ID:

dpe_2088

 Coordinate:

scaffold_78:11622-11664 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

intron [Dper\GL16233-in]; CDS [Dper\GL16233-cds]; exon [dper_GLEANR_17870:2]; exon [dper_GLEANR_17870:1]; CDS [Dper\GL16233-cds]

Repeatable elements

NameClassFamilyStrand
Gypsy8-I_Dpse-intLTRGypsy+

Sense Strand Reads

##################################################-------------------------------------------##################################################
GGAGGCGCGGGCGGCGACAGGAGGGAAGGGCCACCAGGAAGGAGGAGCCCGTCCACGAGAGCGACGAGGCGCTGCCACCTCCGCCATTCCGAGTGGTACTGCCGCCGATGCAGTCCCGGGCCGACGAGGCGGGGGCCGAGGGG
**************************************************.....((.(((((..((((........)))))))...))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V111
male body		 V057
head
 V042
embryo
.......................................................................................................................GCCGACGAGGCGGGGGCCGAGG.. 22 0 1 4.00 4 3 1 0 0
.................................CCAGGAAGGAGGAGCCCG............................................................................................ 18 0 3 1.33 4 4 0 0 0
............................................................................................................TGCAGTCCCGGGCCGACGAGGCGGGA......... 26 1 1 1.00 1 1 0 0 0
...................................................................................................TGCCGCCGATGCAGTCCCGGG....................... 21 0 3 1.00 3 2 0 0 1
.......................................................................................................................GCCGACGAGGCGGGGGCCGA.... 20 0 1 1.00 1 1 0 0 0
.......................................................................................................................GCCGACGAGGCGGGGGCCGAGGG. 23 0 1 1.00 1 1 0 0 0
............................................................................................................TGCAGTCCCGGGCCGACGAGGCGG........... 24 0 1 1.00 1 1 0 0 0
......................................................................................TTCCGAGTGGTACTGCCGCCGATGCA............................... 26 0 2 0.50 1 1 0 0 0
........................................................................................CCGAGTGGTACTGCCGCCGATGT................................ 23 1 2 0.50 1 1 0 0 0
..................................................................................ACCATTCCGAGTGGTACTGCCGC...................................... 23 1 4 0.50 2 2 0 0 0
............................................................................................GTGGTACTGCCGCCGATGCAGT............................. 22 0 2 0.50 1 1 0 0 0
............................................................................................................TGCAGTCCCGGGCCGACGAGG.............. 21 0 2 0.50 1 1 0 0 0
............................................................................................................TGCAGTCCCGGGCCGACGAGGCG............ 23 0 2 0.50 1 1 0 0 0
...........................................................................................AGTGGTACTGCCGCCGATGC................................ 20 0 2 0.50 1 1 0 0 0
........................................................................................CCGAGTGGTACTGCCGCCGATG................................. 22 0 2 0.50 1 1 0 0 0
.............................................................................................TGGTACTGCCGCCGATGCA............................... 19 0 2 0.50 1 1 0 0 0
..................................................................................GCCATTCCGAGTGGTACTGCCGCCG.................................... 25 0 2 0.50 1 1 0 0 0
.........................AAGGGCAACCAGGAATGAGGGGC............................................................................................... 23 3 2 0.50 1 0 0 1 0
.......................................................................................................................GCCGACGAGGCGGGGTCCGAG... 21 1 3 0.33 1 1 0 0 0
...........................................................................................................ATGCAGTCCCGGGCCGACGAG............... 21 0 3 0.33 1 1 0 0 0
............................................................................................................TGCAGTCCCGGGCCGACGA................ 19 0 3 0.33 1 1 0 0 0
.....................................................................................................CCGCCGATGCAGTCCCGG........................ 18 0 5 0.20 1 1 0 0 0
.................................CCAGTAAGGAGGAGCCCGTCCA........................................................................................ 22 1 6 0.17 1 1 0 0 0
.................................CCAGTAAGGAGGAGCCCGT........................................................................................... 19 1 7 0.14 1 1 0 0 0
.......................GGAAGGGCCACCAGGAGT...................................................................................................... 18 2 8 0.13 1 1 0 0 0
...................................AGTAAGGAGGAGCCCGTT.......................................................................................... 18 2 9 0.11 1 1 0 0 0
.................................CCAGTAAGGAGGAGCCCGTTA......................................................................................... 21 3 9 0.11 1 1 0 0 0
GGAGGCGCGGGCGGCGAGGGC.......................................................................................................................... 21 3 18 0.06 1 0 0 1 0

Anti-sense strand reads

CCTCCGCGCCCGCCGCTGTCCTCCCTTCCCGGTGGTCCTTCCTCCTCGGGCAGGTGCTCTCGCTGCTCCGCGACGGTGGAGGCGGTAAGGCTCACCATGACGGCGGCTACGTCAGGGCCCGGCTGCTCCGCCCCCGGCTCCCC
**************************************************.....((.(((((..((((........)))))))...))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V042
embryo
 V111
male body		 V057
head
........................................................................................................GGCTACGTCAGGGCCCGGCTGCTCC.............. 25 0 2 38.00 76 76 0 0 0 0
...........................................................................................................TACGTCAGGGCCCGGCTGCTCC.............. 22 0 2 36.00 72 14 58 0 0 0
..........................................................................................................CTACGTCAGGGCCCGGCTGCTCC.............. 23 0 2 18.00 36 17 19 0 0 0
.........................................................................................................GCTACGTCAGGGCCCGGCTGCTCC.............. 24 0 2 16.00 32 27 5 0 0 0
...........................................................................................................AACGTCAGGGCCCGGCTGCTCC.............. 22 1 2 12.00 24 3 21 0 0 0
............................................................................................................ACGTCAGGGCCCGGCTGCTCC.............. 21 0 2 12.00 24 4 20 0 0 0
.......................................................................................................CGGCTACGTCAGGGCCCGGCTGCTCC.............. 26 0 2 9.50 19 18 0 0 1 0
.................GTCCTCCCTTCCCGGTGGTCCTTCCT.................................................................................................... 26 0 3 3.67 11 11 0 0 0 0
..............................................................................................................GTCAGGGCCCGGCTGCTCC.............. 19 0 2 3.50 7 5 1 1 0 0
......................................................................................................GCGGCTACGTCAGGGCCCGGCTGCTCC.............. 27 0 2 3.00 6 6 0 0 0 0
.............................................................................................................TGTCAGGGCCCGGCTGCTCC.............. 20 1 2 2.00 4 1 3 0 0 0
.............................................................................................................CGTCAGGGCCCGGCTGCTCC.............. 20 0 2 2.00 4 4 0 0 0 0
..........................................................................................................TTACGTCAGGGCCCGGCTGCTCC.............. 23 1 2 2.00 4 1 3 0 0 0
....................................................................................GTAAGGCTCACCATGACGGCGGCT................................... 24 0 2 1.50 3 3 0 0 0 0
..........................................................................................................CTACCTCAGGGCCCGGCTGCTCC.............. 23 1 2 1.50 3 0 3 0 0 0
...........................................................................................................CACGTCAGGGCCCGGCTGCTCC.............. 22 1 2 1.50 3 0 3 0 0 0
..........................................................................................................AATCGTCAGGGCCCGGCTGCTCC.............. 23 3 2 1.50 3 0 3 0 0 0
............................................................................................................TCGTCAGGGCCCGGCTGCTCC.............. 21 1 2 1.00 2 2 0 0 0 0
....................CTCCCTTCCCGGTGGTCCTTCCT.................................................................................................... 23 0 3 1.00 3 3 0 0 0 0
.........................................................................................................GCTACTTCAGGGCCCGGCTGCTCC.............. 24 1 2 1.00 2 0 2 0 0 0
........................................................................................................GGCTACGTCAGGGCCCGGCTGCTC............... 24 0 3 1.00 3 3 0 0 0 0
........................................................................................................GACTACGTCAGGGCCCGGCTGCTCC.............. 25 1 3 1.00 3 3 0 0 0 0
......................................................................................................................CCGGCTGCTCCGCCCCCGGCTC... 22 0 1 1.00 1 0 1 0 0 0
...............................................................................................................TCAGGGCCCGGCTGCTCC.............. 18 0 2 1.00 2 0 2 0 0 0
.........................................................................CGGTGGAGTCGGTAAGGC.................................................... 18 1 1 1.00 1 1 0 0 0 0
...................CCTCCCTTCCCGGTGGTCCTTCCT.................................................................................................... 24 0 3 1.00 3 3 0 0 0 0
...................................................................................................ACGGCGGCTACGTCAGGGCCCGGC.................... 24 0 3 1.00 3 3 0 0 0 0
................TGTCCTCCCTTCCCGGTGGTCCTTCCT.................................................................................................... 27 0 3 1.00 3 3 0 0 0 0
.....................................................................................................................TTCGGCTGCTCCGCCCCCGGCTCCC. 25 2 1 1.00 1 1 0 0 0 0
..........................................................................................................AAACGTCAGGGCCCGGCTGCTCC.............. 23 2 2 1.00 2 1 1 0 0 0
..............................................................................................................GTCAGGGCCCGGCTGCTCCGCCC.......... 23 0 1 1.00 1 1 0 0 0 0
.................................................................................GCGGTAAGGCTCACCATGACG......................................... 21 0 3 0.67 2 2 0 0 0 0
.....................................................................................................................CCCGGCTGCTCCGCCCCTGGCTCCC. 25 1 3 0.67 2 1 1 0 0 0
.........................................................................................................GCTACGTCAGGGCCCGGCTGCTC............... 23 0 3 0.67 2 2 0 0 0 0
................................................................................GGCGGTAAGGCTCACCATGACGG........................................ 23 0 3 0.67 2 2 0 0 0 0
...........................................................................................................TACGTCAGGGCCCGGCTGCTC............... 21 0 3 0.67 2 2 0 0 0 0
............................................................................................................ACGTCAGGGCCCGGCTGCTC............... 20 0 3 0.67 2 2 0 0 0 0
.......................................................................................................CGGCTACGTCAGGGCCCGGCTGCTC............... 25 0 3 0.67 2 2 0 0 0 0
........................................................................................................GGCTACGTCAGGGCCGGGCTGCTC............... 24 1 5 0.60 3 3 0 0 0 0
........................................................................................................AGCTACGTCAGGGCCCGGCTGCTCC.............. 25 1 2 0.50 1 1 0 0 0 0
...........................................................................................................TACGTCCGGGCCCGGCTGCCCC.............. 22 2 2 0.50 1 1 0 0 0 0
..........................................................................................................CTACGTCAGGGCCCCGCTGCTCC.............. 23 1 2 0.50 1 1 0 0 0 0
.............................................................................................................AGTCAGGGCCCGGCTGCTCC.............. 20 1 2 0.50 1 0 1 0 0 0
.....................................................................................................TGCGGCTACGTCAGGGCCCGGCTGCTCC.............. 28 1 2 0.50 1 1 0 0 0 0
..........................................................................................................TAACGTCAGGGCCCGGCTGCTCC.............. 23 2 2 0.50 1 0 1 0 0 0
...............................................................................................................CCAGGGCCCGGCTGCTCCGC............ 20 1 2 0.50 1 0 1 0 0 0
.........................................................................................................GCTACGTCAGGGCCCCGCTGCTCC.............. 24 1 2 0.50 1 1 0 0 0 0
........................................................................................................GGCTACGTCATGGCCCGGCTGCTCC.............. 25 1 2 0.50 1 1 0 0 0 0
.......................................................................................................ATGCTACGTCAGGGCCCGGCTGCTCC.............. 26 2 2 0.50 1 0 1 0 0 0
..............................................................................................CCATGACGGCGGCTACGTCAGGGC......................... 24 0 2 0.50 1 1 0 0 0 0
..........................................................................................................CTACGTCAGGGCCCAGCTGCTCC.............. 23 1 2 0.50 1 1 0 0 0 0
.....................................................................................................TTCGGCTACGTCAGGGCCCGGCTGCTCC.............. 28 2 2 0.50 1 1 0 0 0 0
........................................................................................................TTTTACGTCAGGGCCCGGCTGCTCC.............. 25 3 2 0.50 1 1 0 0 0 0
...........................................................................................................TACGTCAGGGCCCGACTGCTCC.............. 22 1 2 0.50 1 0 1 0 0 0
...........GCCGCTGTCCTCCCTTCCCGGT.............................................................................................................. 22 0 6 0.50 3 3 0 0 0 0
............................................................................................................AAGTCAGGGCCCGGCTGCTCC.............. 21 1 2 0.50 1 1 0 0 0 0
........................................................................................................TGCTACGTCAGGGCCCGGCTGCTCC.............. 25 1 2 0.50 1 1 0 0 0 0
...............................................................................................................TCAGGGCCCGGCTGCTCCGC............ 20 0 2 0.50 1 0 1 0 0 0
...................................................................................GGTAAGGCTCACCATGACGGCGGCT................................... 25 0 2 0.50 1 1 0 0 0 0
.........................................................................................................GCTACGTCCGGGCCCGGCTGCCCC.............. 24 2 2 0.50 1 1 0 0 0 0
.......................................................................................AGGCTCACCATGACGGCGGCTACGT............................... 25 0 2 0.50 1 1 0 0 0 0
......................................................................................AAGGCTCACCATGACGGCGGCTACGT............................... 26 0 2 0.50 1 1 0 0 0 0
......................................................................................................GCGGCTACGTCAGGGCCCTGCTGCTCC.............. 27 1 2 0.50 1 1 0 0 0 0
............................................................................................................ACGTCAGGGCCCAGCTGCTCC.............. 21 1 2 0.50 1 1 0 0 0 0
...........................................................................................................TACGCCAGGGCCCGGCTGCTCC.............. 22 1 2 0.50 1 0 1 0 0 0
..........................................................................................................AAACGTCAGGCCCCGGCTGCTCC.............. 23 3 2 0.50 1 0 1 0 0 0
........................................................................................................GGCTACGTCAGGGCCCGGCTGCTCCG............. 26 0 2 0.50 1 1 0 0 0 0
.......................................................................................................GGCTTACGTCAGGGCCCGGCTGCTCC.............. 26 3 2 0.50 1 1 0 0 0 0
..........................................................................................................CTACGTCAGGGCCCGGCTCCTCC.............. 23 1 2 0.50 1 1 0 0 0 0
.....................................................................................................GGCGGCTACGTCAGGGCCCGGCTGCTCC.............. 28 0 2 0.50 1 1 0 0 0 0
...............................................................................................AATGACGGCGGCTACGTCAGGGC......................... 23 1 2 0.50 1 1 0 0 0 0
........................................................................................................GGCTACGTCAGGGCCCGGCTCCTCC.............. 25 1 2 0.50 1 1 0 0 0 0
.......................................................................................................CGGCTACGTCAGGGCCCGGCTGCTCCG............. 27 0 2 0.50 1 1 0 0 0 0
...........................................................................................................AACGTCAGGGCCCAGCTGCTCC.............. 22 2 2 0.50 1 1 0 0 0 0
..........................................................................................................CTACGTCAGGGCCGGGCTGCTCC.............. 23 1 5 0.40 2 0 2 0 0 0
.........................................................................................................GCTACGTCAGGGCCGGGCTGCTC............... 23 1 5 0.40 2 2 0 0 0 0
.......................................................................................................TGGCTACGTCAGGGCCCGGCTGCTC............... 25 1 3 0.33 1 1 0 0 0 0
................................................................................GGCGGTAAGGCTCACCATGAC.......................................... 21 0 3 0.33 1 1 0 0 0 0
..............................................................................................................ATCAGGGCCCGGCTGCTC............... 18 1 3 0.33 1 1 0 0 0 0
....................................................................................................CGGCGGCTACGTCAGGGCCCGGCT................... 24 0 3 0.33 1 1 0 0 0 0
.....................................................................................................................CCCGGCTGCTCCGCCCCT........ 18 1 3 0.33 1 0 1 0 0 0
.........................................................................................................ACTACGTCAGGGCCCGGCTGCTCC.............. 24 1 3 0.33 1 1 0 0 0 0
..............................................................................TCGGCGGTAAGGCTCACCATGAC.......................................... 23 2 3 0.33 1 1 0 0 0 0
..............................................................................TCGGCGGTAAGGCTCACCATGACGG........................................ 25 2 3 0.33 1 1 0 0 0 0
..............................................................................TCGGCGGTAAGGCTCACCATGACG......................................... 24 2 3 0.33 1 1 0 0 0 0
.........................TTCCCGGTGGTCCTTCCT.................................................................................................... 18 0 3 0.33 1 1 0 0 0 0
....................................................................................................GGGCGGCTACGTCAGGGCCCGGCT................... 24 1 3 0.33 1 0 1 0 0 0
.............................................................................................................CGTCAGGGCCCGGCTGCT................ 18 0 3 0.33 1 1 0 0 0 0
..........................................................................................................CTACGTCAGGGCCCGGCTGCT................ 21 0 3 0.33 1 1 0 0 0 0
...........................................................................................................TACGTCGGGGCCCGGCTGCTCC.............. 22 1 3 0.33 1 0 1 0 0 0
................................................................................GGCGGTAAGGCTCACCAT............................................. 18 0 3 0.33 1 1 0 0 0 0
......................CCCTTCCCGGTGGTCCTTCCT.................................................................................................... 21 0 3 0.33 1 1 0 0 0 0
.......................................................................................................CGACTACGTCAGGGCCCGGCTGCTCC.............. 26 1 3 0.33 1 1 0 0 0 0
.........................................................................................................GCTACGTCAGGGCCCGGCT................... 19 0 3 0.33 1 1 0 0 0 0
..................................................................................CGGTAAGGCTCACCATGACG......................................... 20 0 3 0.33 1 1 0 0 0 0
...............................................................................CGGCGGTAAGGCTCACCATGACGG........................................ 24 1 3 0.33 1 1 0 0 0 0
.................TTCCTCCCTTCCCGGTGGTCCTTCCT.................................................................................................... 26 1 3 0.33 1 1 0 0 0 0
...........................................................................................................ATAGTCAGGGCCCGGCTGCTCC.............. 22 3 3 0.33 1 1 0 0 0 0
........................................................................................GGCTCACCATGACGGGGGCTACGT............................... 24 1 3 0.33 1 1 0 0 0 0
...............................................................................AAGCGGTAAGGCTCACCACGACGG........................................ 24 2 4 0.25 1 1 0 0 0 0
......................AACTTCCCGGTGGTCCTTCCT.................................................................................................... 21 2 4 0.25 1 1 0 0 0 0
.................................................................................GTGGTAAGGCTCACCATGACGGCGGC.................................... 26 1 4 0.25 1 1 0 0 0 0
........................................................................................................GGCTACGTCAGGGCCAGGCTGCTC............... 24 1 5 0.20 1 1 0 0 0 0
.......................................................................................................CGGCTACGTCAGGGCCGGGCTGCTC............... 25 1 5 0.20 1 1 0 0 0 0
..............................................................................AAGGCGGTAAGGCTCACCACGACGGC....................................... 26 2 5 0.20 1 1 0 0 0 0
................................................................................GGTGGTAAGGCTCACCATGACG......................................... 22 1 5 0.20 1 1 0 0 0 0
...........GTCGCTGTCCTCCCTTCCCGGT.............................................................................................................. 22 1 6 0.17 1 1 0 0 0 0
...................................................................................................ACGGCGGCTACGTCAGGGC......................... 19 0 6 0.17 1 1 0 0 0 0
.............CGCTGTCCTCCCTTCCCGGT.............................................................................................................. 20 0 6 0.17 1 1 0 0 0 0
............CCGCTGTCCTCCCTTCCCGGT.............................................................................................................. 21 0 6 0.17 1 1 0 0 0 0
...............................................................................................................AAAGGGCCCGGCTGCTCC.............. 18 2 6 0.17 1 0 1 0 0 0
............................................................................................................ACGTCAGGGCCGGGCTGCTC............... 20 1 6 0.17 1 1 0 0 0 0
...............CTGTCCTCCCTTCCCGGTGGT........................................................................................................... 21 0 6 0.17 1 1 0 0 0 0
..................................................................TCCGCGACGGTGGACGCGATG........................................................ 21 3 6 0.17 1 0 0 0 0 1
.................GTCCTCCCTTCCCGGTGGTCGTTCCT.................................................................................................... 26 1 6 0.17 1 1 0 0 0 0
..............GCTGTCCTCCCTTCCCGGT.............................................................................................................. 19 0 6 0.17 1 1 0 0 0 0
..................................................................................................GACGGCGGCTACGTCAGGGC......................... 20 0 6 0.17 1 1 0 0 0 0
................................................................................AGTGGTAAGGCTCACCAT............................................. 18 2 7 0.14 1 1 0 0 0 0
.....................................................GTGCTCTCACTGCTCCGC........................................................................ 18 1 7 0.14 1 1 0 0 0 0
.....................................................GTGCTCTCGCTGCTCCGCG....................................................................... 19 0 7 0.14 1 1 0 0 0 0
.....................................................GTGCTCTCGCTGCTCCGC........................................................................ 18 0 7 0.14 1 1 0 0 0 0
....................................................GGTGCTCTCGCTGCTCCGC........................................................................ 19 0 7 0.14 1 1 0 0 0 0
....................................................AGTGCTCTCGCTGCTCCGC........................................................................ 19 1 7 0.14 1 1 0 0 0 0
.................................................................CTCGGCGACAGTGGGGGCGGT......................................................... 21 3 12 0.08 1 0 0 0 0 1
.........CCGCCGCGGTACTCCCTT.................................................................................................................... 18 2 12 0.08 1 1 0 0 0 0
.................................................................CTCGGCGACTGTGGGGGCGGT......................................................... 21 3 15 0.07 1 0 0 0 0 1
..............................................................................AAAGCGGTAAGGCTCACCAC............................................. 20 3 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_78:11572-11714 + dpe_2088 GGAGGCGCGGGCG-----------------GCGAC-----AGG-------AG-----------------------GGA---AGGGCCAC------------------CAG----------------------------------------------------------------------GAAGGAGGAGCC------------------CGT--------------------CCACGAGAGCGACG------------------------------------AGGCGCTGCCACCTCCGCCATTCC--------------GAGT------GGTA------CT-GC----------CG---------CCG--------------------------ATGCAGTCCCG--------------------------------------GG---CCGA---CGA---GGCGGGGGC----CGAGGG--------G
dp5 Unknown_group_549:190-331 + GGAGGCGCGGCGG-----------------CGA-C-----AGG-------AG-----------------------GGA---AGGGCCAC------------------CAG----------------------------------------------------------------------GAAGGAGGAGCC------------------CGG--------------------CCACGAGAGCGACG------------------------------------AGGCGCCGCCACCCCCGCCATTCC--------------GAGT------GGTA------CT-GC----------CG---------CCG--------------------------ATGCAGTCCCG--------------------------------------GG---CCGA---CGA---GGCGGGGAC----CGAGGG--------G
droWil2 scf2_1100000004943:7223000-7223143 - GCGGGTGCAGCAG-----------------GGG-C-----GAG------------------------------TATGAC---G------GCAG------T---------------------------------------------------------------------TGGGCCAGCAGGGGCGAGGGTGA------------------CAGCGGAGGGCCCGGCAGGGGCG----------GA------------------------------TGCAGCAG---------------CGGCGGGCC--------------CGGC------A------------GG----------TG---------CGG--AT--------GCAGCGG----------------------------------------------------------CGGCGGG---CCC---AGCAGGGGC----GGATGC--------A
droVir3 scaffold_12823:2378741-2378876 + GGCGGCGGCGGCG-----------------GCGGC-----GGA-------GGA------------------------G---GCGGCGGT------------------TAC----------------------------------GGT-GGCGGCGGTCATGTAAGCACCTTTGCTATCATCACCGAGAATCA------------------T----------------------------------------------------------------------------G-----------------------------------GC------GCCT------CG-GG----------TG---------GCG-GTC--------ATTACGG----------------------------------------------------------CGGCGGC---GGC---GGCGGCGGC----TATAGC--------G
droMoj3 scaffold_6496:6071050-6071196 - GGCGCCAGCGGCA-----------------GCAGC-----AGC-------GGC------------------------G---GCGGCGGT--------------------------------------------------------------------------------GTCAGCTCCATGGACGAGGACTC------------------CAT--------------------GCAGGCGCCCGATG------------------AGCCAGCAACGCCGCCAT---------------CGCCGCTGC--------------CAGC------AGT----------------------GG---------CA--GCA--------GCAGCAG----------------------------------------------------------CAGCAGC---AGC---GGCGGCGGC----GGCAGC--------G
droGri2 scaffold_14853:4549397-4549518 - GCAACAGCAGCAG-----------------CAG-C--AACAGG-------A-----------------------GCAACAGGA---------GCAGGAGCATGAGCA--ACT-----------------------------------------------------------------------GGAG--------------------------------------------------------GATG------------------------------------AGGA------------GCAATTGC--------------AGCT------GGAA------CT-GC----------GG---------GTG--------------------------GAGGACGAGCG--------------------------------------GG---CTGC---C-----GATGCGGAT----GATGAG--------G
droAna3 scaffold_13117:381583-381722 + GGACGCCGAGGAG-----------------GAGGA-----GGA-------GGA------------------------G---GAG---------------GCTGAGGA--CGA-----------------------------------------------------------------------GGAGGAGGACGACAACGCCTCGATGCAGTC--------------------GAACGCCGACG---------------------------------------ACATGGAGCTGG---A--------CG---------------------G-----------------CCCGCAGGAGGCGG----------TC--------GCCGGGA----------------------------------------------------------TGGCG-----------GCCGAG-GC---CGAGGCG--------G
droBip1 scf7180000396374:451439-451595 + GGAGCTCGACCAG-----------------GAC-C--AGGAGC-------A-----------------GGATCAA------GA---------GCCGGAGCCAGAGCA--GGA-----------------------------------------------------------------------GCAGGAGCCGGACAATG------------------------------GCA-----GCAGCGACC------------------------------------ACATCGAGCTATCCCCA-------TCGC--------------------------------------CCACTCTAACCGGTGACGATG--------AT--GTAA---------------GTCCTG-------------------------------------------CGCA---CAA---GGTGGAGGC----TCCGGG--------C
droKik1 scf7180000302698:416761-416897 + GGCACCGGCGGCG-----------------GAAGA-----AGC-------GGA------------------------A---GCAGCAAC------------------CAC----------------------------------------------------------------------GCGAGAGGTGTC------------------CAT--------------------G---GCGAGCATCA------------------AGACTGAGATGCCGCCAC---------------TGCACGC--------------------------GGCAGAGGCGCTCGCCG--------C-------------------------------------------------------------CAGCAG-----------------------TGCCACC---GAC---AGCGGCGGG----GGAACG--------G
droFic1 scf7180000454045:79213-79370 - GGTGGTGCTGGTG-----------------GAT-C--GACAGCAGGAGCAG------------------------------GA---------GCG----------------------------------------------------------------------------------------GCAGGAGCCCAGCAGTT----------GGT--------------------TCAACTGCCCGCCGGGAGCATTGTGAGCACCACCACCCACCGATTGT-----------------------------------------CGGTGCCCGTGACCGAGGC---------------------------------------------------------GGCTC--TCGTG--------------------------------------CAGCTGC---AGC---GTCGGCCCG----TTTACA--------T
droEle1 scf7180000490160:16244-16394 - GGAGGACGCGAGC-----------------GAGGA-----GGA-------GGA------------------------G---GGG----------------------------------------------------------------------------------------------------ACGGAGACCATCAGCCCCGAAGTGTCCTC--------------------GGACGAAGACGACG------------------------------------TGGCGCGGCGAGCTGCGAGGGACC--------------GGAT------GGTT------T--TCCG--------CC---------GGT--TGAGCAG--GGCAACGG---------------------------------------------------------------------------CTGGG-CT---CGGGAGGATCTGCCTA
droRho1 scf7180000768426:591-746 - GCAGCG-CAGCAG-----------------CAG---------------------------------CAGCATGAGCGAG---C------GCAG------CT-CGG--CGGCAGCAGCGGCGGCGGCGGCAGCAGCGGCGGTAGCGGCCGCCGG-------------------------------------------------------------------------------------------------------------------------------------------------CGGTAATGT--------------CAAT------GCGG------CC-GC----------CG---------TCG--CCCTCGG--GCTGACC----------------ACGCCCAGCGGCGG--------------------------------CG-----------AACGATCTC----CGAGCG--------T
droBia1 scf7180000298389:933790-933925 - GGAGGAGCAGCCG-----------------CCGGA-----GGA-GGA---GCA------------------------C---GAG---------CCGG-------------------------------------------------------------------------------------AGCAGGAGCC------------------CGG--------------------CGAGGAG---TA---------------------------------------------------CTCA-------TCGGGCGAGCTGCTCGCC------A------------------------------------GG--------CTGGGAGTCAGCCGCTCGGATCAGTC-----------------------------------------GG---CGGA---CCAGTCGCTGGA-CC---TGAGCGG--------C
droTak1 scf7180000415364:257965-258106 + GGGAGCGATGTCG-----------------GGCGC-----GGC-------CAG------------------------C---GGG---------------GCCTACGG--AGC-----------------------------------------------------------------------CCTGGGAGCGGGCAATG----------CCT--------------------CGGCCAGTCCGCTGG--------------------------------------------------GCGCC----------------------------------------------CCGCTCACACCGCC-------------------GCCATCG-------GCGCAGTCCTGCCTTTTG--GGCAGTCG---------------------------------------GGCCCCGGG----CGCCGA--------G
droEug1 scf7180000409522:255196-255340 - GAAAATACCGATGAGCGCAAGGAGCGGCTG------------------------TCAAAGCAGGCGGAGTATGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------CGAATGCGACGC-----------------------------------ATGCGCAGTCAT---A--------CG---------------------C-----------------CACGTAG---------------------------------------------------------------CAGCAGTGCCACAAGCACCGAGTTCCGGG---CCAAAACCGA---GGAGGAGGATGACGATGAG--------G
dm3 chrX:10360833-10360986 - GGCAGCGGTGGCG-----------------GCAGC-----GCA-------GG-----------------------CGC---AGCACCAC------------------CAG----------------------------------------------------------------------CAGCAACAGGCA------------------CAG--------------------GCGCACCACCAGCA------------------------------------CCATGC-ACTTTCCTCG-------CCGGGCCCGGTGCCCGGT------AGT------------------------------------------CAT--GGCCATGG-------CTACAGTCATGGATC----------------------------------GC---CGTT---CGA---CGCTGGATC----GTTGGA--------G
droSim2 3r:7016644-7016782 + GCAGCG-CAGCAG-----------------CAG---------------------------------CAGCATGAGCGAA---C------GCAG------CT-CGG--CGGCAGCAGCGGCGGCGGCGGCAGCAGCAGCGGTAGCGGCCGCCGG-------------------------------------------------------------------------------------------------------------------------------------------------CGGCAATGT--------------GAAT------GCGG------CT-GC----------CG---------TCG--------------------------CCCTGGGC----------------------------------------------CTGA---C-----CACGCCCAC----CGGCGG--------C
droSec2 scaffold_7:164855-164978 - GGCTCCGGCGGCG-----------------GTGGCTCCGAGCGAGGAGGAAGTGCAGGAGGC-------------------------------------------------------------------------------------------------------------------------GGCGGAG------------------------------------------------------------------------------------TGCCGCCAC---------------AGCAACTGC--------------GAGT------GCCC------CT-GC----------CG---------ATGAGCT--------ATCATGG----------------------------------------------------------CGGAGCT---GGT---GGTGGGAGC----AGCAGC--------A
droYak3 X:2547480-2547620 - GAGAATACGGACGAGCGCAAGGAGCGCCTG------------------------TCCAAGCAGGCGGAATATGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------CGAATGCGACGC-----------------------------------ATGCGCAGCCAC---A--------CG---------------------C-----------------CGCGCAG---------------------------------------------------------------CAGCAGCGCCACCAGCACCGAGTTCCGTG---CCAAAACCGA---GGAGGAAGA----TGAGGG--------C
droEre2 scaffold_4690:14246405-14246519 + GGCGGAGAAGGCG-----------------GCTGC-----GGA-------T----------------------------------------------------------------------------GCCGCCAAGGCGGCGGAAAGCGCTGC-------------------------------------------------------------------------------------------------------------------------------------------------CGAGAAGGC--------------GAGC------GCCG------CC-AC----------CA---------AGG--CTGTCGA--GGCGACGG----------------------------------------------------------CTGCCGG---CGA---GAAGGTGGC----CAAGGC--------G

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
GGAGGCGCGGGCG-----------------GCGAC-----AGG-------AG-----------------------GGA---AGGGCCAC------------------CAG----------------------------------------------------------------------GAAGGAGGAGCC------------------CGT--------------------CCACGAGAGCGACG------------------------------------AGGCGCTGCCACCTCCGCCATTCC--------------GAGT------GGTA------CT-GC----------CG---------CCG--------------------------ATGCAGTCCCG--------------------------------------GG---CCGA---CGA---GGCGGGGGC----CGAGGG--------GSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................G---CCGA---CGA---GGCGGGGGC----CGAGG..........2214.004030001
........................................................................................C------------------CAG----------------------------------------------------------------------GAAGGAGGAGCC------------------CG.......................................................................................................................................................................................................................................................................................1831.334040000
.............................................................................................................................................................................................................................................................................................................................................................................................................TGCAGTCCCG--------------------------------------GG---CCGA---CGA---GGCGGGA.....................2611.001010000
......................................................................................................................................................................................................................................................................................................................................................T-GC----------CG---------CCG--------------------------ATGCAGTCCCG--------------------------------------GG---.........................................2131.003021000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................G---CCGA---CGA---GGCGGGGGC----CGA............2011.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................G---CCGA---CGA---GGCGGGGGC----CGAGGG--------.2311.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................TGCAGTCCCG--------------------------------------GG---CCGA---CGA---GGCGG.......................2411.001010000
...............................................................................................................................................................................................................................................................................................................TTCC--------------GAGT------GGTA------CT-GC----------CG---------CCG--------------------------ATGCA..........................................................................................2620.501010000
.................................................................................................................................................................................................................................................................................................................CC--------------GAGT------GGTA------CT-GC----------CG---------CCG--------------------------ATGT...........................................................................................2320.501010000
...................................................................................................................................................................................................................................................................................................................................GT------GGTA------CT-GC----------CG---------CCG--------------------------ATGCAGT........................................................................................2220.501010000
.............................................................................................................................................................................................................................................................................................................................................................................................................TGCAGTCCCG--------------------------------------GG---CCGA---CGA---GG..........................2120.501010000
.............................................................................................................................................................................................................................................................................................................................................................................................................TGCAGTCCCG--------------------------------------GG---CCGA---CGA---GGCG........................2320.501010000
..................................................................................................................................................................................................................................................................................................................................AGT------GGTA------CT-GC----------CG---------CCG--------------------------ATGC...........................................................................................2020.501010000
.................................................................................................................................................................................................................................................................................................................CC--------------GAGT------GGTA------CT-GC----------CG---------CCG--------------------------ATG............................................................................................2220.501010000
....................................................................................................................................................................................................................................................................................................................................T------GGTA------CT-GC----------CG---------CCG--------------------------ATGCA..........................................................................................1920.501010000
...........................................................................................................................................................................................................................................................................................................GCCATTCC--------------GAGT------GGTA------CT-GC----------CG---------CCG--------------------------...............................................................................................2520.501010000
............................................................................................................................................................................................................................................................................................................................................................................................................ATGCAGTCCCG--------------------------------------GG---CCGA---CGA---G...........................2130.331010000
.............................................................................................................................................................................................................................................................................................................................................................................................................TGCAGTCCCG--------------------------------------GG---CCGA---CGA---............................1930.331010000
.........................................................................................................................................................................................................................................................................................................................................................C----------CG---------CCG--------------------------ATGCAGTCCCG--------------------------------------G.............................................1850.201010000
...........................................................................GGA---AGGGCCAC------------------CAG----------------------------------------------------------------------GAGT...................................................................................................................................................................................................................................................................................................................1880.131010000
dp5
GGAGGCGCGGCGG-----------------CGA-C-----AGG-------AG-----------------------GGA---AGGGCCAC------------------CAG----------------------------------------------------------------------GAAGGAGGAGCC------------------CGG--------------------CCACGAGAGCGACG------------------------------------AGGCGCCGCCACCCCCGCCATTCC--------------GAGT------GGTA------CT-GC----------CG---------CCG--------------------------ATGCAGTCCCG--------------------------------------GG---CCGA---CGA---GGCGGGGAC----CGAGGG--------GSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........GG-----------------CGA-C-----AGG-------AG-----------------------GGA---AGGGCCA...................................................................................................................................................................................................................................................................................................................................................................................................................2164.172502500000000
...........GG-----------------CGA-C-----AGG-------AG-----------------------GGA---AGGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................1964.172502220100000
...........GG-----------------CGA-C-----AGG-------AG-----------------------GGA---AGGG......................................................................................................................................................................................................................................................................................................................................................................................................................1863.502101800100200
...............................................................................................................................................................................................C------------------CGG--------------------CCACGAGAGCGACG------------------------------------AGG.............................................................................................................................................................................................................21183.175705410001100
...............................................................................................................................................................................................C------------------CGG--------------------CCACGAGAGCGACG------------------------------------AGGC............................................................................................................................................................................................................22182.724904600003000
...............................................................................................................................................................................................C------------------CGG--------------------CCACGAGAGCGACG------------------------------------AGGCG...........................................................................................................................................................................................................23182.394304210000000
...........GG-----------------CGA-C-----AGG-------AG-----------------------GGA---AGGGCCAC------------------................................................................................................................................................................................................................................................................................................................................................................................................2262.331401400000000
...........GG-----------------CGA-C-----AGG-------AG-----------------------GGA---AGGGCCAC------------------C...............................................................................................................................................................................................................................................................................................................................................................................................2361.671001000000000
...........GG-----------------CGA-C-----AGG-------AG-----------------------GGA---AGGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................2061.5090900000000
...............................................................................................................................................................................................C------------------CGG--------------------CCACGAGAGCGACG------------------------------------AGGCGC..........................................................................................................................................................................................................24181.061901600102000
...........GG-----------------CGA-C-----AGG-------AG-----------------------GGA---AGGGCCAC------------------CA..............................................................................................................................................................................................................................................................................................................................................................................................2460.8350400000100
..................................C-----AGG-------AG-----------------------GGA---AGGGCCAC------------------CAG----------------------------------------------------------------------G......................................................................................................................................................................................................................................................................................................................2140.7530300000000
.............................................................................................................................................................................................................................................................................................................................................................................................................TGCAGTCCCG--------------------------------------GG---CCGA---CGA---GG..........................2170.7150500000000
..................................................................................................................................................................................................................CGG--------------------CCACGAGAGCGACG------------------------------------AGGC............................................................................................................................................................................................................21180.671201110000000
...............................................................................................................................................................................................C------------------CGG--------------------CCACGAGAGCGACG------------------------------------AGGCGCC.........................................................................................................................................................................................................25180.561001000000000
....................................................................................................................................................................................................................G--------------------CCACGAGAGCGACG------------------------------------AGGCGCCG........................................................................................................................................................................................................23180.56100900000100
.............................................................................................................................................................................................................................................................................................................................................................................................................TGCAGTCCCG--------------------------------------GG---CCGA---CGA---GGCGGG......................2560.5030100000200
..................................................................................................................................................................................................................................................................................................................................AGT------GGTA------CT-GC----------CG---------CCG--------------------------ATGC...........................................................................................2070.4330210000000
.................................................................................................................................................................................................................................................................................................................CC--------------GAGT------GGTA------CT-GC----------CG---------CCG--------------------------ATGC...........................................................................................2370.4330300000000
.............................................................................................................................................................................................................................................................................................................................................TA------CT-GC----------CG---------CCG--------------------------ATGCAGTCCCG--------------------------------------GG---C........................................2550.4020200000000
...................................................................................................................................................................................................................GG--------------------CCACGAGAGCGACG------------------------------------AGGCGCCG........................................................................................................................................................................................................24180.3360600000000
...................................................................................................................................................................................................................GG--------------------CCACGAGAGCGACG------------------------------------AGGCGC..........................................................................................................................................................................................................22180.3360600000000
............G-----------------CGA-C-----AGG-------AG-----------------------GGA---AGGGCCAC------------------CA..............................................................................................................................................................................................................................................................................................................................................................................................2360.3320200000000
............G-----------------CGA-C-----AGG-------AG-----------------------GGA---AGGGCCAC------------------C...............................................................................................................................................................................................................................................................................................................................................................................................2260.3320200000000
..................................................................................................................................................................................................................CGG--------------------CCACGAGAGCGACG------------------------------------AGG.............................................................................................................................................................................................................20180.3360600000000
................................................................................................................................................................................................................................................................................................................TCC--------------GAGT------GGTA------CT-GC----------CG---------CCG--------------------------...............................................................................................2070.2920200000000
................................................................................................................................................................................................................................................................................................................TCC--------------GAGT------GGTA------CT-GC----------CG---------CCG--------------------------ATGCA..........................................................................................2570.2920200000000
.............................................................................................................................................................................................................................................................................................................................................................................................................TGCAGTCCCG--------------------------------------GG---CCGA---CGA---GGCG........................2370.2920200000000
.............................................................................................................................................................................................................................................................................................................................................................................................................TGCAGTCCCG--------------------------------------GG---CCGA---CGA---GGCGGTT.....................2670.2920000000200
....................................................................................................................................................................................................................G--------------------CCACGAGAGCGACG------------------------------------AGGCGC..........................................................................................................................................................................................................21180.2850500000000
..............................................................................................................................................................................................CC------------------CGG--------------------CCACGAGAGCGACG------------------------------------AGG.............................................................................................................................................................................................................22180.2850500000000
..................................C-----AGG-------AG-----------------------GGA---AGGGCCAC------------------CAG----------------------------------------------------------------------GT.....................................................................................................................................................................................................................................................................................................................2240.2510100000000
...........GG-----------------CGA-C-----AGG-------AG-----------------------GGA---AGGA......................................................................................................................................................................................................................................................................................................................................................................................................................1880.2520200000000
...........GG-----------------CGA-C-----AGG-------AG-----------------------GGA---AGGGCCAC------------------CAG----------------------------------------------------------------------G......................................................................................................................................................................................................................................................................................................................2640.2510100000000
..................................C-----AGG-------AG-----------------------GGA---AGGGCCAC------------------CAG----------------------------------------------------------------------GA.....................................................................................................................................................................................................................................................................................................................2240.2510100000000
....................................................................................................................................................................................................................G--------------------CCACGAGAGCGACG------------------------------------AGGCGCCGC.......................................................................................................................................................................................................24170.2440400000000
...................................................................................................................................................................................................................GG--------------------CCACGAGAGCGACG------------------------------------AGG.............................................................................................................................................................................................................19180.2240400000000
...................................................................................................................................................................................................................GG--------------------CCACGAGAGCGACG------------------------------------AGGCG...........................................................................................................................................................................................................21180.2240400000000
...............................................................................................................................................................................................C------------------CGG--------------------CCACGAGAGCGACG------------------------------------AGGCGCCG........................................................................................................................................................................................................26180.2240400000000
....................................................................................................................................................................................................................G--------------------CCACGAGAGCGACG------------------------------------AGGCG...........................................................................................................................................................................................................20180.2240400000000
....................................................................................................................................................................................................................G--------------------CCACGAGAGCGACG------------------------------------AGGC............................................................................................................................................................................................................19180.2240400000000
...................................................................................................................................................................................................................GG--------------------CCACGAGAGCGACG------------------------------------AGGC............................................................................................................................................................................................................20180.2240400000000
..........................................................................................................................................................................................................................................CACGAGAGCGACG------------------------------------AGGCGCC.........................................................................................................................................................................................................20180.2240400000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---CGA---GGCGGGGAC----CGAGG..........1850.2010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................CCG--------------------------------------GG---CCGA---CGA---GGCGGGGAC----CGAG...........2550.2010000000100
..........................................................................................................................................................................................................................................CACGAGAGCGACG------------------------------------AGGCGCCGCCA.....................................................................................................................................................................................................24170.1830300000000
............G-----------------CGA-C-----AGG-------AG-----------------------GGA---AGGGCCA...................................................................................................................................................................................................................................................................................................................................................................................................................2060.1710100000000
..........CGG-----------------CGA-C-----AGG-------AG-----------------------GGA---AGGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................2060.1710100000000
..................................................................................................................................................................................................................CGG--------------------CCACGAGAGCGACG------------------------------------AGGCGC..........................................................................................................................................................................................................23180.1730200000100
..........CGG-----------------CGA-C-----AGG-------AG-----------------------GGA---AGGT......................................................................................................................................................................................................................................................................................................................................................................................................................1960.1710100000000
..........CGG-----------------CGA-C-----AGG-------AG-----------------------GGA---AGGG......................................................................................................................................................................................................................................................................................................................................................................................................................1960.1710100000000
............G-----------------CGA-C-----AGG-------AG-----------------------GGA---AGGGCCAC------------------................................................................................................................................................................................................................................................................................................................................................................................................2160.1710100000000
..............................................................................................................................................................................................CC------------------CGG--------------------CCACGAGAGCGACG------------------------------------AGGC............................................................................................................................................................................................................23180.1730200000100
...............................................................................................................................................................................................C------------------CGG--------------------CCACGAGAGCGACG------------------------------------AG..............................................................................................................................................................................................................20180.1730300000000
.............................................................................................................................................................................................................................................................................................................................................................................................................TGCAGTCCCG--------------------------------------GG---CCGA---CGA---GGCGGGT.....................2660.1710000000100
...................................................................................................................................................................................................................................................................................................................................................................................................................CCCG--------------------------------------GG---CCGA---CGA---GGCGGGGA....................2160.1710100000000
............G-----------------CGA-C-----AGG-------AG-----------------------GGA---AGGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................1960.1710100000000
.....................................................................................................................................................................................................................................................................................................................................................CT-GC----------CG---------CCG--------------------------ATGCAGTCCCG--------------------------------------GG---C........................................2360.1710100000000
............G-----------------CGA-C-----AGG-------AG-----------------------GGA---AGGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................1860.1710100000000
...............................................................................................................................................................................................C------------------CGG--------------------CCACGAGAGCGACG------------------------------------AGGT............................................................................................................................................................................................................22180.1730210000000
...........GG-----------------CGA-C-----AGG-------AG-----------------------GGA---AGGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................1960.1710010000000
..................................C-----AGG-------AG-----------------------GGA---AGGGCCAC------------------CAG----------------------------------------------------------------------.......................................................................................................................................................................................................................................................................................................................2060.1710100000000
....................................................................................GCCAC------------------CAG----------------------------------------------------------------------GAAGGAGGAGC............................................................................................................................................................................................................................................................................................................19180.1730300000000
...........GG-----------------CGA-C-----AGG-------AG-----------------------GGA---AGGGCCAC------------------CAG----------------------------------------------------------------------.......................................................................................................................................................................................................................................................................................................................2560.1710100000000
................................................................................................................................................................................................................................................................................................................TCC--------------GAGT------GGTA------CT-GC----------CG---------CCG--------------------------ATGC...........................................................................................2470.1410100000000
...............................................................................................................................................................................................................................................................................................................TTCC--------------GAGT------GGTA------CT-GC----------CG---------CCG--------------------------...............................................................................................2170.1410100000000
.................................................................................................................................................................................................................................................................................................................CC--------------GAGT------GGTA------CT-GC----------CG---------CCG--------------------------A..............................................................................................2070.1410100000000
....................................................................................................................................................................................................................................................................................................................................T------GGTA------CT-GC----------CG---------CCG--------------------------ATGCAGTCC......................................................................................2370.1410100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TCCCG--------------------------------------GG---CCGA---CGA---GGCGG.......................1970.1410100000000
................................................................................................................................................................................................................................................................................................................TCC--------------GAGT------GGTA------CT-GC----------CG---------CCG--------------------------A..............................................................................................2170.1410100000000
............................................................................................................................................................................................................................................................................................................CCATTCC--------------GAGT------GGTA------CT-GC----------.......................................................................................................................................1970.1410010000000
....................................................................................................................................................................................................................................................................................................................................T------GGTA------CT-GC----------CG---------CCG--------------------------ATGC...........................................................................................1870.1410100000000
...............................................................................................................................................................................................................................................................................................................TTCC--------------GAGT------GGTA------CT-GC----------CG---------CCG--------------------------ATGCA..........................................................................................2670.1410100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................TGCAGTCCCG--------------------------------------GG---CCGA---CGA---GGCGG.......................2470.1410100000000
..........................................................................................................................................................................................................................................................................................................CGCCATTCC--------------GAGT------GGTA------CT-GC----------CG---------CC..........................................................................................................................2570.1410100000000
.....................................................................................................................................................................................................................................................................................................................................................................G---------CCG--------------------------ATGCAGTCCCG--------------------------------------GG---C........................................1870.1410100000000
................................................................................................................................................................................................................................................................................................................................................................................CG--------------------------ATGCAGTCCCG--------------------------------------GG---CCGA---C.................................2070.1410100000000
GGAGGCGCGGCGG-----------------CGA-C-----AGG-------AG-----------------------GG..............................................................................................................................................................................................................................................................................................................................................................................................................................2470.1410100000000
.................................................................................................................................................................................................................................................................................................................CC--------------GAGT------GGTA------CT-GC----------CG---------CCG--------------------------ATG............................................................................................2270.1410100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................TGCAGTCCCG--------------------------------------GG---CCGA---CGA---GGCGT.......................2470.1410100000000
.............................................................................................................................................................................................................................................................................................................................................TA------CT-GC----------CG---------CCG--------------------------ATGCAGTCCC.....................................................................................2170.1410100000000
...............................................................................................................................................................................................................................................................................................................TTCC--------------GAGT------GGTA------CT-GC----------CG---------CCG--------------------------ATGCAGTC.......................................................................................2970.1410100000000
..................................................................................................................................................................................................................................................................................................................C--------------GAGT------GGTA------CT-GC----------CG---------CCG--------------------------ATGCA..........................................................................................2370.1410100000000
..........................................................................................................................................................................................................................................................................................................CGCCATTCC--------------GAGT------GGTA------CT-GC----------.......................................................................................................................................2170.1410100000000
.............................................................................................................................................................................................................................................................................................................................................TA------CT-GC----------CG---------CCG--------------------------ATGCAGTCC......................................................................................2070.1410100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................TGCAGTCCCG--------------------------------------GG---CCGA---CGA---GGC.........................2270.1410100000000
..................................................................................................................................................................................................................................................................................................................C--------------GAGT------GGTA------CT-GC----------CG---------CCG--------------------------AT.............................................................................................2070.1410100000000
............................................................................................................................................................................................................................................................................................................................................GTA------CT-GC----------CG---------CCG--------------------------ATGCAGTCC......................................................................................2170.1410100000000
...............................................................................................................................................................................................................................................................................................................TTCC--------------GAGT------GGTA------CT-GC----------CG---------C...........................................................................................................................1970.1410100000000
....................................................................................................................................................................................................................................................................................................................................................................CG---------CCG--------------------------ATGCAGTCCCG--------------------------------------GG---CCGA---..................................2270.1410100000000
...........................................................................................................................................................................................................................................ACGAGAGCGACG------------------------------------AGGCGCCGCCA.....................................................................................................................................................................................................23170.1220200000000
..........................................................................................................................................................................................................................................CACGAGAGCGACG------------------------------------AGGCGCCGC.......................................................................................................................................................................................................22170.1220200000000
....................................................................................................................................................................................................................G--------------------CCACGAGAGCGACG------------------------------------AGGCGCCGCC......................................................................................................................................................................................................25170.1220200000000
...........................................................................................................CAG----------------------------------------------------------------------GAAGGAGGAGCC------------------CGG--------------------CCACGAG...........................................................................................................................................................................................................................................................25180.1120200000000
..................................................................................................................................................................................................................CGG--------------------CCACGAGAGCGACG------------------------------------AGGCGCCG........................................................................................................................................................................................................25180.1120200000000
...............................................................................................................................................................................................C------------------CGG--------------------CCACGAGAGCGACG------------------------------------AGGA............................................................................................................................................................................................................22180.1120200000000
....................................................................................................................................................................................................................G--------------------CCACGAGAGCGACG------------------------------------AGGCGCC.........................................................................................................................................................................................................22180.1120200000000
..............................................................................................................................................................................................CC------------------CGG--------------------CCACGAGAGCGACG------------------------------------AG..............................................................................................................................................................................................................21180.1120100000100
..........................................................................................................................................................................................................................................CACGAGAGCGACG------------------------------------AGGCGCCA........................................................................................................................................................................................................21180.1120200000000
..........................................................................................................................................................................................GGAGCC------------------CGG--------------------CCACGAGAGCG.......................................................................................................................................................................................................................................................20190.1120200000000
..............................................................................................................................................................................................CC------------------CGG--------------------CCACGAGAGCGACG------------------------------------A...............................................................................................................................................................................................................20190.1120200000000
........................................................................................................................................................................................GAGGAGCC------------------CGG--------------------CCACGAGAGCGACG------------------------------------A...............................................................................................................................................................................................................26190.1120200000000
..........CGG-----------------CGA-C-----AGG-------AG-----------------------GGA---AGA.......................................................................................................................................................................................................................................................................................................................................................................................................................18100.1010100000000
....................................................................................................................................................................................................................................................................................................CACCCCCGCCATTCC--------------GAGT------GGTA------C.....................................................................................................................................................24100.1010100000000
.....................................................................................................................................................................................................................................................................................................................................................CT-GC----------CG---------CCG--------------------------ATGCAGTCCCG--------------------------------------G.............................................21100.1010100000000
.GAGGCGCGGCGG-----------------CGA-C-----AGG-------AG-----------------------................................................................................................................................................................................................................................................................................................................................................................................................................................21110.0910100000000
............................................................................................................................................................................................................................................CGAGAGCGACG------------------------------------AGGCGCCGCCACC...................................................................................................................................................................................................24170.0610100000000
...................................................................................................................................................................................................................GG--------------------CCACGAGAGCGACG------------------------------------AGGCGCCGC.......................................................................................................................................................................................................25170.0610100000000
....................................................................................................................................................................................GAAGGAGGAGCC------------------CGG--------------------CCACGAGAGC........................................................................................................................................................................................................................................................25170.0610100000000
............................................................................................................................................................................................................................................CGAGAGCGACG------------------------------------AGGCGCCGCC......................................................................................................................................................................................................21170.0610100000000
..........................................................................................................................................................................................................................................CACGAGAGCGACG------------------------------------AGGCGCCGCC......................................................................................................................................................................................................23170.0610100000000
...........................................................................................................................................................................................................................................ACGAGAGCGACG------------------------------------AGGCGCCGCCAC....................................................................................................................................................................................................24170.0610100000000
..............................................................................................................................................................................................CC------------------CGG--------------------CCACGAGAGCGACG------------------------------------AGGCGCCGC.......................................................................................................................................................................................................28170.0610100000000
............................................................................................................................................................................................................................................CGAGAGCGACG------------------------------------AGGCGCCGC.......................................................................................................................................................................................................20170.0610100000000
...............................................................................................................................................................................................C------------------CGG--------------------CCACGAGAGCGACG------------------------------------AGGCGCCGC.......................................................................................................................................................................................................27170.0610100000000
...................................................................................................................................................................................................................GG--------------------CCACGAGAGCGACG------------------------------------AGGCGCCGCC......................................................................................................................................................................................................26170.0610100000000
..........................................................................................................................................................................................................................................CACGAGAGCGACG------------------------------------AGGCGCCGCCAC....................................................................................................................................................................................................25170.0610100000000
........................................................................................................................................................................................GAGGAGCC------------------CGG--------------------CCACGAGAGCGACG------------------------------------AG..............................................................................................................................................................................................................27180.0610100000000
...................................................................................................................................................................................................................GG--------------------CCACGAGAGCGACG------------------------------------AGGCGCC.........................................................................................................................................................................................................23180.0610100000000
......................................................................................CAC------------------CAG----------------------------------------------------------------------GAAGGAGGAGCC------------------C........................................................................................................................................................................................................................................................................................19180.0610100000000
....................................................................................................................................................................................................................G--------------------CCACGAGAGCGACG------------------------------------AGGCGT..........................................................................................................................................................................................................21180.0610100000000
..............................................................................................................................................................................................CC------------------CGG--------------------CCACGAGAGCGACG------------------------------------AGA.............................................................................................................................................................................................................22180.0610100000000
.............................................................................................................................................................................................GCC------------------CGG--------------------CCACGAGAGCGACG------------------------------------AG..............................................................................................................................................................................................................22180.0610100000000
........................................................................................C------------------CAG----------------------------------------------------------------------GAAGGAGGAGCC------------------CGG--------------------..................................................................................................................................................................................................................................................................19180.0610100000000
.....................................................................................CCAC------------------CAG----------------------------------------------------------------------GAAGGAGGAGCC------------------C........................................................................................................................................................................................................................................................................................20180.0610100000000
...........................................................................................................CAG----------------------------------------------------------------------GAAGGAGGAGCC------------------CGG--------------------..................................................................................................................................................................................................................................................................18180.0610010000000
..............................................................................................................................................................................................CC------------------CGG--------------------CCACGAGAGCGACG------------------------------------AGGCGCC.........................................................................................................................................................................................................26180.0610100000000
....................................................................................................................................................................................GAAGGAGGAGCC------------------CGG--------------------CCA...............................................................................................................................................................................................................................................................18180.0610100000000
...............................................................................................................................................................................................C------------------CGG--------------------CCACGAGAGCGACG------------------------------------AGGG............................................................................................................................................................................................................22180.0610000100000
.....................................................................................CCAC------------------CAG----------------------------------------------------------------------GAAGGAGGAGC............................................................................................................................................................................................................................................................................................................18180.0610100000000
...........................................................................................................................................................................................GAGCC------------------CGG--------------------CCACGAGAGCGACG------------------------------------AGG.............................................................................................................................................................................................................25180.0610100000000
..............................................................................................................................................................................................CC------------------CGG--------------------CCACGAGAGCGACG------------------------------------AGGCGCCG........................................................................................................................................................................................................27180.0610100000000
.............................................................................................................................................................................................GCC------------------CGG--------------------CCACGAGAGCGACG------------------------------------AGGCGCC.........................................................................................................................................................................................................27180.0610100000000
..............................................................................................................................................................................................CC------------------CGG--------------------CCACGAGAGCGACG------------------------------------AGGCGC..........................................................................................................................................................................................................25180.0610000000100
........................................................................................C------------------CAG----------------------------------------------------------------------GAAGGAGGAGCC------------------CGG--------------------C.................................................................................................................................................................................................................................................................20180.0610100000000
..........................................................................................................................................................................................GGAGCC------------------CGG--------------------CCACGAGAGCGACG------------------------------------AGG.............................................................................................................................................................................................................26180.0610100000000
.........................................................................................................................................................................................................................................CCACGAGAGCGACG------------------------------------AGGCGCCG........................................................................................................................................................................................................22180.0610100000000
......................................................................................CAC------------------CAG----------------------------------------------------------------------GAAGGAGGAGCC------------------CGG--------------------C.................................................................................................................................................................................................................................................................22180.0610100000000
....................................................................................................................................................................................GAAGGAGGAGCC------------------CGG--------------------CCACGAG...........................................................................................................................................................................................................................................................22180.0610100000000
....................................................................................GCCAC------------------CAG----------------------------------------------------------------------GAAGGAGGAGCC------------------CGT--------------------TT................................................................................................................................................................................................................................................................25180.0610100000000
..........................................................................................................................................................................................................................................CACGAGAGCGACG------------------------------------AGGCGC..........................................................................................................................................................................................................19180.0610100000000
............................................................................................................AG----------------------------------------------------------------------GAAGGAGGAGCC------------------CGG--------------------CC................................................................................................................................................................................................................................................................19180.0610100000000
....................................................................................................................................................................................................................G--------------------CCACGAGAGCGACG------------------------------------AGGCGCCGT.......................................................................................................................................................................................................24180.0610100000000
....................................................................................GCCAC------------------CAG----------------------------------------------------------------------GAAGGAGGAGCC------------------CGG--------------------..................................................................................................................................................................................................................................................................23180.0610100000000
............................................................................................................................................................................................................................................CGAGAGCGACG------------------------------------AGGCGCCG........................................................................................................................................................................................................19180.0610100000000
....................................................................................GCCAC------------------CAG----------------------------------------------------------------------GAAGGAGGAGCC------------------CG.......................................................................................................................................................................................................................................................................................22180.0610100000000
....................................................................................................................................................................................................................G--------------------CCACGAGAGCGACG------------------------------------AGG.............................................................................................................................................................................................................18180.0610100000000
......................................................................................CAC------------------CAG----------------------------------------------------------------------GAAGGAGGAGCC------------------CG.......................................................................................................................................................................................................................................................................................20180.0610100000000
......................................................................................CAC------------------CAG----------------------------------------------------------------------GAAGGAGGAGCC------------------CGG--------------------..................................................................................................................................................................................................................................................................21180.0610100000000
....................................................................................................................................................................................GAAGGAGGAGCC------------------CGG--------------------CCACGAGA..........................................................................................................................................................................................................................................................23180.0610100000000
..........................................................................................................................................................................................................................................CACGAGAGCGACG------------------------------------AGGCGCCG........................................................................................................................................................................................................21180.0610100000000
............................................................................................................................................................................................................................................CGAGAGCGACG------------------------------------AGGCGCC.........................................................................................................................................................................................................18180.0610100000000
........................................................................................................................................................................................GAGGAGCC------------------CGG--------------------CCACGAGAGCGACG------------------------------------................................................................................................................................................................................................................25190.0510000000100
........................................................................................................................................................................................GAGGAGCC------------------CGG--------------------CCACGAGAGCGAC.....................................................................................................................................................................................................................................................24190.0510100000000
.......................................................................................................................................................................................GGAGGAGCC------------------CGG--------------------CCACGAGAGCGAC.....................................................................................................................................................................................................................................................25190.0510100000000
...........................................................................................................................................................................................GAGCC------------------CGG--------------------CCACGAGAGCGACG------------------------------------A...............................................................................................................................................................................................................23190.0510100000000
...........................................................................................................................................................................................GAGCC------------------CGG--------------------CCACGAGAGCGTT.....................................................................................................................................................................................................................................................21190.0510100000000
........................................................................................................................................................................................GAGGAGCC------------------CGG--------------------CCACGAGAGCG.......................................................................................................................................................................................................................................................22190.0510100000000
.....................................................................................................................................................................................................................................................CG------------------------------------AGGCGCCGCCACCCCCGT..............................................................................................................................................................................................20190.0510100000000
..........................................................................................................................................................................................GGAGCC------------------CGG--------------------CCACGAGAGCGACG------------------------------------A...............................................................................................................................................................................................................24190.0510100000000
..........................................................................................................................................................................................GGAGCC------------------CGG--------------------CCACGAGAGCGT......................................................................................................................................................................................................................................................21190.0510100000000
......................................................................................................................................................................................AGGAGGAGCC------------------CGG--------------------CCACGAGAGCGACG------------------------------------................................................................................................................................................................................................................27190.0510100000000
.........................................................................................................................................................................................AGGAGCC------------------CGG--------------------CCACGAGAGCGAC.....................................................................................................................................................................................................................................................23190.0510100000000
...............................................................................................................................................................................................C------------------CGG--------------------CCACGAGAGCGACG------------------------------------A...............................................................................................................................................................................................................19190.0510100000000
........................................................................................................................................................................................GAGGAGCC------------------CGG--------------------CCACGAGAGC........................................................................................................................................................................................................................................................21200.0510100000000
.......................................................................................................................................................................................GGAGGAGCC------------------CGG--------------------CCACGAG...........................................................................................................................................................................................................................................................19200.0510100000000
droWil2
GCGGGTGCAGCAG-----------------GGG-C-----GAG------------------------------TATGAC---G------GCAG------T---------------------------------------------------------------------TGGGCCAGCAGGGGCGAGGGTGA------------------CAGCGGAGGGCCCGGCAGGGGCG----------GA------------------------------TGCAGCAG---------------CGGCGGGCC--------------CGGC------A------------GG----------TG---------CGG--AT--------GCAGCGG----------------------------------------------------------CGGCGGG---CCC---AGCAGGGGC----GGATGC--------ASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................................................................................................................................................................................................................................................................................A------------GG----------TG---------CGG--AT--------GCAGCGG----------------------------------------------------------CGGC........................................2130.33100100
...............................................................................................................................................................................................A------------------CAGCGGAGGGCCCGGCAGGGGCG----------GA------------------------------........................................................................................................................................................................................................................2640.25100100
.....................................................................................................................................................................................................................................................................................CAGCAG---------------CGGCGGGCC--------------CGGC------A------------GG----------T......................................................................................................................................2370.14101000
.......................................................................................................................................................................................................................................CG----------GA------------------------------TGCAGCAG---------------CGGCGGGC.........................................................................................................................................................................................20200.10202000
...........................................................................TGAC---G------GCAG------T---------------------------------------------------------------------TGGGCCAGCAGGGG....................................................................................................................................................................................................................................................................................................................24200.05100010
.........................................................................TATGAC---G------GCAG------T---------------------------------------------------------------------TGGGCCAGCAGGGG....................................................................................................................................................................................................................................................................................................................26200.05101000
..........................................................................ATGAC---G------GCAG------T---------------------------------------------------------------------TGGGCCAG..........................................................................................................................................................................................................................................................................................................................19200.05101000
...........................................................................................AG------T---------------------------------------------------------------------TGGGCCAGCAGGGGCG..................................................................................................................................................................................................................................................................................................................19200.05100010
.....................................................................................................................................................................................................................................GGCG----------GA------------------------------TGCAGCAG---------------CGGCGGGC.........................................................................................................................................................................................22200.05101000
..........................................................................................CAG------T---------------------------------------------------------------------TGGGCCAGCAGGGGCG..................................................................................................................................................................................................................................................................................................................20200.05101000
.........................................AG------------------------------TATGAC---G------GCAG------T---------------------------------------------------------------------TGGGCCA...........................................................................................................................................................................................................................................................................................................................21200.05101000
...........................................................................TGAC---G------GCAG------T---------------------------------------------------------------------TGGGCCAGCAG.......................................................................................................................................................................................................................................................................................................................21200.05101000
.......................................................................................................................................................................................................................GAGGGCCCGGCAGGGGCG----------GA------------------------------TGC.....................................................................................................................................................................................................................23200.05100001
..........................................................................ATGAC---G------GCAG------T---------------------------------------------------------------------TGGGCCAGCAGGGG....................................................................................................................................................................................................................................................................................................................25200.05101000
....GTGCAGCAG-----------------GGG-C-----GAG------------------------------TATG..............................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100100
droVir3
GGCGGCGGCGGCG-----------------GCGGC-----GGA-------GGA------------------------G---GCGGCGGT------------------TAC----------------------------------GGT-GGCGGCGGTCATGTAAGCACCTTTGCTATCATCACCGAGAATCA------------------T----------------------------------------------------------------------------G-----------------------------------GC------GCCT------CG-GG----------TG---------GCG-GTC--------ATTACGG----------------------------------------------------------CGGCGGC---GGC---GGCGGCGGC----TATAGC--------GSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
GGCGCCAGCGGCA-----------------GCAGC-----AGC-------GGC------------------------G---GCGGCGGT--------------------------------------------------------------------------------GTCAGCTCCATGGACGAGGACTC------------------CAT--------------------GCAGGCGCCCGATG------------------AGCCAGCAACGCCGCCAT---------------CGCCGCTGC--------------CAGC------AGT----------------------GG---------CA--GCA--------GCAGCAG----------------------------------------------------------CAGCAGC---AGC---GGCGGCGGC----GGCAGC--------GSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................................................................................................................................................................GTCAGCTCCATGGACGAGG...............................................................................................................................................................................................................................................................................................................1911.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGC---AGC---GGCGGCGGC----GGCAGC--------.22100.101000010
.................................................................................................................................................................................................................................................................................................................................................................................................GCAG----------------------------------------------------------CAGCAGC---AGC---GGCGGCGGC----GG.............25100.101100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGC---AGC---GGCGGCGGC----GGCAG..........21100.101100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC---GGCGGCGGC----GGCAGC--------G19110.091100000
.........GGCA-----------------GCAGC-----AGC-------GGC------------------------G---GC........................................................................................................................................................................................................................................................................................................................................................................................................................18200.051100000
droGri2
GCAACAGCAGCAG-----------------CAG-C--AACAGG-------A-----------------------GCAACAGGA---------GCAGGAGCATGAGCA--ACT-----------------------------------------------------------------------GGAG--------------------------------------------------------GATG------------------------------------AGGA------------GCAATTGC--------------AGCT------GGAA------CT-GC----------GG---------GTG--------------------------GAGGACGAGCG--------------------------------------GG---CTGC---C-----GATGCGGAT----GATGAG--------GSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.........................................GG-------A-----------------------GCAACAGGA---------GCAGGAGCA......................................................................................................................................................................................................................................................................................................................................................................................................2130.33110
......GCAGCAG-----------------CAG-C--AACAGG-------A-----------------------GCA..............................................................................................................................................................................................................................................................................................................................................................................................................................2190.11110
...ACAGCAGCAG-----------------CAG-C--AACAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05110
droAna3
GGACGCCGAGGAG-----------------GAGGA-----GGA-------GGA------------------------G---GAG---------------GCTGAGGA--CGA-----------------------------------------------------------------------GGAGGAGGACGACAACGCCTCGATGCAGTC--------------------GAACGCCGACG---------------------------------------ACATGGAGCTGG---A--------CG---------------------G-----------------CCCGCAGGAGGCGG----------TC--------GCCGGGA----------------------------------------------------------TGGCG-----------GCCGAG-GC---CGAGGCG--------GSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................GAGGA-----GGA-------GGA------------------------G---GAG---------------GC......................................................................................................................................................................................................................................................................................................................................................................................................17200.051000100
......CGAGGAG-----------------GAGGA-----GGA-------GGA------------------------G---GA........................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
...........AG-----------------GAGGA-----GGA-------GGA------------------------G---GAG---------------G.......................................................................................................................................................................................................................................................................................................................................................................................................18200.051100000
.......GAGGAG-----------------GAGGA-----GGA-------GGA------------------------G---G.........................................................................................................................................................................................................................................................................................................................................................................................................................19200.051100000
droBip1
GGAGCTCGACCAG-----------------GAC-C--AGGAGC-------A-----------------GGATCAA------GA---------GCCGGAGCCAGAGCA--GGA-----------------------------------------------------------------------GCAGGAGCCGGACAATG------------------------------GCA-----GCAGCGACC------------------------------------ACATCGAGCTATCCCCA-------TCGC--------------------------------------CCACTCTAACCGGTGACGATG--------AT--GTAA---------------GTCCTG-------------------------------------------CGCA---CAA---GGTGGAGGC----TCCGGG--------CSizeHit CountTotal NormTotal
No Reads
droKik1
GGCACCGGCGGCG-----------------GAAGA-----AGC-------GGA------------------------A---GCAGCAAC------------------CAC----------------------------------------------------------------------GCGAGAGGTGTC------------------CAT--------------------G---GCGAGCATCA------------------AGACTGAGATGCCGCCAC---------------TGCACGC--------------------------GGCAGAGGCGCTCGCCG--------C-------------------------------------------------------------CAGCAG-----------------------TGCCACC---GAC---AGCGGCGGG----GGAACG--------GSizeHit CountTotal NormTotal
No Reads
droFic1
GGTGGTGCTGGTG-----------------GAT-C--GACAGCAGGAGCAG------------------------------GA---------GCG----------------------------------------------------------------------------------------GCAGGAGCCCAGCAGTT----------GGT--------------------TCAACTGCCCGCCGGGAGCATTGTGAGCACCACCACCCACCGATTGT-----------------------------------------CGGTGCCCGTGACCGAGGC---------------------------------------------------------GGCTC--TCGTG--------------------------------------CAGCTGC---AGC---GTCGGCCCG----TTTACA--------TSizeHit CountTotal NormTotal
No Reads
droEle1
GGAGGACGCGAGC-----------------GAGGA-----GGA-------GGA------------------------G---GGG----------------------------------------------------------------------------------------------------ACGGAGACCATCAGCCCCGAAGTGTCCTC--------------------GGACGAAGACGACG------------------------------------TGGCGCGGCGAGCTGCGAGGGACC--------------GGAT------GGTT------T--TCCG--------CC---------GGT--TGAGCAG--GGCAACGG---------------------------------------------------------------------------CTGGG-CT---CGGGAGGATCTGCCTASizeHit CountTotal NormTotal
No Reads
droRho1
GCAGCG-CAGCAG-----------------CAG---------------------------------CAGCATGAGCGAG---C------GCAG------CT-CGG--CGGCAGCAGCGGCGGCGGCGGCAGCAGCGGCGGTAGCGGCCGCCGG-------------------------------------------------------------------------------------------------------------------------------------------------CGGTAATGT--------------CAAT------GCGG------CC-GC----------CG---------TCG--CCCTCGG--GCTGACC----------------ACGCCCAGCGGCGG--------------------------------CG-----------AACGATCTC----CGAGCG--------TSizeHit CountTotal NormTotal
No Reads
droBia1
GGAGGAGCAGCCG-----------------CCGGA-----GGA-GGA---GCA------------------------C---GAG---------CCGG-------------------------------------------------------------------------------------AGCAGGAGCC------------------CGG--------------------CGAGGAG---TA---------------------------------------------------CTCA-------TCGGGCGAGCTGCTCGCC------A------------------------------------GG--------CTGGGAGTCAGCCGCTCGGATCAGTC-----------------------------------------GG---CGGA---CCAGTCGCTGGA-CC---TGAGCGG--------CSizeHit CountTotal NormTotal
No Reads
droTak1
GGGAGCGATGTCG-----------------GGCGC-----GGC-------CAG------------------------C---GGG---------------GCCTACGG--AGC-----------------------------------------------------------------------CCTGGGAGCGGGCAATG----------CCT--------------------CGGCCAGTCCGCTGG--------------------------------------------------GCGCC----------------------------------------------CCGCTCACACCGCC-------------------GCCATCG-------GCGCAGTCCTGCCTTTTG--GGCAGTCG---------------------------------------GGCCCCGGG----CGCCGA--------GSizeHit CountTotal NormTotal
No Reads
droEug1
GAAAATACCGATGAGCGCAAGGAGCGGCTG------------------------TCAAAGCAGGCGGAGTATGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------CGAATGCGACGC-----------------------------------ATGCGCAGTCAT---A--------CG---------------------C-----------------CACGTAG---------------------------------------------------------------CAGCAGTGCCACAAGCACCGAGTTCCGGG---CCAAAACCGA---GGAGGAGGATGACGATGAG--------GSizeHit CountTotal NormTotal
No Reads
dm3
GGCAGCGGTGGCG-----------------GCAGC-----GCA-------GG-----------------------CGC---AGCACCAC------------------CAG----------------------------------------------------------------------CAGCAACAGGCA------------------CAG--------------------GCGCACCACCAGCA------------------------------------CCATGC-ACTTTCCTCG-------CCGGGCCCGGTGCCCGGT------AGT------------------------------------------CAT--GGCCATGG-------CTACAGTCATGGATC----------------------------------GC---CGTT---CGA---CGCTGGATC----GTTGGA--------GSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................ATC----------------------------------GC---CGTT---CGA---CGCTGGATC----GT.............2315.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000001000000
.................................................................................................................................................................................................................................................CCAGCA------------------------------------CCATGC-ACTTTCCTCG-------CCG.....................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................CATGGATC----------------------------------GC---CGTT---CGA---CGCTGGAT....................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................AGTCATGGATC----------------------------------GC---CGTT---CGA---C...........................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................CTACAGTCATGGATC----------------------------------GC---CGTT---..................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000200000000
..................................................................................................................................................................................................................................................................................................................................GGT------AGT------------------------------------------CAT--GGCCATGG-------C..............................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................ATC----------------------------------GC---CGTT---CGA---CGCTGGATC----GTTGG..........2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................ATC----------------------------------GC---CGTT---CGA---CGCTGGATC----GTTGGA--------.2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................CATGGATC----------------------------------GC---CGTT---CGA---CGCT........................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
..........................................................................................................................................................................................................................................................................................................................................................................................T--GGCCATGG-------CTACAGTCATGGATC----------------------------------G.............................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................CATGGATC----------------------------------GC---CGTT---CGA---CGCTGG......................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000010000000000000000000000000
................................AGC-----GCA-------GG-----------------------CGC---AGCACCAC------------------CAG----------------------------------------------------------------------CA.....................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................G-------CTACAGTCATGGATC----------------------------------GC---C........................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
..............................GCAGC-----GCA-------GG-----------------------CGC---AGCACCAC------------------CAG----------------------------------------------------------------------.......................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---CGTT---CGA---CGCTGGATC----GTT............2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................TGCCCGGT------AGT------------------------------------------CAT--GGCCATGG-------C..............................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGA---CGCTGGATC----GTTGGA--------.1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GCAGCGGTGGCG-----------------GCAGC-----GC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................CATGGATC----------------------------------GC---CGTT---CGA---CGC.........................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................TACAGTCATGGATC----------------------------------GC---CGTT---CGA---CGCT........................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................GGCCCGGTGCCCGGT------AGT------------------------------------------CAT--GGCCA.........................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TCATGGATC----------------------------------GC---CGTT---CGA---CGCTGG......................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................ATGG-------CTACAGTCATGGATC----------------------------------GC---C........................................2212.0020000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................CATGGATC----------------------------------GC---CGTT---CGA---CGCTGGATC----...............2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..............................................................................................................................................................................................................................................................................................................................................................................................................ACAGTCATGGATC----------------------------------GC---CGTT---CG................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TC----------------------------------GC---CGTT---CGA---CGCTGGATC----GTTG...........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................G-------CTACAGTCATGGATC----------------------------------GC---CGTT---..................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................GCCCGGTGCCCGGT------AGT------------------------------------------CAT--GGCCATGG-------C..............................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................CATGC-ACTTTCCTCG-------CCGGG...................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................AGCA------------------------------------CCATGC-ACTTTCCT.................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................GCAACAGGCA------------------CAG--------------------GCGCACCAC.........................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................ATC----------------------------------GC---CGTT---CGA---CGCTGGATC----GTT............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.....................................................................................................................................................................................AGCAACAGGCA------------------CAG--------------------GCGCA.............................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................GATC----------------------------------GC---CGTT---CGA---CGCTGGATC----...............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................CAGCAACAGGCA------------------CAG--------------------GCGCACC...........................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................GATC----------------------------------GC---CGTT---CGA---CGCTGG......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---CGTT---CGA---CGCTGGATC----GTTGG..........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATC----------------------------------GC---CGTT---CGA---CGCT........................2011.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................CCCGGTGCCCGGT------AGT------------------------------------------CAT--GGCCATGG-------C..............................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................AACAGGCA------------------CAG--------------------GCGCACCACCAG......................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................CATGG-------CTACAGTCATGGAT.................................................................................1911.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................CAG--------------------GCGCACCACCAGCA------------------------------------CCATG...........................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TC----------------------------------GC---CGTT---CGA---CGCTGGA.....................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GCGGTGGCG-----------------GCAGC-----GCA-------GG-----------------------CGT---..........................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTT---CGA---CGCTGGATC----GTTG...........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................CCAC------------------CAG----------------------------------------------------------------------CAGCAACAGGCA------------------CAG--------------------GCGC..............................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................................CA-------GG-----------------------CGC---AGCACCAC------------------CAG----------------------------------------------------------------------CAG....................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................C---AGCACCAC------------------CAG----------------------------------------------------------------------CAGCAACAGG.............................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................GTGCCCGGT------AGT------------------------------------------CAT--GGCCATGG-------C..............................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................CAC------------------CAG----------------------------------------------------------------------CAGCAACAGGCA------------------CAG--------------------GCGCA.............................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................G-------CTACAGTCATGGATC----------------------------------GC---CGT......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................ACAGTCATGGATC----------------------------------GC---CGTT---CGA---CGCTGG......................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................AG--------------------GCGCACCACCAGCA------------------------------------CCATG...........................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................C-----GCA-------GG-----------------------CGC---AGCACCAC------------------CAG----------------------------------------------------------------------CA.....................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TC----------------------------------GC---CGTT---CGA---CGCTGGATC----...............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GGATC----------------------------------GC---CGTT---CGA---CGCTGGATC----GTT............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................TACAGTCATGGATC----------------------------------GC---CGTT---CGA---C...........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CAGCGGTGGCG-----------------GCAGC-----GCA-------GG-----------------------C...............................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTT---CGA---CGCTGGATC----GTTG...........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................AG----------------------------------------------------------------------CAGCAACAGGCA------------------CAG--------------------GCGC..............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
..................................C-----GCA-------GG-----------------------CGC---AGCACCAC------------------CAG----------------------------------------------------------------------C......................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................AGTCATGGATC----------------------------------GC---CGTT---CGA---CGCTGGA.....................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................CAACAGGCA------------------CAG--------------------GCGCACCACC........................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................AGCAACAGGCA------------------CAG--------------------GCGCAC............................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................ACAGTCATGGATC----------------------------------GC---CGTT---CGA---CGCT........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................GCCCGGTGCCCGGT------AGT------------------------------------------CAT--GGCCATG.......................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................AGTCATGGATC----------------------------------GC---CGTT---CGA---CGCTGG......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................AC------------------CAG----------------------------------------------------------------------CAGCAACAGGCA------------------CAG--------------------GCGC..............................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................C----------------------------------GC---CGTT---CGA---CGCTGGATC----GTTGGA--------.2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................TACAGTCATGGATC----------------------------------GC---CGT......................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................CTACAGTCATGGATC----------------------------------GC---CG.......................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
...........................................................................................................CAG----------------------------------------------------------------------CAGCAACAGGCA------------------CAG--------------------GCG...............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................CACCACCAGCA------------------------------------CCATGC-ACTTTC...................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TC----------------------------------GC---CGTT---CGA---CGCTGGATC----GTTGG..........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................AACAGGCA------------------CAG--------------------GCGCACCACC........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATC----------------------------------GC---CGTT---CGA---CGCTGGATC----...............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................TTCCTCG-------CCGGGCCCGGTGCC..........................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................ACTTTCCTCG-------CCGGGCCCG...............................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................A------------------------------------CCATGC-ACTTTCCTCG-------CCGGGCCCG...............................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................AGCACCAC------------------CAG----------------------------------------------------------------------CAGCAACAGG.............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................CACCAGCA------------------------------------CCATGC-ACTTTCCTCG-------C.......................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GGATC----------------------------------GC---CGTT---CGA---CGCT........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................TACAGTCATGGATC----------------------------------GC---CGTT---C.................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................TGCCCGGT------AGT------------------------------------------CAT--GGCCATGG-------CTAC...........................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................C-----GCA-------GG-----------------------CGC---AGCACCAC------------------CAG----------------------------------------------------------------------CAGCA..................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TCATGGATC----------------------------------GC---CGTT---CGA---CGCT........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
........................................................................................................................................................................................................................................................................................................................CCCGGTGCCCGGT------AGT------------------------------------------CAT--GGCT..........................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................G----------------------------------------------------------------------CAGCAACAGGCA------------------CAG--------------------GCGCACCA..........................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TGG-------CTACAGTCATGGATC----------------------------------GC---CGTT---C.................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................GC-----GCA-------GG-----------------------CGC---AGCACCAC------------------CAG----------------------------------------------------------------------CA.....................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TGGATC----------------------------------GC---CGTT---CGA---CGCTGG......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................G-------CTACAGTCATGGATC----------------------------------GC---CG.......................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTT---CGA---CGCTGGATC----GTTGGA--------.2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................AGCACCAC------------------CAG----------------------------------------------------------------------CAGCAACAGGCA------------------CA.......................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................C----------------------------------GC---CGTT---CGA---CGCTGGATC----G..............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................A-------GG-----------------------CGC---AGCACCAC------------------CAG----------------------------------------------------------------------CAGC...................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................C----------------------------------GC---CGTT---CGA---CGCTGGATC----GT.............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...AGCGGTGGCG-----------------GCAGC-----GCA-------GG-----------------------A...............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---CGA---CGCTGGATC----GTTGGA--------.1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................CGGT------AGT------------------------------------------CAT--GGCCATGG-------C..............................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---CGTT---CGA---CGCTGGATC----GTC............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
......GGTGGCG-----------------GCAGC-----GCA-------GG-----------------------CGC---AGC.......................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000
...AGCGGTGGCG-----------------GCAGC-----GCA-------G........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................GGCCCGGTGCCCGGT------AGT------------------------------------------CAT--GGC...........................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTT---CGA---CGCTGGATC----GTTGGA--------.2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................AGC-----GCA-------GG-----------------------CGC---AGCACCAC------------------CAG----------------------------------------------------------------------CAGCA..................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................AGCAACAGGCA------------------CAG--------------------GCGCACC...........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................................................................CGCACCACCAGCA------------------------------------CCATGC-AC.......................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................C---AGCACCAC------------------CAG----------------------------------------------------------------------CAGCAACAG..............................................................................................................................................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................GC---AGCACCAC------------------CAG----------------------------------------------------------------------CAGCAA.................................................................................................................................................................................................................................................................................................................1940.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GCAGCG-CAGCAG-----------------CAG---------------------------------CAGCATGAGCGAA---C------GCAG------CT-CGG--CGGCAGCAGCGGCGGCGGCGGCAGCAGCAGCGGTAGCGGCCGCCGG-------------------------------------------------------------------------------------------------------------------------------------------------CGGCAATGT--------------GAAT------GCGG------CT-GC----------CG---------TCG--------------------------CCCTGGGC----------------------------------------------CTGA---C-----CACGCCCAC----CGGCGG--------CSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................................................................................................................................................................................................................................................................................................................GGGC----------------------------------------------CTGA---C-----CACGCCCAC----CGGCG..........2311.00100010000000000000
droSec2
GGCTCCGGCGGCG-----------------GTGGCTCCGAGCGAGGAGGAAGTGCAGGAGGC-------------------------------------------------------------------------------------------------------------------------GGCGGAG------------------------------------------------------------------------------------TGCCGCCAC---------------AGCAACTGC--------------GAGT------GCCC------CT-GC----------CG---------ATGAGCT--------ATCATGG----------------------------------------------------------CGGAGCT---GGT---GGTGGGAGC----AGCAGC--------ASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........................................AGGAGGAAGTGCAGGAGGC-------------------------------------------------------------------------------------------------------------------------....................................................................................................................................................................................................................................................................................................................1911.0010010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCT---GGT---GGTGGGAGC----AGCAGC--------.2111.0010100
..............................................................................................................................................................................................................................................................................................................................................................................................ATCATGG----------------------------------------------------------CGGAGCT---GGT---GGTGGGAGC----A..............2711.0010100
.............................................................................................................................................................................................................................................................................................................AACTGC--------------GAGT------GCCC------CT-GC----------C......................................................................................................................................1911.0010010
......................................GAGCGAGGAGGAAGTGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100
droYak3
GAGAATACGGACGAGCGCAAGGAGCGCCTG------------------------TCCAAGCAGGCGGAATATGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------CGAATGCGACGC-----------------------------------ATGCGCAGCCAC---A--------CG---------------------C-----------------CGCGCAG---------------------------------------------------------------CAGCAGCGCCACCAGCACCGAGTTCCGTG---CCAAAACCGA---GGAGGAAGA----TGAGGG--------CSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................................................GGAATATGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------CGAATGCGACGC-----------------------------------ATGC............................................................................................................................................................................................................2611.00101000000000
................GCAAGGAGCGCCTG------------------------TCCAAGCAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
............GAGCGCAAGGAGCGCCTG------------------------TCCAAGCAGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100100000000
.....................................................................................................................................................................................................................................................CGC-----------------------------------ATGCGCAGCCAC---A--------CG---------------------C-----------------CGCGC..........................................................................................................................................2411.00100000010000
................GCAAGGAGCGCCTG------------------------TCCAAGCAGGCGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
............GAGCGCAAGGAGCGCCTG------------------------TCCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
........................................................................GCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------CGAATGCGACGC-----------------------------------ATGCGC..........................................................................................................................................................................................................2111.00101000000000
.................................................................................................................................................................................................................................................................................................AGCCAC---A--------CG---------------------C-----------------CGCGCAG---------------------------------------------------------------CAGC.....................................................................2111.00101000000000
droEre2
GGCGGAGAAGGCG-----------------GCTGC-----GGA-------T----------------------------------------------------------------------------GCCGCCAAGGCGGCGGAAAGCGCTGC-------------------------------------------------------------------------------------------------------------------------------------------------CGAGAAGGC--------------GAGC------GCCG------CC-AC----------CA---------AGG--CTGTCGA--GGCGACGG----------------------------------------------------------CTGCCGG---CGA---GAAGGTGGC----CAAGGC--------GSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................................................................................................................................................................................................................................................................................................................................G------CC-AC----------CA---------AGG--CTGTCGA--GGCGAC........................................................................................................2311.0011000000
........................................................................................................................................................C-------------------------------------------------------------------------------------------------------------------------------------------------CGAGAAGGC--------------GAGC------GCCG------CC-AC----------CA---------AGG--CT.....................................................................................................................2911.0010000100
................................................................................................................................................................................................................................................................................................................................................................................................GACGG----------------------------------------------------------CTGCCGG---CGA---GAAGGT......................2111.0010000100
........................................................................................................................................................................................................................................................................................................................................................................................CGA--GGCGACGG----------------------------------------------------------CTGCCGG---CGA---GAAGGT......................2711.0010000010

Generated: 06/08/2015 at 05:10 PM