ID:

dpe_2084

 Coordinate:

scaffold_77:46483-46633 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-18.3

Flybase annnotation

CDS [Dper\GL13144-cds]; exon [dper_GLEANR_13326:3]; intron [Dper\GL13144-in]

No Repeatable elements found

mature
star
  1. scaffold_167:32481-32505 -
  2. dpe_2084  scaffold_77:46546-46570 -
  3. scaffold_3:639958-639982 +
  4. scaffold_89:124885-124909 -
  5. scaffold_346:47982-48006 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TTTGAAAGGTGAAATCTGACGAAATGTTGTCAATGTAAGTGTCCCAAAATCATGTCCCTTCAAGTGCCGTCTCTAGCCGTAAGACAATTGTTTCTGGCCAATGAATCATTAGTTGGAGGAAAATGGAGGACCACCGCCCAAGTGTGAGGACGCCAAGGCAGGGTGAAAGCCATCGCTCGGCGGTCCTCTACGCTCAAGGAGGTCTACCCAGGAGCCCAGCTGGAGGCCGTCAAGTGCGAGGACATCCCCAA
*****************************************************************************************************************..(((....((((.....(((((((...((((....))))...)))..))))....))))..)))....********************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V057
head
 V042
embryo
..............................................................................................................................................................CAGGGTGAAAGCCATCGCTCGGCG..................................................................... 24 0 1 1.00 1 1 0 0
......................................................................................................................................................................................................................CCCAGCTGGAGGCCGTCAAGTG............... 22 0 1 1.00 1 1 0 0
............................................................................................................................................AGTTTGAGGACGCCAAGG............................................................................................. 18 1 1 1.00 1 1 0 0
....................................................................................................................................................................GAAAGCCATCGCTCGGCGGTCCTCTA............................................................. 26 0 1 1.00 1 1 0 0
.........................................................................................................................................CCAAGTGTGAGGACGCCAAGGC............................................................................................ 22 0 1 1.00 1 1 0 0
.........................................................................................................................................CCAAGTGTGAGGACGCCAAGGCAGGGT....................................................................................... 27 0 1 1.00 1 1 0 0
.........................................................................................................................................CCAAGTGTGAGGACGCCAAGGCAGGG........................................................................................ 26 0 1 1.00 1 1 0 0
..............................................................................................................................................................................................CGCTCAAGGAGGTCTACCCAGGA...................................... 23 0 20 0.85 17 17 0 0
....................................AAGGGTCCCAAACTCAAGTCC.................................................................................................................................................................................................. 21 3 2 0.50 1 0 1 0
......................................................................................................................................................................AAGCCATCGATGGGCGGTACT................................................................ 21 3 3 0.33 1 0 1 0
.................................................................................................................TGGAGGAAAATGGAGGACCACCGCC................................................................................................................. 25 0 5 0.20 1 1 0 0
..............................................................................................................................................................................................CGCTCAAGGAGGTCTACCCAGGAA..................................... 24 1 20 0.15 3 3 0 0
.................................................................................................................................................................................................TCAAGGAGGTCTACCCAGGAG..................................... 21 0 20 0.10 2 2 0 0
...........................................................................................................................TGGAGGACCACCGCCCAAGTGTGAGG...................................................................................................... 26 0 20 0.10 2 2 0 0
...........................................................................................................................TGGAGGACCACCGCCCAAGTGTGAA....................................................................................................... 25 1 20 0.05 1 1 0 0
..............................................................................................................................................................................................CGCTCAAGGAGGTCTACCCAGGAG..................................... 24 0 20 0.05 1 0 0 1
............................................................................................................................GGAGGACCACCGCCCAAGTGTGAG....................................................................................................... 24 0 20 0.05 1 1 0 0
..............................................................................................................................................................................................CGCTCAAGGAGGTCTACCCAGGAGCCC.................................. 27 0 20 0.05 1 1 0 0
...............................................................................................................................................................................................GCTCAAGGAGGTCTACCCAG........................................ 20 0 20 0.05 1 1 0 0

Anti-sense strand reads

AAACTTTCCACTTTAGACTGCTTTACAACAGTTACATTCACAGGGTTTTAGTACAGGGAAGTTCACGGCAGAGATCGGCATTCTGTTAACAAAGACCGGTTACTTAGTAATCAACCTCCTTTTACCTCCTGGTGGCGGGTTCACACTCCTGCGGTTCCGTCCCACTTTCGGTAGCGAGCCGCCAGGAGATGCGAGTTCCTCCAGATGGGTCCTCGGGTCGACCTCCGGCAGTTCACGCTCCTGTAGGGGTT
*********************************************************************..(((....((((.....(((((((...((((....))))...)))..))))....))))..)))....***************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V057
head
 V042
embryo
 V111
male body
.............................................................................................................................................................................................TGCGAGTTCCTCCAGATGGGT......................................... 21 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................GCCGCCAGGAGATGCGAGTTCCTCCAGAT............................................. 29 0 1 1.00 1 0 1 0 0 0
................................................................................................................................................................................AGCCGCCAGGAGATGCGAGTTCCT................................................... 24 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................................GAGCCGCCAGGAGATGCGAGTTCC.................................................... 24 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................TGCGAGTTCCTCCAGATGGGTCCT...................................... 24 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................................CCTCGGGTCGACCTCCGGCAGTTCAC............... 26 0 1 1.00 1 1 0 0 0 0
......................................................................................................................................................................................................................GGGTCGACCTCCGGCAGTTCA................ 21 0 1 1.00 1 1 0 0 0 0
...................GCTTTACAACAGTTACATTCACAGGGT............................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................GCCGCCAGGAGATGCGAGTTCCT................................................... 23 0 1 1.00 1 1 0 0 0 0
................................................................................................................................................................................AGACGCCAGGAGATGGGAGTTCCT................................................... 24 2 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................................................CGGGTCGACCTCCGGCAGTTCAC............... 23 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................CGAGCCGCCAGGAGATGGGAGTTCCT................................................... 26 1 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................CGAGCCGCCAGGAGATGCGAGTTCCT................................................... 26 0 1 1.00 1 1 0 0 0 0
.............TAGACTGCTTTACAACAGTTACATT..................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................TACCTCCTGGTGGCGGGTTCACACT........................................................................................................ 25 0 20 0.45 9 6 3 0 0 0
................................................................................................................................CTAGTGGCGGGTTCACACTCCT..................................................................................................... 22 1 20 0.40 8 7 0 0 1 0
..............................................................................................................................TCCTGGTGGCGGGTTCACACT........................................................................................................ 21 0 20 0.35 7 6 0 0 1 0
.............................................................................................................................CTCCTGGTGGCGGGTTCACACT........................................................................................................ 22 0 20 0.35 7 7 0 0 0 0
................................................................................................................................CTGGTGGCGGGTTCACACTCCT..................................................................................................... 22 0 20 0.30 6 4 0 0 2 0
.........................................................................................................................TTACCTCCTGGTGGCGGGTTCACACT........................................................................................................ 26 0 20 0.30 6 3 3 0 0 0
..........................................................................................................................TACCTCCTAGTGGCGGGTTCACACT........................................................................................................ 25 1 20 0.25 5 5 0 0 0 0
..............................................................................................................................TCCTAGTGGCGGGTTCACACT........................................................................................................ 21 1 20 0.25 5 5 0 0 0 0
.......................................................................................................................................................................................................................TGTCGACCTACGGCAGGTCACG.............. 22 3 4 0.25 1 0 0 1 0 0
.................................................................................................................................TAGTGGCGGGTTCACACTCCT..................................................................................................... 21 1 20 0.25 5 5 0 0 0 0
..................................................................................................................................................................................................GTTCCTCCAGATGGGTCCTCGGGT................................. 24 0 20 0.25 5 5 0 0 0 0
..................................................................................................................................GGTGGCGGGTTCACACTCCT..................................................................................................... 20 0 20 0.20 4 4 0 0 0 0
.............................................................................................................................CTCCTAGTGGCGGGTTCACACT........................................................................................................ 22 1 20 0.20 4 4 0 0 0 0
............................................................................................................................CCTCCTAGTGGCGGGTTCACACTCCT..................................................................................................... 26 1 20 0.20 4 4 0 0 0 0
..............................................................................................................TCAACCTCCTTTTACCTCCTGG....................................................................................................................... 22 0 5 0.20 1 1 0 0 0 0
...........................................................................................................................ACCTCCTAGTGGCGGGTTCACACTCCT..................................................................................................... 27 1 20 0.20 4 4 0 0 0 0
..............................................................................................................................................................................................GCGAGTTCCTCCAGATGGGTCCT...................................... 23 0 20 0.20 4 3 1 0 0 0
...........................................................................................................................ACCTCCTGGTGGCGGGTTCACACT........................................................................................................ 24 0 20 0.20 4 4 0 0 0 0
.............................................................................................................................CTCCTGGTGGCGGGTTCACACTCCT..................................................................................................... 25 0 20 0.20 4 4 0 0 0 0
...............................................................................................................................ACTAGTGGCGGGTTCACACT........................................................................................................ 20 2 20 0.15 3 3 0 0 0 0
...............................................................................................................................CCTAGTGGCGGGTTCACACTCCT..................................................................................................... 23 1 20 0.15 3 2 0 1 0 0
......................................................................................................................................................................................................CTCCAGATGGGTCCTCGGGT................................. 20 0 20 0.15 3 3 0 0 0 0
......................................................................................................................................................................................................CTCCAGATGGGTCCTCGGGTCGACC............................ 25 0 20 0.15 3 0 3 0 0 0
....................................................................................................................................................................................................TCCTCCAGATGGGTCCTCGGGTCGACCT........................... 28 0 20 0.15 3 2 1 0 0 0
..................................................................................................................................................................................................................CCTCGGGTCGACCTCCGGCACTTCACG.............. 27 1 9 0.11 1 1 0 0 0 0
......................................................................................................................................................................................................CTCCAGATGGGTCCTCGGGTCGACCT........................... 26 0 20 0.10 2 2 0 0 0 0
...............................................................................................................................ATTGGTGGCGGGTTCACACT........................................................................................................ 20 2 20 0.10 2 2 0 0 0 0
............................................................................................................................CCTCCTGGTGGCGGGTTCACACT........................................................................................................ 23 0 20 0.10 2 2 0 0 0 0
........................................................................................................................................................................................................CCAGATGGGTCCTCGGGTCGACC............................ 23 0 20 0.10 2 2 0 0 0 0
...............................................................................................................................CCTGGTGGCGGGTTCACACTCCT..................................................................................................... 23 0 20 0.10 2 2 0 0 0 0
.........................................................................................................................................................................................................CAGATGGGTCCTCGGGTCGACCT........................... 23 0 20 0.10 2 2 0 0 0 0
..............................................................................................................................................................................................GCGAGTTCCTCCAGATGGGT......................................... 20 0 20 0.10 2 2 0 0 0 0
..........................................................................................................................TACCTCCTAGTGGCGGGTTCACACTCCT..................................................................................................... 28 1 20 0.10 2 2 0 0 0 0
.............................................................................................................................CTCCTAGTGGCGGGTTCACACTCCT..................................................................................................... 25 1 20 0.10 2 0 0 0 2 0
................................................................................................................................................................................AGCCGCGAGGACATGCGAA........................................................ 19 3 12 0.08 1 0 0 1 0 0
...................................................................................................................................................................................CGCCAGGGGATGGGTGTTC..................................................... 19 3 15 0.07 1 0 0 1 0 0
.............................................................................................................................CTCCTAGTGGCGGGTTCACACTCC...................................................................................................... 24 1 20 0.05 1 1 0 0 0 0
.............................................................................................................................CTCCTGGTGGCGGGTTCACACTTCT..................................................................................................... 25 1 20 0.05 1 1 0 0 0 0
......................................................................................................................................................................................................CTCCAGATGGGTCCTCGAGTCGACCT........................... 26 1 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................................................CGAGTTCCTCCAGATGGGT......................................... 19 0 20 0.05 1 1 0 0 0 0
...................................................................................................................................GTGGCGGGTTCACACTCCTT.................................................................................................... 20 1 20 0.05 1 1 0 0 0 0
.................................................................................................................................................................................................AGTTCCTCCAGACGGGTCCTC..................................... 21 1 20 0.05 1 1 0 0 0 0
............................................................................................................................................................................................................TTGGGTCCTCGGGTCGACCT........................... 20 1 20 0.05 1 1 0 0 0 0
.................................................................................................................................TGGTGGCGGGTTCACACTCCT..................................................................................................... 21 0 20 0.05 1 1 0 0 0 0
................................................................................................................................................................................................GAGTTCCTCCAGATGGGTCCTCGGGT................................. 26 0 20 0.05 1 1 0 0 0 0
.............................................................................................................................CTCCTAGTGGCGGGTTCACACTC....................................................................................................... 23 1 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................................................AGATGGGTCCTCGGGTCGACCTCC......................... 24 0 20 0.05 1 1 0 0 0 0
.............................................................................................................................ATCCTGGTGGCGGGTTCACACT........................................................................................................ 22 1 20 0.05 1 1 0 0 0 0
................................................................................................................................CTGGTGGCGGGTTCACAC......................................................................................................... 18 0 20 0.05 1 1 0 0 0 0
............................................................................................................................CCTCCTAGTGGCGGGTTCACACT........................................................................................................ 23 1 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................................................CGAGTTCCTCCAGATGGGTCCT...................................... 22 0 20 0.05 1 0 1 0 0 0
...........................................................................................................................ACCTCCTGGTGGCGGGTTCACACTCCT..................................................................................................... 27 0 20 0.05 1 1 0 0 0 0
............................................................................................................................CCTCCTGGTGGCGGGTTCACACTCCG..................................................................................................... 26 1 20 0.05 1 1 0 0 0 0
...................................................................................................................................GTGGCGGGTTCACACTCCT..................................................................................................... 19 0 20 0.05 1 1 0 0 0 0
...................................................................................................................................................................................................CTCCTCCAGATGGGTCCTCGGGTCGAC............................. 27 1 20 0.05 1 0 0 0 0 1
.........................................................................................................................TTACCTCCTAGTGGCGGGTTCACAC......................................................................................................... 25 1 20 0.05 1 1 0 0 0 0
...................................................................................................................................GTGGCGGGTTCACACTCC...................................................................................................... 18 0 20 0.05 1 1 0 0 0 0
................................................................................................................................CTGGTGGCGGGTTCACACTCC...................................................................................................... 21 0 20 0.05 1 1 0 0 0 0
.......................................................................................................................................................................................AGGAGATGGGTGTTCCTCG................................................. 19 3 20 0.05 1 0 0 0 0 1
...............................................................................................................................CCTAGTGGCGGGTTCACACTCC...................................................................................................... 22 1 20 0.05 1 1 0 0 0 0
........................................................................................................................................................................................................ACAGATGGGTCCTCGGGT................................. 18 1 20 0.05 1 0 0 0 1 0
.........................................................................................................................................................................................................CAGATGGGTCCTCGAGTCGACCT........................... 23 1 20 0.05 1 1 0 0 0 0
...........................................................................................................................ACCTCCTGGTGGCGGGTTCACAC......................................................................................................... 23 0 20 0.05 1 1 0 0 0 0
................................................................................................................................................................................................GAGTTCCTCCAGATGGGTCCT...................................... 21 0 20 0.05 1 1 0 0 0 0
.................................................................................................................................................................................................AGTTCCTCCAGATGGGTCC....................................... 19 0 20 0.05 1 1 0 0 0 0
.................................................................................................................................TGGTGGCGGGTTCACACT........................................................................................................ 18 0 20 0.05 1 1 0 0 0 0
.........................................................................................................................................................................................................TAGATGGGTCCTCGGGTCGACCT........................... 23 1 20 0.05 1 1 0 0 0 0
...........................................................................................................................ACCTCCTAGTGGCGGGTTCACACT........................................................................................................ 24 1 20 0.05 1 1 0 0 0 0
.........................................................................................................................................................................................................AAGATGGGTCCTCGGGTCGACC............................ 22 1 20 0.05 1 1 0 0 0 0
............................................................................................................................................................................................................ATGGGTCCTCGGGTCGACCTCC......................... 22 0 20 0.05 1 1 0 0 0 0
.........................................................................................................................................................GTTCCGTCCCACCTTCGGTAG............................................................................. 21 1 20 0.05 1 1 0 0 0 0
.........................................................................................................................................................................................................AAAATGGGTCCTCGGGTCGACCT........................... 23 2 20 0.05 1 1 0 0 0 0
...............................................................................................................................ACTGGTGGCGGGTTCACACT........................................................................................................ 20 1 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................................................AGATGGGTCCTCGGGTCGACCT........................... 22 0 20 0.05 1 1 0 0 0 0
.........................................................................................................................TTACCTCCTAGTGGCGGGTTCACACTCCT..................................................................................................... 29 1 20 0.05 1 1 0 0 0 0
....................................................................................................................................................................................................TCCTCCAGATGGGTCCTCGGGT................................. 22 0 20 0.05 1 1 0 0 0 0
.............................................................................................................................TTCCTGGTGGCGGGTTCACACTCCT..................................................................................................... 25 1 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................................................AGAGGGTACCTCGGGTCGAC............................. 20 3 20 0.05 1 0 0 1 0 0
...............................................................................................................................................................................................CGAGTTCCTCCAGATGGGTCCTCGGGT................................. 27 0 20 0.05 1 1 0 0 0 0
.........................................................................................................................................................................................................ATGATGGGTCCTCGGGTCGACCT........................... 23 2 20 0.05 1 1 0 0 0 0
...............................................................................................................................CCTGGTGGCGGGTTCACACT........................................................................................................ 20 0 20 0.05 1 1 0 0 0 0
..........................................................................................................................TACCTCCTGGTGGCGGGTTCACAC......................................................................................................... 24 0 20 0.05 1 1 0 0 0 0
....................................................................................................................................................................................................TCCTCCAGATGGGTCCTCGGGTCGACC............................ 27 0 20 0.05 1 1 0 0 0 0
..................................................................................................................................................................................................GTTCCTCCAGATGGGTCCT...................................... 19 0 20 0.05 1 1 0 0 0 0
.....................................................................................................................................................................................................ACTCCAGATGGGTCCTCGGGTCGACCT........................... 27 1 20 0.05 1 1 0 0 0 0
..............................................................................................................................TCCTAGTGGCGGGTTAACACTCCT..................................................................................................... 24 2 20 0.05 1 1 0 0 0 0
..............................................................................................................................TCCTAGTGGCGGGTTCAC........................................................................................................... 18 1 20 0.05 1 1 0 0 0 0
...............................................................................................................................CCTGGTGGCGGGTTCACA.......................................................................................................... 18 0 20 0.05 1 1 0 0 0 0
.....................................................................................................................................................................................................CCTCCAGATGGGTCCTCGGGT................................. 21 0 20 0.05 1 1 0 0 0 0
............................................................................................................................................................................................................ATGGGTCCTCGGGTCGACCT........................... 20 0 20 0.05 1 0 0 0 0 1
...............................................................................................................................CCTAGTGGCGGGTTCACACT........................................................................................................ 20 1 20 0.05 1 1 0 0 0 0
.................................................................................................................................................................................................AGTTCCTCCAGATGGGTCCTCGGGT................................. 25 0 20 0.05 1 1 0 0 0 0
..........................................................................................................................TACCTCCTGGTGGCGGGTTCACACTCCT..................................................................................................... 28 0 20 0.05 1 1 0 0 0 0
....................................................................................................................................................................................................TCCTCCAGATGGGTCCTCGGGTCGAC............................. 26 0 20 0.05 1 1 0 0 0 0
.......................................................................................................................................................................................................TCCAGATGGGTCCTCGGGTCGACC............................ 24 0 20 0.05 1 1 0 0 0 0
...........................................................................................................................ACCTCCTGGTGGCGGGTTCACACG........................................................................................................ 24 1 20 0.05 1 1 0 0 0 0
................................................................................................................................CTAGTGGCGGGTTCACACT........................................................................................................ 19 1 20 0.05 1 1 0 0 0 0
..............................................................................................................................TCCTAGTGGCGGGTTCACAC......................................................................................................... 20 1 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_77:46433-46683 - dpe_2084 TTTGAAAGGTGAAATCTGACGAAATGTTGTCAATGTAAGTGTCCCAAAATCATGTCCCTTCAAGTGCCGTCT---------CTAGCCGTAAGACAA----TT---GTTTCTGGCCAATGAATCATTAGTTGGAGGAAAATGGAGGACCACCGCCCAAGTGTGAGGACGC----------CAAGGCAGGGTGAAAGCCATCG----------------CTCGGCGGTCCTCTAC-----------------GCTCAAGGAGGTCTACCCAGGAGCCCAGCTGGAGGCCGTCAAGTGCGAGGACATCCCCAA
dp5 Unknown_group_72:33810-34054 - CATGTCCCTCGGGG----------------------------------------------CAAGTGGCATCTAGTGGAAAACGAGCTTCAGGACCAGTTCCTACAAGAAC-------------------TGGAGGAGAATGGCGGACCACCGCCAAAGTGTGAGGACGCAGGGTGGCATTAAGGCAAGGTGAAAGCCATCGCCTGCCAAGAAGCTCGCTCTGCGGCCCTCTACATGAAGGCGGTAGATGCCCTCGTGGAGGTCTACCCAGGGGCCAAGCTGGAGGCCGTGAAATGGGAAGATGGCCCCAG
droMoj3 scaffold_6500:17457063-17457229 + G-----------------------------------------------------------------------------------------------------------------------------------------------GTCCACCACCTAGCTGCAAGGATGTCGGCTGGTATCAAGGCAACGTGAAAATCATATCATGCGATAGTCAACGATCTGTGGAACTCTACAAGAAGGCGGTTGCAAACGTTGGGGAGGTCTATCCTGGAGCTCAGCTGGTTGCCGTCGATTGGAGTGAGGTGCCGAG
droGri2 scaffold_15111:10614-10733 - G-----------------------------------------------------------------------------------------------------------------------------------------------GGTCACCACCGGTATGCAGGGATGCTGGGTGGTACCAGGGTGACACGAAGGTTATC-----------------------------------------------AGAGCTTGGTGAGGTCTACCCCGGGGCGAAGCTGGTCGCTTTCGACTGGAGCGAAGTCCCGAG
droAna3 scaffold_13339:1038285-1038479 + AGTGAATGAGGAGA-------------------------------------------------------------------------------------------------------------------TGCTCAAAAGCGGAGGACTTCCACCGGACTGCGAAGACGCAGGGTGGTACCAGGGTAGCATCAAGGTGATAGCGTGCCAAAATGCGAGGTCTGTAAGCCTCTACAAGCGAATGATTGCGTCGCTTGGAGAGGTCTACCCAGGAGCCAGACTGGAGGCGGTGGACTGGGACAAGATCCCCAG
droBip1 scf7180000392126:23265-23402 - AG-----------A-------------------------------------------------------------------------------------------------------------------TGCTGAAGAGCGGAGGACCCCCACCGGAATGTGAAGACACAG----GTATCAGGGTAGCGTCAAGGTGATAGCGTACA------------------------------------------AGCTTGGAGAAGTCTACCCTGGGGCAAGGGTGGAGGCGGTTGACTGAGCTCAGATTCCAAG
droEle1 scf7180000490714:63303-63482 - G----------------------------------------------------------------------------------------------------------------------------------GACAATAATCCAGGACCACTACCAGACTGTACCGACGCAGGTTGGTACCAAGGCAATCTCAAACTCATTGTCTGTGAGGACGAGCGGTCGGCAGTCCTTTACAAGGCTGCGATCGCAATGGTTGGTGAAGTTTACCCCGGAGCCAACCTGGATGTCTGCGCCTGCGCCGATATCCCGTC
droTak1 scf7180000414105:2014-2160 + GC-------------------------------------------------------------------------------------------------------------------------------TGGACAAAAACCCAGGACCGCTTTCTGACTGCACAGATGCAGGGTGAG------------------------------------AGAGATCGGCAGCGCTTTATAAGGCTGCCATCACCAAAGTTGGCGAGGTCTACCCCGGAGCCAAGCTGGCCGTCTGCGAGGCAGCGGATATCCCGTC
droEug1 scf7180000409462:453241-453251 - AATGATAAGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 v2_chrUn_001:378862-379069 - CCCTAGCCACAAAATGC-----------------------------------------------------------------------------------TTCGAGATTC-------------------TAGCCAAGGAACCTGGCCCCCCTCCTGTCTGCAAAGACGTGGGATGGTTCCAAGGCGGCGTCAAGGTGATCGCCTGTAACGATAAACGCTCTGCGGAGCTATACAAAGCCGCAGTAAAAGTGCCGGGGGAGGTGTATGAGGGCGCCGGACTTGTTGCGCTAAGGTGATTCGACGTACCTTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
TTTGAAAGGTGAAATCTGACGAAATGTTGTCAATGTAAGTGTCCCAAAATCATGTCCCTTCAAGTGCCGTCT---------CTAGCCGTAAGACAA----TT---GTTTCTGGCCAATGAATCATTAGTTGGAGGAAAATGGAGGACCACCGCCCAAGTGTGAGGACGC----------CAAGGCAGGGTGAAAGCCATCG----------------CTCGGCGGTCCTCTAC-----------------GCTCAAGGAGGTCTACCCAGGAGCCCAGCTGGAGGCCGTCAAGTGCGAGGACATCCCCAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................................................................................CAGGGTGAAAGCCATCG----------------CTCGGCG......................................................................................2411.001010000
.................................................................................................................................................................................................................................................................................CCCAGCTGGAGGCCGTCAAGTG...............2211.001010000
..............................................................................................................................................................................................GAAAGCCATCG----------------CTCGGCGGTCCTCTA..............................................................................2611.001010000
.........................................................................................................................................................CCAAGTGTGAGGACGC----------CAAGGC.............................................................................................................................2211.001010000
.........................................................................................................................................................CCAAGTGTGAGGACGC----------CAAGGCAGGGT........................................................................................................................2711.001010000
.........................................................................................................................................................CCAAGTGTGAGGACGC----------CAAGGCAGGG.........................................................................................................................2611.001010000
........................................................................................................................................................................................................................................C-----------------GCTCAAGGAGGTCTACCCAGGA......................................23200.85170170000
.................................................................................................................................TGGAGGAAAATGGAGGACCACCGCC............................................................................................................................................................2550.201010000
........................................................................................................................................................................................................................................C-----------------GCTCAAGGAGGTCTACCCAGGAA.....................................24200.153030000
............................................................................................................................................................................................................................................................TCAAGGAGGTCTACCCAGGAG.....................................21200.102020000
...........................................................................................................................................TGGAGGACCACCGCCCAAGTGTGAGG.................................................................................................................................................26200.102020000
...........................................................................................................................................TGGAGGACCACCGCCCAAGTGTGAA..................................................................................................................................................25200.051010000
........................................................................................................................................................................................................................................C-----------------GCTCAAGGAGGTCTACCCAGGAG.....................................24200.051001000
............................................................................................................................................GGAGGACCACCGCCCAAGTGTGAG..................................................................................................................................................24200.051010000
........................................................................................................................................................................................................................................C-----------------GCTCAAGGAGGTCTACCCAGGAGCCC..................................27200.051010000
..........................................................................................................................................................................................................................................................GCTCAAGGAGGTCTACCCAG........................................20200.051010000
dp5
CATGTCCCTCGGGG----------------------------------------------CAAGTGGCATCTAGTGGAAAACGAGCTTCAGGACCAGTTCCTACAAGAAC-------------------TGGAGGAGAATGGCGGACCACCGCCAAAGTGTGAGGACGCAGGGTGGCATTAAGGCAAGGTGAAAGCCATCGCCTGCCAAGAAGCTCGCTCTGCGGCCCTCTACATGAAGGCGGTAGATGCCCTCGTGGAGGTCTACCCAGGGGCCAAGCTGGAGGCCGTGAAATGGGAAGATGGCCCCAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................................................................................................................................................TGAGGACGCAGGGTGGCATT..................................................................................................................................20110.00100000000550
...............................................................................................................................................................GTGAGGACGCAGGGTGGCATT..................................................................................................................................2114.0040200000110
................................................................................................................................................................TGAGGACGCAGGGTGGCATTT.................................................................................................................................2113.0030100000020
.......................................................................................................................................................................................................................................................................TACCCAGGGGCCAAGCTGGAGGCCG......................2512.0020200000000
........................................................................................................................................................................................CAAGGTGAAAGCCATCGCCTG.........................................................................................................21201.853703700000000
........................................................................................................................................................................................CAAGGTGAAAGCCATCGCCTGC........................................................................................................22201.553103100000000
.........................................................................................................................................................CAAAGTGTGAGGACGCAGGGTGG......................................................................................................................................23201.452902800001000
..............................................................................................................................................................TGTGAGGACGCAGGGTGGCAT...................................................................................................................................21201.052100000002100
.........................................................................................................................................................CAAAGTGTGAGGACGCAGGGTG.......................................................................................................................................22201.052102100000000
.............G----------------------------------------------CAAGTGGCATCTAGTGGAAAACGAG.................................................................................................................................................................................................................................2611.0010100000000
...................................................................................................................................................................................................................................CTCTACATGAAGGCGGTAGATGCCC..........................................................2511.0010100000000
.............G----------------------------------------------CAAGTGGCATCTAGTGGAAAACGAGC................................................................................................................................................................................................................................2711.0010100000000
.............G----------------------------------------------CAAGTGGCATCTAGTGGAAAAC....................................................................................................................................................................................................................................2311.0010100000000
..............................................................................................CAGTTCCTACAAGAAC-------------------TGGAGG...............................................................................................................................................................................2211.0010100000000
.....................................................................................................TACAAGAAC-------------------TGGAGGAGAATGGCGG.....................................................................................................................................................................2511.0010000000100
............................................................................................................................................................AGTGTGAGGACGCAGGGTGGCATTT.................................................................................................................................2511.0010000000100
..............................................................................................................................................................TGTGAGGACGCAGGGTGGCATT..................................................................................................................................2211.0010000000100
.............G----------------------------------------------CAAGTGGCATCTAGTGGAAAACGA..................................................................................................................................................................................................................................2511.0010100000000
.............................................................................................................................................................................................................CCAAGAAGCTCGCTCTGCGGC....................................................................................2111.0010100000000
..........................................................................TGGAAAACGAGCTTCAGGACC.......................................................................................................................................................................................................................2111.0010000000100
........................................................................................................AAGAAC-------------------TGGAGGAGAATGGCGG.....................................................................................................................................................................2231.0030000000300
.......................................................................................TCAGGACCAGTTCCTACAAGA..........................................................................................................................................................................................................2111.0010100000000
.........................................................................................................................................................CAAAGTGTGAGGACGCAGGGT........................................................................................................................................21200.801601500001000
........................................................................................................AAGAAC-------------------TGGAGGAGAATGGCGGAC...................................................................................................................................................................2430.6720000000200
........................................................................................................................................................................................CAAGGTGAAAGCCATCGCCTGCCA......................................................................................................24200.601201101000000
.........................................................................................................................................................CAAAGTGTGAGGACGCAGGG.........................................................................................................................................20200.551101000000010
.........................................................................................................AGAAC-------------------TGGAGGAGAATGGCGG.....................................................................................................................................................................2140.5020000000200
........................................................................................................................................................................................CAAGGTGAAAGCCATCGCCTGCCAAGAA..................................................................................................2820.5010100000000
..............................................................................................................................................................TGTGAGGACGCAGGGTGGC.....................................................................................................................................19200.4590200000070
..............................................................................................................................................................TGTGAGGACGCAGGGTGGCA....................................................................................................................................20200.3570000000700
...........................................................................................................................................................AAGTGTGAGGACGCAGGGTG.......................................................................................................................................20200.3060600000000
..........................................................................................................................................................................................................................TCTGCGGCCCTCTACATGAAGGCGG...................................................................25180.2850200000210
....................................................................................................................................................ACCGCCAAAGTGTGAGGACGC.............................................................................................................................................21200.2550500000000
...........................................................................................................................................................................................................................CTGCGGCCCTCTACATGAAGG......................................................................21200.2040200000200
................................................................................................................................................................TGAGGACGCAGGGTGGCATA..................................................................................................................................20200.2040000000400
........................................................................................................................................................................................CAAGGTGAAAGCCATCGCC...........................................................................................................19200.2040400000000
...................................................................................................................................................CACCGCCAAAGTGTGAGGACGCAGGG.........................................................................................................................................26200.2040400000000
......................................................................................................................................................................................................................TCGCTCTGCGGCCCTCTACATGAAGGCGG...................................................................29160.1930000000300
......................................................................................................................................................................................................................TCGCTCTGCGGCCCTCTACATGA.........................................................................23170.1830300000000
......................................................................................................................................................................................................................TCGCTCTGCGGCCCTCTACATGAAG.......................................................................25170.1830300000000
....................................................................................................................................................................................................................GCTCGCTCTGCGGCCCTCTA..............................................................................20180.1730300000000
...........................................................................................................................................................AAGTGTGAGGACGCAGGGT........................................................................................................................................19200.1530200000100
...........................................................................................................................................................AAGTGTGAGGACGCAGGGTGG......................................................................................................................................21200.1530300000000
..........................................................................................................................................................AAAGTGTGAGGACGCAGGGTGG......................................................................................................................................22200.1530300000000
.....................................................................................................................................................CCGCCAAAGTGTGAGGACGCA............................................................................................................................................21200.1530300000000
.....................................................................................................................................................................................................................CTCGCTCTGCGGCCCTCTAC.............................................................................20200.1530000000300
.............................................................................................................................................................GTGTGAGGACGCAGGGTGG......................................................................................................................................19200.1530300000000
....................................................................................................................................................ACCGCCAAAGTGTGAGGACG..............................................................................................................................................20200.1530300000000
............................................................................................................................................................AGTGTGAGGACGCAGGGTGGC.....................................................................................................................................21200.1530000000300
.....................................................................................................................................................................................................................CTCGCTCTGCGGCCCTCTACATG..........................................................................23170.1220200000000
......................................................................................................................................................................................................................TCGCTCTGCGGCCCTCTACATGAAGG......................................................................26170.1220200000000
.............................................................................................................................................................GTGTGAGGACGCAGGGTGGCA....................................................................................................................................21200.1020100000010
..........................................................................................................................................................AAAGTGTGAGGACGCAGGGTG.......................................................................................................................................21200.1020200000000
......................................................................................................................................................CGCCAAAGTGTGAGGACGCAGG..........................................................................................................................................22200.1020200000000
..................................................................................................................................................CCACCGCCAAAGTGTGAGGAC...............................................................................................................................................21200.1020200000000
............................................................................................................................................................................................GTGAAAGCCATCGCCTGCCAA.....................................................................................................21200.1020200000000
.................................................................................................................................................ACCACCGCCAAAGTGTGAGGACG..............................................................................................................................................23200.1020100000010
............................................................................................................................................................AGTGTGAGGACGCAGGGTG.......................................................................................................................................19200.1020200000000
.........................................................................................................................................................CAAAGTGTGAGGACGCAGGGTGGCAT...................................................................................................................................26200.1020000000020
.........................................................................................................................................................................................................................CTCTGCGGCCCTCTACATGA.........................................................................20200.1020200000000
......................................................................................................................................................CGCCAAAGTGTGAGGACGCA............................................................................................................................................20200.1020200000000
.........................................................................................................................................................CAAAGTGTGAGGACGCAGGGTGGGG....................................................................................................................................25200.1020200000000
................................................................................................................................................................TGAGGACGCAGGGTGGCA....................................................................................................................................18200.1020000000200
......................................................................................................................................................................................................................TCGCTCTGCGGCCCTCTACATGAAGGCG....................................................................28160.0610100000000
.....................................................................................................................................................................................................................CTCGCTCTGCGGCCCTCTACATGAAGGCGG...................................................................30160.0610000000100
.....................................................................................................................................................................................................................CTCGCTCTGCGGCCCTCTACATGAAG.......................................................................26170.0610100000000
......................................................................................................................................................................................................................TCGCTCTGCGGCCCTCTACATG..........................................................................22170.0610100000000
..............................................................................................................................................................................................................................CGGCCCTCTACATGAAGGCGG...................................................................21180.0610100000000
............................................................................................................................................................................................................................TGCGGCCCTCTACATGAAGGCGGT..................................................................24180.0610100000000
.....................................................................................................................................................................................................................CTCGCTCTGCGGCCCTCTACAT...........................................................................22190.0510100000000
......................................................................................................................................................................................................................TCGCTCTGCGGCCCTCTACA............................................................................20190.0510100000000
...........................................................................................................................................................................................GGTGAAAGCCATCGCCTGCC.......................................................................................................20200.0510100000000
.............................................................................................................................................................GTGTGAGGACGCAGGGTGGCAT...................................................................................................................................22200.0510000000010
.........................................................................................................................................................................................AAGGTGAAAGCCATCGCC...........................................................................................................18200.0510100000000
.........................................................................................................................................................................................AAGGTGAAAGCCATCGCCTGCC.......................................................................................................22200.0510100000000
...............................................................................................................................................................GTGAGGACGCAGGGTGGCA....................................................................................................................................19200.0510000000100
............................................................................................................................................................AGTGTGAGGACGCAGGGTGGT.....................................................................................................................................21200.0510000000010
......................................................................................................................................................................................................................TCGCTCTGCGGCCCTCTAC.............................................................................19200.0510100000000
...................................................................................................................................................CACCGCCAAAGTGTGAGGACGC.............................................................................................................................................22200.0510100000000
..........................................................................................................................................................................................................................TCTGCGGCCCTCTACATGAAGGC.....................................................................23200.0510100000000
........................................................................................................................................................CCAAAGTGTGAGGACGCAGGGTG.......................................................................................................................................23200.0510100000000
.............................................................................................................................................................................................................................GCGGCCCTCTACATGAAGGCG....................................................................21200.0510100000000
.........................................................................................................................................................................................AAGGTGAAAGCCATCGCCTG.........................................................................................................20200.0510100000000
...............................................................................................................................................................GTGAGGACGCAGGGTGGC.....................................................................................................................................18200.0510100000000
.........................................................................................................................................................................................AAGGTGAAAGCCATCGCCTGCCAAG....................................................................................................25200.0510100000000
..........................................................................................................................................................................................AGGTGAAAGCCATCGCCTG.........................................................................................................19200.0510100000000
..............................................................................................................................................CGGACCACCGCCAAAGTGTGAGGAC...............................................................................................................................................25200.0510100000000
........................................................................................................................................................................................CAAGGTGAAAGCCATCGCCTGCCAAG....................................................................................................26200.0510010000000
...........................................................................................................................................................AAGTGTGAGGACGCAGGGTGT......................................................................................................................................21200.0510100000000
..........................................................................................................................................................................................AGGTGAAAGCCATCGCCTGCC.......................................................................................................21200.0510100000000
.....................................................................................................................................................CCGCCAAAGTGTGAGGACGCAGGG.........................................................................................................................................24200.0510100000000
.........................................................................................................................................................................................AAGGTGAAAGCCATCGCCTGCCAA.....................................................................................................24200.0510100000000
........................................................................................................................................................................................CAAGGTGAAAGCCATCGCCTGCC.......................................................................................................23200.0510010000000
..............................................................................................................................................................TGTGAGGACGCAGGGTGT......................................................................................................................................18200.0510100000000
............................................................................................................................................................................................................................TGCGGCCCTCTACATGAAGGC.....................................................................21200.0510100000000
.................................................................................................................................................................GAGGACGCAGGGTGGCAT...................................................................................................................................18200.0510000000010
.................................................................................................................................................ACCACCGCCAAAGTGTGAGGACGC.............................................................................................................................................24200.0510100000000
..........................................................................................................................................................AAAGTGTGAGGACGCAGG..........................................................................................................................................18200.0510000001000
.......................................................................................................................................................................................................................CGCTCTGCGGCCCTCTACA............................................................................19200.0510100000000
..........................................................................................................................................................................................................................TCTGCGGCCCTCTACATGA.........................................................................19200.0510100000000
droMoj3
G-----------------------------------------------------------------------------------------------------------------------------------------------GTCCACCACCTAGCTGCAAGGATGTCGGCTGGTATCAAGGCAACGTGAAAATCATATCATGCGATAGTCAACGATCTGTGGAACTCTACAAGAAGGCGGTTGCAAACGTTGGGGAGGTCTATCCTGGAGCTCAGCTGGTTGCCGTCGATTGGAGTGAGGTGCCGAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
G-----------------------------------------------------------------------------------------------------------------------------------------------GGTCACCACCGGTATGCAGGGATGCTGGGTGGTACCAGGGTGACACGAAGGTTATC-----------------------------------------------AGAGCTTGGTGAGGTCTACCCCGGGGCGAAGCTGGTCGCTTTCGACTGGAGCGAAGTCCCGAGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.......................................................................................................................................................................................................................................................................TACCCCGGGGCGAAGCTGGT...........................20200.05101
droAna3
AGTGAATGAGGAGA-------------------------------------------------------------------------------------------------------------------TGCTCAAAAGCGGAGGACTTCCACCGGACTGCGAAGACGCAGGGTGGTACCAGGGTAGCATCAAGGTGATAGCGTGCCAAAATGCGAGGTCTGTAAGCCTCTACAAGCGAATGATTGCGTCGCTTGGAGAGGTCTACCCAGGAGCCAGACTGGAGGCGGTGGACTGGGACAAGATCCCCAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................................................................................................................................................................................................................................................TACCCAGGAGCCAGACTGGAGGCGGTG....................27200.60121200000
................................................................................................................................................GACTTCCACCGGACTGCGAAGACG..............................................................................................................................................2420.501001000
...........................................................................................................................................................................................................................................GCGAATGATTGCGTCGCTTGG......................................................21200.408800000
....................................................................................................................................................TCCACCGGACTGCGAAGACGCAGG..........................................................................................................................................24200.357160000
.......................................................................................................................................................................................................................................................................TACCCAGGAGCCAGACTGGAGGCGGT.....................26200.306060000
.......................................................................................................................................................................................................................................................GTCGCTTGGAGAGGTCTACCCAGG.......................................24150.203111000
......................................................................................................................................................................................................................GAGGTCTGTAAGCCTCTACAAGC.........................................................................23200.204400000
....................................................................................................................................................................................................GATAGCGTGCCAAAATGCGAGGTC..........................................................................................2450.201100000
.....................................................................................................................................................................................................ATAGCGTGCCAAAATGCGAGGTC..........................................................................................2350.201100000
...................................................................................................................................................................................................TGATAGCGTGCCAAAATGCGAG.............................................................................................2250.201001000
...........................................................................................................................................................................................................................................GCGAATGATTGCGTCGCTTGGAGA...................................................24160.193300000
................................................................................................................................................................................TACCAGGGTAGCATCAAGGTGAT...............................................................................................................23200.153300000
.........................................................................................................................................................................................................................................AAGCGAATGATTGCGTCGCTTGG......................................................23200.153100002
.......................................................................................................................................................................................GTAGCATCAAGGTGATAGCGTGC........................................................................................................23200.153003000
.....................................................................................................................................................................................................................................................................TCTACCCAGGAGCCAGACTGGAGGCGG......................27200.153300000
.......................................................................................................................................................................................................................................................GTCGCTTGGAGAGGTCTACCCAGGAGC....................................27150.132200000
.......................................................................................................................................................................................................................................................GTCGCTTGGAGAGGTCTACCCA.........................................22150.132200000
........................................................................................................................................................................................................................................................TCGCTTGGAGAGGTCTACCCAGGAG.....................................25150.132200000
.................................................................................................................................................................................................................................................................................CCAGACTGGAGGCGGTGGACT................21200.102200000
........................................................................................................................................................................................................................................................................ACCCAGGAGCCAGACTGGAGGCGGT.....................25200.102200000
................................................................................................................................................................................TACCAGGGTAGCATCAAGG...................................................................................................................19200.102200000
.................................................................................................................................................................................................................................GCCTCTACAAGCGAATGATTGCGTCGCT.........................................................28200.102020000
..........................................................................................................................................................................................................................................AGCGAATGATTGCGTCGCTTGG......................................................22200.102200000
.................................................................................................................................................................................................................................................................................CCAGACTGGAGGCGGTGGACTGG..............23200.102200000
...............................................................................................................................................................................................................................................................................AGCCAGACTGGAGGCGGTGG...................20200.102200000
...........................................................................................................................................................................................................................................GCGAATGATTGCGTCGCTTGGAGAGGTC...............................................28130.081100000
.......................................................................................................................................................................................................................................................GTCGCTTGGAGAGGTCTACCC..........................................21150.071010000
....................................................................................................................................................................................................................................................TGCGTCGCTTGGAGAGGTCTACCC..........................................24150.071100000
..................................................................................................................................................................................................................................................ATTGCGTCGCTTGGAGAGGTCTACC...........................................25150.071100000
.......................................................................................................................................................................................................................................................GTCGCTTGGAGAGGTCTACCCAGGAG.....................................26150.071100000
...............................................................................................................................................................................................................................................................GAGAGGTCTACCCAGGAGCCAGACTG.............................26150.071100000
...............................................................................................................................................................................................................................................................GAGAGGTCTACCCAGGAGCCAGAC...............................24160.061100000
.....................................................................................................................................................................................................................................................GCGTCGCTTGGAGAGGTCTA.............................................20160.061100000
...........................................................................................................................................................................................................................................GCGAATGATTGCGTCGCTTGGAGAGGT................................................27160.061100000
...........................................................................................................................................................................................................................................GCGAATGATTGCGTCGCTTGGAG....................................................23160.061100000
...........................................................................................................................................................................................................................................GCGAATGATTGCGTCGCTTGGAGAGG.................................................26160.061100000
..............................................................................................................................................................................................................................................AATGATTGCGTCGCTTGGAGA...................................................21160.061100000
..................................................................................................................................................................................................................................................ATTGCGTCGCTTGGAGAGGTC...............................................21160.061000100
..............................................................................................................................................................TGCGAAGACGCAGGGTGGTACCA.................................................................................................................................23200.051010000
...................................................................................................................................................................................................................................CTCTACAAGCGAATGATTGC...............................................................20200.051001000
.......................................................................................................................................................................................................................AGGTCTGTAAGCCTCTACAAGCGAA......................................................................25200.051100000
.........................................................................................................................................................................................AGCATCAAGGTGATAGCGTGCC.......................................................................................................22200.051000001
................................................................................................................................................................CGAAGACGCAGGGTGGTACCAGG...............................................................................................................................23200.051100000
...............................................................................................................................................................................................................................................ATGATTGCGTCGCTTGGAGAG..................................................21200.051010000
................................................................................................................................................................................TACCAGGGTAGCATCAAGGTGATAG.............................................................................................................25200.051001000
..........................................................................................................................................................................................GCATCAAGGTGATAGCGTGCCA......................................................................................................22200.051100000
..........................................................................................................................................................GGACTGCGAAGACGCAGGGTGG......................................................................................................................................22200.051100000
......................................................................................................................................................................................................................................................................CTACCCAGGAGCCAGACTGGAC..........................22200.051010000
.....................................................................................................................................................................ACGCAGGGTGGTACCAGGGTAGC..........................................................................................................................23200.051100000
.............................................................................................................................................................................TGGTACCAGGGTAGCATCAAGGTGA................................................................................................................25200.051010000
.....................................................................................................................................................................................................................................................................TCTACCCAGGAGCCAGACTGGAGG.........................24200.051100000
......................................................................................................................................................CACCGGACTGCGAAGACGCAGGG.........................................................................................................................................23200.051100000
.....................................................................................................................................................................................................................................................................TCTACCCAGGAGCCAGACTGGAGGC........................25200.051100000
..................................................................................................................................................................................................................................CCTCTACAAGCGAATGATTGCGTCGC..........................................................26200.051001000
......................................................................................................................................................................................GGTAGCATCAAGGTGATAGCGTG.........................................................................................................23200.051100000
............................................................................................................................................................ACTGCGAAGACGCAGGGTGGTACCAG................................................................................................................................26200.051100000
......................................................................................................................................................................................................................................................................CTACCCAGGAGCCAGACTGGAGGCGG......................26200.051100000
........................................................................................................................................................................................................................................................................ACCCAGGAGCCAGACTGGAGGCGG......................24200.051100000
........................................................................................................................................................................CAGGGTGGTACCAGGGTAG...........................................................................................................................19200.051100000
.................................................................................................................................................................................................................................................................................CCAGACTGGAGGCGGTGGA..................19200.051100000
...................................................................................................................................................................................................................................CTCTACAAGCGAATGATTGCGTCGCT.........................................................26200.051010000
..........................................................................................................................................................................GGGTGGTACCAGGGTAGCATCAAGG...................................................................................................................25200.051001000
................................................................................................................................................................................TACCAGGGTAGCATCAAGGTGATAGC............................................................................................................26200.051001000
...........................................................................................................................................................................................CATCAAGGTGATAGCGTGCCA......................................................................................................21200.051100000
................................................................................................................................................................................TACCAGGGTAGCATCAAGGTGATAGCGT..........................................................................................................28200.051010000
.....................................................................................................................................................................................................................................................................TCTACCCAGGAGCCAGACTGGAGGCGGT.....................28200.051010000
droBip1
AG-----------A-------------------------------------------------------------------------------------------------------------------TGCTGAAGAGCGGAGGACCCCCACCGGAATGTGAAGACACAG----GTATCAGGGTAGCGTCAAGGTGATAGCGTACA------------------------------------------AGCTTGGAGAAGTCTACCCTGGGGCAAGGGTGGAGGCGGTTGACTGAGCTCAGATTCCAAGSizeHit CountTotal NormTotal
No Reads
droEle1
G----------------------------------------------------------------------------------------------------------------------------------GACAATAATCCAGGACCACTACCAGACTGTACCGACGCAGGTTGGTACCAAGGCAATCTCAAACTCATTGTCTGTGAGGACGAGCGGTCGGCAGTCCTTTACAAGGCTGCGATCGCAATGGTTGGTGAAGTTTACCCCGGAGCCAACCTGGATGTCTGCGCCTGCGCCGATATCCCGTCSizeHit CountTotal NormTotal
No Reads
droTak1
GC-------------------------------------------------------------------------------------------------------------------------------TGGACAAAAACCCAGGACCGCTTTCTGACTGCACAGATGCAGGGTGAG------------------------------------AGAGATCGGCAGCGCTTTATAAGGCTGCCATCACCAAAGTTGGCGAGGTCTACCCCGGAGCCAAGCTGGCCGTCTGCGAGGCAGCGGATATCCCGTCSizeHit CountTotal NormTotal
No Reads
droEug1
AATGATAAGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droYak3
CCCTAGCCACAAAATGC-----------------------------------------------------------------------------------TTCGAGATTC-------------------TAGCCAAGGAACCTGGCCCCCCTCCTGTCTGCAAAGACGTGGGATGGTTCCAAGGCGGCGTCAAGGTGATCGCCTGTAACGATAAACGCTCTGCGGAGCTATACAAAGCCGCAGTAAAAGTGCCGGGGGAGGTGTATGAGGGCGCCGGACTTGTTGCGCTAAGGTGATTCGACGTACCTTGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............TGC-----------------------------------------------------------------------------------TTCGAGATTC-------------------TAGCCAAGGAACC........................................................................................................................................................................26102.6026010000000025
..............TGC-----------------------------------------------------------------------------------TTCGAGATTC-------------------TAGCCAAGGAAC.........................................................................................................................................................................25111.4516000000000016
......................................................................................................................................................................................................TCGCCTGTAACGATAAACGCTCTGCGG.....................................................................................2711.00101000000000
....................................................................................................TTCGAGATTC-------------------TAGCCAAGGAACC........................................................................................................................................................................23100.90906300000000
............AATGC-----------------------------------------------------------------------------------TTCGAGATTC-------------------TAGCCAAGGA...........................................................................................................................................................................25100.70700000000007
....................................................................................................TTCGAGATTC-------------------TAGCCAAGGAACCTG......................................................................................................................................................................2590.56505000000000
......................................................................................................CGAGATTC-------------------TAGCCAAGGAACCTGGC....................................................................................................................................................................2570.43303000000000
.......................................................................................................................................................TCCTGTCTGCAAAGACGTGGGATGG......................................................................................................................................25200.35700000000007
............................................................................................................................................................................ATGGTTCCAAGGCGGCGTCAAG....................................................................................................................22200.35706001000000
....................................................................................................TTCGAGATTC-------------------TAGCCAAGGAACCT.......................................................................................................................................................................2490.33302100000000
............................................................................................................................................................................ATGGTTCCAAGGCGGCGTCAAGG...................................................................................................................23200.30606000000000
..............TGC-----------------------------------------------------------------------------------TTCGAGATTC-------------------TAGCCAAGGAAT.........................................................................................................................................................................25110.27300000000003
......................................................................................................CGAGATTC-------------------TAGCCAAGGAACCTGGCCC..................................................................................................................................................................2760.17101000000000
............................................................................................................................................................................ATGGTTCCAAGGCGGCGTCAAGGT..................................................................................................................24200.15303000000000
....................................................................................................TTCGAGATTC-------------------TAGCCAAGGAACCTGGC....................................................................................................................................................................2770.14101000000000
......................................................................................................CGAGATTC-------------------TAGCCAAGGAACCTGGCC...................................................................................................................................................................2670.14101000000000
......................................................................................................CGAGATTC-------------------TAGCCAAGGAACCTGG.....................................................................................................................................................................2480.13101000000000
....................................................................................................TTCGAGATTC-------------------TAGCCAAGGAACCTGA.....................................................................................................................................................................2690.11101000000000
......................................................................................................CGAGATTC-------------------TAGCCAAGGAACCT.......................................................................................................................................................................2290.11101000000000
......................................................................................................CGAGATTC-------------------TAGCCAAGGAACCTG......................................................................................................................................................................2390.11101000000000
............AATGC-----------------------------------------------------------------------------------TTCGAGATTC-------------------TAGCCAAGGAACC........................................................................................................................................................................2890.11101000000000
..............TGC-----------------------------------------------------------------------------------TTCGAGATTC-------------------TAGCCAAGGAACT........................................................................................................................................................................26110.09101000000000
............................................................................................................................................................................ATGGTTCCAAGGCGGCGTCAAGGTG.................................................................................................................25150.07101000000000
............................................................................................................................................................................ATGGTTCCAAGGCGGCGTCA......................................................................................................................20200.05101000000000
............................................................................................................................................................................ATGGTTCCAAGGCGGCGTCAAGA...................................................................................................................23200.05101000000000
..............................................................................................................................................................TGCAAAGACGTGGGATGGTTCCAAG...............................................................................................................................25200.05100100000000
...........................................................................................................................................................................GATGGTTCCAAGGCGGCGTCAAG....................................................................................................................23200.05101000000000
...........................................................................................................................................................................GATGGTTCCAAGGCGGCGTCAAGG...................................................................................................................24200.05100000010000
.............................................................................................................................................................................TGGTTCCAAGGCGGCGTCAAGG...................................................................................................................22200.05101000000000
............................................................................................................................................................................ATGGTTCCAAGGCGGCGTCAA.....................................................................................................................21200.05101000000000
..........................................................................................................................................................TGTCTGCAAAGACGTGGGATGGTTCC..................................................................................................................................26200.05101000000000

Generated: 06/08/2015 at 05:10 PM