000000
.........................................................................................................................................................................................TAAACTTCCTTCTACCTTTACTGAAA..................................................................................................................................................................................26311.003302670000000
..................................................................................................................................TCGGCGTGCTCAGGATTT--------------------TTTGATC......................................................................................................................................................................................................................25510.805404530100500
.................................................................................................................TGACGGATAATTCTTCGTCGGCGA............................................................................................................................................................................................................................................................24610.676406310000000
............................................................................................................................TCTTCGTCGGCGTGCTCAGGATTT--------------------TT...........................................................................................................................................................................................................................2659.6048027100002000
.....................................................................................................................................................................................TATATAAACTTCCTTCTACCTTTAC.......................................................................................................................................................................................2539.3328012100000600
.................................................................TATTTGAATCCCAAAC---TA--------------------------TTGACGG..............................................................................................................................................................................................................................................................................2539.332802220000400
.........................................................................TCCCAAAC---TA--------------------------TTGACGGATAATTC.......................................................................................................................................................................................................................................................................2449.003603200000400
....................................................................................TA--------------------------TTGACGGATAATTCTTCGTCGG...............................................................................................................................................................................................................................................................2468.835304800100310
...................................TCGGATAATTCAACGACGGC..............................................................................................................................................................................................................................................................................................................................................20128.50102050000073240
...........................TTTGAATGTCGGATAATTCAACGACG................................................................................................................................................................................................................................................................................................................................................2618.0080000000800
.........................................................................................................................................................................................TAAACTTCCTTCTACCTTTACTG.....................................................................................................................................................................................2336.672001800000200
..........................................................................................................................................................................................AAACTTCCTTCTACCTTTACTGAAT..................................................................................................................................................................................2536.672001910000000
.........................................................................................................................................................................................TAAACTTCCTTCTACCTTTACTGAATC.................................................................................................................................................................................2736.331901620100000
.........................................................................TCCCAAAC---TA--------------------------TTGACGGATAATTCT......................................................................................................................................................................................................................................................................2546.252502210000200
..........................................................................................................................................................................TGATCCCAAGCTATATAAACTTCCT..................................................................................................................................................................................................2546.252502320000000
..................................................................................................................................................TT--------------------TTTGATCCCAAGCTATATAAACT......................................................................................................................................................................................................2556.003001950000600
TAATCCCAAACTATT------AAA-ACTTTGAA....................................................................................................................................................................................................................................................................................................................................................................2616.0060000000060
..............................GAATGTCGGATAATTCAACGACGG...............................................................................................................................................................................................................................................................................................................................................2416.0060300000300
..................................................................................................................GACGGATAATTCTTCGTCGGC..............................................................................................................................................................................................................................................................2165.333203200000000
..........................................................................................................................................................................TGATCCCAAGCTATATAAACTTCCTTC................................................................................................................................................................................................2745.002001810000100
.........................................................................................................................................................................................TAAACTTCCTTCTACCTTTACTGA....................................................................................................................................................................................2435.001501500000000
.........................................................................TCCCAAAC---TA--------------------------TTGACGGATAATT........................................................................................................................................................................................................................................................................2345.002001910000000
.................................................................................................................................................TTT--------------------TTTGATCCCAAGCTATATAAACT......................................................................................................................................................................................................2655.002501350000610
............................................................................................................................TCTTCGTCGGCGTGCTCAGGATT..................................................................................................................................................................................................................................................2364.832902900000000
....................................................................................TA--------------------------TTGACGGATAATTCTTCGTCGGCG.............................................................................................................................................................................................................................................................2664.502702300000400
..............................GAATGTCGGATAATTCAACGACGGCG.............................................................................................................................................................................................................................................................................................................................................2654.402203000001900
............................................................................................................................TCTTCGTCGGCGTGCTCAGGATTT--------------------.............................................................................................................................................................................................................................2464.172502300000200
............................................................................................................................TCTTCGTCGGCGTGCTCAGGATTT--------------------T............................................................................................................................................................................................................................2564.172501900001410
.....................................................................TGAATCCCAAAC---TA--------------------------TTGACGGATAAT.........................................................................................................................................................................................................................................................................2634.00120700100310
.........................................................................................................................................................................................TAAACTTCCTTCTACCTTTACTGAATCA................................................................................................................................................................................2824.0080800000000
...........TATT------AAA-ACTTTGAATGTCGGATAAT.........................................................................................................................................................................................................................................................................................................................................................2614.0040000000040
.............................TGAATGTCGGATAATTCAACGACG................................................................................................................................................................................................................................................................................................................................................2414.0040200000200
..............................................................................................................................TTCGTCGGCGTGCTCAGGATTT--------------------TT...........................................................................................................................................................................................................................2454.002001210302200
............................TTGAATGTCGGATAATTCAACGACGGCG.............................................................................................................................................................................................................................................................................................................................................2854.002002000001800
.....................................................................................................................................................................................................TACCTTTACTGAATCACTTTTCA-----------------------------------TTT...................................................................................................................................2624.0080500000300
........................................................................................................................TAATTCTTCGTCGGCGTGCT.........................................................................................................................................................................................................................................................2063.672207000001320
................................................................................................................TTGACGGATAATTCTTCGTCGGC..............................................................................................................................................................................................................................................................2363.502102100000000
...................................................................................................................................................T--------------------TTTGATCCCAAGCTATATAAACT......................................................................................................................................................................................................2453.201601420000000
........................................................................................................................................TGCTCAGGATTT--------------------TTTGATCCCAAG.................................................................................................................................................................................................................2453.001501500000000
........................................................................................................................TAATTCTTCGTCGGCGTGCTCA.......................................................................................................................................................................................................................................................2263.001801000000701
...........................TTTGAATGTCGGATAATTCAACGA..................................................................................................................................................................................................................................................................................................................................................2413.0030200000100
................................................................................................................TTGACGGATAATTCTTCGTCGGCGT............................................................................................................................................................................................................................................................2563.001801800000000
.................................................................TATTTGAATCCCAAAC---TA--------------------------TTGACG...............................................................................................................................................................................................................................................................................2433.0090800000100
............................TTGAATGTCGGATAATTCAACGA..................................................................................................................................................................................................................................................................................................................................................2313.0030300000000
.........................................................................................................................AATTCTTCGTCGGCGTGCTCAGGA....................................................................................................................................................................................................................................................2463.00180900000900
...........................................................................................................................................................................................................TACTGAATCACTTTTCA-----------------------------------TTTCTTT...............................................................................................................................2413.0030000000030
..................................................................................................................................TCGGCGTGCTCAGGATTT--------------------TTTGAT.......................................................................................................................................................................................................................2453.001501410000000
...............................................................................................................................................................................................TCCTTCTACCTTTACTGAATCACTTT............................................................................................................................................................................2613.0030300000000
...................................TCGGATAATTCAACGACGGCAG............................................................................................................................................................................................................................................................................................................................................2213.0030000000030
.............................TGAATGTCGGATAATTCAACGA..................................................................................................................................................................................................................................................................................................................................................2213.0030300000000
...........................TTTGAATGTCGGATAATTCAACGACGGC..............................................................................................................................................................................................................................................................................................................................................2813.0030000000120
............................TTGAATGTCGGATAATTCAACGAC.................................................................................................................................................................................................................................................................................................................................................2413.0030100000200
.................................................................TATTTGAATCCCAAAC---TA--------------------------TTGACGGAA............................................................................................................................................................................................................................................................................2733.0090810000000
.................................................................................................................TGACGGATAATTCTTCGTCGGCGTGCA.........................................................................................................................................................................................................................................................2762.831701300100210
............................................................................................................................TCTTCGTCGGCGTGCTCAGGAT...................................................................................................................................................................................................................................................2262.831701200000410
........................................................................................................................................TGCTCAGGATTT--------------------TTTGATCCCAAGC................................................................................................................................................................................................................2552.801401210000100
.........................................................................................................................................................................................TAAACTTCCTTCTACCTTTACT......................................................................................................................................................................................2232.6780620000000
.........................................................................................................................................................................................TAAACTTCCTTCTACCTTTAC.......................................................................................................................................................................................2132.6780350000000
.................................................................................................................TGACGGATAATTCTTCGTCGGCGTGA..........................................................................................................................................................................................................................................................2662.671601600000000
........................................................................................................................TAATTCTTCGTCGGCGTGCTC........................................................................................................................................................................................................................................................2162.67160400000750
.................................................................................................................TGACGGATAATTCTTCGTCGGCGC............................................................................................................................................................................................................................................................2462.671601420000000
.................................................................TATTTGAATCCCAAAC---TA--------------------------TTGACGGATA...........................................................................................................................................................................................................................................................................2832.6780800000000
.................................TGTCGGATAATTCAACGACGGC..............................................................................................................................................................................................................................................................................................................................................22122.503002310000600
..................................................................................................................GACGGATAATTCTTCGTCGGCGTG...........................................................................................................................................................................................................................................................2462.501501500000000
....................................................................................TA--------------------------TTGACGGATAATTCTTCGTCG................................................................................................................................................................................................................................................................2362.331401300100000
.......................................................................................................................ATAATTCTTCGTCGGCGTGCTCAGG.....................................................................................................................................................................................................................................................2562.33140500000900
................................................................................................................TTGACGGATAATTCTTCGTCGGCGTGC..........................................................................................................................................................................................................................................................2762.331401200200000
........................................................................................................................TAATTCTTCGTCGGCGTGCTCAGGATT..................................................................................................................................................................................................................................................2762.17130600000700
.......................................................................................................................ATAATTCTTCGTCGGCGTGCTCAGGA....................................................................................................................................................................................................................................................2662.17130100000930
..........................................................................................................................................................................................AAACTTCCTTCTACCTTTACTGAATCAC...............................................................................................................................................................................2822.0040400000000
...............................................................................................................................................................................................TCCTTCTACCTTTACTGAATCACTTTTC..........................................................................................................................................................................2812.0020200000000
.......................................................................................................................................................................................TATAAACTTCCTTCTACCTTTAC.......................................................................................................................................................................................2332.0060320000100
...........................TTTGAATGTCGGATAATTCAACGACGGA..............................................................................................................................................................................................................................................................................................................................................2812.0020000000200
..............................GAATGTCGGATAATTCAACGAC.................................................................................................................................................................................................................................................................................................................................................2212.0020100000100
...................................................................................................................................................................................................TCTACCTTTACTGAATCACTTTTCA-----------------------------------TT....................................................................................................................................2722.0040400000000
.....................................................................................A--------------------------TTGACGGATAATTCTTCGTCGGC..............................................................................................................................................................................................................................................................2462.001201200000000
..................................................................ATTTGAATCCCAAAC---TA--------------------------TTGACGGAT............................................................................................................................................................................................................................................................................2632.0060300000300
...................................TCGGATAATTCAACGACGGCAGGG..........................................................................................................................................................................................................................................................................................................................................2412.0020000000200
...........................................................TCAGGATATTTGAATCCCAAAC---TA--------------------------.....................................................................................................................................................................................................................................................................................2442.0080610000100
........................................................................................................................TAATTCTTCGTCGGCGTGC..........................................................................................................................................................................................................................................................1962.00120300000720
............................................TCAACGACGGCAGGTTCAGGATA..................................................................................................................................................................................................................................................................................................................................2312.0020200000000
...................................TCGGATAATTCAACGACGGCAGG...........................................................................................................................................................................................................................................................................................................................................2312.0020000000020
..............................GAATGTCGGATAATTCAACGACG................................................................................................................................................................................................................................................................................................................................................2312.0020200000000
..................................................................................................................GACGGATAATTCTTCGTCGGCGT............................................................................................................................................................................................................................................................2362.001201200000000
...........................................................................................................................TTCTTCGTCGGCGTGCTCAGG.....................................................................................................................................................................................................................................................2161.83110600100400
........................................................................................................................TAATTCTTCGTCGGCGTGCTCAGGAA...................................................................................................................................................................................................................................................2661.83110600000500
.......................................................................................................................ATAATTCTTCGTCGGCGTGCTCAG......................................................................................................................................................................................................................................................2461.831101000001000
....................................................................................TA--------------------------TTGACGGATAATTCTTCGT..................................................................................................................................................................................................................................................................2161.831101100000000
................................................................................................................TTGACGGATAATTCTTCGTCGGCGTG...........................................................................................................................................................................................................................................................2661.831101000000100
..................................................................................................................GACGGATAATTCTTCGTCGGCGTGC..........................................................................................................................................................................................................................................................2561.831101010000000
.............................................................................................................................................................................TCCCAAGCTATATAAACTTCCTTC................................................................................................................................................................................................2451.8090900000000
..............................................................................................................................TTCGTCGGCGTGCTCAGGATTT--------------------TTTGA........................................................................................................................................................................................................................2751.8090700000200
...........................................................TCAGGATATTTGAATCCCAAAC---TA--------------------------T....................................................................................................................................................................................................................................................................................2541.7570410000110
.....................................................................................................................................................................................................................................................................TTTCTTCTTCAAAATATTT-TTTTAT......................................................................................................2541.7570610000000
.......................................................................................................................................................................................TATAAACTTCCTTCTACCTTTACTGAA...................................................................................................................................................................................2731.6750310000100
............................................................................................................................TCTTCGTCGGCGTGCTCAGGA....................................................................................................................................................................................................................................................2161.67100510000400
.....................................................................TGAATCCCAAAC---TA--------------------------TTGACGGATAATTC.......................................................................................................................................................................................................................................................................2831.6750100100300
..................................................................................................................GACGGATAATTCTTCGTCGG...............................................................................................................................................................................................................................................................2061.671001000000000
.........................................................................................................................................................................................TAAACTTCCTTCTACCTTTACTGAAC..................................................................................................................................................................................2631.6750050000000
...........................................................................................................................TTCTTCGTCGGCGTGCTCAGGATT..................................................................................................................................................................................................................................................2461.67100600000310
..........................................................................................................................................................................................AAACTTCCTTCTACCTTTACTGAA...................................................................................................................................................................................2431.6750500000000
..................................................................................................................................TCGGCGTGCTCAGGATTT--------------------TTTGATCCC....................................................................................................................................................................................................................2751.6080620000000
...........................................................................................................................................TCAGGATTT--------------------TTTGATCCCAAGCTA..............................................................................................................................................................................................................2451.6080500000300
..........................................................................................................................................................................TGATCCCAAGCTATATAAACTTCCTT.................................................................................................................................................................................................2641.5060600000000
................................................................................................................TTGACGGATAATTCTTCGTCGGCG.............................................................................................................................................................................................................................................................2461.5090900000000
.........................................................................TCCCAAAC---TA--------------------------TTGACGGATAATTCA......................................................................................................................................................................................................................................................................2541.5060400000200
.........................................................................TCCCAAAC---TA--------------------------TTGACGGATA...........................................................................................................................................................................................................................................................................2041.5060300000300
........................................................................................................................................................................TTTGATCCCAAGCTATATAAACTTCCT..................................................................................................................................................................................................2741.5060240000000
...........................................................TCAGGATATTTGAATCCCAAAC---T................................................................................................................................................................................................................................................................................................................2341.5060510000000
.........................................................................................................................AATTCTTCGTCGGCGTGCTCAGGAT...................................................................................................................................................................................................................................................2561.5090500001300
...................................................................................................................................CGGCGTGCTCAGGATTT--------------------TTTGATC......................................................................................................................................................................................................................2451.4070700000000
..................................................................................................................................TCGGCGTGCTCAGGATTT--------------------TTTGATCCCA...................................................................................................................................................................................................................2851.4070700000000
.....................................................................TGAATCCCAAAC---TA--------------------------TTGACGGATAA..........................................................................................................................................................................................................................................................................2531.3340200000200
..................................................................ATTTGAATCCCAAAC---TA--------------------------TTGACGG..............................................................................................................................................................................................................................................................................2431.3340400000000
.....................................................................TGAATCCCAAAC---TA--------------------------TTGACGG..............................................................................................................................................................................................................................................................................2131.3340400000000
......................................................................................................................................................................................ATATAAACTTCCTTCTACCTTTAC.......................................................................................................................................................................................2431.3340310000000
.......................................................................................................................................................................................TATAAACTTCCTTCTACCTTTACTGAAT..................................................................................................................................................................................2831.3340120000100
................................................................................................................TTGACGGATAATTCTTCGTCGGCGA............................................................................................................................................................................................................................................................2561.3380800000000
....................................................................................................................CGGATAATTCTTCGTCGGCGTGC..........................................................................................................................................................................................................................................................2361.3380100000610
..........................................................................................................................................................................................AAACTTCCTTCTACCTTTACTGAAA..................................................................................................................................................................................2531.3340400000000
.........................................................................................................................................................................TTGATCCCAAGCTATATAAACTTCCTTC................................................................................................................................................................................................2841.2550500000000
..........................................................................CCCAAAC---TA--------------------------TTGACGGATAATTCTTCG...................................................................................................................................................................................................................................................................2741.2550500000000
..........................................................................CCCAAAC---TA--------------------------TTGACGGATAATTC.......................................................................................................................................................................................................................................................................2341.2550500000000
...........................................................TCAGGATATTTGAATCCCAAAC---.................................................................................................................................................................................................................................................................................................................2241.2550200000300
...................................TCGGATAATTCAACGACGGCAT............................................................................................................................................................................................................................................................................................................................................2281.25100000000190
..................................................................................................................................TCGGCGTGCTCAGGATTT--------------------TTTGATA......................................................................................................................................................................................................................2551.2060600000000
.........................................................................................................................AATTCTTCGTCGGCGTGCTCAGG.....................................................................................................................................................................................................................................................2361.1770500000200
....................................................................................TA--------------------------TTGACGGATAATTCTTCGTCGGCGC............................................................................................................................................................................................................................................................2761.1770610000000
.....................................................................TGAATCCCAAAC---TA--------------------------TTGACGGAT............................................................................................................................................................................................................................................................................2331.0030300000000
...........................TTTGAATGTCGGATAATTCAACGAA.................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
...................................TCGGATAATTCAACGACGGCA.............................................................................................................................................................................................................................................................................................................................................2111.0010000000100
..................................................................................................................................TCGGCGTGCTCAGGATTT--------------------TTTG.........................................................................................................................................................................................................................2251.0050500000000
.....................................................................TGAATCCCAAAC---TA--------------------------TTGACG...............................................................................................................................................................................................................................................................................2031.0030300000000
.............................TGAATGTCGGATAATTCAACG...................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.............................TGAATGTCGGATAATTCAACGACGGCA.............................................................................................................................................................................................................................................................................................................................................2711.0010000000100
.............................TGAATGTCGGATAATTCAACGACGGA..............................................................................................................................................................................................................................................................................................................................................2611.0010000000100
..................................................................................................................GACGGATAATTCTTCGTCGGCG.............................................................................................................................................................................................................................................................2261.0060600000000
.........................................................................TCCCAAAC---TA--------------------------TTGACGGATAATTCTTC....................................................................................................................................................................................................................................................................2741.0040310000000
.....................................................................................................................................................................................................TACCTTTACTGAATCACTTTTCA-----------------------------------TT....................................................................................................................................2521.0020100000100
..............................................................................................................................................................................................TTCCTTCTACCTTTACTGAAT..................................................................................................................................................................................2131.0030300000000
...........................TTTGAATGTCGGATAATT........................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
.........................................................................TCCCAAAC---TA--------------------------TTGACGGATAATTCTTCG...................................................................................................................................................................................................................................................................2841.0040100000300
.............................................CAACGACGGCAGGTTCAGGATATT................................................................................................................................................................................................................................................................................................................................2411.0010100000000
........................................TAATTCAACGACGGCAGGTTCAGG.....................................................................................................................................................................................................................................................................................................................................2411.0010100000000
..............................GAATGTCGGATAATTCAACGACGGG..............................................................................................................................................................................................................................................................................................................................................2511.0010000000100
..............T------AAA-ACTTTGAATGTCGGATAATTCA......................................................................................................................................................................................................................................................................................................................................................2611.0010000001000
........................................................................................................................TAATTCTTCGTCGGCGTGCTCAGGATA..................................................................................................................................................................................................................................................2761.0060210000300
............................................................................................................................TCTTCGTCGGCGTGCTCAGG.....................................................................................................................................................................................................................................................2061.0060500000100
.............................................................................AAAC---TA--------------------------TTGACGGATAATTCTTCGT..................................................................................................................................................................................................................................................................2551.0050500000000
..................................................................................................................................................................................................TTCTACCTTTACTGAATCACTTTTC..........................................................................................................................................................................2511.0010100000000
...................................................................................................................................................................................................TCTACCTTTACTGAATCACTTTTCA-----------------------------------TTT...................................................................................................................................2821.0020200000000
..........................................................TTCAGGATATTTGAATCCCAAAC---T................................................................................................................................................................................................................................................................................................................2431.0030100000200
...........TATT------AAA-ACTTTGAATGTCGGA.............................................................................................................................................................................................................................................................................................................................................................2211.0010000000010
............................TTGAATGTCGGATAATTCAAC....................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
TAATCCCAAACTATT------AAA-ACTTTGAATG..................................................................................................................................................................................................................................................................................................................................................................2811.0010000000010
............................TTGAATGTCGGATAATTCAACGACG................................................................................................................................................................................................................................................................................................................................................2511.0010000000100
.................................................................................................................TGACGGATAATTCTTCGTCGGCGTGAA.........................................................................................................................................................................................................................................................2761.0060600000000
...........................TTTGAATGTCGGATAATTCAAA....................................................................................................................................................................................................................................................................................................................................................2211.0010000000100
..................................................................................................................................................................................................TTCTACCTTTACTGAATCAC...............................................................................................................................................................................2021.0020200000000
........................................................................................................................................................................TTTGATCCCAAGCTATATAAACTTCC...................................................................................................................................................................................................2651.0050300000200
..................................................................................................................GACGGATAATTCTTCGTCGGCGA............................................................................................................................................................................................................................................................2361.0060600000000
..................................................................................................................................................TT--------------------TTTGATCCCAAGCTATATAAAC.......................................................................................................................................................................................................2451.0050410000000
.....................................................................................A--------------------------TTGACGGATAATTCTTCGTCGG...............................................................................................................................................................................................................................................................2361.0060600000000
...........................................................................CCAAAC---TA--------------------------TTGACGGATAATTCTTC....................................................................................................................................................................................................................................................................2551.0050410000000
........................................TAATTCAACGACGGCAGGTTCAG......................................................................................................................................................................................................................................................................................................................................2311.0010000000010
........................................TAATTCAACGACGGCAGGTTCAGGA....................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.....................................................................TGAATCCCAAAC---TA--------------------------TTGACGGATAATT........................................................................................................................................................................................................................................................................2731.0030210000000
.........................................................................................................................................................................................TAAACTTCCTTCTACCTTTACTGAATCAA...............................................................................................................................................................................2921.0020200000000
................................................................................................................TTGACGGATAATTCTTCGTCGG...............................................................................................................................................................................................................................................................2261.0060600000000
...................................TCGGATAATTCAACGACGGCAA............................................................................................................................................................................................................................................................................................................................................2211.0010000000100
............................TTGAATGTCGGATAATTCAACGACGGCA.............................................................................................................................................................................................................................................................................................................................................2811.0010100000000
.............................................................................................................................................................................TCCCAAGCTATATAAACTTCCTTCTACC............................................................................................................................................................................................2831.0030210000000
.............................TGAATGTCGGATAATTCAACGACGGCAA............................................................................................................................................................................................................................................................................................................................................2811.0010000000100
............................................TCAACGACGGCAGGTTCAGGATATT................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.................................TGTCGGATAATTCAACGACGGCAG............................................................................................................................................................................................................................................................................................................................................2411.0010000000010
............................................TCAACGACGGCAGGTTCAGG.....................................................................................................................................................................................................................................................................................................................................2011.0010100000000
TAATCCCAAACTATT------AAA-ACTTTGAAT...................................................................................................................................................................................................................................................................................................................................................................2711.0010000000010
TAATCCCAAACTATT------AAA-ACTTTG......................................................................................................................................................................................................................................................................................................................................................................2421.0020100000010
..................................................................................................................................................................................................TTCTACCTTTACTGAATCACTTTTCA-----------------------------------T.....................................................................................................................................2711.0010010000000
.............................................CAACGACGGCAGGTTCAGGAT...................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.............................TGAATGTCGGATAATTCAACGACGGT..............................................................................................................................................................................................................................................................................................................................................2611.0010000000010
...............................AATGTCGGATAATTCAACGACGGC..............................................................................................................................................................................................................................................................................................................................................2441.0040300000100
...............................................................................................................................................................................................TCCTTCTACCTTTACTGAATCACTT.............................................................................................................................................................................2521.0020200000000
...............................................................................................................................................................................................TCCTTCTACCTTTACTGAATCACTTTT...........................................................................................................................................................................2711.0010000000100
..................................................................ATTTGAATCCCAAAC---TA--------------------------TTGACGGA.............................................................................................................................................................................................................................................................................2531.0030300000000
.......................................................................................................................ATAATTCTTCGTCGGCGTGCTCA.......................................................................................................................................................................................................................................................2360.8350000000500
.........................................................................................................................AATTCTTCGTCGGCGTGCTCAG......................................................................................................................................................................................................................................................2260.8350300000200
.................................................................................................................TGACGGATAATTCTTCGTCGGCGTGT..........................................................................................................................................................................................................................................................2660.8350110000300
.............................................................................................................................................................................TCCCAAGCTATATAAACTTCCTTCTA..............................................................................................................................................................................................2650.8040300000100
...............................................................................................................................TCGTCGGCGTGCTCAGGATTT--------------------TT...........................................................................................................................................................................................................................2350.8040300100000
.................................................................................................................................................TTT--------------------TTTGATCCCAAGCTATATAAAC.......................................................................................................................................................................................................2550.8040200000200
..........................................................................................................................................................................TGATCCCAAGCTATATAAACTTCC...................................................................................................................................................................................................2450.8040400000000
..........................................................................................................................................................................TGATCCCAAGCTATATAAACTTC....................................................................................................................................................................................................2350.8040310000000
...................................................................................................................................................T--------------------TTTGATCCCAAGCTATATAAACTTCCT..................................................................................................................................................................................................2840.7530120000000
.........................................................................TCCCAAAC---TA--------------------------TTGACGGATAATTCTT.....................................................................................................................................................................................................................................................................2640.7530300000000
..........................................................................CCCAAAC---TA--------------------------TTGACGGATAATTCT......................................................................................................................................................................................................................................................................2440.7530300000000
.........................................................................................................................................................................TTGATCCCAAGCTATATAAACTTCCT..................................................................................................................................................................................................2640.7530300000000
...........................................................................................................................TTCTTCGTCGGCGTGCTCAGGA....................................................................................................................................................................................................................................................2260.6740000000400
..............................................................................................................................TTCGTCGGCGTGCTCAGGATT..................................................................................................................................................................................................................................................2160.6740400000000
...........................................................................................................................TTCTTCGTCGGCGTGCTCAG......................................................................................................................................................................................................................................................2060.6740300000100
..............................................................................................................................TTCGTCGGCGTGCTCAGGATTT--------------------.............................................................................................................................................................................................................................2260.6740300100000
..................................................................................................................................TCGGCGTGCTCAGGATTT--------------------TTTGG........................................................................................................................................................................................................................2360.6740400000000
........................................................................................................................TAATTCTTCGTCGGCGTGCTCAA......................................................................................................................................................................................................................................................2360.6740400000000
.................................................................................................................TGACGGATAATTCTTCGTCGGCGAAA..........................................................................................................................................................................................................................................................2660.6740400000000
.....................................................................................................................................................................................TATATAAACTTCCTTCTACCTTTACTGAA...................................................................................................................................................................................2930.6720020000000
..............................................................................................................................TTCGTCGGCGTGCTCAGGATTT--------------------T............................................................................................................................................................................................................................2360.6740200100100
.......................................................................................................................................................................................TATAAACTTCCTTCTACCTTTACTG.....................................................................................................................................................................................2530.6720200000000
.....................................................................................................................................................................................TATATAAACTTCCTTCTACCT...........................................................................................................................................................................................2130.6720100000100
.........................................................................................................................................................................................TAAACTTCCTTCTACCTTTACTGAAAA.................................................................................................................................................................................2730.6720200000000
.....................................................................................................................................................................................TATATAAACTTCCTTCTACCTTTACA......................................................................................................................................................................................2630.6720110000000
.........................................................................................................................................................................................TAAACTTCCTTCTACCTTTACTGAATA.................................................................................................................................................................................2730.6720200000000
....................................................................................TA--------------------------TTGACGGATAATTCTTCGTCGGCGTG...........................................................................................................................................................................................................................................................2860.6740400000000
..........................................................TTCAGGATATTTGAATCCCAAAC---TA--------------------------.....................................................................................................................................................................................................................................................................................2530.6720110000000
.................................................................................................................TGACGGATAATTCTTCGTCGGCA.............................................................................................................................................................................................................................................................2360.6740400000000
....................................................................TTGAATCCCAAAC---TA--------------------------TTGACGGAT............................................................................................................................................................................................................................................................................2430.6720200000000
...................................................................................................................ACGGATAATTCTTCGTCGG...............................................................................................................................................................................................................................................................1960.6740100000300
........................................................................................................................TAATTCTTCGTCGGCGTGCTCAGGT....................................................................................................................................................................................................................................................2560.6740100000300
....................................................................................TA--------------------------TTGACGGATAATTCTTCGTC.................................................................................................................................................................................................................................................................2260.6740400000000
...................................................................TTTGAATCCCAAAC---TA--------------------------TTGACGGAT............................................................................................................................................................................................................................................................................2530.6720200000000
....................................................................................TA--------------------------TTGACGGATAATTCTTCGTCGGCGT............................................................................................................................................................................................................................................................2760.6740010000300
..........................................................TTCAGGATATTTGAATCCCAAAC---TA--------------------------TA...................................................................................................................................................................................................................................................................................2730.6720200000000
.................................................................................................................TGACGGATAATTCTTCGTCGGCGTT...........................................................................................................................................................................................................................................................2560.6740300100000
.....................................................................................................................................................................................................................................................................TTTCTTCTTCAAAATATTT-TTTTATA.....................................................................................................2650.6030300000000
........................................................................................................................................................................TTTGATCCCAAGCTATATAAACTTC....................................................................................................................................................................................................2550.6030300000000
..................................................................................................................................TCGGCGTGCTCAGGATTT--------------------TTTGA........................................................................................................................................................................................................................2350.6030300000000
...........................................................................................................................................TCAGGATTT--------------------TTTGATCCCAAGCT...............................................................................................................................................................................................................2350.6030030000000
...................................................................................................................................................T--------------------TTTGATCCCAAGCTATATAAACTT.....................................................................................................................................................................................................2550.6030300000000
..............................................................................AAC---TA--------------------------TTGACGGATAATTCTTCG...................................................................................................................................................................................................................................................................2350.6030300000000
...........................................................................CCAAAC---TA--------------------------TTGACGGATAATTCTTCG...................................................................................................................................................................................................................................................................2650.6030300000000
..................................................................................................................................................TT--------------------TTTGATCCCAAGCTATATAAACA......................................................................................................................................................................................................2550.6030000000300
...................................................................................................................................CGGCGTGCTCAGGATTT--------------------TTTGATCC.....................................................................................................................................................................................................................2550.6030210000000
droWil2
TAATACCAAAATCCA------AAATTAAAGTAT-------TAACTC-----------------AATATGCAAGTTCCATGCATTTGTCCTT-------------AAT-CCCATTAACTGACGCATTA---------TGAACGTCGTCT--------------------TTGTATTC-ATACAGGTTAGGCTTTTTTTGAA---CACACAATATAAATAAA------------------------CTTAT----AAAA----T------------TTTTTT-TTATAAAAAACTTAGAATTTTCCTTTAAATTTATATCTTTTTATACCCTTG------------------CAGAGGGTATTATAAAATTGGT--------CAGATGTTTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................................................................................................................................................CT--------------------TTGTATTC-ATACAGGTTAGGCTT.....................................................................................................................................................................................................2514.00420200
..........................................................................................................T-CCCATTAACTGACGCATTA---------TGAACGT......................................................................................................................................................................................................................................................2733.671110802
..................................................................................................................................................CT--------------------TTGTATTC-ATACAGGTTAGGCT......................................................................................................................................................................................................2413.00310200
........................................................................................................AAT-CCCATTAACTGACGCATTA---------TGAACG.......................................................................................................................................................................................................................................................2832.00641100
.................................................................................................................................................TCT--------------------TTGTATTC-ATACAGGTTAGGCT......................................................................................................................................................................................................2512.00210100
..........................................................................................................T-CCCATTAACTGACGCATTA---------TGAACG.......................................................................................................................................................................................................................................................2631.67501400
....................................................................................................................................................................................................TGAA---CACACAATATAAATAAA------------------------CTTAT----........................................................................................................................................2641.00440000
..................................................................................................................AACTGACGCATTA---------TGAACGTCGTCT--------------------.............................................................................................................................................................................................................................2511.00100100
..............................................................................................................................................................................TC-ATACAGGTTAGGCTTTTTTTGAA---CA........................................................................................................................................................................................2731.00330000
.................................................................................................................................................TCT--------------------TTGTATTC-ATACAGGTTAGGCTT.....................................................................................................................................................................................................2611.00110000
................................................................................................................TTAACTGACGCATTA---------TGAACGT......................................................................................................................................................................................................................................................2230.67200200
.................................................................................................................TAACTGACGCATTA---------TGAACGT......................................................................................................................................................................................................................................................2130.67200200
........................................................................................................AAT-CCCATTAACTGACGCATTA---------TGAACGT......................................................................................................................................................................................................................................................2930.33100100
........................................................................................................AAT-CCCATTAACTGACGCATTA---------TGAACT.......................................................................................................................................................................................................................................................2830.33100100
........................................................................................................................................................................TTGTATTC-ATACAGGTTAGGCTTTT...................................................................................................................................................................................................2530.33100100
........................................................................................................................................................................TTGTATTC-ATACAGGTTAGGCTTTTTT.................................................................................................................................................................................................2730.33100100
............................................................................................................CCCATTAACTGACGCATTA---------TGAACG.......................................................................................................................................................................................................................................................2530.33100100
..............................................................................................................CATTAACTGACGCATTA---------TGAACGTCG....................................................................................................................................................................................................................................................2630.33100100
...........................................................................................................................................................................TATTC-ATACAGGTTAGGC.......................................................................................................................................................................................................1830.33110000
.........................................................................................................................................................................TGTATTC-ATACAGGTTAGGCTTTTTT.................................................................................................................................................................................................2630.33100100
........................................................................................................................................................................TTGTATTC-ATACAGGTTAGGCT......................................................................................................................................................................................................2230.33100100
.........................................................................................................AT-CCCATTAACTGACGCATTA---------TGAACGT......................................................................................................................................................................................................................................................2830.33100100
.................................................................................................................................................................................................TTTTGAA---CACACAATATAAATAAA------------------------CT...............................................................................................................................................2650.20110000
..............................................................................................................................................................................................TTTTTTTGAA---CACACAATATAAATAAA------------------------CT...............................................................................................................................................2950.20110000
........................................................................................................................................................................................................................................................................................................................TATATCTTTTTATACCCTTG------------------C......................................2170.14101000
.........................................................................................................................................................................................................................................................................................................................................TTG------------------CAGAGGGTATTATAAAATTGG..................24200.05100010
droVir3
GGCTAG----------------------------------------------------TTAGAAAATTTTGAATAAAAAGA---AATTCTCTGCTTTTTTTTCGTGA-GCTGTTTAT------------------------GAGATTTTCTAACATATCTGAAGAGCCA------------TAGATCCTT----T--TTGAGTTG------GAATTTTGG-----------------------------------GT------------------------------------------------------TTTCTTTTTTTTATACCCTGAACCA-TTAAAAATGGG-TATGAGGGTATATTGTATTTGTGCGAAA-TCCAAATGTATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................................................................................................................................................................................................................................................................................................TTAAAAATGGG-TATGAGGGTATATTG.........................26200.255000000001000000000000000101000010000010000000000000000000000000
.........................................................................................................................................................................................................................TGG-----------------------------------GT------------------------------------------------------TTTCTTTTTT....................................................................15180.112000000000000000000000000000000000000000000000000000000000000002
.................................................................................................................................................................................................................................................................................................................................................TTAAAAATGGG-TATGAGGGTAT.............................22200.102000000101000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................TAAAAATGGG-TATGAGGGT...............................19200.102001000000000000000000001000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................TTAAAAATGGG-TATGAGGGTATAT...........................24200.051000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................ATATTGTATTTGTGCGAAA-TCC........22200.051001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................TAAAAATGGG-TATGAGGGTA..............................20200.051000000000010000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................TTAAAAATGGG-TATGAGGGTATATTGT........................27200.051000000000000000000000000100000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................AATGGG-TATGAGGGTATATTG.........................21200.051000000000000000000000000001000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................AAAATGGG-TATGAGGGTATATTGTAT......................26200.051000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................ATTTGTGCGAAA-TCCAAATG...20200.051000000000000000000000000000000100000000000000000000000000000000
droMoj3
TC-------------------------------------------CGGCGGCGGCGA-----GGGTACTAGAGTCCGACGT---TCAATCC---TC-------------------------AT---TTCGCCTCCGCT-GCAGGATTCC-------------------CTTGACTTTCAGCCTCGAC----------------------------TATAGCTTTCTTCCTTGTTTTTTTTTTTT-TT-TTTTT--TTTTTCTTTTCTTTCCTTCTCCTTT-TTATAC----------------------------------------CCTGAACCCATATTCAATGGGAAATCAGGGTATAATGGTTTTGT---------TAAATGTATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................................................................................................................................................................................................................................................................................................................TGGGAAATCAGGGTATAATGGTTT.....................24200.051001000
droGri2
CCAAACA-AACAATA------AAC-----------------------------AATTCTTCAGAATGTTTGTA--------------------------------TTATTTATTTTCGTAT-------------------------TT--------------------TTTAATCCA-----------------T--TTCAATTG------AAATTTTTA------------------------------------------------------------------------------------AATACATTTTTTCTTTTTCATTCCCCGAACAAATTGAGAATGGCTAAATTGGGTATAATGAAGTTGTGCAAAA--TTAATAGAGTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
AATTCCCAATAT-------------------------------------------------------------------------ATTTGT-------------ATT-TTTATTGACGGATATTCCTACGTCGGCGTTCTAAGGATTT--------------------TTCATTCCCAAGCTTTTCTCACAATTTTCAACAAATAATGAATCTGTGTTTT-----------------------------------CTCTACTATTATCATCAAAATATTT-TTATAC----------------------------------------CCTTG------------------CAGAGGGTATTATAATTTTGGT--------CAAAAGTGTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
TTAA-----------------------AATTTATGACAGATAAATCGTCGACGGCGCGTTTGCGATTTCTTGATCCCAAAC---CTTTTAC-------------TTT-TTTGTTGACGGATAATTTTTCGTCGGCGTGCTCAGGATTT--------------------GTAGATCCCAAGCTTAATAAACTGTTT--TTCAACCACAGATTCTGGTTGGA-----------------------------------TTTCTTTTTCCTCATCAAAGTATTT-TTTTATTATATACTC---------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
ACATTCCAAACGATTTTTATTTAT-TTGATTTTTGACGGTATTTTCTTCGTGGGCACTCTCAGGATTTTCGAATCCCAAGA---TATTGGT-------------ATT-TTTATTGTCGGATATTTCTACGCCGGCGTTCTCAGGATTT--------------------TCGAATCTCAAGCTTTTCTCACTATTTTCCACAAATAATGAATC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
AGATCCCAAGCT-------------------------------------------------------------------------TTTTTT----------TAATTT-TTTGTTGACGGATAATTCTACGTCGGCGTGCTCAGGATTT--------------------GTAGATCCCAAGCTGAATGAACTTTTTTCAACCATTACAGATTCTGGTTGGA-----------------------------------TTTCTTTTTGCTCATCAAAGTATTT-ATTTATTATATACTC---------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
GGATCCCAAACTATA------CATTTTTTTTGTTGACGGATGATTCTACGTCGGCGTGTTGAGGATTTTTAGATCCAAAAC---TATTTGA-------------TTT-TTTGTTTACGGATAATTCTACGTCGGCTTGCTCAGGATTT--------------------TGTGATTCAAAGCTAATTAAACTTTGTTCCACCATTTGTGATTCTGTTTTAA-----------------------------------TTCCACTTTGCTCTACAAGGTATTT-TTATAC----------------------------------------CCTTG------------------CAGAGCGTATTATAATTTCAGT--------CAGAAGTTTSizeHit CountTotal NormTotal
No Reads
droRho1
ATTTCCCAAACT-------------TTTATTATTGTCGGATATTTCAACGACGGCGTGTTCAGGATTTGTAATTCCCAGAC---T-------------------TTT-ATTATTGTCGGATATTTCAACGACGGCGTGTTCAGGATTT--------------------TTATATCCCGAACTAAATTCACTTTTATTACCCATTTCAGATTCCGATCTGA-----------------------------------TTTGAGCCATTTCATCAAAGTATTT-TTATACCCGTTACTC--------GTAGA--------------------------------------G-TAAAAGGGTATATTGTATTCGTG--------CAAAAGTATSizeHit CountTotal NormTotal
No Reads
droBia1
AAGTCCCAAGATATG------TGT----ATTTTTGACGGATATTTCTACGTCGGCACTCTCTTCATTTTTAATTCCCAAGA---TATTTTT-------------ATT-TTTATTGACGGATATTTCTACGTCGGCGTTTTTAGGATTT--------------------TCGAATCCCAAATCTTTCTTACTATGTTCCACAAATAATGAATCTGTATCTT-----------------------------------TACTACTTTTATCTTCATATTTTTT--TATAATAAATTATT--------TTAAAGTTGGAATATTATTATACCCTTG------------------CAGAGGG-------------------------------TSizeHit CountTotal NormTotal
No Reads
droTak1
AATTCCCACACT-------------TTTATTGTTGTCGGATAATTCAACGACGGCTTGTTCGGGATTTTTAGTTCCCAAAC---TT-------------------AT-ATTTTTGTCGGATAATTCAACGACGGCGTGTTCAGGATTT--------------------TTAATTCCCAAACTAAATTCGCTTTGATTTGCCATTTCAGATTCGGATCTGA-----------------------------------CTCGGGTCTTTTCATCAAAGTATTT-TTATAC----------------------------------------CCTTG------------------TAGAGGGTAGTATAATTTCAGT--------CAGATGTTTSizeHit CountTotal NormTotal
No Reads
droEug1
AATTCCCCAAAT-------------TTTATTTTTGTCGGATATTTCAAGGACGTCGCGTTCGGAATTTTTGAATTCCAAAC---TT-------------------TT-ATTTTTGTCGGATTTTTCAACGACGGCGTGTTCAGGATTT--------------------TTATATTCCAAACTAGATTCGCTTTGATTACCCATTTCAGATTCGGATCTGA-----------------------------------AT----TTTTTTCATCAAAGTATTTTTTATACCCGTTACTC--------GTAGA--------------------------------------G-TAAAAGGGTATACTAGATTCGTT--------GAAAAGTATSizeHit CountTotal NormTotal
No Reads
dm3
TATTATTAAATTATG------AAT-TTTTTCTTTGTCGGAAAATTCAACGACGGCGTGTTCAGGATTTGTGGATCTCAAAC---TAATAGT-------------CTT-TTTGTTAACGGATAGTTCAACGTCGGCGTGCTCAGGATTC--------------------TTTGATCTCAAGCTATATAAACTTCCTTCACTCATTACCGTTTAGGTTTTAA-----------------------------------ATACATTTTGTTCATCAAAGTATTA-TTTTA-------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................AT-TTTTTCTTTGTCGGAAAAT.........................................................................................................................................................................................................................................................................................................................................................211214.17170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000353626215200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................TCAACGTCGGCGTGCTCAGGATTC--------------------TTT..........................................................................................................................................................................................................................27713.4394000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000020104320000000000000000000000000000000000110000103100020100001000000003060141100000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000001024000000
...........TATG------AAT-TTTTTCTTTGTCGGAAAAT.........................................................................................................................................................................................................................................................................................................................................................26211.50230000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000004930500000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................TTCAACGTCGGCGTGCTCAGGATTC--------------------.............................................................................................................................................................................................................................2579.8669000000000000000000000000000000000000000100000010000000000000000000000000000000010000100000000000100000000000000000000000000000000011000000010100000100100000000000000000000000000000000000001010000000000000000003900000002012013800000000000000000000000000000000000000000000000000000000000000000010000000001200000000000000000001400000
..............................................................................................................................AACGTCGGCGTGCTCAGGATTC--------------------TTT..........................................................................................................................................................................................................................2579.716800000000000000000000001000000000000000000010000110000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000011021050100000000000000000000000000000000000002000000600000000400000002000007000100000000000000000000000000000000000000000000000000000000000001000000000000000300000000000000000312200000
............................................................................................................................TCAACGTCGGCGTGCTCAGGATTC--------------------TT...........................................................................................................................................................................................................................2677.0049000000000000000000000000000000000000000000000001100000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000002000400000000000000000000000000000000000000000000000000200000000500000012010010500000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000001300000
...........................................................................................................................................TCAGGATTC--------------------TTTGATCTCAAGCTATA............................................................................................................................................................................................................2616.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000301010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................TTCAACGTCGGCGTGCTCAGG.....................................................................................................................................................................................................................................................21205.801160000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011005000000000002110000100000000000000000000000000000000000100000010120000000000000000003020002000000000000000000000000000000000000000000000110003500000000000000030100000100320000000000000000013301000
.....................................................GCGTGTTCAGGATTTGTGGA............................................................................................................................................................................................................................................................................................................................2045.502200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000031114200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.............................................................................................................................CAACGTCGGCGTGCTCAGGATTC--------------------TTT..........................................................................................................................................................................................................................2675.143600000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000101010000000000000000000000000000000000001001000000000000000000000000002203011600000000000000000000000000000000000000000000000000000000000000000000110100000000000000000000000001100000
........................................................................................................................TAGTTCAACGTCGGCGTGCTCAGGAT...................................................................................................................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000100000000000000000001020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................TAGTTCAACGTCGGCGTGCTCAGGA....................................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000100000100000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.................................................................TTTGTGGATCTCAAAC---TAATA............................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................TTCAACGTCGGCGTGCTCAGGATTC--------------------TT...........................................................................................................................................................................................................................2774.86340000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000001000000000010030000000000000000000000000000000000000000100000030000000000000000000010500070000000000000000000000000000000000000000000000000000000000000000000001000000001000000000000000000900000
.............................TCTTTGTCGGAAAATTCAACGACGGC..............................................................................................................................................................................................................................................................................................................................................2664.33260000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000200050000400000000201000000000000000000000000000000000000000000000000000000000000000003000500020000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...........TATG------AAT-TTTTTCTTTGTCGG..............................................................................................................................................................................................................................................................................................................................................................21204.3086000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000010001000000000100200000000000000000010000000000000000000010000000002000000000000000001005000000000000000000000000000000000000000000000000013004440000000000000004020000010000000000010000000000000000
...........................................................................................................................TTCAACGTCGGCGTGCTCAGGATTC--------------------TTT..........................................................................................................................................................................................................................2874.293000000000000000000000000000000000000000000000000000000000000000000000000000000022000000000000000000000000000000000000000000000000000000000000000001000030000000000000000000000000000000000000000000000000000000000000000000301000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001300000
...................................................................TGTGGATCTCAAAC---TAATAGT-------------.............................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000010000000000000000000000000
...............................................................................................................................ACGTCGGCGTGCTCAGGATTC--------------------.............................................................................................................................................................................................................................2174.002800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002210000000000000000000000000000000000000000000000400000
...........TATG------AAT-TTTTTCTTTGTCGGAAAATT........................................................................................................................................................................................................................................................................................................................................................2724.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................TTAACGGATAGTTCAACGTCGGCGTGC..........................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TTATG------AAT-TTTTTCTTTGTCG...............................................................................................................................................................................................................................................................................................................................................................21203.8577000000000000000000000000000000000000001100030006392010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010602060000000000000000000000000000000000000000000000000000000000006000000000000000000000010000000000000000000000000000000000001000000000000000000000100000000000000200000001001500000
.............TG------AAT-TTTTTCTTTGTCGGAAAATT........................................................................................................................................................................................................................................................................................................................................................2523.5070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005100000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................CAACGTCGGCGTGCTCAGGATTC--------------------TT...........................................................................................................................................................................................................................2573.43240000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000004000000000000000000000000000000000000100000100000000000000000100030500310000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000300000
.................................TGTCGGAAAATTCAACGACGGCGTG...........................................................................................................................................................................................................................................................................................................................................2533.33100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000005000000000210010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................TTCAACGTCGGCGTGCTCAGGATTC--------------------T............................................................................................................................................................................................................................2673.29230000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000010000000021000000000065000100000000010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000300000
.................................................................................................................TAACGGATAGTTCAACGTCGGCGTGC..........................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TTCAGGATTTGTGGATCTCAAAC---TAA..............................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................TTTGATCTCAAGCTATATAAACTT.....................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TTATG------AAT-TTTTTCTTTGTCGGAAAAT.........................................................................................................................................................................................................................................................................................................................................................2723.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................TC--------------------TTTGATCTCAAGCTATATAAACT......................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................TGCTCAGGATTC--------------------TTTGATCTCAAGCTA..............................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................TTC--------------------TTTGATCTCAAGCTATATAAACT......................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................CGTCGGCGTGCTCAGGATTC--------------------T............................................................................................................................................................................................................................2172.862000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000003002120000000000000001100000000000000000000000000000000000
............................................................................................................................TCAACGTCGGCGTGCTCAGGA....................................................................................................................................................................................................................................................21202.855700000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000100000000000000000000000000010000000000000000000000000000000000000000000000000000100000000000000000000001001000000000000000000000000000000000000000000000000000000007330000000000000000811000000100000000000000000000000000
.............TG------AAT-TTTTTCTTTGTCGGAAAAT.........................................................................................................................................................................................................................................................................................................................................................2422.5050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................TGTTCAGGATTTGTGGATCTCAAAC---.................................................................................................................................................................................................................................................................................................................2522.5050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020200000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................TCGGCGTGCTCAGGATTC--------------------TTTGATC......................................................................................................................................................................................................................2572.43170000000000000000000000000000000000000000000000000000000000000000000000000000003100002000000000001000000000000000000000000000000000001001000000000000000000000000000000000000000000000000000000000100000000000000000000000020300110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................GCGTGTTCAGGATTTGTGGAT...........................................................................................................................................................................................................................................................................................................................2142.2590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002300100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000010000100
.....................AAT-TTTTTCTTTGTCGGAAAAT.........................................................................................................................................................................................................................................................................................................................................................2262.17130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006010600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................CGTGCTCAGGATTC--------------------TTTGATC......................................................................................................................................................................................................................2182.13170000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006123100000000000000000100020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................TTC--------------------TTTGATCTCAAGCTATATAAACTT.....................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................TGCTCAGGATTC--------------------TTTGATCTCAAGC................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................TCAGGATTC--------------------TTTGATCTCAAGCTA..............................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................CGTGCTCAGGATTC--------------------TTTGATCTCAAGC................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................TTAACGGATAGTTCAACGTCGGCGT............................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................TAATAGT-------------CTT-TTTGTTAACGGATAGT.........................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................TAACGGATAGTTCAACGTCGGCGTG...........................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................CTCAGGATTC--------------------TTTGATCTCAAGCTA..............................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................GCGTGTTCAGGATTTGTGGATC..........................................................................................................................................................................................................................................................................................................................2242.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000412000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
........................................................................................................................TAGTTCAACGTCGGCGTGCTCAGGATT..................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................CTCAGGATTC--------------------TTTGATCTCAAGCTATA............................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................TCAAAC---TAATAGT-------------CTT-TTTGTTAACGGA.............................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................AAACTTCCTTCACTCATTACCGTT...................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................CGTGTTCAGGATTTGTGGAT...........................................................................................................................................................................................................................................................................................................................2062.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002502300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................TCAACGTCGGCGTGCTCAGGATTC--------------------T............................................................................................................................................................................................................................2571.86130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000001000000000010000000020000320000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000200000
............ATG------AAT-TTTTTCTTTGTCGGA.............................................................................................................................................................................................................................................................................................................................................................21201.85370000000000000000000000000000000000000000000000000000000000000000000000000000002260000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000200000000000000000000530010000000000000000000000000000000000000000000001000000000000000000000020000000000001000100000000000900000
..............................................................................................................................AACGTCGGCGTGCTCAGGATT..................................................................................................................................................................................................................................................21201.70340000000000000000000000000000000000000100000200100000000001000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000300110800000000000000000000000000000000000000000000000001000400000000000000001110010000030000000000000000001000000
...............................................................................................................................ACGTCGGCGTGCTCAGGATTC--------------------TTTGAT.......................................................................................................................................................................................................................2761.67100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000020000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000600000
......................AT-TTTTTCTTTGTCGGAAAATT........................................................................................................................................................................................................................................................................................................................................................22121.50180000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002370600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TTTGTCGGAAAATTCAACGACGGCGTG...........................................................................................................................................................................................................................................................................................................................................2721.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TCTTTGTCGGAAAATTCAACGACGGCG.............................................................................................................................................................................................................................................................................................................................................2761.5090000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100100000110000000000000000000000000000000000000000000000000000000000000000000000101100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TCTTTGTCGGAAAATTCAACGACGG...............................................................................................................................................................................................................................................................................................................................................2571.43100000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000200000000000002000000000000000000000000000000000000000000000000000000000000000100001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................GTCGGCGTGCTCAGGATTC--------------------TT...........................................................................................................................................................................................................................2171.43100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000260000000000000000200000000000000000000000000000000000
...............................................................................................................................ACGTCGGCGTGCTCAGGATT..................................................................................................................................................................................................................................................20201.352700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000220000000000000000400000000000000000000000000000000000
...........................................TTCAACGACGGCGTGTTCAGGATTTG................................................................................................................................................................................................................................................................................................................................2631.3340000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..............................................AACGACGGCGTGTTCAGGATT..................................................................................................................................................................................................................................................................................................................................2131.3340000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000
.............................................................................................................................CAACGTCGGCGTGCTCAGGATTC--------------------T............................................................................................................................................................................................................................2471.2990000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000001100000320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................TTCAACGTCGGCGTGCTCAGGATT..................................................................................................................................................................................................................................................24201.15230000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000110000000000000000000000000000000000000000000010000000100000000000000010803500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................CGGATAGTTCAACGTCGGCGTGC..........................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................TATAAACTTCCTTCACTCATTACCGT....................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................AGGATTC--------------------TTTGATCTCAAGCTATA............................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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droSim2
TATTTTTAGATTATG------AAT-TTTTTCTTTGTCGGAAAATTCAACGACGGCGTGTTCAGGA--------TCCAAAAC---TAATAGT-------------TTT-TTTGTTGACTGATAACTCAACGTCGACGTGCTCAGGATTC--------------------TTTGATCCCAAGCTATAAAAACTTCCTTCGCTCATTACCGTTTCGGTTTTAA-----------------------------------ATACTTTTTGTTCATCAAAGTATTT-TTTTATAATATATTC---------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
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...........TATG------AAT-TTTTTCTTTGTCGGA.............................................................................................................................................................................................................................................................................................................................................................22103.6036000003111002001000
........................................................................................................................TAACTCAACGTCGACGTGCTCAGGA....................................................................................................................................................................................................................................................2513.00300100002000000000
.................................................................................................................................................TTC--------------------TTTGATCCCAAGCTATAAAAACT......................................................................................................................................................................................................2623.00600000002031000000
...........................................................................................................................CTCAACGTCGACGTGCTCAGGATT..................................................................................................................................................................................................................................................2412.00200200000000000000
.....................................................................................................................TGATAACTCAACGTCGACGTGCTCAGGA....................................................................................................................................................................................................................................................2812.00200000000010010000
..............................................................................................................................AACGTCGACGTGCTCAGGATTC--------------------TTT..........................................................................................................................................................................................................................2541.75700000032011000000
............................................................................................................................TCAACGTCGACGTGCTCAGGATTC--------------------TT...........................................................................................................................................................................................................................2641.50600010010310000000
.................................................................................................................................................TTC--------------------TTTGATCCCAAGCTATAAAAAC.......................................................................................................................................................................................................2521.50300000000030000000
........................................................................................................................................................................TTTGATCCCAAGCTATAAAAACTTCC...................................................................................................................................................................................................2621.50300000000002010000
...........................................TTCAACGACGGCGTGTTCAGGA--------T...........................................................................................................................................................................................................................................................................................................................2331.33400000020200000000
............................................................................................................................TCAACGTCGACGTGCTCAGGATTC--------------------TTT..........................................................................................................................................................................................................................2741.25500000031001000000
....................................................................................................................................GACGTGCTCAGGATTC--------------------TTTGATCCCA...................................................................................................................................................................................................................2641.25500000010310000000
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..............................................................................................................TGTTGACTGATAACTCAACGTC.................................................................................................................................................................................................................................................................2211.00100000000000010000
................................................................................................................TTGACTGATAACTCAACGTCGACGTG...........................................................................................................................................................................................................................................................2611.00100000000010000000
.....................................................................................................................TGATAACTCAACGTCGACGTGCT.........................................................................................................................................................................................................................................................2311.00100000000000010000
..........TTATG------AAT-TTTTTCTTTGTCGGAAAATT........................................................................................................................................................................................................................................................................................................................................................2811.00100000000001000000
...........................................TTCAACGACGGCGTGTTCAGGA--------TCCA........................................................................................................................................................................................................................................................................................................................2611.00100000000000010000
..............................................................................................................TGTTGACTGATAACTCAACGTCGACG.............................................................................................................................................................................................................................................................2611.00100000000000010000
.............................................................................................................................................................................TCCCAAGCTATAAAAACTTCCTTCGCT.............................................................................................................................................................................................2721.00200000010100000000
......................................................................................................................GATAACTCAACGTCGACG.............................................................................................................................................................................................................................................................1811.00100000000001000000
...........................................TTCAACGACGGCGTGTTCAGGA--------TCCAAAAC---.................................................................................................................................................................................................................................................................................................................3011.00100000001000000000
........................................................................................................................TAACTCAACGTCGACGTGCTCAGGAT...................................................................................................................................................................................................................................................2611.00100000000010000000
...........TATG------AAT-TTTTTCTTTGTCGGAAA...........................................................................................................................................................................................................................................................................................................................................................24100.80800510001000010000
...........TATG------AAT-TTTTTCTTTGTCGGAA............................................................................................................................................................................................................................................................................................................................................................23100.70700100001300002000
.........................................................................................................................................................................TTGATCCCAAGCTATAAAAACT......................................................................................................................................................................................................2220.50100000010000000000
..............................................................................................................................AACGTCGACGTGCTCAGGATTC--------------------T............................................................................................................................................................................................................................2340.50200000001010000000
.............TG------AAT-TTTTTCTTTGTCGGAAAAT.........................................................................................................................................................................................................................................................................................................................................................2420.50100010000000000000
............ATG------AAT-TTTTTCTTTGTC................................................................................................................................................................................................................................................................................................................................................................18140.50700000000007000000
................................................................................................................................................................................................CCTTCGCTCATTACCGTTTCGGTTT............................................................................................................................................................................2520.50100000001000000000
........................................................................................................................................................................TTTGATCCCAAGCTATAAAAACTTCCTT.................................................................................................................................................................................................2820.50100000000010000000
..................................................................................................................................................TC--------------------TTTGATCCCAAGCTATAAAAACT......................................................................................................................................................................................................2520.50100000000010000000
.............................................................................................................................................................................TCCCAAGCTATAAAAACTTCCTTCGC..............................................................................................................................................................................................2620.50100000000000010000
.................................................................................................................................GTCGACGTGCTCAGGATTC--------------------TT...........................................................................................................................................................................................................................2140.50200000000002000000
.............................................................................................................................CAACGTCGACGTGCTCAGGATTC--------------------TT...........................................................................................................................................................................................................................2540.50200000001100000000
.............TG------AAT-TTTTTCTTTGTCGGAAAATTT.......................................................................................................................................................................................................................................................................................................................................................2620.50100000000100000000
.............TG------AAT-TTTTTCTTTGTCGGAAA...........................................................................................................................................................................................................................................................................................................................................................22110.45500200020100000000
...........TATG------AAT-TTTTTCTTTGTCGGAATT..........................................................................................................................................................................................................................................................................................................................................................25100.40400100030000000000
.................................................................................................................................................................................................................TTCGGTTTTAA-----------------------------------ATACTTTTTGTTCATC......................................................................................................................2730.33100000000010000000
........................................................................................................................................TGCTCAGGATTC--------------------TTTGATCCCAAGCTA..............................................................................................................................................................................................................2730.33100000000001000000
...........................................TTCAACGACGGCGTG...........................................................................................................................................................................................................................................................................................................................................1570.29200000000002000000
.............TG------AAT-TTTTTCTTTGTCGGAAAA..........................................................................................................................................................................................................................................................................................................................................................23110.27300000000300000000
..............................................................................................................................AACGTCGACGTGCTCAGGATTC--------------------TTTGA........................................................................................................................................................................................................................2740.25100000000010000000
........................................AAATTCAACGACGGCGTGTTCAGG.....................................................................................................................................................................................................................................................................................................................................2440.25100000000000010000
...................................TCGGAAAATTCAACGACGGCGTG...........................................................................................................................................................................................................................................................................................................................................2340.25100000000100000000
............................................................................................................................TCAACGTCGACGTGCTCAGGATTC--------------------T............................................................................................................................................................................................................................2540.25100000010000000000
..............................................................................................................................AACGTCGACGTGCTCAGGATTC--------------------.............................................................................................................................................................................................................................2240.25100000000001000000
.................................................................................................................................GTCGACGTGCTCAGGATTC--------------------TTTGATC......................................................................................................................................................................................................................2640.25100000001000000000
..................................................................................................................................TCGACGTGCTCAGGATTC--------------------.............................................................................................................................................................................................................................1840.25100000000001000000
............................................TCAACGACGGCGTGTTCAGGA--------............................................................................................................................................................................................................................................................................................................................2140.25100000000001000000
.................................................................................................................................GTCGACGTGCTCAGGA....................................................................................................................................................................................................................................................1640.25100000000001000000
...........................................TTCAACGACGGCGTGTTCAGG.....................................................................................................................................................................................................................................................................................................................................2140.25100000010000000000
.............................................................................................................................CAACGTCGACGTGCTCAGGATTC--------------------TTT..........................................................................................................................................................................................................................2640.25100010000000000000
..................................................................................................................................TCGACGTGCTCAGGATTC--------------------TTTGATCCCA...................................................................................................................................................................................................................2840.25100000001000000000
...........................................TTCAACGACGGCGTGTTCAGGA--------............................................................................................................................................................................................................................................................................................................................2240.25100010000000000000
........................................AAATTCAACGACGGCGTGTTCAGGA--------............................................................................................................................................................................................................................................................................................................................2540.25100000000001000000
.....................................................................................................................................................................................................................................................................TTTGTTCATCAAAGTATTT-TTTTA.......................................................................................................2450.20100000000010000000
............................TTCTTTGTCGGAAAATTCAA.....................................................................................................................................................................................................................................................................................................................................................2050.20100000000000001000
........................................AAATTCAACGACGGCGTGTTCAG......................................................................................................................................................................................................................................................................................................................................2350.20100000000000010000
..........TTATG------AAT-TTTTTCTTTGTCGGAAA...........................................................................................................................................................................................................................................................................................................................................................25100.20200000010010000000
..........TTATG------AAT-TTTTTCTTTGTCGGAATT..........................................................................................................................................................................................................................................................................................................................................................26100.20200000020000000000
..........TTATG------AAT-TTTTTCTTTGTCGGAAAA..........................................................................................................................................................................................................................................................................................................................................................26100.20200010000000010000
...........TATG------AAT-TTTTTCTTTGTCGG..............................................................................................................................................................................................................................................................................................................................................................21100.20200000001000001000
.............TG------AAT-TTTTTCTTTGTCGGA.............................................................................................................................................................................................................................................................................................................................................................20110.18200000020000000000
........................................AAATTCAACGACGGCGTGTTCA.......................................................................................................................................................................................................................................................................................................................................2260.17100000000001000000
..........TTATG------AAT-TTTTTCTTTGTC................................................................................................................................................................................................................................................................................................................................................................20130.15200000000002000000
........................................AAATTCAACGACGGCGTGTTC........................................................................................................................................................................................................................................................................................................................................2170.14100000000001000000
.......................T-TTTTTCTTTGTCGGAAA...........................................................................................................................................................................................................................................................................................................................................................18140.14200000000101000000
.........................TTTTTCTTTGTCGGAAA...........................................................................................................................................................................................................................................................................................................................................................17150.13200000000200000000
..........TTATG------AAT-TTTTTCTTTGTCGG..............................................................................................................................................................................................................................................................................................................................................................22100.10100000010000000000
..........TTATG------AAT-TTTTTCTTTGTCGGA.............................................................................................................................................................................................................................................................................................................................................................23100.10100000010000000000
............ATG------AAT-TTTTTCTTTGTCGGT.............................................................................................................................................................................................................................................................................................................................................................21110.09100000000001000000
.............TG------AAT-TTTTTCTTTGTCGG..............................................................................................................................................................................................................................................................................................................................................................19110.09100000000001000000
.....................AAT-TTTTTCTTTGTCGGAAA...........................................................................................................................................................................................................................................................................................................................................................20110.09100000000001000000
............ATG------AAT-TTTTTCTTTGTCGGAA............................................................................................................................................................................................................................................................................................................................................................22110.09100100000000000000
.....................AAT-TTTTTCTTTGTCGGAAAA..........................................................................................................................................................................................................................................................................................................................................................21110.09100100000000000000
.............TG------AAT-TTTTTCTTTGTCGGAA............................................................................................................................................................................................................................................................................................................................................................21110.09100000010000000000
......................AT-TTTTTCTTTGTCGGAAA...........................................................................................................................................................................................................................................................................................................................................................19120.08100000000001000000
...........TATG------AAT-TTTTTCTTTGT.................................................................................................................................................................................................................................................................................................................................................................18130.08100100000000000000
.......................T-TTTTTCTTTGTCGGAAAA..........................................................................................................................................................................................................................................................................................................................................................19140.07100000000001000000
.............TG------AAT-TTTTTCTTTGTC................................................................................................................................................................................................................................................................................................................................................................17140.07100000000001000000
............................TTCTTTGTCGGAAAA..........................................................................................................................................................................................................................................................................................................................................................15160.06100000000001000000
.........................................................................................................................................................................................................ATTACCGTTTCGGTTT............................................................................................................................................................................16190.05100000000001000000
..........TTATG------AAT-TTTTTCTT....................................................................................................................................................................................................................................................................................................................................................................16200.05100000000001000000
droSec2
TATTTTCAGATTATG------CAT-TTTTTATTTGTCGGGAAATTCAACGACGGCGTGTTCAGGATTTGTGGATCCCAAAC---TATTCGTTT--------TTTTTT-TTTGTTAACGGATAATTCAACGTCGGCGTGCCCAAGATTC--------------------TTTGATCCCAAGCTATATCAACTTTCCTCTCTCATTACAGTTTCGATTCTAA-----------------------------------ATACTTTTTGTTCATCAAGGTTTTT-TTATAACAAATTCTT--------ATCAT-------------------------------------------------------------------------------GSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................................................................................................................................................................TCCCAAGCTATATCAACTTTCCTC................................................................................................................................................................................................2411.0011000
..............................................................................................................................................................................................TTTCCTCTCTCATTACAGTTTCGATTC............................................................................................................................................................................2720.5011000
..............................................AACGACGGCGTGTTCAGGATTTGTGGA............................................................................................................................................................................................................................................................................................................................2740.2511000
...........................................TTCAACGACGGCGTGTTCAGGATT..................................................................................................................................................................................................................................................................................................................................2460.1710010
droYak3
TATTATTAGATTATG------AAT-TTTTTCTTTGTCGGAAAATTCAACGACGGCGTGTTCAGGATTTGTGGATCCCAAAC---TATTAGT-------------TTT-ATTGTTGACGGATAATTCAACGTCGGAGTGATCAGGATTT--------------------TTTGATCCCAAGCTTTTTGATTGTAAT------TTGACGGAATTA------A-----------------------------------CATCGTCGGCTTGTTCAGGATTTTT-TGATCCCAAACTTTT--------CAATT------------------------------------------------------GTAATTTGACGGAATTACCATCGTCGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................TGTCGGAAAATTCAACGACGGCGTG...........................................................................................................................................................................................................................................................................................................................................25207.4014802600000000122
.............................TCTTTGTCGGAAAATTCAACGACGGCGTG...........................................................................................................................................................................................................................................................................................................................................29203.7074000000000074
...............................TTTGTCGGAAAATTCAACGACGGCGTG...........................................................................................................................................................................................................................................................................................................................................27203.1062000000000062
............................................TCAACGACGGCGTGTTCAGGATTTGT...............................................................................................................................................................................................................................................................................................................................26203.1062000000000062
....................................................................................................................................................................................................................................................................................................................T------------------------------------------------------GTAATTTGACGGAATTACCATCGTC.2652.201109200000000
................................TTGTCGGAAAATTCAACGACGGCGTG...........................................................................................................................................................................................................................................................................................................................................26202.0541000000000041
..................................................................................................................................TCGGAGTGATCAGGATTT--------------------TTTGATCC.....................................................................................................................................................................................................................26201.8036003600000000
........................................................................................................................TAATTCAACGTCGGAGTGATCAGGA....................................................................................................................................................................................................................................................25201.6032100000000031
...................................................................................................................................................................................................................................................................................................................TT------------------------------------------------------GTAATTTGACGGAATTACCATCGTC.2751.60806200000000
.............................TCTTTGTCGGAAAATTCAACGACGGCG.............................................................................................................................................................................................................................................................................................................................................27201.4529020000000027
..............................................................................................................TGTTGACGGATAATTCAACGTCGGAGT............................................................................................................................................................................................................................................................27201.4028000000000028
............................................TCAACGACGGCGTGTTCAGGATTTGTG..............................................................................................................................................................................................................................................................................................................................27201.3527050000000022
............................TTCTTTGTCGGAAAATTCAACGACGGCG.............................................................................................................................................................................................................................................................................................................................................28200.9018000000000018
...........................................TTCAACGACGGCGTGTTCAGGATTTGTG..............................................................................................................................................................................................................................................................................................................................28200.8016000000100015
..................................................................................................................................TCGGAGTGATCAGGATTT--------------------TTTGATCCC....................................................................................................................................................................................................................27130.771002100000007
............................TTCTTTGTCGGAAAATTCAACGACGGCGT............................................................................................................................................................................................................................................................................................................................................29200.7515000000000015
...........................................TTCAACGACGGCGTGTTCAGGATTTGTGGA............................................................................................................................................................................................................................................................................................................................30200.7515000000000015
.............................................CAACGACGGCGTGTTCAGGATT..................................................................................................................................................................................................................................................................................................................................22200.7014000000000014
..............................................AACGACGGCGTGTTCAGGATTTGTGGA............................................................................................................................................................................................................................................................................................................................27200.7014030000000011
............................TTCTTTGTCGGAAAATTCAACGACGGCGTG...........................................................................................................................................................................................................................................................................................................................................30200.7014000000000014
............................TTCTTTGTCGGAAAATTCAACGACGG...............................................................................................................................................................................................................................................................................................................................................26200.7014000000000014
.................................................................................................................TGACGGATAATTCAACGTCGGAGTGA..........................................................................................................................................................................................................................................................26200.7014000000000014
..................................................................................................................GACGGATAATTCAACGTCGGAGTGATC........................................................................................................................................................................................................................................................27200.6012000000000012
............................................TCAACGACGGCGTGTTCAGGATTTG................................................................................................................................................................................................................................................................................................................................25200.501004000000006
...........................................TTCAACGACGGCGTGTTCAGGATT..................................................................................................................................................................................................................................................................................................................................24200.5010010000000000
...................................................................................................................................................................................................................................................................................................................TT------------------------------------------------------GTAATTTGACGGAATTACCATCGT..2650.40201010000000
.......................................................................................................................................................................................................................................................................................................T--------CAATT------------------------------------------------------GTAATTTGACGGAATTACCAT.....2750.40200200000000
..........................................................................................................T-ATTGTTGACGGATAATTCAACGTC.................................................................................................................................................................................................................................................................25200.35700100000006
..................................................................................................................................................TT--------------------TTTGATCCCAAGCTTTTTGATTG......................................................................................................................................................................................................2590.33303000000000
...........TATG------AAT-TTTTTCTTTGTCGGAAAA..........................................................................................................................................................................................................................................................................................................................................................25200.30606000000000
........................................................................................................................TAATTCAACGTCGGAGTGATCAGGAT...................................................................................................................................................................................................................................................26200.30606000000000
........................................................................................................................TAATTCAACGTCGGAGTGATCAGGATT..................................................................................................................................................................................................................................................27200.25541000000000
......TAGATTATG------AAT-TTTTTCTTTGTCGG..............................................................................................................................................................................................................................................................................................................................................................26200.25500000000005
...............................TTTGTCGGAAAATTCAACGACGGCGT............................................................................................................................................................................................................................................................................................................................................26200.25500000000005
..............................CTTTGTCGGAAAATTCAACGACGGCGTG...........................................................................................................................................................................................................................................................................................................................................28200.25500000000005
....................................................................................................................................GGAGTGATCAGGATTT--------------------TTTGATCCC....................................................................................................................................................................................................................25130.23301110000000
..................................................................................................................................................TT--------------------TTTGATCCCAAGCTTTTTGATTGT.....................................................................................................................................................................................................2690.22201100000000
..................................................................................................................................TCGGAGTGATCAGGATTT--------------------TTTGATC......................................................................................................................................................................................................................25200.20404000000000
.......................................................................................................................................................................................................................................................................................................T--------CAATT------------------------------------------------------GTAATTTGACGGAATTACCAC.....2750.20100100000000
....................................................................................................................................................................................................................................................................................................................T------------------------------------------------------GTAATTTGACGGAATTACCATCGT..2550.20101000000000
...................................................................................................................................................................................................................................................................................................................TT------------------------------------------------------GTAATTTGACGGAATTACCATCG...2550.20101000000000
.................................................................................................................TGACGGATAATTCAACGTCGGAGTGAT.........................................................................................................................................................................................................................................................27200.20400000000004
............................................................................................................................................................................................................................................................................................................................................................................TAATTTGACGGAATTACCATCGTCG2550.20101000000000
............................................................................................................................................................................................TTGTAAT------TTGACGGAATTA------A-----------------------------------CATCGT................................................................................................................................26200.20403000010000
......................................................................................................................................................................................................................................................................................................TT--------CAATT------------------------------------------------------GTAATTTGACGGAATTACCAT.....2850.20100100000000
............................................TCAACGACGGCGTGTTCAGGATTTGTGGA............................................................................................................................................................................................................................................................................................................................29200.20400000000004
................................................................................................................TTGACGGATAATTCAACGTCGGAGT............................................................................................................................................................................................................................................................25200.20400000000004
.............TG------AAT-TTTTTCTTTGTCGGAAAATT........................................................................................................................................................................................................................................................................................................................................................25200.20403100000000
............................................................................................................................................................................................................................................................................................................................................................................TAATTTGACGGAATTACCATCGTC.2450.20100100000000
.....................................................................................................................................................................................................................................................................................................TTT--------CAATT------------------------------------------------------GTAATTTGACGGAATTACCAT.....2950.20100100000000
....................................................................................................................................................................................................................................................................................................................T------------------------------------------------------GTAATTTGACGGAATTACC.......2060.17100100000000
.........................................................................................................................AATTCAACGTCGGAGTGATCAGGA....................................................................................................................................................................................................................................................24200.15303000000000
.............................TCTTTGTCGGAAAATTCAACGACGG...............................................................................................................................................................................................................................................................................................................................................25200.15300000000003
..................................................................................................................................................................................................T------TTGACGGAATTA------A-----------------------------------CATCGTCGGCTTG.........................................................................................................................27200.15303000000000
....................................CGGAAAATTCAACGACGGCGTGTTCAGGAT...................................................................................................................................................................................................................................................................................................................................30200.15300000000003
..................................................................TTGTGGATCCCAAAC---TATTAGT-------------TTT-AT.......................................................................................................................................................................................................................................................................................27200.15303000000000
...................................TCGGAAAATTCAACGACGGCGTGTTCAGGAT...................................................................................................................................................................................................................................................................................................................................31200.15300000000003
....................................................................................................................................GGAGTGATCAGGATTT--------------------TTTGATCC.....................................................................................................................................................................................................................24200.15300300000000
.........................................AATTCAACGACGGCGTGTTCAGGATT..................................................................................................................................................................................................................................................................................................................................26200.10202000000000
............................................TCAACGACGGCGTGTTCAGGATT..................................................................................................................................................................................................................................................................................................................................23200.10202000000000
.............................TCTTTGTCGGAAAATTCAACGACGGC..............................................................................................................................................................................................................................................................................................................................................26200.10200100000010
.................................................................TTTGTGGATCCCAAAC---TATTAGT-------------T............................................................................................................................................................................................................................................................................................24200.10200200000000
..............................................AACGACGGCGTGTTCAGGATTTGTGG.............................................................................................................................................................................................................................................................................................................................26200.10201000000001
.....................................................................TGGATCCCAAAC---TATTAGT-------------TTT-ATTGT....................................................................................................................................................................................................................................................................................27200.10202000000000
.........................................................................................................................AATTCAACGTCGGAGTGATCAGGAT...................................................................................................................................................................................................................................................25200.10202000000000
........................................................TGTTCAGGATTTGTGT.............................................................................................................................................................................................................................................................................................................................16200.10200000000002
.........................................................................TCCCAAAC---TATTAGT-------------TTT-ATTGTTGACG...............................................................................................................................................................................................................................................................................28200.10202000000000
..........................TTTTCTTTGTCGGAAAATTCAACGACGG...............................................................................................................................................................................................................................................................................................................................................28200.10200000000002
...............................................................................................................................................................................................TAAT------TTGACGGAATTA------A-----------------------------------CATCGTC...............................................................................................................................24200.10201100000000
...........................................TTCAACGACGGCGTGTTCAGGATTTG................................................................................................................................................................................................................................................................................................................................26200.10200000020000
.................................................................TTTGTGGATCCCAAAC---TATTAGT-------------TT...........................................................................................................................................................................................................................................................................................25200.10202000000000
........................................................................................................................................................................TTTGATCCCAAGCTTTTTGATTGTC....................................................................................................................................................................................................25100.10100100000000
...................................TCGGAAAATTCAACGACGGCGTGTTCA.......................................................................................................................................................................................................................................................................................................................................27200.10202000000000
...............................................................GATTTGTGGATCCCAAAC---TATTAGT-------------T............................................................................................................................................................................................................................................................................................26200.10201100000000
...................................................................................................................................................T--------------------TTTGATCCCAAGCTTTTTGATTGTC....................................................................................................................................................................................................26100.10100100000000
..................................................................................................................................................................................................T------TTGACGGAATTA------A-----------------------------------CATCGTCGGCT...........................................................................................................................25200.10201100000000
.............................................CAACGACGGCGTGTTCAGGAT...................................................................................................................................................................................................................................................................................................................................21200.10200000000002
.............................................CAACGACGGCGTGTTCAGGATTT.................................................................................................................................................................................................................................................................................................................................23200.10200000000002
..................................................................................................................................TCGGAGTGATCAGGATTT--------------------TTTGATCCCA...................................................................................................................................................................................................................28130.08101000000000
....................................................................................................................................GGAGTGATCAGGATTT--------------------TTTGATCCCAAG.................................................................................................................................................................................................................28130.08100100000000
........................................................................................................................................TGATCAGGATTT--------------------TTTGATCCCAAGC................................................................................................................................................................................................................25140.07100100000000
..................................................................................................................................................................................................T------TTGACGGAATTA------A-----------------------------------CATCGTCGGC............................................................................................................................24200.05101000000000
........................................................................................................................TAATTCAACGTCGGAGTGATCAGGAC...................................................................................................................................................................................................................................................26200.05100100000000
......................................GAAAATTCAACGACGGCGTGTTCAGG.....................................................................................................................................................................................................................................................................................................................................26200.05101000000000
.................................................GACGGCGTGTTCAGGATTTGTGG.............................................................................................................................................................................................................................................................................................................................23200.05101000000000
...................................TCGGAAAATTCAACGACGGCG.............................................................................................................................................................................................................................................................................................................................................21200.05101000000000
............................................................................................................................................................................................................................................................................................TCCCAAACTTTT--------CAATT------------------------------------------------------GTAATTTG..................25200.05101000000000
.................................TGTCGGAAAATTCAACGACGGCGTGTT.........................................................................................................................................................................................................................................................................................................................................27200.05101000000000
...................................................................TGTGGATCCCAAAC---TATTAGT-------------TTT-AT.......................................................................................................................................................................................................................................................................................26200.05101000000000
...........................................TTCAACGACGGCGTGTTCAGGATTTGT...............................................................................................................................................................................................................................................................................................................................27200.05101000000000
.........................................................................TCCCAAAC---TATTAGT-------------TTT-ATTGTT...................................................................................................................................................................................................................................................................................24200.05101000000000
..........................................................................................................................................................................................................TGACGGAATTA------A-----------------------------------CATCGTCGGCTTG.........................................................................................................................25200.05101000000000
.........................................................................................................TT-ATTGTTGACGGATAATTCAACGT..................................................................................................................................................................................................................................................................25200.05101000000000
............................................TCAACGACGGCGTGTTCAGGA....................................................................................................................................................................................................................................................................................................................................21200.05100000010000
................................................CGACGGCGTGTTCAGGATTTGTGGA............................................................................................................................................................................................................................................................................................................................25200.05101000000000
.....................................................GCGTGTTCAGGATTTGTGGATCCCAAAC---.................................................................................................................................................................................................................................................................................................................28200.05100100000000
...................................................................TGTGGATCCCAAAC---TATTAGT-------------T............................................................................................................................................................................................................................................................................................22200.05100100000000
..............................................AACGACGGCGTGTTCAGGATTTGTGGAT...........................................................................................................................................................................................................................................................................................................................28200.05100000010000
.......................................................................................TAGT-------------TTT-ATTGTTGACGGATAATTC.......................................................................................................................................................................................................................................................................25200.05100100000000
....................................................................................................................................................................................................................................................................................................TTTT--------CAATT------------------------------------------------------GTAATTTGACGGAATT..........25200.05101000000000
..........................................................................................................T-ATTGTTGACGGATAATTCAACGTCG................................................................................................................................................................................................................................................................26200.05101000000000
..........................................................TTCAGGATTTGTGGATCCCAAAC---TA...............................................................................................................................................................................................................................................................................................................25200.05101000000000
........................................................................................................................TAATTCAACGTCGGAGTGA..........................................................................................................................................................................................................................................................19200.05100000100000
........................................................................................................................TAATTCAACGTCGGAGTGATCAGG.....................................................................................................................................................................................................................................................24200.05101000000000
.ATTATTAGATTATG------AAT-TTTTTCTT....................................................................................................................................................................................................................................................................................................................................................................25200.05101000000000
..........TTATG------AAT-TTTTTCTTTGTCGGAAAAT.........................................................................................................................................................................................................................................................................................................................................................27200.05101000000000
.......................T-TTTTTCTTTGTCGGAAAATTCAACGAC.................................................................................................................................................................................................................................................................................................................................................28200.05100100000000
..................................................ACGGCGTGTTCAGGATTTGTGGATCCCA.......................................................................................................................................................................................................................................................................................................................28200.05101000000000
..............................................................GGATTTGTGGATCCCAAAC---TATTAGT-------------T............................................................................................................................................................................................................................................................................................27200.05101000000000
.......................................................................................................................ATAATTCAACGTCGGAGTGATCAGG.....................................................................................................................................................................................................................................................25200.05101000000000
...................................TCGGAAAATTCAACGACGGCGT............................................................................................................................................................................................................................................................................................................................................22200.05100100000000
....................................................................GTGGATCCCAAAC---TATTAGT-------------T............................................................................................................................................................................................................................................................................................21200.05101000000000
...............................TTTGTCGGAAAATTCAACGACGGCG.............................................................................................................................................................................................................................................................................................................................................25200.05101000000000
....................................................................................TATTAGT-------------TTT-ATTGTTGACGGATAATTC.......................................................................................................................................................................................................................................................................28200.05101000000000
............................................................................................................................TCAACGTCGGAGTGATCAGGATT..................................................................................................................................................................................................................................................23200.05101000000000
......................................GAAAATTCAACGACGGCGTGTTCAGGA....................................................................................................................................................................................................................................................................................................................................27200.05100000000001
......................................................................................................................................................................................................................................................................................TT-TGATCCCAAACTTTT--------CAATT------------------------------------------------------GTAATT....................28200.05101000000000
............................................................................................................................................................................................TTGTAAT------TTGACGGAATTA------A-----------------------------------CATC..................................................................................................................................24200.05101000000000
...................................TCGGAAAATTCAACGACGGCGTGTTC........................................................................................................................................................................................................................................................................................................................................26200.05100100000000
........................................AAATTCAACGACGGCGTGTTCAGGATT..................................................................................................................................................................................................................................................................................................................................27200.05100100000000
..........................TTTTCTTTGTCGGAAAATTCAACGAC.................................................................................................................................................................................................................................................................................................................................................26200.05101000000000
..........................................................................................................................ATTCAACGTCGGAGTGATCAGGATT..................................................................................................................................................................................................................................................25200.05100100000000
.........................TTTTTCTTTGTCGGAAAATTCAACGACGG...............................................................................................................................................................................................................................................................................................................................................29200.05100000000001
..................................GTCGGAAAATTCAACGACGGCGTGTT.........................................................................................................................................................................................................................................................................................................................................26200.05100100000000
.............................TCTTTGTCGGAAAATTCAACG...................................................................................................................................................................................................................................................................................................................................................21200.05101000000000
................................TTGTCGGAAAATTCAACGACGGCGT............................................................................................................................................................................................................................................................................................................................................25200.05100000000001
..........................................................TTCAGGATTTGTGGATCCCAAAC---TATT.............................................................................................................................................................................................................................................................................................................27200.05101000000000
TATTATTAGATTATG------AAT-TTTTTCTT....................................................................................................................................................................................................................................................................................................................................................................26200.05101000000000
...................................................................................................................ACGGATAATTCAACGTCGGAGTGATC........................................................................................................................................................................................................................................................26200.05100000010000
........................................................................................................................TAATTCAACGTCGGAGTGATCAGGG....................................................................................................................................................................................................................................................25200.05110000000000
...........TATG------AAT-TTTTTCTTTGTCGGAAAATT........................................................................................................................................................................................................................................................................................................................................................27200.05101000000000
.........................................................................TCCCAAAC---TATTAGT-------------TTT-ATTGTTGAC................................................................................................................................................................................................................................................................................27200.05101000000000
............................................................................................................................TCAACGTCGGAGTGATCAGGATTT--------------------TT...........................................................................................................................................................................................................................26200.05100100000000
....................................................................................................................................GGAGTGATCAGGATTT--------------------TTTGATC......................................................................................................................................................................................................................23200.05100100000000
.......................................................................................TAGT-------------TTT-ATTGTTGACGGATAATT........................................................................................................................................................................................................................................................................24200.05101000000000
.............................................................................................................................................................................................TGTAAT------TTGACGGAATTA------A-----------------------------------CATCGTCGG.............................................................................................................................28200.05101000000000
......................................................................................TTAGT-------------TTT-ATTGTTGACGGATAATT........................................................................................................................................................................................................................................................................25200.05101000000000
...TATTAGATTATG------AAT-TTTTTCTTTGTCG...............................................................................................................................................................................................................................................................................................................................................................28200.05101000000000
............................TTCTTTGTCGGAAAATTCAACGAC.................................................................................................................................................................................................................................................................................................................................................24200.05101000000000
...........................................................................................................................TTCAACGTCGGAGTGATCAGGATTT--------------------TTT..........................................................................................................................................................................................................................28200.05101000000000
droEre2
TAATCCGAAACTAGT------GTA-GTTTTGATTAGCGGAAGGAACATCGCTGGCGTTCTCGGGATTATTGAATCCCAAGT---TGGATAC----------ACTATT-ATCGGTGGCGGATATTTCTACACCAGTATGCTCAGGATAA--------------------CTCGATCCCGAGCTATCTATACTATCCTCTATAATAATTGATTCTGTTGTAA-----------------------------------GTGCTTCCTGTTTCTCGTAATATTT-TTTTA-------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................................................................................................................................................................................................TAATTGATTCTGTTGTAA-----------------------------------GTGCTTCC..............................................................................................................................2671.0070000106
...........................................................................................................................................TCAGGATAA--------------------CTCGATCCCGAGCTATC............................................................................................................................................................................................................2640.2511000000
......................................................................................................................................TATGCTCAGGATAA--------------------CTCGATCCCGAGC................................................................................................................................................................................................................2750.2011000000
..........................TTTTGATTAGCGGAAGGAACATCGC..................................................................................................................................................................................................................................................................................................................................................2550.2011000000
..........................................GAACATCGCTGGCGTTCTCGGG.....................................................................................................................................................................................................................................................................................................................................2260.1710000100
.....................................................................................................................................................................................................................GTTGTAA-----------------------------------GTGCTTCCTGTT..........................................................................................................................1970.1411000000
.............................................CATCGCTGGCGTTCTCGGG.....................................................................................................................................................................................................................................................................................................................................1970.1410001000

Generated: 06/08/2015 at 05:16 PM