ID:

dpe_2127

 Coordinate:

scaffold_8694:859-1097 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-21.7 -21.5

Flybase annnotation

CDS [Dper\GL10068-cds]; exon [dper_GLEANR_10088:1]; exon [dper_GLEANR_10088:2]; CDS [Dper\GL10068-cds]; intron [Dper\GL10068-in]

No Repeatable elements found

mature
  1. scaffold_55:16436-16460 +
  2. scaffold_177:34477-34501 +
  3. scaffold_0:696735-696759 +
  4. scaffold_0:9728394-9728418 +
  5. scaffold_2:1307993-1308017 +
  6. scaffold_2:1751213-1751237 +
  7. scaffold_6:2688851-2688875 +
  8. scaffold_4:7034193-7034217 +
  9. scaffold_7:1768801-1768825 +
  10. scaffold_8:321437-321461 +
  11. scaffold_9:2886221-2886245 +
  12. scaffold_13:286980-287004 +
  13. scaffold_61:103232-103256 +
  14. scaffold_56:218612-218636 +
  15. scaffold_122:28398-28422 +
  16. scaffold_122:33135-33159 +
  17. scaffold_146:7489-7513 +
  18. scaffold_199:12084-12108 +
  19. scaffold_2366:841-865 +
  20. scaffold_6059:815-839 +
  21. scaffold_21:189738-189762 +
  22. scaffold_157:35495-35519 +
  23. scaffold_2:268670-268694 +
  24. scaffold_6:4737306-4737330 +
  25. scaffold_78:49876-49900 +
  26. scaffold_17:1401982-1402006 +
  27. scaffold_16:139943-139967 +
  28. scaffold_66:272599-272623 +
  29. scaffold_10933:437-461 +
  30. scaffold_211:31438-31462 +
  31. scaffold_113:96003-96027 +
  32. scaffold_531:46816-46840 +
  33. scaffold_449:8886-8910 +
  34. scaffold_3618:2204-2228 +
  35. scaffold_1125:4474-4498 +
  36. scaffold_2406:3148-3172 +
  37. scaffold_5613:1161-1185 +
  38. scaffold_8690:1042-1066 +
  39. dpe_2127  scaffold_8694:872-896 +
  40. scaffold_583:4258-4282 +
  41. scaffold_13:1844088-1844112 +
  42. scaffold_26:185487-185511 +
star
  1. scaffold_8:823199-823218 -
  2. scaffold_8:828364-828383 -
  3. scaffold_10933:517-536 +
  4. dpe_2127  scaffold_8694:952-971 +
  5. scaffold_7977:1038-1057 -

Sense Strand Reads

---------------###################################-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GCTCTCTCTCTCATGATGACGTCACTCTGGGGTACGGATAGCGCAAGTCGGTGTGTGACACTTTCGTTGTATGAACTGGCACATCTATATACTGTATGGTTAGTGCTTGAGTACTTTGGCAAATGAAATACTTTGTGTTGCAAAACGGAGTAGGGAAACTGCTGAAACTGCTATACAGCAACTACAGCTGGTTGAAGAATTAAGGGGAAAATCCCCATCCAAAAAACATTTACAGAGGTGTTTTATATTACAAATATTCATGCATTTATTTTAAATTTCGTTCGCGTAGTCGTGAGCGATCCTCGCATTACAATAGACATTCCGGCGGCAGTCAGAACA
***************************************************************.....((((.....(((((..((((((...))))))...)))))...))))...((((.......((((((((........)))))))).......))))******************************************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V111
male body		 V057
head
 V042
embryo
 V050
head
...............................................................TCGTTGTATGAACTGGCACATCTAT........................................................................................................................................................................................................................................................... 25 0 20 3.45 69 69 0 0 0 0 0
...............................................................TCGTTGTATGAACTGGCACATCT............................................................................................................................................................................................................................................................. 23 0 20 3.05 61 61 0 0 0 0 0
................................................................CGTTGTATGAACTGGCACATCTATA.......................................................................................................................................................................................................................................................... 25 0 20 1.90 38 37 1 0 0 0 0
..........TCATGATGACGTCACTCTGGGG................................................................................................................................................................................................................................................................................................................... 22 0 20 1.05 21 21 0 0 0 0 0
.....................TCACTCTGGGGTACGGATAGCGCAAG.................................................................................................................................................................................................................................................................................................... 26 0 20 0.90 18 17 0 0 0 1 0
................................................................CGTTGTATGAACTGGCACATCTAT........................................................................................................................................................................................................................................................... 24 0 20 0.80 16 16 0 0 0 0 0
......TCTCTCATGATGACGTCACTCTGGGG................................................................................................................................................................................................................................................................................................................... 26 0 20 0.80 16 16 0 0 0 0 0
.....................TCACTCTGGGGTACGGATAGCGC....................................................................................................................................................................................................................................................................................................... 23 0 20 0.60 12 11 0 0 0 1 0
............................................................CTTTCGTTGTATGAACTGGCAC................................................................................................................................................................................................................................................................. 22 0 20 0.50 10 0 10 0 0 0 0
.....................TCACTCTGGGGTACGGATAGCG........................................................................................................................................................................................................................................................................................................ 22 0 20 0.50 10 10 0 0 0 0 0
...............................................................TCGTTGTATGAACTGGCACATC.............................................................................................................................................................................................................................................................. 22 0 20 0.45 9 9 0 0 0 0 0
....TCTCTCTCATGATGACGTCACTC........................................................................................................................................................................................................................................................................................................................ 23 0 20 0.45 9 9 0 0 0 0 0
...............................................................TCGTTGTAGGAACTGGCACATCTA............................................................................................................................................................................................................................................................ 24 1 20 0.35 7 7 0 0 0 0 0
..........TCATGATGACGTCACTCTGG..................................................................................................................................................................................................................................................................................................................... 20 0 20 0.35 7 5 0 2 0 0 0
...............................................................TCGTTGTATGAACTGGCAC................................................................................................................................................................................................................................................................. 19 0 20 0.35 7 0 7 0 0 0 0
...............................................................TCGTTGTATGAACTGGCACATCTATAT......................................................................................................................................................................................................................................................... 27 0 20 0.30 6 6 0 0 0 0 0
..........TCATGATGACGTCACTCTGGGGTAC................................................................................................................................................................................................................................................................................................................ 25 0 20 0.30 6 6 0 0 0 0 0
.....................TCACTCTGGGGTACGGATAGC......................................................................................................................................................................................................................................................................................................... 21 0 20 0.25 5 5 0 0 0 0 0
..........TCATGATGACGTCACTCTGGGGTACG............................................................................................................................................................................................................................................................................................................... 26 0 20 0.20 4 4 0 0 0 0 0
...........CATGATGACGTCACTCTGGGG................................................................................................................................................................................................................................................................................................................... 21 0 20 0.20 4 4 0 0 0 0 0
...............................................................TCGTTGTACGAACTGGCACATCTATA.......................................................................................................................................................................................................................................................... 26 1 20 0.20 4 4 0 0 0 0 0
.......................................................................................................................................TGTTGCAAAGCGGAGTGGGG........................................................................................................................................................................................ 20 2 5 0.20 1 0 0 1 0 0 0
...............................................................................................................................................AACGGAGTAGGGAAACTGCT................................................................................................................................................................................ 20 0 5 0.20 1 0 1 0 0 0 0
....................................................................................CTATATACTGTATGGTTAGTGCTT....................................................................................................................................................................................................................................... 24 0 11 0.18 2 2 0 0 0 0 0
......................CACTCTGGGGTACGGATAGCGCAAG.................................................................................................................................................................................................................................................................................................... 25 0 20 0.15 3 3 0 0 0 0 0
........TCTCATGATGACGTCACTC........................................................................................................................................................................................................................................................................................................................ 19 0 20 0.15 3 0 3 0 0 0 0
....................................................................................CTATATACTGTATGGTTAGT........................................................................................................................................................................................................................................... 20 0 20 0.15 3 3 0 0 0 0 0
....TCTCTCTCATGATGACGTCACTCTGGGG................................................................................................................................................................................................................................................................................................................... 28 0 20 0.15 3 3 0 0 0 0 0
.....................................................TGTGACACTTTCGTTGTATGAACTG..................................................................................................................................................................................................................................................................... 25 0 20 0.15 3 3 0 0 0 0 0
............ATGATGACGTCACTCTGGGG................................................................................................................................................................................................................................................................................................................... 20 0 20 0.15 3 2 0 1 0 0 0
......TCTCTCATGATGACGTCACTCTG...................................................................................................................................................................................................................................................................................................................... 23 0 20 0.15 3 3 0 0 0 0 0
....................................................................................................................TGGCAACTGTAATACTTTGT........................................................................................................................................................................................................... 20 2 7 0.14 1 0 0 0 1 0 0
....................................................................................................................TGGCAACTGTAATACTTTGTCT......................................................................................................................................................................................................... 22 3 7 0.14 1 0 0 0 1 0 0
.....................TCACTCTGGGGTACGGATGGCGC....................................................................................................................................................................................................................................................................................................... 23 1 20 0.10 2 0 2 0 0 0 0
..................................................................TTGTATGAACTGGCACATCTATATAC....................................................................................................................................................................................................................................................... 26 0 20 0.10 2 2 0 0 0 0 0
..........TCATGATGACGTCACTCTGGGGTACGG.............................................................................................................................................................................................................................................................................................................. 27 0 20 0.10 2 2 0 0 0 0 0
.........................................................ACACTTTCGTTGTATGAACTGG.................................................................................................................................................................................................................................................................... 22 0 20 0.10 2 2 0 0 0 0 0
..TCTCTCTCTCATGATGACGTCAC.......................................................................................................................................................................................................................................................................................................................... 23 0 20 0.10 2 2 0 0 0 0 0
.....CTCTCTCATGATGACGTCACTCTG...................................................................................................................................................................................................................................................................................................................... 24 0 20 0.10 2 2 0 0 0 0 0
.............TGATGACGTCACTCTGGGGTACGG.............................................................................................................................................................................................................................................................................................................. 24 0 20 0.10 2 2 0 0 0 0 0
..............................................................TTCGTTGTATGAACTGGCACA................................................................................................................................................................................................................................................................ 21 0 20 0.10 2 0 0 2 0 0 0
.............................................................TTTCGTTGTATGAACTGGCACATCTA............................................................................................................................................................................................................................................................ 26 0 20 0.10 2 0 2 0 0 0 0
....................GTCACTCTGGGGTACGGATAGCGCA...................................................................................................................................................................................................................................................................................................... 25 0 20 0.10 2 2 0 0 0 0 0
................................................CGGTGTGTGACACTTTCGTTGTATGAAC....................................................................................................................................................................................................................................................................... 28 0 20 0.10 2 0 2 0 0 0 0
.........CTCATGATGACGTCACTCTGGG.................................................................................................................................................................................................................................................................................................................... 22 0 20 0.10 2 2 0 0 0 0 0
.........................................................ACACTTTCGTTGTATGAACTG..................................................................................................................................................................................................................................................................... 21 0 20 0.10 2 2 0 0 0 0 0
....................................................................................CTATATACTGTATGGTTAGTG.......................................................................................................................................................................................................................................... 21 0 20 0.10 2 2 0 0 0 0 0
.......CTCTCATGATGACGTCACT......................................................................................................................................................................................................................................................................................................................... 19 0 20 0.10 2 0 2 0 0 0 0
.............TGATGACGTCACTCTGGGGT.................................................................................................................................................................................................................................................................................................................. 20 0 20 0.10 2 0 2 0 0 0 0
..................................................................TTGTATGAACTGGCACATC.............................................................................................................................................................................................................................................................. 19 0 20 0.10 2 2 0 0 0 0 0
.............................................................................................................................................AACACGGAGCAGGGAAACTGG................................................................................................................................................................................. 21 3 11 0.09 1 0 0 0 1 0 0
......................................................................................ATATACTGTATGGTTAGCGCT........................................................................................................................................................................................................................................ 21 1 20 0.05 1 0 0 0 0 0 1
.....................TCACTCTGAGGTACGGATAGCGCAA..................................................................................................................................................................................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0
.......................ACTCTGGGGTACGGATAG.......................................................................................................................................................................................................................................................................................................... 18 0 20 0.05 1 1 0 0 0 0 0
.....................TCACTCTGGGGTGCGGATAGCGCAAG.................................................................................................................................................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0
...........................TGGGGTACGGATAGCGCAAGT................................................................................................................................................................................................................................................................................................... 21 0 20 0.05 1 0 0 1 0 0 0
.......................ACTCTGGGGTACGGATAGGG........................................................................................................................................................................................................................................................................................................ 20 1 20 0.05 1 1 0 0 0 0 0
.................GACGTCACTCTGGGGTACGGATA........................................................................................................................................................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0
.....................TCACTCTGTGGTACGGATAG.......................................................................................................................................................................................................................................................................................................... 20 1 20 0.05 1 1 0 0 0 0 0
.....................TCACTCTGGGGTTCGGATAGCGC....................................................................................................................................................................................................................................................................................................... 23 1 20 0.05 1 0 0 0 0 1 0
...............................................................TCGTTGTATGAACTGGCACATGTA............................................................................................................................................................................................................................................................ 24 1 20 0.05 1 1 0 0 0 0 0
..............................................................TTCGTTGTATGAACTGGCACATCTATA.......................................................................................................................................................................................................................................................... 27 0 20 0.05 1 0 1 0 0 0 0
...................TTTCACTCTGGGGTACGGATAGCGCAAG.................................................................................................................................................................................................................................................................................................... 28 2 20 0.05 1 1 0 0 0 0 0
..............................................................TTCGTTGTATGAACTGGCACATCTAT........................................................................................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0
....................................GATGGCGCAAGTCGGTGTGTG.......................................................................................................................................................................................................................................................................................... 21 1 20 0.05 1 0 0 1 0 0 0
...............................................................TCGTTGTATGAACTTGCACATCT............................................................................................................................................................................................................................................................. 23 1 20 0.05 1 1 0 0 0 0 0
.....................TCACTCTGGGGTGCGGATAGCGCAA..................................................................................................................................................................................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0
........................CTCTGGGGTACGGATAGCGCA...................................................................................................................................................................................................................................................................................................... 21 0 20 0.05 1 0 0 1 0 0 0
......................................................................ATGAACTGGCACATCTATATACTG..................................................................................................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0
...................................................TGTGTGACACTTTCGTTGTATGT......................................................................................................................................................................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0
.............................................................TTTCGTTGTATGAACTGGC................................................................................................................................................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0
............ATGATGACGTCACTCTGG..................................................................................................................................................................................................................................................................................................................... 18 0 20 0.05 1 1 0 0 0 0 0
..................................................GTGTGTGACACTTTCGTTGTA............................................................................................................................................................................................................................................................................ 21 0 20 0.05 1 0 0 0 1 0 0
..............................................................GTCGTTGTATGAACTGGCACATCTATA.......................................................................................................................................................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0 0
.....................TCACTCTGGGGCACGGATAGCGC....................................................................................................................................................................................................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0
...............................................................TCGATGTATGAACTGGCACATCTATATA........................................................................................................................................................................................................................................................ 28 1 20 0.05 1 0 1 0 0 0 0
.............TGATGACGTCACTCTGGGGTACGGAA............................................................................................................................................................................................................................................................................................................ 26 1 20 0.05 1 1 0 0 0 0 0
...............ATGACGTCACTCTGGGGTACGG.............................................................................................................................................................................................................................................................................................................. 22 0 20 0.05 1 1 0 0 0 0 0
..........TCATGATGACGTCACTCTGGGGC.................................................................................................................................................................................................................................................................................................................. 23 1 20 0.05 1 0 1 0 0 0 0
...............................................................TCGTTGTATGAACTGGCACA................................................................................................................................................................................................................................................................ 20 0 20 0.05 1 1 0 0 0 0 0
......................................................................................ATATACTGTATGGTTAGTGC......................................................................................................................................................................................................................................... 20 0 20 0.05 1 0 0 0 0 1 0
................................................CGGTGTGTGACACTTTCGTTGTATT.......................................................................................................................................................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0
....................................................................................CTATATACTGTATGGTTAGTGC......................................................................................................................................................................................................................................... 22 0 20 0.05 1 0 0 0 0 1 0
..............................................................TTCGTTGTATGAACTGGCACATCT............................................................................................................................................................................................................................................................. 24 0 20 0.05 1 1 0 0 0 0 0
..............GATGACGTCACTCTGGGGTA................................................................................................................................................................................................................................................................................................................. 20 0 20 0.05 1 0 0 1 0 0 0
.............TGATGGCGTCACTCTGGG.................................................................................................................................................................................................................................................................................................................... 18 1 20 0.05 1 0 0 0 1 0 0
..........TCATGATGACGTCACTCTGGGGTACA............................................................................................................................................................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0
.................GACGTCACTCTGGGGTACGG.............................................................................................................................................................................................................................................................................................................. 20 0 20 0.05 1 0 0 1 0 0 0
......................................................................ATGAACTGGCACATCTATATACTGTA................................................................................................................................................................................................................................................... 26 0 20 0.05 1 0 1 0 0 0 0
.............TGATGACGCCACTCTGGGGTACGGA............................................................................................................................................................................................................................................................................................................. 25 1 20 0.05 1 1 0 0 0 0 0
.......................................................TGACACTTTCGTTGTATGAAC....................................................................................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0
.............................................................TTTCGTTGTATGAACTGGCACATCTATA.......................................................................................................................................................................................................................................................... 28 0 20 0.05 1 1 0 0 0 0 0
.....................................................TGTGACACTTTCGTTGTATGAACTGGC................................................................................................................................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0
...............................GTACGGATGGCGCCGGTCGG................................................................................................................................................................................................................................................................................................ 20 3 20 0.05 1 0 0 0 1 0 0
.......................ACTCTGGGGTGCGGATGGCGC....................................................................................................................................................................................................................................................................................................... 21 2 20 0.05 1 0 0 0 1 0 0
..............GATGACGTCACTCTGGGGTACG............................................................................................................................................................................................................................................................................................................... 22 0 20 0.05 1 0 0 1 0 0 0
...............ATGACGTCACTCTGGGGTAC................................................................................................................................................................................................................................................................................................................ 20 0 20 0.05 1 0 1 0 0 0 0
.............TGATGACGTCACTCTGGG.................................................................................................................................................................................................................................................................................................................... 18 0 20 0.05 1 1 0 0 0 0 0
......................................................................ATGAACTGGCACATCTAT........................................................................................................................................................................................................................................................... 18 0 20 0.05 1 1 0 0 0 0 0
..........TCATGATGACGTCACTCTGGG.................................................................................................................................................................................................................................................................................................................... 21 0 20 0.05 1 0 0 1 0 0 0
..........................................................CACTTTCGTTGTATGAACTGG.................................................................................................................................................................................................................................................................... 21 0 20 0.05 1 0 0 1 0 0 0
...............................................................CCGTTGTATGAACTGGCACATCTATA.......................................................................................................................................................................................................................................................... 26 1 20 0.05 1 0 1 0 0 0 0
....................................................GTGTGACACTTTCGTTGTATGAACTGG.................................................................................................................................................................................................................................................................... 27 0 20 0.05 1 0 0 0 0 1 0
.....CTCTCTCATGATGACGTCACT......................................................................................................................................................................................................................................................................................................................... 21 0 20 0.05 1 0 1 0 0 0 0
.....................TCACTCTGGGGTACGGATAGCTT....................................................................................................................................................................................................................................................................................................... 23 2 20 0.05 1 1 0 0 0 0 0
........................CTCTGGGGTACGGATGGCGC....................................................................................................................................................................................................................................................................................................... 20 1 20 0.05 1 0 0 0 1 0 0
.................................................GGTGTGTGACACTTTCGTTG.............................................................................................................................................................................................................................................................................. 20 0 20 0.05 1 1 0 0 0 0 0
................TGACGTCACTCTGGGGTACA............................................................................................................................................................................................................................................................................................................... 20 1 20 0.05 1 0 0 0 0 1 0
.............TGATGACGTCACTCTGGGGTAC................................................................................................................................................................................................................................................................................................................ 22 0 20 0.05 1 1 0 0 0 0 0
................TGACGTCACTCTGGGGTACGT.............................................................................................................................................................................................................................................................................................................. 21 1 20 0.05 1 0 0 1 0 0 0
.............................................................TTTCGTTGTATGAACTGGCA.................................................................................................................................................................................................................................................................. 20 0 20 0.05 1 0 0 1 0 0 0
........TCTCATGATGACGTCACTCT....................................................................................................................................................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0
......................CACTCTGGGGTACGGATAGCGCA...................................................................................................................................................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0
.........................................................ACACTTTCGTTGTATGAACTGGCAC................................................................................................................................................................................................................................................................. 25 0 20 0.05 1 1 0 0 0 0 0
............................................................CTTTCGTTTTATGAACTGGCAC................................................................................................................................................................................................................................................................. 22 1 20 0.05 1 1 0 0 0 0 0
.......................................................TGACACTTTCGTTGTATGAACTGGCAC................................................................................................................................................................................................................................................................. 27 0 20 0.05 1 0 1 0 0 0 0
...................................................TGTGTGACACTTTCGTTGTATGAACTGG.................................................................................................................................................................................................................................................................... 28 0 20 0.05 1 1 0 0 0 0 0
..TCTCTCTCTCATGATGACGTCACTC........................................................................................................................................................................................................................................................................................................................ 25 0 20 0.05 1 1 0 0 0 0 0
..........TCATGATGACGTCACTCTG...................................................................................................................................................................................................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0
..........TCATGATGGCGTCACTCTGGGG................................................................................................................................................................................................................................................................................................................... 22 1 20 0.05 1 1 0 0 0 0 0
....................................................................GTATGAACTGGCACATCTATATACTG..................................................................................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0
........TCTCATGACGACGTCACTCTGGGG................................................................................................................................................................................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0
.......................................................TGACACTTTCGTTGTATGAA........................................................................................................................................................................................................................................................................ 20 0 20 0.05 1 1 0 0 0 0 0
...............................................................GCGTTGTATGAACTGGCACATCTATA.......................................................................................................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0
.................GACGTCACTCTGGGGTACG............................................................................................................................................................................................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0
...........CATGATGACGTCACTCTGG..................................................................................................................................................................................................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0
...................................................TGTGTGACACTTTCGTTGTATGAACT...................................................................................................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0
..TCTCTCTCTCATGATGACGTC............................................................................................................................................................................................................................................................................................................................ 21 0 20 0.05 1 0 0 0 1 0 0
......................................................................................ATATACTGTATGGTTAGTGCT........................................................................................................................................................................................................................................ 21 0 20 0.05 1 0 0 1 0 0 0
....TCTCTCTCATGATGACGTCACTCTGGG.................................................................................................................................................................................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0
....................................................................GTATGAACTGGCACATCTATA.......................................................................................................................................................................................................................................................... 21 0 20 0.05 1 0 1 0 0 0 0
...................................................TGTGTGACACTTTCGTTGTATGAAC....................................................................................................................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0
..............................................................TTCGTTGTATGAACTGGCACATC.............................................................................................................................................................................................................................................................. 23 0 20 0.05 1 1 0 0 0 0 0
...............................................................TCGTTGTATGAACTGTCACATCTATA.......................................................................................................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0
........................................................................................ATACTGTATGGTTAGTGCTT....................................................................................................................................................................................................................................... 20 0 20 0.05 1 0 0 1 0 0 0

Anti-sense strand reads

CGAGAGAGAGAGTACTACTGCAGTGAGACCCCATGCCTATCGCGTTCAGCCACACACTGTGAAAGCAACATACTTGACCGTGTAGATATATGACATACCAATCACGAACTCATGAAACCGTTTACTTTATGAAACACAACGTTTTGCCTCATCCCTTTGACGACTTTGACGATATGTCGTTGATGTCGACCAACTTCTTAATTCCCCTTTTAGGGGTAGGTTTTTTGTAAATGTCTCCACAAAATATAATGTTTATAAGTACGTAAATAAAATTTAAAGCAAGCGCATCAGCACTCGCTAGGAGCGTAATGTTATCTGTAAGGCCGCCGTCAGTCTTGT
********************************************************************************************************************************************************************************.....((((.....(((((..((((((...))))))...)))))...))))...((((.......((((((((........)))))))).......))))*************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V042
embryo
 V111
male body		 M021
embryo
 V057
head
 V050
head
................................................GCCACACACTGTGAAAGCAACATAC.......................................................................................................................................................................................................................................................................... 25 0 20 0.95 19 19 0 0 0 0 0
.............................................TCAGCCACACACTGTGAAAGCAACATAC.......................................................................................................................................................................................................................................................................... 28 0 20 0.35 7 7 0 0 0 0 0
...............................................AGCCACACACTGTGAAAGCAACATAC.......................................................................................................................................................................................................................................................................... 26 0 20 0.35 7 7 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................TCAGCACTCGCTAGGAGCGTAATG............................ 24 0 4 0.25 1 0 0 0 1 0 0
.................................................................................................................................................................................................................................................................................TTAAAGCAAGCGCATCAG................................................ 18 0 4 0.25 1 0 1 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................ATCTGTAAGGCCGCTGTCAGT..... 21 1 5 0.20 1 0 0 1 0 0 0
..............................................CAGCCACACACTGTGAAAGCAACATAC.......................................................................................................................................................................................................................................................................... 27 0 20 0.15 3 3 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................GCTAGGGGCGTAATGCTA......................... 18 2 7 0.14 1 0 0 1 0 0 0
...............TACTGCAGTGAGACCCCATGCCTAT........................................................................................................................................................................................................................................................................................................... 25 0 20 0.10 2 2 0 0 0 0 0
.........................................................................TTGACCGTGTAGATATATGAC..................................................................................................................................................................................................................................................... 21 0 20 0.10 2 2 0 0 0 0 0
.....GAGAGAGTACTACTGCAGTG.......................................................................................................................................................................................................................................................................................................................... 20 0 20 0.10 2 0 2 0 0 0 0
............................................................................................................................................................................................................................................................................................................................TGGAAGGCCGCGGCCAGTC.... 19 3 14 0.07 1 0 0 0 0 1 0
....AGAGGGAGTACTACTGCAGTGAGACC..................................................................................................................................................................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0
....AGAGAGAGTACTACTGCAGTGAGACC..................................................................................................................................................................................................................................................................................................................... 26 0 20 0.05 1 0 0 0 1 0 0
.....................................................ACACTGTGGGAGCAACGTACT......................................................................................................................................................................................................................................................................... 21 3 20 0.05 1 1 0 0 0 0 0
....................CAGTGAGACCCCGTGCCTATC.......................................................................................................................................................................................................................................................................................................... 21 1 20 0.05 1 1 0 0 0 0 0
.............................................TCAGCCACACACTGTGAAAGCAAC.............................................................................................................................................................................................................................................................................. 24 0 20 0.05 1 1 0 0 0 0 0
..............................................CAGCCACACACTGTGAAAGCAACATA........................................................................................................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0
..........................................................................TGACCGTGTAGATATATGACA.................................................................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0
.................................................CCACACACTGTGAAAGCAACATAC.......................................................................................................................................................................................................................................................................... 24 0 20 0.05 1 0 0 1 0 0 0
....................CGGTGAGACCCCGTGCCTGTC.......................................................................................................................................................................................................................................................................................................... 21 3 20 0.05 1 0 0 0 0 0 1
..................TGCAGAGAGACCCCATGCATG............................................................................................................................................................................................................................................................................................................ 21 3 20 0.05 1 0 0 0 0 1 0
.................CTGCAGTGAGACCCCATGCCT............................................................................................................................................................................................................................................................................................................. 21 0 20 0.05 1 0 0 0 1 0 0
...................GCAGTGAGACCCCATGCCTATCGCGT...................................................................................................................................................................................................................................................................................................... 26 0 20 0.05 1 0 1 0 0 0 0
......................................................CACTGTGGGAGCGACATACTT........................................................................................................................................................................................................................................................................ 21 3 20 0.05 1 1 0 0 0 0 0
..................................................CACACACTGTGAAAGCAACATAC.......................................................................................................................................................................................................................................................................... 23 0 20 0.05 1 0 1 0 0 0 0
............................................ATCAGCCACACACTGTGAAAGCAACATAC.......................................................................................................................................................................................................................................................................... 29 1 20 0.05 1 1 0 0 0 0 0
...............................................AACCACACACTGTGAAAGCAACATAC.......................................................................................................................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0
...............................................AGCCACAAACTGCGAAAGC................................................................................................................................................................................................................................................................................. 19 2 20 0.05 1 0 0 0 0 1 0
..........................................................................TGGCCGTGTAGATATATGACATACCAAT............................................................................................................................................................................................................................................. 28 1 20 0.05 1 1 0 0 0 0 0
.........................................................................TTGGCCGTGTAGGTATATGACATA.................................................................................................................................................................................................................................................. 24 2 20 0.05 1 1 0 0 0 0 0
...................GCAGTGAGACCACATGCCTA............................................................................................................................................................................................................................................................................................................ 20 1 20 0.05 1 1 0 0 0 0 0
..............................................................AAGCAACATACCTGACCGTG................................................................................................................................................................................................................................................................. 20 1 20 0.05 1 1 0 0 0 0 0
....................................CTATCGCGTTCAGCCACACACT......................................................................................................................................................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0
.......GGGAGTACTACTGCAGTGAGACCC.................................................................................................................................................................................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0
...................................................ACACACTGTGAAAGCAACATACTTGA...................................................................................................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0
..............CTACTGCGGTGAGACCCCGTG................................................................................................................................................................................................................................................................................................................ 21 2 20 0.05 1 0 0 0 0 1 0
........................................................................................................................................................................................................................................................................................................GCTAGGGGCGTAATGCTC......................... 18 3 20 0.05 1 1 0 0 0 0 0
CGAGAGAGAGAGTGCTGCTGC.............................................................................................................................................................................................................................................................................................................................. 21 2 20 0.05 1 1 0 0 0 0 0
........................AAGACCCCATGCCTATCGCGTT..................................................................................................................................................................................................................................................................................................... 22 1 20 0.05 1 1 0 0 0 0 0
.....................AGTGAGACCCCGTGCCTATC.......................................................................................................................................................................................................................................................................................................... 20 1 20 0.05 1 0 0 0 0 1 0
.............................................TCAGCCACACACTGTGAAAGCAACATA........................................................................................................................................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0
.............ACTACTGCAGCGAGACCCCAT................................................................................................................................................................................................................................................................................................................. 21 1 20 0.05 1 0 0 1 0 0 0
.............................................TCAGCCACACACTGTGGGAGCGACATAC.......................................................................................................................................................................................................................................................................... 28 3 20 0.05 1 1 0 0 0 0 0
..AGAGAGAGAGTACTACTGCAG............................................................................................................................................................................................................................................................................................................................ 21 0 20 0.05 1 1 0 0 0 0 0
...........................................................................GACCGTGTAGATATATGACATACCAATC............................................................................................................................................................................................................................................ 28 0 20 0.05 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_8694:809-1147 + dpe_2127 GCTCTCTCTCTCATGATGACGTCACTCTGGGGTACGGATAGCGCAAGTCGGTGTGTGACACTTTCGTTGTATGAACTGGCACATCTATATACTGTATGGTTAGTGCTTGAGTACTTTGGCAAATGAAATACTTTGTGTTGCAAAACGGAGTAGGGAAACTGCTGAAACTGCTATACAGCAACTACAGCTGGTTGAAGAATTAAGGGGAAAATCCCCATCCAAA-AAACATTTACAGAGGTGTTTTATATTACAAATATTCATGCATTTATTTTAAATTTCGTTCGCGTAGTCGTGAGCGATCCTCGCATTACAATAGACATTCCGGCGGCAGTCAGAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 4_group3:9628826-9629134 - TGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAATTAAGAGGAAAATCCCCATCCAAAAAAACATTTACAGAGGTGTTTTATATTACAAATATTCATGCATTTATTTTAAATTTCGTTCGCGTAGTCGTGAGCGATCCTCGCATTACAATAGACATTCCGGCGGCAGTCAGAACTAGGATCTCTACTGCGACCTGATTGACGGCGACTACCAAGAGGAGCGGAACTATTACTCACATTCTGAGCAGCTCTAGTCGTCGACTCACTAAATTTATTTTTCTCCTGCTTACGTTGGATAGCCGAGAGGGCTACCGC---TTCAGAGTTCGCTTCAGTTAACT
droVir3 scaffold_12963:7104077-7104137 + AAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCACGTTCGCGCAGTCGCGAACGCTCAATGCATCATC---GCAA---TGCTGGCAGCGACGATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000299512:9126-9226 + CAT----------------------------------------------------------TTTCGTTGTATGAAATGACCAGTCTATATGTTGTATGGTTAGTGCT--AGTACTCTGACGACGAAAATCCGCTGTAT---AAATTAATACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGGAATCGCTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000776759:35710-35770 + AAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCCGTTCCCGAAGTCGCGAGAGATCCTCGCATTATA---GACA---CGATCGCAGTACAGACC--------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302188:676276-676389 - CG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCCGCAGTCGGGAGAGGTCCACGCACTACA---GGCA---CGATCACAGTTCGGATCGCGATCTCTACCGTGACCTGATCAACGAGGATTACGAAGATCA-------------------------------------------------------------------------------------------------------GGGGAGCTATGGCTCA--
droTak1 scf7180000415264:180982-181121 - AAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCCGTTCTCGCAGTCGCGAGAGATCCTCGCACTACA---GACA---CGATCGCAGTCCAGATCGTGATCTTTATCGCGATCTGATCAACGATGATTACGAGGATCA-------------------------------------------------------------------------------------GGGCAGCTATAGCTCGAGGAATAACTTTGATCATCG
dm3 chr2L:1178145-1178205 + AAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCCGTTCGCGCAGTCGGGAGCGGTCCTCACACTATA---GAAA---CGACCGCAGTCCGGATC--------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 2l:1123347-1123441 - GCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGTGATCGTGGTCTCGATACTGTTCATCTTCTTCTGCTTGCGCTGGATGGCCGAGAGGGCAACCGCTGCTCCGGAATTGGCTTCCGTCAA--
droSec2 scaffold_14:1135922-1136016 - GCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGTGATCGTGGTCTCGATACTGTTCATCTTCTTCTGCTTGCGCTGGATGGCCGAGAGGGCAACCGCTGCTCCGGAGTTGGCTTCCGTCAA--
droYak3 2L:1158149-1158209 + AAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCCGTTCCCGCAGTCGGGAGCGCTCCTCCCACTACA---GACA---CGATCGCAGTCCGGATC--------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4929:1221386-1221480 - GCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGTGATTGTGGTCTCGATACTGTTCATCTTCTTCTGCTTGCGCTGGATGGCCGAGAGGGCAACCGCTGCTCCGGAATTGGCTTCAGTTAA--

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
GCTCTCTCTCTCATGATGACGTCACTCTGGGGTACGGATAGCGCAAGTCGGTGTGTGACACTTTCGTTGTATGAACTGGCACATCTATATACTGTATGGTTAGTGCTTGAGTACTTTGGCAAATGAAATACTTTGTGTTGCAAAACGGAGTAGGGAAACTGCTGAAACTGCTATACAGCAACTACAGCTGGTTGAAGAATTAAGGGGAAAATCCCCATCCAAA-AAACATTTACAGAGGTGTTTTATATTACAAATATTCATGCATTTATTTTAAATTTCGTTCGCGTAGTCGTGAGCGATCCTCGCATTACAATAGACATTCCGGCGGCAGTCAGAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................................................TCGTTGTATGAACTGGCACATCTAT................................................................................................................................................................................................................................................................................................................................................................................................................................25203.45690690000
...............................................................TCGTTGTATGAACTGGCACATCT..................................................................................................................................................................................................................................................................................................................................................................................................................................23203.05610610000
................................................................CGTTGTATGAACTGGCACATCTATA...............................................................................................................................................................................................................................................................................................................................................................................................................................25201.90381370000
..........TCATGATGACGTCACTCTGGGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22201.05210210000
.....................TCACTCTGGGGTACGGATAGCGCAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.90180171000
................................................................CGTTGTATGAACTGGCACATCTAT................................................................................................................................................................................................................................................................................................................................................................................................................................24200.80160160000
......TCTCTCATGATGACGTCACTCTGGGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.80160160000
.....................TCACTCTGGGGTACGGATAGCGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.60120111000
............................................................CTTTCGTTGTATGAACTGGCAC......................................................................................................................................................................................................................................................................................................................................................................................................................................22200.50101000000
.....................TCACTCTGGGGTACGGATAGCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.50100100000
...............................................................TCGTTGTATGAACTGGCACATC...................................................................................................................................................................................................................................................................................................................................................................................................................................22200.459090000
....TCTCTCTCATGATGACGTCACTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.459090000
..........TCATGATGACGTCACTCTGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.357050002
...............................................................TCGTTGTATGAACTGGCAC......................................................................................................................................................................................................................................................................................................................................................................................................................................19200.357700000
...............................................................TCGTTGTATGAACTGGCACATCTATAT..............................................................................................................................................................................................................................................................................................................................................................................................................................27200.306060000
..........TCATGATGACGTCACTCTGGGGTAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.306060000
.....................TCACTCTGGGGTACGGATAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.255050000
..........TCATGATGACGTCACTCTGGGGTACG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.204040000
...........CATGATGACGTCACTCTGGGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.204040000
...............................................................................................................................................AACGGAGTAGGGAAACTGCT.....................................................................................................................................................................................................................................................................................................................................................2050.201100000
....................................................................................CTATATACTGTATGGTTAGTGCTT............................................................................................................................................................................................................................................................................................................................................................................................................24110.182020000
......................CACTCTGGGGTACGGATAGCGCAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.153030000
........TCTCATGATGACGTCACTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.153300000
....................................................................................CTATATACTGTATGGTTAGT................................................................................................................................................................................................................................................................................................................................................................................................................20200.153030000
....TCTCTCTCATGATGACGTCACTCTGGGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.153030000
.....................................................TGTGACACTTTCGTTGTATGAACTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................25200.153030000
............ATGATGACGTCACTCTGGGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.153020001
......TCTCTCATGATGACGTCACTCTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.153030000
..................................................................TTGTATGAACTGGCACATCTATATAC............................................................................................................................................................................................................................................................................................................................................................................................................................26200.102020000
..........TCATGATGACGTCACTCTGGGGTACGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.102020000
.........................................................ACACTTTCGTTGTATGAACTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................22200.102020000
..TCTCTCTCTCATGATGACGTCAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.102020000
.....CTCTCTCATGATGACGTCACTCTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.102020000
.............TGATGACGTCACTCTGGGGTACGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.102020000
..............................................................TTCGTTGTATGAACTGGCACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102000002
.............................................................TTTCGTTGTATGAACTGGCACATCTA.................................................................................................................................................................................................................................................................................................................................................................................................................................26200.102200000
....................GTCACTCTGGGGTACGGATAGCGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.102020000
................................................CGGTGTGTGACACTTTCGTTGTATGAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................28200.102200000
.........CTCATGATGACGTCACTCTGGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.102020000
.........................................................ACACTTTCGTTGTATGAACTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102020000
....................................................................................CTATATACTGTATGGTTAGTG...............................................................................................................................................................................................................................................................................................................................................................................................................21200.102020000
.......CTCTCATGATGACGTCACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.102200000
.............TGATGACGTCACTCTGGGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.102200000
..................................................................TTGTATGAACTGGCACATC...................................................................................................................................................................................................................................................................................................................................................................................................................................19200.102020000
.......................ACTCTGGGGTACGGATAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051010000
...........................TGGGGTACGGATAGCGCAAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000001
.................GACGTCACTCTGGGGTACGGATA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051010000
..............................................................TTCGTTGTATGAACTGGCACATCTATA...............................................................................................................................................................................................................................................................................................................................................................................................................................27200.051100000
..............................................................TTCGTTGTATGAACTGGCACATCTAT................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051010000
........................CTCTGGGGTACGGATAGCGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000001
......................................................................ATGAACTGGCACATCTATATACTG..........................................................................................................................................................................................................................................................................................................................................................................................................................24200.051010000
...................................................TGTGTGACACTTTCGTTGTATGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051010000
.............................................................TTTCGTTGTATGAACTGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051010000
............ATGATGACGTCACTCTGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051010000
..................................................GTGTGTGACACTTTCGTTGTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000010
.............TGATGACGTCACTCTGGGGTACGGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051010000
...............ATGACGTCACTCTGGGGTACGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051010000
..........TCATGATGACGTCACTCTGGGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051100000
...............................................................TCGTTGTATGAACTGGCACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
......................................................................................ATATACTGTATGGTTAGTGC..............................................................................................................................................................................................................................................................................................................................................................................................................20200.051001000
................................................CGGTGTGTGACACTTTCGTTGTATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051010000
....................................................................................CTATATACTGTATGGTTAGTGC..............................................................................................................................................................................................................................................................................................................................................................................................................22200.051001000
..............................................................TTCGTTGTATGAACTGGCACATCT..................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051010000
..............GATGACGTCACTCTGGGGTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000001
..........TCATGATGACGTCACTCTGGGGTACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051010000
.................GACGTCACTCTGGGGTACGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000001
......................................................................ATGAACTGGCACATCTATATACTGTA........................................................................................................................................................................................................................................................................................................................................................................................................................26200.051100000
.......................................................TGACACTTTCGTTGTATGAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051010000
.............................................................TTTCGTTGTATGAACTGGCACATCTATA...............................................................................................................................................................................................................................................................................................................................................................................................................................28200.051010000
.....................................................TGTGACACTTTCGTTGTATGAACTGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051010000
..............GATGACGTCACTCTGGGGTACG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000001
...............ATGACGTCACTCTGGGGTAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051100000
.............TGATGACGTCACTCTGGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051010000
......................................................................ATGAACTGGCACATCTAT................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051010000
..........TCATGATGACGTCACTCTGGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000001
..........................................................CACTTTCGTTGTATGAACTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000001
....................................................GTGTGACACTTTCGTTGTATGAACTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051001000
.....CTCTCTCATGATGACGTCACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
.....................TCACTCTGGGGTACGGATAGCTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051010000
.................................................GGTGTGTGACACTTTCGTTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
................TGACGTCACTCTGGGGTACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051001000
.............TGATGACGTCACTCTGGGGTAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051010000
................TGACGTCACTCTGGGGTACGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000001
.............................................................TTTCGTTGTATGAACTGGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000001
........TCTCATGATGACGTCACTCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
......................CACTCTGGGGTACGGATAGCGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051010000
.........................................................ACACTTTCGTTGTATGAACTGGCAC......................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051010000
.......................................................TGACACTTTCGTTGTATGAACTGGCAC......................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051100000
...................................................TGTGTGACACTTTCGTTGTATGAACTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051010000
..TCTCTCTCTCATGATGACGTCACTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051010000
..........TCATGATGACGTCACTCTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051010000
....................................................................GTATGAACTGGCACATCTATATACTG..........................................................................................................................................................................................................................................................................................................................................................................................................................26200.051010000
.......................................................TGACACTTTCGTTGTATGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
.................GACGTCACTCTGGGGTACG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051010000
...........CATGATGACGTCACTCTGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051010000
...................................................TGTGTGACACTTTCGTTGTATGAACT...........................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051010000
..TCTCTCTCTCATGATGACGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000010
......................................................................................ATATACTGTATGGTTAGTGCT.............................................................................................................................................................................................................................................................................................................................................................................................................21200.051000001
....TCTCTCTCATGATGACGTCACTCTGGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051010000
....................................................................GTATGAACTGGCACATCTATA...............................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
...................................................TGTGTGACACTTTCGTTGTATGAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051010000
..............................................................TTCGTTGTATGAACTGGCACATC...................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051010000
........................................................................................ATACTGTATGGTTAGTGCTT............................................................................................................................................................................................................................................................................................................................................................................................................20200.051000001
dp5
TGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAATTAAGAGGAAAATCCCCATCCAAAAAAACATTTACAGAGGTGTTTTATATTACAAATATTCATGCATTTATTTTAAATTTCGTTCGCGTAGTCGTGAGCGATCCTCGCATTACAATAGACATTCCGGCGGCAGTCAGAACTAGGATCTCTACTGCGACCTGATTGACGGCGACTACCAAGAGGAGCGGAACTATTACTCACATTCTGAGCAGCTCTAGTCGTCGACTCACTAAATTTATTTTTCTCCTGCTTACGTTGGATAGCCGAGAGGGCTACCGC---TTCAGAGTTCGCTTCAGTTAACTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................................................................................................................................................................................................................................................................................................................CGGCAGTCAGAACTAGGATC..............................................................................................................................................................2013.0030000000030
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACGTTGGATAGCCGAGAGG..................................2112.0021100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................GAGCAGCTCTAGTCGTCGACT..............................................................................2111.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................ATTGACGGCGACTACCAAG.............................................................................................................................1911.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................GACGGCGACTACCAAGAGGA.........................................................................................................................2011.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGCTTACGTTGGATAGCCGA......................................2211.0010100000000
.......................................................................................................................................................................................................................................................................................................................................GGCAGTCAGAACTAGGATCT.............................................................................................................................................................2011.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................TCTACTGCGACCTGATTGACGG........................................................................................................................................2211.0010000000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................GAGCAGCTCTAGTCGTCGACTCACTA.........................................................................2611.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................ACTGCGACCTGATTGACGGCG......................................................................................................................................2111.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................GACGGCGACTACCAAGAGGAG........................................................................................................................2111.0010100000000
.............................................................................................................................................................................................................................................................................................................................................CAGAACTAGGATCTCTACTGC......................................................................................................................................................2111.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGTTGGATAGCCGAGAGG..................................2011.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTACGTTGGATAGCCGAGAG...................................2111.0010100000000
...............................................................................................................................................................................................................................................................................................................................................GAACTAGGATCTCTACTGCGA....................................................................................................................................................2111.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTCCTGCTTACGTTGGATA...........................................2111.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTCTAGTCGTCGACTCACT..........................................................................2211.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................CTACTGCGACCTGATTGACGG........................................................................................................................................2111.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................ACGGCGACTACCAAGAGGA.........................................................................................................................1911.0010100000000
.........................................................................................................................................................................................................................................................................................TTCGCGTAGTCGTGAGCGATC..........................................................................................................................................................................................................2111.0010100000000
......................................................................................................................................................................................................................................................................................................................................CGGCAGTCAGAACTAGGATCT.............................................................................................................................................................2111.0010000000010
............................................................................................................................................................................................................................................................................................................................................................................................................TCACATTCTGAGCAGCTCTAG.......................................................................................2111.0010100000000
..............................................................................................................................................................................................................................................................................................................................................AGAACTAGGATCTCTACTGCG.....................................................................................................................................................2111.0010100000000
............................................................................................................................................................................................................................................................................................................................................................TACTGCGACCTGATTGACGGC.......................................................................................................................................2111.0010000000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTGGATAGCCGAGAGGGC................................2011.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTTACGTTGGATAGCCGA......................................2111.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................ATCTCTACTGCGACCTGATTG............................................................................................................................................2111.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGTTGGATAGCCGAGAGGG.................................2111.0010000001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTTGGATAGCCGAGAG...................................1811.0010100000000
..........................................................................................................................................................................................................................................................................................................................TAGACATTCCGGCGGCAGTC..........................................................................................................................................................................2020.5010100000000
............................................................................................................................................................................................................................................................................................................................GACATTCCGGCGGCAGTCA.........................................................................................................................................................................1920.5010100000000
......................................................................................................................................................................................................................................................................................................................ACAATAGACATTCCGGCGGCA.............................................................................................................................................................................2120.5010100000000
...................................................................................................................................................................................................................................................................................................................................................................................CTACCAAGAGGAGCGGAACTA................................................................................................................2120.5010100000000
................................................................................................................................................................................................................................................................................................................................................................................CGACTACCAAGAGGAGCGGA....................................................................................................................2020.5010100000000
droVir3
AAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCACGTTCGCGCAGTCGCGAACGCTCAATGCATCATC---GCAA---TGCTGGCAGCGACGATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................................................................................................................................................................................................................................................TCAATGCATCATC---GCAA---TGCTGGCAGCGA.........................................................................................................................................................................2911.001000000000000000000000000001000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................ATCATC---GCAA---TGCTGGCAGCGAC........................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
droKik1
CAT----------------------------------------------------------TTTCGTTGTATGAAATGACCAGTCTATATGTTGTATGGTTAGTGCT--AGTACTCTGACGACGAAAATCCGCTGTAT---AAATTAATACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGGAATCGCTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
AAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCCGTTCCCGAAGTCGCGAGAGATCCTCGCATTATA---GACA---CGATCGCAGTACAGACC--------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
CG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCCGCAGTCGGGAGAGGTCCACGCACTACA---GGCA---CGATCACAGTTCGGATCGCGATCTCTACCGTGACCTGATCAACGAGGATTACGAAGATCA-------------------------------------------------------------------------------------------------------GGGGAGCTATGGCTCA--SizeHit CountTotal NormTotal
No Reads
droTak1
AAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCCGTTCTCGCAGTCGCGAGAGATCCTCGCACTACA---GACA---CGATCGCAGTCCAGATCGTGATCTTTATCGCGATCTGATCAACGATGATTACGAGGATCA-------------------------------------------------------------------------------------GGGCAGCTATAGCTCGAGGAATAACTTTGATCATCGSizeHit CountTotal NormTotal
No Reads
dm3
AAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCCGTTCGCGCAGTCGGGAGCGGTCCTCACACTATA---GAAA---CGACCGCAGTCCGGATC--------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................................................................................................................................................................................................................................................................................GTTCGCGCAGTCGGGAGCGGTCCTC.......................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCCGTTCGCGCAGTCGGGA................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................CCCGTTCGCGCAGTCGGGAGC..............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................GCGCAGTCGGGAGCGGTCCTCAC.....................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGTGATCGTGGTCTCGATACTGTTCATCTTCTTCTGCTTGCGCTGGATGGCCGAGAGGGCAACCGCTGCTCCGGAATTGGCTTCCGTCAA--SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
GCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGTGATCGTGGTCTCGATACTGTTCATCTTCTTCTGCTTGCGCTGGATGGCCGAGAGGGCAACCGCTGCTCCGGAGTTGGCTTCCGTCAA--SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
AAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCCGTTCCCGCAGTCGGGAGCGCTCCTCCCACTACA---GACA---CGATCGCAGTCCGGATC--------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................................................................................................................................................................................................................................................................................ACA---GACA---CGATCGCAGTCCGGATC--------------------------------------------------------------------------------------------------------------------------------------------------------------------2411.00100100000000
droEre2
GCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGTGATTGTGGTCTCGATACTGTTCATCTTCTTCTGCTTGCGCTGGATGGCCGAGAGGGCAACCGCTGCTCCGGAATTGGCTTCAGTTAA--SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGATGGCCGAGAGGGCAGT.............................2111.0010000100

Generated: 06/08/2015 at 05:16 PM