ID:dpe_208 |
Coordinate:scaffold_1904:4301-4375 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in alignment | mismatch in read |
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| -29.7 |
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Antisense to CDS [Dper\GL15280-cds]; Antisense to exon [dper_GLEANR_16251:1]
No Repeatable elements found
| mature | star |
|
TTCGCCTCGTGTGCGCGTTTTCTCCGCGGCGCCGGCTCCCAGCTCACCAATTCCAGATCACTTCCCGCCTCGGTGTACCCCGGCGATACCACCGGGGACACCGTCGGTCCCATGGATCCCGCGGTTGACACTAGCGGTGAGGCCAATAACTGTAGCTCCGAGAGACCTACTCCTA
***********************************....................((((.......(((.((((((.((((((........))))))))))))..)))......))))....***************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M042 female body |
M021 embryo |
V042 embryo |
V057 head |
V050 head |
|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................TTCCAGATCACTTCCCGCCTCGGTG.................................................................................................... | 25 | 0 | 1 | 7.00 | 7 | 0 | 5 | 2 | 0 | 0 |
| ..................................................................................GCGATACCACCGGGGACACCGTCGG.................................................................... | 25 | 0 | 7 | 4.57 | 32 | 32 | 0 | 0 | 0 | 0 |
| ...................................................TCCAGATCGCTTCCCGCCTCGGTG.................................................................................................... | 24 | 1 | 2 | 4.00 | 8 | 6 | 2 | 0 | 0 | 0 |
| ..................................................................................GCGATACCACCGGGGACACCGTCGGT................................................................... | 26 | 0 | 7 | 2.00 | 14 | 14 | 0 | 0 | 0 | 0 |
| ..................................................................................GCGATACCACCGGGGACACCGTCG..................................................................... | 24 | 0 | 8 | 1.63 | 13 | 13 | 0 | 0 | 0 | 0 |
| ..................................................TTCCAGATCACTTCCCGCCTCGGTGCA.................................................................................................. | 27 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 |
| ..................................................TTCCAGATCACTTCCCGCCTCGGT..................................................................................................... | 24 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 |
| ..............GCGTTTCCTCCGCGGCGCCGGCT.......................................................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 |
| ..................................................TTCCAGATCACTTCCCGCCTCGG...................................................................................................... | 23 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 |
| ......................................................................................TACCACCGGGGACACCGTCGG.................................................................... | 21 | 0 | 8 | 0.75 | 6 | 6 | 0 | 0 | 0 | 0 |
| ......................................................................................TACCACCGGGGACACCGTCGGTCCCA............................................................... | 26 | 0 | 7 | 0.57 | 4 | 4 | 0 | 0 | 0 | 0 |
| ..................................................TTCCAGATCGCTTCCCGCCTCGGTG.................................................................................................... | 25 | 1 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 |
| ...................................................TCCAGATCGCTTCCCGCCTCGGT..................................................................................................... | 23 | 1 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 |
| ...................................................TCCAGATCGCTTCCCGCCTCGGTGG................................................................................................... | 25 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 |
| ..................................................................................GCGATACCACCGGGGACACCGT....................................................................... | 22 | 0 | 8 | 0.50 | 4 | 4 | 0 | 0 | 0 | 0 |
| ..................................................................................GCGATACCACCGGGGACACCGTC...................................................................... | 23 | 0 | 8 | 0.50 | 4 | 4 | 0 | 0 | 0 | 0 |
| ....................................................CCAGATCGCTTCCCGCCTCGGTG.................................................................................................... | 23 | 1 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 |
| ...................................................TCCAGATCGCTTCCCGCCTCGG...................................................................................................... | 22 | 1 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 |
| ......................................................................................TACCACCGGGGACACCGTCGGTCC................................................................. | 24 | 0 | 7 | 0.43 | 3 | 3 | 0 | 0 | 0 | 0 |
| .....CTCGTGTGCGCGTTTCCTCCGC.................................................................................................................................................... | 22 | 1 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 | 0 |
| ......................................................................................TACCACCGGGGACACCGTCGGTCCC................................................................ | 25 | 0 | 7 | 0.29 | 2 | 2 | 0 | 0 | 0 | 0 |
| ...................................................................................CGATACCACCGGGGACACCGTCGG.................................................................... | 24 | 0 | 7 | 0.29 | 2 | 2 | 0 | 0 | 0 | 0 |
| ..................................................................................GCGATACCACCGGGGACACCGTCGGTC.................................................................. | 27 | 0 | 7 | 0.29 | 2 | 2 | 0 | 0 | 0 | 0 |
| ...................................................TCCAGATCACTTACCGCCTCGGTG.................................................................................................... | 24 | 1 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 |
| ......................................................................................TACCACCGGGGACACCGTCGGT................................................................... | 22 | 0 | 8 | 0.25 | 2 | 2 | 0 | 0 | 0 | 0 |
| ...................................................................................CGATACCACCGGGGACACCGTC...................................................................... | 22 | 0 | 8 | 0.25 | 2 | 2 | 0 | 0 | 0 | 0 |
| ......................................................................................TACCACCGGGGACACCGTCG..................................................................... | 20 | 0 | 9 | 0.22 | 2 | 2 | 0 | 0 | 0 | 0 |
| ..................................................................................GCGATACCACCGGGGACACCG........................................................................ | 21 | 0 | 9 | 0.22 | 2 | 2 | 0 | 0 | 0 | 0 |
| ..................TTTCTCCGGGGCGCCGGCTCCCAGC.................................................................................................................................... | 25 | 1 | 11 | 0.18 | 2 | 2 | 0 | 0 | 0 | 0 |
| ..................TTTCTCCGGGGCGCCGGCTCCCAG..................................................................................................................................... | 24 | 1 | 11 | 0.18 | 2 | 2 | 0 | 0 | 0 | 0 |
| ..................TTTCTCCGGGGCGCCGGCTC......................................................................................................................................... | 20 | 1 | 12 | 0.17 | 2 | 2 | 0 | 0 | 0 | 0 |
| ...........................................................................TACCCCGGCGATACCACCGGGGACA........................................................................... | 25 | 0 | 13 | 0.15 | 2 | 2 | 0 | 0 | 0 | 0 |
| ..................................................................................GCGATACCTCCGGGGACACCGTCGGTC.................................................................. | 27 | 1 | 7 | 0.14 | 1 | 1 | 0 | 0 | 0 | 0 |
| .......................................................................................ACCACCGGGGACACCGTCGGTCCCAT.............................................................. | 26 | 0 | 7 | 0.14 | 1 | 1 | 0 | 0 | 0 | 0 |
| ................................................................................................GACACCGTCGGTCCCATGGATCCCAC..................................................... | 26 | 1 | 7 | 0.14 | 1 | 1 | 0 | 0 | 0 | 0 |
| ........................................................................................CCACCGGGGACACCGTCGGTCCCAT.............................................................. | 25 | 0 | 7 | 0.14 | 1 | 1 | 0 | 0 | 0 | 0 |
| ..................................................................................GCGATACCACCGCGGACACCGTCGG.................................................................... | 25 | 1 | 7 | 0.14 | 1 | 0 | 0 | 0 | 1 | 0 |
| ...........................................................................................................TCCCATGGATCCCGCGGTTGACAC............................................ | 24 | 0 | 14 | 0.14 | 2 | 2 | 0 | 0 | 0 | 0 |
| .................................................................................TGCGATACCACCGGGGACACCGTCGG.................................................................... | 26 | 1 | 7 | 0.14 | 1 | 1 | 0 | 0 | 0 | 0 |
| ...................................................................................CGATACCACCGGGGACACCGTCGGTC.................................................................. | 26 | 0 | 7 | 0.14 | 1 | 1 | 0 | 0 | 0 | 0 |
| ..................................................................................ACGATACCACCGGGGACACCGTCGG.................................................................... | 25 | 1 | 7 | 0.14 | 1 | 1 | 0 | 0 | 0 | 0 |
| ......................................................................................TACCACCGCGGACACCGTCGGTCC................................................................. | 24 | 1 | 7 | 0.14 | 1 | 1 | 0 | 0 | 0 | 0 |
| ..............GCGTTTCCTCCGCGGGGCCGGCTC......................................................................................................................................... | 24 | 2 | 7 | 0.14 | 1 | 0 | 1 | 0 | 0 | 0 |
| ..................................................................................GCGATACCACCGGGGACACCGTCCG.................................................................... | 25 | 1 | 7 | 0.14 | 1 | 1 | 0 | 0 | 0 | 0 |
| ......................................................................................TACCACCGGGGACACCGTCGGTCCCAT.............................................................. | 27 | 0 | 7 | 0.14 | 1 | 1 | 0 | 0 | 0 | 0 |
| ..................................................................................GCGATACCACCGGGGACACCGTCGGA................................................................... | 26 | 1 | 7 | 0.14 | 1 | 1 | 0 | 0 | 0 | 0 |
| ...........................................................................................................TCCCATGGATCCCGCGGTTGACACT........................................... | 25 | 0 | 14 | 0.14 | 2 | 2 | 0 | 0 | 0 | 0 |
| ...................................................................................CGATACCAGCGGGGACACCGTCGG.................................................................... | 24 | 1 | 7 | 0.14 | 1 | 1 | 0 | 0 | 0 | 0 |
| ...........................................................................................................TCCCATGGATCCCGCGGTTGACACTAGC........................................ | 28 | 0 | 14 | 0.14 | 2 | 2 | 0 | 0 | 0 | 0 |
| ..................................................................................GCGATACCTCCGGGGACACCGTCGG.................................................................... | 25 | 1 | 7 | 0.14 | 1 | 1 | 0 | 0 | 0 | 0 |
| ...........................................................................................................TCCCATGGATCCCGCGGTTGACA............................................. | 23 | 0 | 15 | 0.13 | 2 | 2 | 0 | 0 | 0 | 0 |
| ...........................................................................................................TCCCATGGATCCCGCGGTTG................................................ | 20 | 0 | 15 | 0.13 | 2 | 2 | 0 | 0 | 0 | 0 |
| ....................................................................................................CCGTCGGTCCCATGGATCCCGTGG................................................... | 24 | 1 | 15 | 0.13 | 2 | 0 | 2 | 0 | 0 | 0 |
| ..................................................................................GCGATACCACCGGGGACACCGTCGC.................................................................... | 25 | 1 | 8 | 0.13 | 1 | 1 | 0 | 0 | 0 | 0 |
| .................................................................................GGCGATACCACCGGGGACAC.......................................................................... | 20 | 0 | 8 | 0.13 | 1 | 1 | 0 | 0 | 0 | 0 |
| ..................................................................................................CACCGTCGGTCCCATGGATCCC....................................................... | 22 | 0 | 8 | 0.13 | 1 | 0 | 1 | 0 | 0 | 0 |
| .......................................................................................ACCACCGGGGACACCGTCGGTC.................................................................. | 22 | 0 | 8 | 0.13 | 1 | 1 | 0 | 0 | 0 | 0 |
| ...................................................................................CGATACCACCGGGGACACCGTCG..................................................................... | 23 | 0 | 8 | 0.13 | 1 | 1 | 0 | 0 | 0 | 0 |
| .....................................................................................ATACCACCGGGGACACCGTCGGT................................................................... | 23 | 0 | 8 | 0.13 | 1 | 0 | 0 | 1 | 0 | 0 |
| .......................................................................................ACCACCGGGGACACCGTCGG.................................................................... | 20 | 0 | 8 | 0.13 | 1 | 1 | 0 | 0 | 0 | 0 |
| ..................................................................................................CACCGTCGGTCCCATGGATCCCGCGG................................................... | 26 | 0 | 8 | 0.13 | 1 | 1 | 0 | 0 | 0 | 0 |
| ..................................................................................GCGATACCGCCGGGGACACCGTCG..................................................................... | 24 | 1 | 8 | 0.13 | 1 | 1 | 0 | 0 | 0 | 0 |
| ......................................................................................TACCACCGGGGACACCGTCA..................................................................... | 20 | 1 | 9 | 0.11 | 1 | 1 | 0 | 0 | 0 | 0 |
| ......................................................................................TACCACCGGGGACACCGT....................................................................... | 18 | 0 | 9 | 0.11 | 1 | 1 | 0 | 0 | 0 | 0 |
| ........................................................................................CCACCGGGGACACCGTCG..................................................................... | 18 | 0 | 11 | 0.09 | 1 | 1 | 0 | 0 | 0 | 0 |
| ..................TTTCTCCGGGGCGCCGGCTCC........................................................................................................................................ | 21 | 1 | 12 | 0.08 | 1 | 1 | 0 | 0 | 0 | 0 |
| ..............................................................................................................................GACACTAGCGGTGAGGCCAATTACTG....................... | 26 | 1 | 12 | 0.08 | 1 | 1 | 0 | 0 | 0 | 0 |
| .............................................................................................................................TGACACTAGCGGTGAGGCCAATTAC......................... | 25 | 1 | 12 | 0.08 | 1 | 1 | 0 | 0 | 0 | 0 |
| .......................................................................................................................CGCGGTTGACACTAGCGGTGAGGCCA.............................. | 26 | 0 | 12 | 0.08 | 1 | 1 | 0 | 0 | 0 | 0 |
| ..............................................................................................................................GACACTAGCGGTGAGGCCAATTAC......................... | 24 | 1 | 12 | 0.08 | 1 | 1 | 0 | 0 | 0 | 0 |
| ..................TTTCTCCGGGGCGCCGGCTCT........................................................................................................................................ | 21 | 2 | 12 | 0.08 | 1 | 1 | 0 | 0 | 0 | 0 |
| .............................................................................................................................TGACACTAGCGGTGAGGCCAATTACTG....................... | 27 | 1 | 12 | 0.08 | 1 | 1 | 0 | 0 | 0 | 0 |
| ...................................................................................................................................TAGCGGTGAGGCCAATAACTGTAGC................... | 25 | 0 | 12 | 0.08 | 1 | 1 | 0 | 0 | 0 | 0 |
| ..................TTTCTCCGAGGCGCCGGCTCCC....................................................................................................................................... | 22 | 1 | 13 | 0.08 | 1 | 1 | 0 | 0 | 0 | 0 |
| ...........................................................................TACCCCGGAGATACCACCGGGGACA........................................................................... | 25 | 1 | 13 | 0.08 | 1 | 1 | 0 | 0 | 0 | 0 |
| .........................................................................................................................................TGAGGCCAATAACTGTAGCTCCG............... | 23 | 0 | 13 | 0.08 | 1 | 1 | 0 | 0 | 0 | 0 |
| .............................................................................................................CCATGGATCCCGCGGTTGACACTAGC........................................ | 26 | 0 | 14 | 0.07 | 1 | 1 | 0 | 0 | 0 | 0 |
| .............................................................................................................CCATGGATCCCGCGGTTGACACTA.......................................... | 24 | 0 | 14 | 0.07 | 1 | 1 | 0 | 0 | 0 | 0 |
| ...........................................................................................................TCCCATGGATCCCGCGGTTGACACTAG......................................... | 27 | 0 | 14 | 0.07 | 1 | 1 | 0 | 0 | 0 | 0 |
| ........................................................................................................................................GTGAGGCCAATAACTTTG..................... | 18 | 2 | 14 | 0.07 | 1 | 1 | 0 | 0 | 0 | 0 |
| ................................................................................................................TGGATCCCGCGGTTGACACTAGCGG...................................... | 25 | 0 | 14 | 0.07 | 1 | 1 | 0 | 0 | 0 | 0 |
| .........................................................................................................GGTCCCATGGATCCCGCGGTTGA............................................... | 23 | 0 | 14 | 0.07 | 1 | 0 | 0 | 1 | 0 | 0 |
| ..................................................................................GCGATACCACCCGGGACAGCGTCGT.................................................................... | 25 | 3 | 14 | 0.07 | 1 | 0 | 0 | 0 | 1 | 0 |
| ................................................................................................................TGGATCCCGCGGTTGACACTAGCG....................................... | 24 | 0 | 15 | 0.07 | 1 | 1 | 0 | 0 | 0 | 0 |
| ................................................................................................................TGGATCCCGCGGTTGACACTAGC........................................ | 23 | 0 | 15 | 0.07 | 1 | 1 | 0 | 0 | 0 | 0 |
| ....................................................................................................................TCCCGCGGTTGACACTAGAA....................................... | 20 | 2 | 15 | 0.07 | 1 | 1 | 0 | 0 | 0 | 0 |
| .....................................................................................................................CCCGCGGTTGACACTAGC........................................ | 18 | 0 | 15 | 0.07 | 1 | 1 | 0 | 0 | 0 | 0 |
| ...........................................................................................................TCCCATGGATCCTGCGGTTG................................................ | 20 | 1 | 15 | 0.07 | 1 | 1 | 0 | 0 | 0 | 0 |
| ....................................................................................................................TCCCGCGGTTGACACTAG......................................... | 18 | 0 | 15 | 0.07 | 1 | 1 | 0 | 0 | 0 | 0 |
| ....................................................................................................CCGTCGGTCCCATGGATCCCGCG.................................................... | 23 | 0 | 15 | 0.07 | 1 | 1 | 0 | 0 | 0 | 0 |
| ................................................................................................................TGGATCCCGCGGTTGAAA............................................. | 18 | 1 | 16 | 0.06 | 1 | 0 | 0 | 1 | 0 | 0 |
| ...........................................................................................................TCCCATGGATCCCACGGTTGACACCAGC........................................ | 28 | 2 | 17 | 0.06 | 1 | 1 | 0 | 0 | 0 | 0 |
| .....................................................................................................CGTCGGTCCCATGGATCCCGCG.................................................... | 22 | 0 | 17 | 0.06 | 1 | 1 | 0 | 0 | 0 | 0 |
| ...........................................................................................................TCCCATGGATCCCACGGTTGACACCAG......................................... | 27 | 2 | 17 | 0.06 | 1 | 1 | 0 | 0 | 0 | 0 |
| .....................................................................TCGGTGTACCCCGGCGATACCACCG................................................................................. | 25 | 0 | 18 | 0.06 | 1 | 1 | 0 | 0 | 0 | 0 |
| .....................................................................TCGGTGTACCCCGGCGATACCACCGG................................................................................ | 26 | 0 | 18 | 0.06 | 1 | 1 | 0 | 0 | 0 | 0 |
| .....................................................................................ATTACGCCGGGGACACCG........................................................................ | 18 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 1 |
| .........................................................................................................................................TGAGGCCAATTACTGCAGCTCCG............... | 23 | 2 | 20 | 0.05 | 1 | 1 | 0 | 0 | 0 | 0 |
| .........................................................................TGTACCCCGGCGATACCACC.................................................................................. | 20 | 0 | 20 | 0.05 | 1 | 1 | 0 | 0 | 0 | 0 |
| .........................................................................................................................................TGAGGCCAATTACTGCAGC................... | 19 | 2 | 20 | 0.05 | 1 | 1 | 0 | 0 | 0 | 0 |
| ..................................................................................................................................CTAGCGGTGAGGCCAATAGT......................... | 20 | 2 | 20 | 0.05 | 1 | 1 | 0 | 0 | 0 | 0 |
| #################################################################################################################-------------------------------------------------------------- AAGCGGAGCACACGCGCAAAAGAGGCGCCGCGGCCGAGGGTCGAGTGGTTAAGGTCTAGTGAAGGGCGGAGCCACATGGGGCCGCTATGGTGGCCCCTGTGGCAGCCAGGGTACCTAGGGCGCCAACTGTGATCGCCACTCCGGTTATTGACATCGAGGCTCTCTGGATGAGGAT *****************************************************....................((((.......(((.((((((.((((((........))))))))))))..)))......))))....*********************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M042 female body |
V111 male body |
|---|---|---|---|---|---|---|---|
| ......................................GGTCGAGTGGTTAAGGTCTAGTG.................................................................................................................. | 23 | 0 | 4 | 5.50 | 22 | 22 | 0 |
| .....................................GGGTCGAGTGGTTAAGGTCTAGTG.................................................................................................................. | 24 | 0 | 4 | 2.25 | 9 | 9 | 0 |
| ......................................GGTCGAGTGGTTAAGGTCTAGT................................................................................................................... | 22 | 0 | 4 | 1.75 | 7 | 7 | 0 |
| .......................................GTCGAGTGGTTAAGGTCTAGTG.................................................................................................................. | 22 | 0 | 4 | 1.50 | 6 | 6 | 0 |
| ...............................................GTTAAGGTCTAGTGAAGGGCGGAGC....................................................................................................... | 25 | 0 | 1 | 1.00 | 1 | 1 | 0 |
| ....................................AGGGTCGAGTGGTTAAGGTCTAGT................................................................................................................... | 24 | 0 | 4 | 1.00 | 4 | 4 | 0 |
| ........................................TCGAGTGGTTAAGGTCTAGTG.................................................................................................................. | 21 | 0 | 4 | 0.75 | 3 | 2 | 1 |
| .....................................GGGTCGAGTGGTTAAGGTCTAGT................................................................................................................... | 23 | 0 | 4 | 0.75 | 3 | 3 | 0 |
| ....................................AGGGTCGAGTGGTTAAGGTCTAGTG.................................................................................................................. | 25 | 0 | 4 | 0.50 | 2 | 1 | 1 |
| ....GGAGCACACGCGCAAAAGAGGCGC................................................................................................................................................... | 24 | 0 | 2 | 0.50 | 1 | 1 | 0 |
| ........................................................................................................GCCAGGGTACCTAGGGCGCCAACTGT............................................. | 26 | 0 | 14 | 0.29 | 4 | 4 | 0 |
| .....................................CGGTCGAGTGGTTAAGGTCTAGTG.................................................................................................................. | 24 | 1 | 4 | 0.25 | 1 | 1 | 0 |
| ......................................GGTCGAGTCGTTAAGGTCTAGT................................................................................................................... | 22 | 1 | 4 | 0.25 | 1 | 1 | 0 |
| ..................................CGAGGGTCGAGTGGTTAAGGTCTAGT................................................................................................................... | 26 | 0 | 4 | 0.25 | 1 | 1 | 0 |
| .....................................GGGTCGGGTGGTTAAGGTCTAGTG.................................................................................................................. | 24 | 1 | 4 | 0.25 | 1 | 1 | 0 |
| ......................................GGTCGAGTGGTTAGGGTCTAGT................................................................................................................... | 22 | 1 | 4 | 0.25 | 1 | 1 | 0 |
| .........................................CGAGTGGTTAAGGTCTAGTG.................................................................................................................. | 20 | 0 | 4 | 0.25 | 1 | 1 | 0 |
| ...........................................AGTGGTTAAGGTCTAGTG.................................................................................................................. | 18 | 0 | 4 | 0.25 | 1 | 1 | 0 |
| ...............................GGCCGAGGGTCGAGTGGTTAAGGTCT...................................................................................................................... | 26 | 0 | 5 | 0.20 | 1 | 1 | 0 |
| ...................................................................GGAGCCACATGGGGCCGCTATGGTG................................................................................... | 25 | 0 | 11 | 0.18 | 2 | 2 | 0 |
| .....................................................................AGCCACATGGGGCCGCTATGGTG................................................................................... | 23 | 0 | 18 | 0.17 | 3 | 3 | 0 |
| ..........................................................................................................CAGGGTACCTAGGGCGCCAACT............................................... | 22 | 0 | 14 | 0.14 | 2 | 2 | 0 |
| .......................................................................................................AGCCAGGGTACCTAGGGCGCCAACTGT............................................. | 27 | 0 | 14 | 0.14 | 2 | 2 | 0 |
| .........................................................................................................ACAGGGTACCTAGGGCGCCAACTGT............................................. | 25 | 1 | 14 | 0.14 | 2 | 2 | 0 |
| ...............................................................................................ACTGTGGCAGCCAGGGTACC............................................................ | 20 | 1 | 7 | 0.14 | 1 | 1 | 0 |
| ...........................................................................................GGCCCCTGTGGCAGCCAGGGTACCT........................................................... | 25 | 0 | 7 | 0.14 | 1 | 1 | 0 |
| ............................................................................................................GGGTACCTAGGGCGCCAACTGTGAT.......................................... | 25 | 0 | 14 | 0.14 | 2 | 2 | 0 |
| ................................................................................................CTGTGGCAGCCTGGGTGCCT........................................................... | 20 | 2 | 8 | 0.13 | 1 | 1 | 0 |
| ..................................................................................CGCTATGGTGGCCCCTGTG.......................................................................... | 19 | 0 | 9 | 0.11 | 1 | 1 | 0 |
| .....................................................................................................................................CGCCACTCCGGTTAATGACGTCG................... | 23 | 2 | 20 | 0.10 | 2 | 2 | 0 |
| ..................................................................CGGAGCCACATGGGGCCGCTAT....................................................................................... | 22 | 0 | 11 | 0.09 | 1 | 1 | 0 |
| ................................................................TTTGGAGCCACATGGGGCCGCTATGGT.................................................................................... | 27 | 3 | 11 | 0.09 | 1 | 1 | 0 |
| ....................................................................GAGCCACATGGGGCCCCTATGGTG................................................................................... | 24 | 1 | 11 | 0.09 | 1 | 1 | 0 |
| ...................................................................GGAGCCACATGGGGCCGCTAT....................................................................................... | 21 | 0 | 11 | 0.09 | 1 | 1 | 0 |
| ................................................................................................................................GTGATCGCCACTCCGGTTAATGACGT..................... | 26 | 2 | 12 | 0.08 | 1 | 1 | 0 |
| ..................................................................................................................................GATCGCCACTCCGGTTATTGACATCG................... | 26 | 0 | 12 | 0.08 | 1 | 1 | 0 |
| ........................................................................................................................CGCCAACTGTGATCGCCACTCCGGTT............................. | 26 | 0 | 12 | 0.08 | 1 | 1 | 0 |
| ..........................................................................................................CAGGGTACCTAGGGCGCCAACTGTGAT.......................................... | 27 | 0 | 13 | 0.08 | 1 | 1 | 0 |
| ............................CGCGGCCGAGGGTCGAGT................................................................................................................................. | 18 | 0 | 13 | 0.08 | 1 | 1 | 0 |
| ...............................GGCCGAGGGTCGAGTGGTTAAGGTC....................................................................................................................... | 25 | 0 | 14 | 0.07 | 1 | 1 | 0 |
| .........................................................................................................CCAGGGTACCTAGGGTGCCAACT............................................... | 23 | 1 | 14 | 0.07 | 1 | 1 | 0 |
| .............................................................................................................GGTACCTAGGGCGCCAACTGTGAT.......................................... | 24 | 0 | 14 | 0.07 | 1 | 1 | 0 |
| .......................................................................................................AGCCAGGGTACCTAGGGCGCCAAC................................................ | 24 | 0 | 14 | 0.07 | 1 | 1 | 0 |
| ...........................................................................................................AGGGTACCTAGGGCGCGAACTGTGA........................................... | 25 | 1 | 14 | 0.07 | 1 | 1 | 0 |
| ..........................................................................................................CAGGGTACCTAGGGCGCCAACTGT............................................. | 24 | 0 | 14 | 0.07 | 1 | 1 | 0 |
| ......................................................................................................CAGCCAGGGTACCTAGGGCGCCAACTGT............................................. | 28 | 0 | 14 | 0.07 | 1 | 1 | 0 |
| ........................................................................................................GCCAGGGTACCTAGGGTGCCAACT............................................... | 24 | 1 | 14 | 0.07 | 1 | 1 | 0 |
| ................................GCCGAGGGTCGAGTGGTTA............................................................................................................................ | 19 | 0 | 14 | 0.07 | 1 | 1 | 0 |
| .........................................................................................................CCAGGGTACCTAGGGCGCCAACTGT............................................. | 25 | 0 | 14 | 0.07 | 1 | 1 | 0 |
| .......................................................................................................AGCCAGGGTACCTAGGGCGCCAACT............................................... | 25 | 0 | 14 | 0.07 | 1 | 1 | 0 |
| ............................................................................................................GGGGACCTAGGGCGCCAACTGTGAT.......................................... | 25 | 1 | 14 | 0.07 | 1 | 1 | 0 |
| ........................................................................................................GCCAGGGTACCTAGGGCGCCAAC................................................ | 23 | 0 | 14 | 0.07 | 1 | 1 | 0 |
| ..............................................................................................................GTACCTAGGGCGCCAACTGTGAT.......................................... | 23 | 0 | 15 | 0.07 | 1 | 1 | 0 |
| ............................................................................................................TGGTACCTAGGGCGCCAACTGT............................................. | 22 | 1 | 15 | 0.07 | 1 | 1 | 0 |
| .................................................................................................................CCTAGGGCGCCAACTGTGAT.......................................... | 20 | 0 | 15 | 0.07 | 1 | 1 | 0 |
| ............................................................................................................GGGTACCTAGGGCGCCAACTGT............................................. | 22 | 0 | 15 | 0.07 | 1 | 1 | 0 |
| .................................................................................................................CCTAGGGCGCCAACTGTGATCGC....................................... | 23 | 0 | 15 | 0.07 | 1 | 1 | 0 |
| ....................................................................................................GGCAGCCAGGGTACCTAGGGCGC.................................................... | 23 | 0 | 15 | 0.07 | 1 | 1 | 0 |
| .............................................................................................................GGTACCTAGGGCGCCAACTGT............................................. | 21 | 0 | 15 | 0.07 | 1 | 1 | 0 |
| ..................................................................................TGCTATGGTGGCCCCTGT........................................................................... | 18 | 1 | 17 | 0.06 | 1 | 1 | 0 |
| ....................................................................AAGCCACATGGGGCCGCTATGGT.................................................................................... | 23 | 1 | 19 | 0.05 | 1 | 1 | 0 |
| .........................................................................................................................GGCAGCTGTGATCGCCACTCCGGTT............................. | 25 | 2 | 19 | 0.05 | 1 | 1 | 0 |
| ...................................................................................................TGGCAGTCTGGGTACCTTG......................................................... | 19 | 3 | 20 | 0.05 | 1 | 0 | 1 |
| .....................................................................................................................................CGCTACTCCGGTTAATGACGTCG................... | 23 | 3 | 20 | 0.05 | 1 | 1 | 0 |
| ....................................................................................................................................TCGCCACTCCGGTTAATGACGTCG................... | 24 | 2 | 20 | 0.05 | 1 | 1 | 0 |
| .......................................................................CCACATGGGGCCGCTATGGTG................................................................................... | 21 | 0 | 20 | 0.05 | 1 | 1 | 0 |
| .......................................................................................................................................CCACTCCGGTTAATGACGTCG................... | 21 | 2 | 20 | 0.05 | 1 | 1 | 0 |
| Species | Coordinate | ID | Alignment |
|---|---|---|---|
| droPer2 | scaffold_1904:4251-4425 + | dpe_208 | TTCGCCTCGTGTGCGCGTTTTCTCCGCGGCGCCGGCTCCCAGCTCACCAATTCCAGATCACTTCCCGCCTCGGTGTACCCCGGCGATACCACCGGGGACACCGTCGGTCCCATGGATCCCGCGGTTGACACTAGCGGTGAGGCCAATAACTGTAGCTCCGAGAGACCTACTCCTA |
| dp5 | Unknown_group_179:27432-27605 + | TTCGCCTCGCGTGCGCGTTTTCTCCGTGGCGCCGGCTCCCAGCTCACCAACTCCAGGTCACTTTCCGCCTCGGTGTACCCCGGCGATACCCCCGGGGACACCGTCGGTCCCATGGATCCCGCGGTTGACACTAGCGGTGAGGCCAATAACTGTAGCTCCGG-GGACTTACTCCTA |
| Species | Read alignment | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| droPer2 |
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| dp5 |
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Generated: 05/15/2015 at 02:43 PM