ID:

dpe_2077

 Coordinate:

scaffold_76:228011-228204 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-37.6 -37.5 -36.6

Flybase annnotation

CDS [Dper\GL25474-cds]; exon [dper_GLEANR_7988:3]; CDS [Dper\GL25474-cds]; exon [dper_GLEANR_7988:2]; intron [Dper\GL25474-in]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TGGACCACAGCGACGGTCCTGCCCGACTACCAGCCAGCCAAAGCTGGCAAGTGTGCAGCCAAGGCCCCAAGCAAGCGGCAACGCTCGCCGGCAGACACCACCACGCAAGTCCTAAGTCGGCCAAGAGGACGAAAACCCTAAGCAATCGCTCGTTTGCCGAGGTGGCGAGACGAAAAACCCTCATTGGAGTCCTAGACAGGGGCTCCAAAGATGGGCAGATTCCTCGAAAACGAGTTTCCTTCAGGAGTTGGGTGGCACCAAGGGAGAGTGAAAGCCATCGTCTGCCAAGACGTC
********************************************************************************************************************************************.......((((((((..(((((...............(((((.((((((((((.....)))))))))).)).)))......))))).))))))))....******************************************************* 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V042
embryo
........................................................................................................................................................................................................................................................................AGAGTGAAAGCCATCGTCTGC......... 21 0 1 1.00 1 1 0
............................................................................................................................................AGCAATCGCTCGTTTGCCGAGG.................................................................................................................................... 22 0 1 1.00 1 1 0
...................................................................................................................................................................................................................................................................AAGGGAGAGTGAAAGCCATCGTCT........... 24 0 1 1.00 1 1 0
......................................................................................................................................ACCCTAAGCAATCGCTCGTTTGCC........................................................................................................................................ 24 0 1 1.00 1 1 0
TGGACCACAGCGACGGTCCTGCCCGAC........................................................................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0
......................................................................................................................................................................................................................GCAGATTCCTCGAAAACGAGTTTCC....................................................... 25 0 1 1.00 1 1 0
.......................................................................................................................................................................................................................................................................GAGAGTGAAAGCCATCGTCTGCCA....... 24 0 1 1.00 1 1 0
.......................................................................................................................................................................................................................................................................GAGAGTGAAAGCCATCGTCTGCC........ 23 0 1 1.00 1 1 0
................................................................................................................................................ATCGCTCGGTTGGCGAGGTGGCGA.............................................................................................................................. 24 2 1 1.00 1 1 0
.......................................................................................................................................................................................................................................................................GAGAGTGAAAGCCATCGTCTGGCA....... 24 1 1 1.00 1 1 0
...................................................................................................ACCACGCAAGTCCTAAGTCGGCCAAG......................................................................................................................................................................... 26 0 1 1.00 1 1 0
................................................................CCCCAAGCAAGCGGCAACGCTCG............................................................................................................................................................................................................... 23 0 20 0.40 8 8 0
..........................................................................................................................................................................CGAAAAACCCTCATTGAAA......................................................................................................... 19 2 5 0.20 1 1 0
.............CGGTCCTGCCCGACTACCAGCCA.................................................................................................................................................................................................................................................................. 23 0 6 0.17 1 1 0
................TCCTGCCCGACTACCAGCCAGCCAAAGC.......................................................................................................................................................................................................................................................... 28 0 20 0.15 3 3 0
.....................................................................................................................................................TCGTTTGCCGAGGTGGCGAGA............................................................................................................................ 21 0 17 0.12 2 2 0
.................CCTGCCCGACTACCAGCCAGCCAAAGC.......................................................................................................................................................................................................................................................... 27 0 20 0.10 2 2 0
...................TGCCCGACTACCAGCCAGCCAAAGC.......................................................................................................................................................................................................................................................... 25 0 20 0.10 2 2 0
..............................................................................................................................................................................................................................................................TCACCAAGGGAGATTGAAA..................... 19 2 19 0.05 1 0 1
......................CCGACTACCAGCCAGCCAAAGCTGGCA..................................................................................................................................................................................................................................................... 27 0 20 0.05 1 1 0
................................................................CCCCAAGCAAGCGGCAAC.................................................................................................................................................................................................................... 18 0 20 0.05 1 1 0
.....................................................................................................................................................TCGTTTGCCGAGGTGGCGAG............................................................................................................................. 20 0 20 0.05 1 1 0
.......................................................CAGCCAAGTCCCCAAGCAAGCGGCAA..................................................................................................................................................................................................................... 26 1 20 0.05 1 1 0

Anti-sense strand reads

ACCTGGTGTCGCTGCCAGGACGGGCTGATGGTCGGTCGGTTTCGACCGTTCACACGTCGGTTCCGGGGTTCGTTCGCCGTTGCGAGCGGCCGTCTGTGGTGGTGCGTTCAGGATTCAGCCGGTTCTCCTGCTTTTGGGATTCGTTAGCGAGCAAACGGCTCCACCGCTCTGCTTTTTGGGAGTAACCTCAGGATCTGTCCCCGAGGTTTCTACCCGTCTAAGGAGCTTTTGCTCAAAGGAAGTCCTCAACCCACCGTGGTTCCCTCTCACTTTCGGTAGCAGACGGTTCTGCAG
*******************************************************.......((((((((..(((((...............(((((.((((((((((.....)))))))))).)).)))......))))).))))))))....******************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V042
embryo
 V057
head
 V111
male body
..............................................................................................................................................................................TTTGGGAGTAACCTCAGGATCTGT................................................................................................ 24 0 1 48.00 48 34 12 1 1 0
.............................................................................................................................................................................................................................................................CCGTGGTTCCCTCTCACTTT..................... 20 0 1 33.00 33 16 17 0 0 0
...........................................................................................................................................................................................................................................................CACCGTGGTTCCCTCTCACTTT..................... 22 0 1 25.00 25 19 6 0 0 0
..........................................................................................................................................................................................................................................................CCACCGTGGTTCCCTCTCACTTT..................... 23 0 1 13.00 13 10 3 0 0 0
..............................................................................................................................................................................................................................................................CGTGGTTCCCTCTCACTTT..................... 19 0 1 11.00 11 8 3 0 0 0
...............................................................................................................................................................................................................................................................GTGGTTCCCTCTCACTTT..................... 18 0 1 11.00 11 0 11 0 0 0
.............................................................................................................................................................................TTTTGGGAGTAACCTCAGGATCTGT................................................................................................ 25 0 1 8.00 8 8 0 0 0 0
........................................................................................................................................................................................................................................................ACCCACCGTGGTTCCCTCTCACTTT..................... 25 0 1 7.00 7 6 1 0 0 0
...................................................ACACGTCGGTTCCGGGGTTCGTT............................................................................................................................................................................................................................ 23 0 1 7.00 7 7 0 0 0 0
.........................................................................................................................................................................................................................................................CCCACCGTGGTTCCCTCTCACTTT..................... 24 0 1 7.00 7 5 2 0 0 0
.................................................TCACACGTCGGTTCCGGGGTTCGTT............................................................................................................................................................................................................................ 25 0 1 7.00 7 7 0 0 0 0
......................................................................................................................................................................................................................................................CAACCCACCGTGGTTCCCTCTCACTTT..................... 27 0 1 6.00 6 6 0 0 0 0
.....................................................ACGTCGGTTCCGGGGTTCGTT............................................................................................................................................................................................................................ 21 0 1 6.00 6 6 0 0 0 0
...............................................................................................................................................................................TTGGGAGTAACCTCAGGATCTGT................................................................................................ 23 0 1 6.00 6 4 0 2 0 0
....................................................................................................GGTGCGTTCAGGATTCAGCCGGTTCT........................................................................................................................................................................ 26 0 1 5.00 5 4 0 0 0 1
............................................................................................................................................................................................................................................................ACCGTGGTTCCCTCTCACTTT..................... 21 0 1 5.00 5 4 1 0 0 0
.........................................................................................................................................................................................................................CTAAGGAGCTTTTGCTCAAAGGAAGT................................................... 26 0 1 5.00 5 1 4 0 0 0
............................................................................................................................................................................................CAGGATCTGTCCCCGAGGTTTCTAC................................................................................. 25 0 1 5.00 5 0 5 0 0 0
...................................................AAATGTCGGTTCCGGGGTTCGTT............................................................................................................................................................................................................................ 23 2 1 4.00 4 4 0 0 0 0
.......................................................................................................GCGTTCAGGATTCAGCCGGTTCT........................................................................................................................................................................ 23 0 1 4.00 4 3 1 0 0 0
...............................................................................................................................................TTAGCGAGCAAACGGCTCCACCGCT.............................................................................................................................. 25 0 1 3.00 3 3 0 0 0 0
................................................................................................................................................................................TGGGAGTAACCTCAGGATCTGT................................................................................................ 22 0 1 3.00 3 1 0 2 0 0
.............................................................................................................................................................................................................................................................CCGTGGTTCCCTCTCACTT...................... 19 0 1 3.00 3 3 0 0 0 0
..................................................................................................................TCAGCCGGTTCTCCTGCTTTTGGGAT.......................................................................................................................................................... 26 0 1 3.00 3 1 0 2 0 0
.......................................................................................................GCGTTCAGGATTCAGCCGGTTCTCCT..................................................................................................................................................................... 26 0 1 3.00 3 3 0 0 0 0
.......................................................................................................................................................................................................................................................AACCCACCGTGGTTCCCTCTCACTTT..................... 26 0 1 3.00 3 3 0 0 0 0
...............................................................................................................................................................................................................................................................ATGGTTCCCTCTCACTTT..................... 18 1 1 3.00 3 0 3 0 0 0
...................................................................................................TGGTGCGTTCAGGATTCAGCCGGT........................................................................................................................................................................... 24 0 1 2.00 2 2 0 0 0 0
......................................................................................................TGCGTTCAGGATTCAGCCGGTTCT........................................................................................................................................................................ 24 0 1 2.00 2 1 1 0 0 0
............................................................................................................................................................................................................................................................CCCGTGGTTCCCTCTCACTTT..................... 21 1 1 2.00 2 0 2 0 0 0
.................................................AAAAACGTCGGTTCCGGGGTTCGTT............................................................................................................................................................................................................................ 25 3 1 2.00 2 2 0 0 0 0
..........................................................................................................................................................................................CTCAGGATCTGTCCCCGAGGTTTCT................................................................................... 25 0 1 2.00 2 1 0 1 0 0
..............................................................................................................................................GTTAGCGAGCAAACGGCTCCACCGCT.............................................................................................................................. 26 0 1 2.00 2 2 0 0 0 0
..........................................................................................................................................................................................................................................................ACACCGTGGTTCCCTCTCACTT...................... 22 1 1 2.00 2 2 0 0 0 0
..............................................................................................................................................................................TTTGGGAGTAACCTCGGGATCTGT................................................................................................ 24 1 1 2.00 2 2 0 0 0 0
................................................................................................................................................TAGCGAGCAAACGGCTCCACCGCTCT............................................................................................................................ 26 0 1 2.00 2 0 2 0 0 0
..............................................................................................................................................................................................................................................................TGTGGTTCCCTCTCACTTT..................... 19 1 1 2.00 2 2 0 0 0 0
..............................................................................................................................................GTTAGCGAGCAAACGGCTCCACCGC............................................................................................................................... 25 0 1 2.00 2 2 0 0 0 0
...................................................................................................................................................................CCGCTCTGCTTTTTGGGAGTAACCT.......................................................................................................... 25 0 1 2.00 2 2 0 0 0 0
.........................................................................................................................GTTCTCCTGCTTTTGGGATTCGT...................................................................................................................................................... 23 0 1 2.00 2 2 0 0 0 0
.......................................................................................................................................................................TCTGCTTTTTGGGAGTAACC........................................................................................................... 20 0 1 2.00 2 0 2 0 0 0
.........CGCTGCCAGGACGGGCTGATGGT...................................................................................................................................................................................................................................................................... 23 0 1 2.00 2 2 0 0 0 0
.............................................................................................................................................................................................................................................................ACGTGGTTCCCTCTCACTTT..................... 20 1 1 2.00 2 0 2 0 0 0
..............................................................................................TGTGGTGGTGCGTTCAGGAT.................................................................................................................................................................................... 20 0 1 2.00 2 0 1 1 0 0
.............................................................................................................................................................................TTTTGTGAGTAACCTCAGGATCTGT................................................................................................ 25 1 1 2.00 2 0 2 0 0 0
..............................................................................................................................................................................................................................................................AATGGTTCCCTCTCACTTT..................... 19 2 1 2.00 2 2 0 0 0 0
...................................................................................................................................................CGAGCAAACGGCTCCACCGCTCT............................................................................................................................ 23 0 15 1.33 20 18 0 2 0 0
...................................................ATATGTCGGTTCCGGGGTTCGTT............................................................................................................................................................................................................................ 23 2 1 1.00 1 0 0 1 0 0
...........................................................................................................................................................................................................................................................CACCGTGATTCCCTCTCACTT...................... 21 1 1 1.00 1 1 0 0 0 0
......................................GTTTCGACCGTTCACACGTCGGTT........................................................................................................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................CTCCACCGCTCTGCTTTTTGGGAGT............................................................................................................... 25 0 1 1.00 1 0 0 1 0 0
...............................................................................................................................CCGCTTTTGGGATTCGTTAGCGAGC.............................................................................................................................................. 25 1 1 1.00 1 1 0 0 0 0
.............................................................................................CTGTGGTGGTGCGTTCAGGAT.................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................................................................................................................ATGGTTCCCTCTCACTTTC.................... 19 1 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................................GGATCTGTCCCCGAGGTTTCTAC................................................................................. 23 0 1 1.00 1 1 0 0 0 0
.....................................................................................................GTGCGTTCAGGATTCAGCCGGTTCT........................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................................................................................................AACGTGGTTCCCTCTCACTT...................... 20 1 1 1.00 1 1 0 0 0 0
................................................................................................................................................................AAACCGCTCTGCTTTTTGGGAGT............................................................................................................... 23 2 1 1.00 1 1 0 0 0 0
...................................................AAAAGTCGGTTCCGGGGTTCGTT............................................................................................................................................................................................................................ 23 2 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................................................CCCGAGGTTTCTACCCGTCTAAGGAG..................................................................... 26 0 1 1.00 1 1 0 0 0 0
....................................................................................................GGTGCGTTCAGGATTCAGCCGGT........................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0
........................................................................................................................................GGATTCGTTAGCGAGCAAACGGCTCC.................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
...................................................ACACGTCGGTTCCGGGGTTCG.............................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0
.......................................................................................GGCCGTCTGTGGTGGTGCGTTC......................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................CTGTCCCCGAGGTTTCTACCCGTCT........................................................................... 25 0 1 1.00 1 1 0 0 0 0
.......GTCGCTGCCAGGACGGGCTGATGGT...................................................................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................................GGATCTGTCCCCGAGGTTTCT................................................................................... 21 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................TTTGGGAGTAACCTCAGGATCTG................................................................................................. 23 0 1 1.00 1 1 0 0 0 0
......................................................................................................................................TGGGATTCGTTAGCGAGCAAACGGC....................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................................................................................................CGTGGTTCCCTCTCACTTTCGGT................. 23 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................................................................................................AACCCACCGTGGTTCCCTCTCACTTA..................... 26 1 1 1.00 1 1 0 0 0 0
...........................................................................................................................................................................................................................................................AACCGTGGTTCCCTCTCACTTT..................... 22 1 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................................................................................................................CCCACCGTGGTTCCCTCTCACT....................... 22 0 1 1.00 1 1 0 0 0 0
.........................................TCGACCGTTCACACGTCGGTTCC...................................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
.........CGCTGCCAGGACGGGCTGATGG....................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
..........GCTGCCAGGACGGGCTGATGGT...................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
...............................................GTTCACACGTCGGTTCCGGGGTTCGTT............................................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................................................................AATAAGGAGCTTTTGCTCAAAGGAAGT................................................... 27 2 1 1.00 1 1 0 0 0 0
..................................................AAAACGTCGGTTCCGGGGTTCGTT............................................................................................................................................................................................................................ 24 2 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................................................................CAGTGGTTCCCTCTCACTTT..................... 20 1 1 1.00 1 0 1 0 0 0
..........................................................................................................................................................................................................................................................CCACCGTGGTTCCCTCTCACTTTCGGT................. 27 0 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................................................................................................................TCTCACTTTCGGTAGCAGACGGT....... 23 0 1 1.00 1 0 0 1 0 0
.........AGCTGCCAGGACGGGCTGATGGT...................................................................................................................................................................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................................ATGGGAGTAACCTCAGGATCTGT................................................................................................ 23 1 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................................................................................................CGTGGTTCCCTCTCACTT...................... 18 0 1 1.00 1 1 0 0 0 0
.........................................................................TCGCCGTTGCGAGCGGCCGTCT....................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
..................................................................................................GTGGTGCGTTCAGGATTCAGC............................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
....................................................CACGTCGGTTCCGGGGTTCGTT............................................................................................................................................................................................................................ 22 0 1 1.00 1 0 1 0 0 0
.............................................................................................................................................................................................................................GGAGCTTTTGCTCAAAGGAAGTCCT................................................ 25 0 1 1.00 1 1 0 0 0 0
......................................................................................................................................................................................................CCCCGAGGTTTCTACCCGTCTAAGGAGC.................................................................... 28 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................GCTTTTGGGATTCGTTAGCGAGCAA............................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................................................ACCCGTCTAAGGAGCTTTTGCTCAAAG........................................................ 27 0 1 1.00 1 1 0 0 0 0
....................................................CACGTCGGTTCCGGGGTTCG.............................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0
..................................................................................................GTGGTGCGTTCAGGATTCAG................................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................................TTGGGATTCGTTAGCGAGCAAACGGCT...................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
............................................................................................................CAGGATTCAGCCGGTTCT........................................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0
.......................................................................................GGCCGTCTGTGGTGGTGCGTTCAGGAT.................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................GGGATTCGTTAGCGAGGAAACGGCT...................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
.............................................................................CGTTGCGAGCGGCCGTCTGT..................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
...................................................AAACGTCGGTTCCGGGGTTCGTT............................................................................................................................................................................................................................ 23 1 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................................................................................................ACCGTGGTTCCCTCTCACTTG..................... 21 1 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................CACCGCTCTGCTTTTTGGGAGT............................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................................................................TTGTGGTTCCCTCTCACTTT..................... 20 2 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................................................................AGGAGCTTTTGCTCAAAGGAAGTCCT................................................ 26 0 1 1.00 1 1 0 0 0 0
...................................................AAACGTCGGTTCCAGGGTTCGT............................................................................................................................................................................................................................. 22 2 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................GGGAGTAACCTCAGGATCTGTCCCC............................................................................................ 25 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................................TCTGTCCCCGAGGTTTCTACCCGT............................................................................. 24 0 1 1.00 1 0 0 1 0 0
..................................GTCGGTTTCGACCGTTCACACGTCGGTTC....................................................................................................................................................................................................................................... 29 0 1 1.00 1 0 1 0 0 0
.................................................................................................GGTGGTGCGTTCAAGATTCAGC............................................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................................TTGGGCGTAACCTCAGGATCTGT................................................................................................ 23 1 1 1.00 1 0 0 1 0 0
........................................................................................................CGTTCAGGATTCAGCCGGTTCTCCT..................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
...........................................................................................................TCAGGATTCAGCCGGTTCTCCT..................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
.............................................CCGTTCACACGTCGGTTCCGGGGT................................................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0
..................................................................................................................TCAGCCGGTTCTCCTGCTTTTGGGATT......................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 1
..........................................................................................................................................................................................................................AAAGGAGCTTTTGCTCAAAGAAAGTCCTG............................................... 29 3 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................CTGCTTTTTGGGAGTAACCTCAGGAT.................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
......................................................................................................................................................................................................................................................CAACCCACCGTGGTTCCCTCTCACTT...................... 26 0 1 1.00 1 1 0 0 0 0
....................................................AACGTCGGTTCCGAGGTTCGTT............................................................................................................................................................................................................................ 22 2 1 1.00 1 1 0 0 0 0
................................................................................................TGGTGGTGCGTTCAGGAT.................................................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0
.......................................................................................................GCGTTCAGGATTCAGCCGGTTC......................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
................................................................................................................................................................................................................................GCTTTTGCTCAAAGGAAGTCCT................................................ 22 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................TCCTGCTTTTGGGATTCGTT..................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................GCTTTTGGGATTCGTTAGCGAGCA............................................................................................................................................. 24 0 1 1.00 1 0 0 1 0 0
..........................................................................................................................................................................................................................................................................TCACTTTCGGTAGCAGACGG........ 20 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................GGGATTCGTTAGCGAGCAAACGGCT...................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
........................................................................ATCGCCGTTGCGAGCGGCCGTCT....................................................................................................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0
...........................................................................................................................................................................................................................AAGGAGCTTTTGCTCAAAGGAAGT................................................... 24 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................................................................................................................TTGGTTCCCTCTCACTTT..................... 18 1 1 1.00 1 0 1 0 0 0
............................................................................................................CAGGATTCAGCCGGTTCTCCTGCTTTT............................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
........................................................................................................................GGTTCTCCTGCTTTTGGGATTCGT...................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................................................................................................................CCCACCGTGGTTCCCTCTCACTT...................... 23 0 1 1.00 1 1 0 0 0 0
..................................................CACACGTCGGTTCCGGGGTTCGTT............................................................................................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................................................AAAGGAGCTTTTGCTCAAAGGAAGT................................................... 25 1 1 1.00 1 1 0 0 0 0
....................................................CACGTCGGTTCCGAGGTTCGTT............................................................................................................................................................................................................................ 22 1 1 1.00 1 1 0 0 0 0
...................................................................................................................CAGCCGGTTCTCCTGCTTTTGGGAT.......................................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0
.......GTCGCTGCCAGGACGGGCTGATGGTC..................................................................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
......................................................................................................................................................................................................................................................CAACCCACCGTGGTTCCCGCTCACTTT..................... 27 1 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................................................................TCTAAGGAGCTTTTGCTCAAAGGAAGT................................................... 27 0 1 1.00 1 1 0 0 0 0
................................................................................................................................................TAGCGAGCAAACGGCTCCACCGC............................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................................................CTACCCGTCTAAGGAGCTTTTGCTCAA.......................................................... 27 0 1 1.00 1 1 0 0 0 0
...............................................................................................GTGGTGGTGCGTTCAGGAT.................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................................................................................................AGTGGTTCCCTCTCACTTT..................... 19 1 1 1.00 1 1 0 0 0 0
...................................................AAAAATCGGTTCCGGGGTTCGTT............................................................................................................................................................................................................................ 23 3 3 1.00 3 3 0 0 0 0
..................................................................................................GTGGTGCGTTCAGGATTCAGCCGGT........................................................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0
.....................................................................................................................................................................................................................................................ACAACCCACCGTGGTTCCCTCTCACTTT..................... 28 1 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................................................................................................................................CTCACTTTCGGTAGCAGACGGTTCT.... 25 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................TCCACCGCTCTGCTTTTTGGGAGT............................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
....................................................AACGTCGGTTCCGGGGTTCGTT............................................................................................................................................................................................................................ 22 1 1 1.00 1 1 0 0 0 0
........................................TTCGACCGTTCACACGTCGGTTCG...................................................................................................................................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0
.......................................................................................................GCGTTCAGGATTCAGCCGGTTCTCC...................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
...........................................................................................................................................................................................................................................................CACCGGGGTTCCCTCTCACTTT..................... 22 1 1 1.00 1 0 1 0 0 0
..........................................................................................................TTCAGGATTCAGCCGGTTCTCCT..................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................................................................................CCACCGTGGTTCCCACTCACTTT..................... 23 1 1 1.00 1 1 0 0 0 0
......................................................CGTCGGTTCCGGGGTTCGTT............................................................................................................................................................................................................................ 20 0 7 0.86 6 3 0 3 0 0
.......................................................GTCGGTTCCGGGGTTCGTT............................................................................................................................................................................................................................ 19 0 20 0.75 15 0 11 4 0 0
................................................................GGGGTTCGTTCGCCGTTGCGAGC............................................................................................................................................................................................................... 23 0 20 0.70 14 12 0 1 1 0
............................................................................................................................................................................................................................................................TCCGTGGTTCCCGCTCACTTT..................... 21 2 2 0.50 1 1 0 0 0 0
..........................................................................................................................................................................................................................................................TTACCGTGGTTCCCTCTCACTTT..................... 23 2 2 0.50 1 1 0 0 0 0
...........................................................................................................................................................................................................AGGTTTCAACCAGTCTAAGAAG..................................................................... 22 3 2 0.50 1 0 1 0 0 0
.........................................................................................................................................................................................................................................................TTCACCGTGGTTCCCTCTCACTTT..................... 24 2 2 0.50 1 1 0 0 0 0
...........................................................................................................................................................................................................................................................CACCGTGGTTCCCGCTCACTTT..................... 22 1 2 0.50 1 1 0 0 0 0
.....................................................AAATCGGTTCCGGGGTTCGTT............................................................................................................................................................................................................................ 21 2 4 0.50 2 2 0 0 0 0
.............................................................................................................................................................................................................................................................CCGTGGTTCCCGCTCACTTT..................... 20 1 2 0.50 1 1 0 0 0 0
....................................................AAAATCGGTTCCGGGGTTCGTT............................................................................................................................................................................................................................ 22 3 4 0.50 2 2 0 0 0 0
...............................................................................................................................................ATAGCGAGCAAACGGCTCCACCGCTCT............................................................................................................................ 27 1 2 0.50 1 1 0 0 0 0
...................................................................................................................................................................................GAGTAACCTCAGGATCTGT................................................................................................ 19 0 2 0.50 1 1 0 0 0 0
............................................................................................................................................................................................................................................................AATGTGGTTCCCTCTCACTTT..................... 21 2 2 0.50 1 1 0 0 0 0
.................................................................GGGTTCGTTCGCCGTTGCGAGC............................................................................................................................................................................................................... 22 0 20 0.45 9 8 0 1 0 0
.......................................................TTCGGTTCCGGGGTTCGTT............................................................................................................................................................................................................................ 19 1 20 0.35 7 6 0 1 0 0
............................................................................................TCTGTGGTGGTGGGCACAGGA..................................................................................................................................................................................... 21 3 3 0.33 1 0 0 0 1 0
.............................................................................CGTTGCGAGCCGCCGTCTGTGGT.................................................................................................................................................................................................. 23 1 3 0.33 1 1 0 0 0 0
.............................................................................................................................................CGCTAGCGGGCAAACGGCAC..................................................................................................................................... 20 3 4 0.25 1 0 0 0 1 0
.....................GGGCTGATGGTCGGTCGGT.............................................................................................................................................................................................................................................................. 19 0 20 0.25 5 4 0 1 0 0
...............................................................CGGGGTTCGTTCGCCGTTGCGAGC............................................................................................................................................................................................................... 24 0 20 0.25 5 3 2 0 0 0
........................................................TCGGTTCCGGGGTTCGTT............................................................................................................................................................................................................................ 18 0 20 0.25 5 3 2 0 0 0
..............................................................................................................................................................................TTCGGGAGTAACCTCAGGATCTGT................................................................................................ 24 1 4 0.25 1 0 0 1 0 0
...............CAGGACGGGCTGATGGTCGGT.................................................................................................................................................................................................................................................................. 21 0 20 0.25 5 3 2 0 0 0
................................................................................................TGGTGGTGCGCTAAGGAT.................................................................................................................................................................................... 18 2 5 0.20 1 0 0 0 1 0
....................CGGGCTGATGGTCGGTCGGT.............................................................................................................................................................................................................................................................. 20 0 20 0.20 4 1 3 0 0 0
............TGCCAGGACGGGCTGATGGTCGGT.................................................................................................................................................................................................................................................................. 24 0 6 0.17 1 0 0 1 0 0
......................GGCTGATGGTCGGTCGGTT............................................................................................................................................................................................................................................................. 19 0 20 0.15 3 2 1 0 0 0
.......................................................GTCGGTTCCGGGGTTCGT............................................................................................................................................................................................................................. 18 0 20 0.15 3 2 0 1 0 0
............................................................TTCCGGGGTTCGTTCGCCGTTGCGAGC............................................................................................................................................................................................................... 27 0 20 0.15 3 3 0 0 0 0
...............................................................TGGGGTTCGTTCGCCGTTGCGAGC............................................................................................................................................................................................................... 24 1 20 0.15 3 3 0 0 0 0
....................................................AATGTCGGTTCCGGGGTTCGTT............................................................................................................................................................................................................................ 22 2 20 0.15 3 3 0 0 0 0
..........................................................GGTTCCGGGGTTCGTTCGCCGTTGCGA................................................................................................................................................................................................................. 27 0 20 0.15 3 3 0 0 0 0
................................................................GGGGTTCGTTCGCCGTTGCGAG................................................................................................................................................................................................................ 22 0 20 0.15 3 3 0 0 0 0
.............................................................TCCGGGGTTCGTTCGCCGTTGCGAGC............................................................................................................................................................................................................... 26 0 20 0.15 3 3 0 0 0 0
.....................................................ATGTCGGTTCCGGGGTTCGTT............................................................................................................................................................................................................................ 21 1 20 0.15 3 3 0 0 0 0
............TGCCACGACGGGCTGATGGTCGGT.................................................................................................................................................................................................................................................................. 24 1 7 0.14 1 1 0 0 0 0
...........CTGCCAGGCCGGGCTGATGGTCGGT.................................................................................................................................................................................................................................................................. 25 1 7 0.14 1 0 0 1 0 0
.CCGGGTGTCGCAGTCAGGAC................................................................................................................................................................................................................................................................................. 20 3 7 0.14 1 0 0 0 1 0
....................................................................................................................................................GAGCAAACGGCTCCACCGCTCT............................................................................................................................ 22 0 16 0.13 2 0 2 0 0 0
.........................................................................................CCCTCTGTGGTGGTACGTGC......................................................................................................................................................................................... 20 3 8 0.13 1 0 0 1 0 0
.....................................................AAAACGGTTCCGGGGTTCGTT............................................................................................................................................................................................................................ 21 3 8 0.13 1 1 0 0 0 0
...........CTGCCAGGACGGGCTGATGGT...................................................................................................................................................................................................................................................................... 21 0 9 0.11 1 1 0 0 0 0
..........................................................GGTTCCGGGGTTCGTTCGCCGT...................................................................................................................................................................................................................... 22 0 20 0.10 2 2 0 0 0 0
...............................................................CGGGGTTCGTTCGCCGTTGCG.................................................................................................................................................................................................................. 21 0 20 0.10 2 2 0 0 0 0
...............AAGGACGGGCTGATGGTCGGT.................................................................................................................................................................................................................................................................. 21 1 20 0.10 2 2 0 0 0 0
...................ACGGGCTGATGGTCGGTCGGT.............................................................................................................................................................................................................................................................. 21 0 20 0.10 2 2 0 0 0 0
..................GACGGGCTGATGGTCGGTCGGTT............................................................................................................................................................................................................................................................. 23 0 20 0.10 2 2 0 0 0 0
......................................................AATCGGTTCCGGGGTTCGTT............................................................................................................................................................................................................................ 20 2 20 0.10 2 2 0 0 0 0
............................................................TTCCGGGGTTCGTTCGCCGTTGCGAG................................................................................................................................................................................................................ 26 0 20 0.10 2 2 0 0 0 0
.......................................................GTCGGTTCCGGGGTTCGTTC........................................................................................................................................................................................................................... 20 0 20 0.10 2 2 0 0 0 0
......................GGCTGATGGTCGGTCGGTTT............................................................................................................................................................................................................................................................ 20 0 20 0.10 2 2 0 0 0 0
..................................................................................................................................................GCGAGCAAACGGCTCCACCGCTCT............................................................................................................................ 24 0 11 0.09 1 1 0 0 0 0
.................................................................................................................................................TGCGAGCAAACGGCTCCACCGCTCT............................................................................................................................ 25 1 11 0.09 1 1 0 0 0 0
..........ATTGCCAGGACGGGCTGATGGT...................................................................................................................................................................................................................................................................... 22 2 11 0.09 1 1 0 0 0 0
.....................................................................................................................................................AGCAAACGGCTCCACCGCTCT............................................................................................................................ 21 0 17 0.06 1 1 0 0 0 0
..............................................CGTGCACACGTCGGGTCC...................................................................................................................................................................................................................................... 18 2 17 0.06 1 0 0 0 1 0
.......................GCTGATGGTCGGTCGGTTTCGA......................................................................................................................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0
..................GACGGGCTGATGGTCGGTCGGT.............................................................................................................................................................................................................................................................. 22 0 20 0.05 1 0 1 0 0 0
.......................................................AACGGTTCCGGGGTTCGTT............................................................................................................................................................................................................................ 19 2 20 0.05 1 0 1 0 0 0
.......................................................GTCCGTTCCGGGGTTCGTT............................................................................................................................................................................................................................ 19 1 20 0.05 1 1 0 0 0 0
.........................................................CGGTTCCGGGGTTCGTTCGCCGTTG.................................................................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0
....................CGGGCTGATGGTCGGTCGGTTTCGA......................................................................................................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0
................................................................GGGGTTCGTTCGCCGTTGCGA................................................................................................................................................................................................................. 21 0 20 0.05 1 1 0 0 0 0
..........................................................GGTTCCGGGGTTCGTTCGCCG....................................................................................................................................................................................................................... 21 0 20 0.05 1 0 0 1 0 0
........................CTGATGGTCGGTCGGTTTCGA......................................................................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0
..............................................................CCGGGGTTCGTTCGCCGTTGCGAGC............................................................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0
....................CGGGCTGATGGTCGGTCGGTT............................................................................................................................................................................................................................................................. 21 0 20 0.05 1 0 0 0 0 1
..................GACGGGCTGATGGTCGGTCGGA.............................................................................................................................................................................................................................................................. 22 1 20 0.05 1 1 0 0 0 0
.....................GGGCTGATGGTCGGTCGGTTTCG.......................................................................................................................................................................................................................................................... 23 0 20 0.05 1 0 0 1 0 0
.....................GGGCTGATGGTCGGTCGGTTT............................................................................................................................................................................................................................................................ 21 0 20 0.05 1 1 0 0 0 0
...............CAGGACGGGCTGATGGTCGGTCGGT.............................................................................................................................................................................................................................................................. 25 0 20 0.05 1 1 0 0 0 0
........................................................ACGGTTCCGGGGTTCGTT............................................................................................................................................................................................................................ 18 1 20 0.05 1 0 1 0 0 0
...............................................................TGGGGTTCGTTCGCCGTT..................................................................................................................................................................................................................... 18 1 20 0.05 1 1 0 0 0 0
.......................GCTGATGGTCGGTCGGTTTCGAC........................................................................................................................................................................................................................................................ 23 0 20 0.05 1 1 0 0 0 0
......................................................................................................................................TGGGATAAGTTAGCGCGC.............................................................................................................................................. 18 3 20 0.05 1 0 0 0 1 0
..........................GATGGTCGGTCGGTTTCGA......................................................................................................................................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0
.................................................................GGGTTCGTTCGCCGTTGCG.................................................................................................................................................................................................................. 19 0 20 0.05 1 1 0 0 0 0
....................CGGGCTGATGGTCGGTCG................................................................................................................................................................................................................................................................ 18 0 20 0.05 1 1 0 0 0 0
.......................................................GGCGGTTCCGGGGTTCGTT............................................................................................................................................................................................................................ 19 1 20 0.05 1 0 1 0 0 0
..........................................................GGTTCCGGGGTTCGTTCGCCGTTG.................................................................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0
..................................................................................................................................................GCGAGCAAACGGCTCCACCGC............................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0
...............CAGGACGGGCTGATGGTCGGTCGGTT............................................................................................................................................................................................................................................................. 26 0 20 0.05 1 1 0 0 0 0
...........................................................GTTCCGGGGTTCGTTCGCC........................................................................................................................................................................................................................ 19 0 20 0.05 1 1 0 0 0 0
...............CCGGACGGGCTGATGGTCGGTCGT............................................................................................................................................................................................................................................................... 24 2 20 0.05 1 1 0 0 0 0
......................GGCTGATGGTCGGTCGGT.............................................................................................................................................................................................................................................................. 18 0 20 0.05 1 1 0 0 0 0
................CGGACGGGCTGATGGTCGGTCGT............................................................................................................................................................................................................................................................... 23 2 20 0.05 1 1 0 0 0 0
.................GGACGGGCTGATGGTCGGTCGGTT............................................................................................................................................................................................................................................................. 24 0 20 0.05 1 1 0 0 0 0
................................................................TGGGTTCGTTCGCCGTTGCGAGC............................................................................................................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0
......................GGCTGATGGTCGGTCGGTTTCGAC........................................................................................................................................................................................................................................................ 24 0 20 0.05 1 1 0 0 0 0
...................ACGGGCTGATGGTCGGTCGGTT............................................................................................................................................................................................................................................................. 22 0 20 0.05 1 0 1 0 0 0
..........................................................GGTTCCGGGGTTCGTTCGCCGTT..................................................................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0
..................AACGGGCTGATGGTCGGTCGGTT............................................................................................................................................................................................................................................................. 23 1 20 0.05 1 1 0 0 0 0
................AGGACGGGCTGATGGTCGGT.................................................................................................................................................................................................................................................................. 20 0 20 0.05 1 1 0 0 0 0
.......................................................TTCGGTTCCGGGGTTCGTG............................................................................................................................................................................................................................ 19 2 20 0.05 1 1 0 0 0 0
...................ACGGGCTGATGGTCGGTCGGTTT............................................................................................................................................................................................................................................................ 23 0 20 0.05 1 1 0 0 0 0
.................GGACGGGCTGATGGTCGGT.................................................................................................................................................................................................................................................................. 19 0 20 0.05 1 0 0 1 0 0
...................................................................................................................................................CGAGCAAACGGCTCCACCGCT.............................................................................................................................. 21 0 20 0.05 1 1 0 0 0 0
.........................................................AGGTTCCGGGGTTCGTTCGCCGT...................................................................................................................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_76:227961-228254 - dpe_2077 TG----------------GACCACAGCGACGGTCCTGCCCGACTA-----CCAGCCAGCCAAAGCTGGCAAGTGTGCAGCCAAGGCCCCAAGCAAGCGGCAACGCTCGCCGG--CA---GACACCACCACGCAAGTCCTA-------------------AGTCG--------------------------------GCCAAGAGGACGAAAA------C---CCTAAGCAATCGCTCGTTTGCCGAGGTGGCGAGACGAAAAACCCTCATTGGAGTCCTAGACAGGGGCTCCAAAGATGGGCAGATTCCTCGAAAAC--------------------GAGTTTCC----------------------------------------TTC--AGGAGTTGGGTGGCACCAAGGGAGAGTGAAAGCCATCGTCTGCCAAGA--------CGTC
dp5 XL_group3a:1823305-1823618 + dps_2854 TG----------------GACCACAGCGACGGTCCTGCCCGACTA-----CCAGCCAGCCAAAGCTGGCAAGTGTGCAGCCAAGGCCCCAAGCAAGCGGCAACGCTCGCCGG--CA---GACACCTTCACGCAAGTCCTA-------------------AGTCG--------------------------------GCCAAGAGGACGAAAA------C---CCTAAGCAATCGCTCGTTTGCCGAGGTGGCGAGACGAAAAACCCTCATTGGAGTCCTAGACAGGGGCTCCAAAGATGGGCAGATTCCTCGAGACAAGTGGCACCTCATGGAAAACGAGTTTCC----------------------------------------TTC--AGGAGTTGGGTGGCACCAAGGGAGAGTGAAAGCCATCGTCTGCCAAGA--------CGTC
droGri2 scaffold_14966:171846-172118 + CC----------------AGGC------------------------------------------------------------------------------------------------------------------------------AAAAAGGCAGCGCTTGCAGGAAGCACACGGACCCGTTGCA-----------------AAACGGGCCAAGATGCAGCAGGG---AAGGTCCTCTGCTGACATTGCCAAGGAGAGAATCCTTATAGGGATCCTTGACAAGGGAAACAAGGACGGAAGAATCCCAAGAAATCAGTGGAAGTGGGTGTCCAA-----TGCCTGAAGCTATTAAGCAAAGCGGCT--GGGTCACCACCGGTATGCAGGGATGCTGGGTGGTACCAGGGTAACACGAAGGTTATCGCCTGCTAAGA--------CGCT
droAna3 scaffold_1182:93-442 + GGCTGAGATCATAAATTGGGC---GAGGGAAATCCTGCCTGACTTTTCTTTCAGCCAGCAAAAGC----GGATGTGAGACTGGATCC-GA---------AGAAGCCGACAGAAGTAGGCGACTCTGCCAAGGATAGAGCACAAAGTGCGAAGAGGCAGAGGTCGACGGAC-----------GGTGGAA-----------------AAAAAGGTGCAGACGCAACAGAGCAACAGATCCTTCGCAGAGGTTACTAAGGGCAGGACCATCATTGGGGTCGTTGACAACGGCTCCAAAGATGGCCTGATCCCCAAGGAGCTTTGGCGGAGGGTGGTGAACGAGCTGCATGGTGCTAAGATGCTCAAGAGCGGAGGACCTCCACCG---------------------------------------------GACTGCAAAGA--------CG--
droBip1 scf7180000392257:19669-19992 + G------ATTATTAAGTGGGC---AAGGGAGGTCCTGCCCGCCTT-----CAAA----------CCGGCGGGTGTGAGGCTGGGGCC-GA---------GGAAGCTTGCTGGGTCA---GATCCTGCCAAGGAGATCGCA---------AACAGTCAGAAATCAACGGAG-----------GGAGGAGCCCCCCAAGCCAAGAAGAGGATGGCCAAGCCGCAGCCGTCCAACCGCTCGCTTGCCGAAGTGACGAAGGGAAGAACCTTTC-----GTCCTGGACAAGGGATCCTAAGATGGGCTCATCCCTAAGGAAC------------------------TTCC----------------------------------------TGCGAAGACGCAGGATGGTATCAAGGTAGCGTCAAGGGAATTGCCTGCCAAAGGGGCAGGTCGTC
droRho1 scf7180000778020:7157-7204 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGGGTGGTATAAAGGCAAAGTCAAAATAGTGGCATGCCAAGA--------AGTC
droTak1 scf7180000410739:21413-21522 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCGCAGAAATGGCCAAGGACAATATCCTTCTAGGAGTCCTGGACCAAGGCGACACAGAAGGAAGAATACCGAGGAACCAGTGGAAGTG-----------------------------------------------------------------------GGT-----------AGCGTTGAGGTGATAGTG--------------------
droYak3 v2_chrUn_700:45527-45576 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGACGTGGGATGGTTCCAAGGCAGCGTCAAGGTAATCGCCTGTGACGA--------CG--

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
TG----------------GACCACAGCGACGGTCCTGCCCGACTA-----CCAGCCAGCCAAAGCTGGCAAGTGTGCAGCCAAGGCCCCAAGCAAGCGGCAACGCTCGCCGG--CA---GACACCACCACGCAAGTCCTA-------------------AGTCG--------------------------------GCCAAGAGGACGAAAA------C---CCTAAGCAATCGCTCGTTTGCCGAGGTGGCGAGACGAAAAACCCTCATTGGAGTCCTAGACAGGGGCTCCAAAGATGGGCAGATTCCTCGAAAAC--------------------GAGTTTCC----------------------------------------TTC--AGGAGTTGGGTGGCACCAAGGGAGAGTGAAAGCCATCGTCTGCCAAGA--------CGTCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................AGAGTGAAAGCCATCGTCTGC.................2111.001010000
..................................................................................................................................................................................................................................AGCAATCGCTCGTTTGCCGAGG..........................................................................................................................................................................................................2211.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................AAGGGAGAGTGAAAGCCATCGTCT...................2411.001010000
...................................................................................................................................................................................................................A------C---CCTAAGCAATCGCTCGTTTGCC..............................................................................................................................................................................................................2411.001010000
TG----------------GACCACAGCGACGGTCCTGCCCGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
............................................................................................................................................................................................................................................................................................................GCAGATTCCTCGAAAAC--------------------GAGTTTCC----------------------------------------.................................................................2511.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGTGAAAGCCATCGTCTGCCA...............2411.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGTGAAAGCCATCGTCTGCC................2311.001010000
.............................................................................................................................ACCACGCAAGTCCTA-------------------AGTCG--------------------------------GCCAAG........................................................................................................................................................................................................................................................2611.001010000
.....................................................................................CCCCAAGCAAGCGGCAACGCTCG......................................................................................................................................................................................................................................................................................................................................................23200.408080000
.............................CGGTCCTGCCCGACTA-----CCAGCCA.........................................................................................................................................................................................................................................................................................................................................................................................................2360.171010000
................................TCCTGCCCGACTA-----CCAGCCAGCCAAAGC.................................................................................................................................................................................................................................................................................................................................................................................................28200.153030000
...........................................................................................................................................................................................................................................TCGTTTGCCGAGGTGGCGAGA..................................................................................................................................................................................................21170.122020000
.................................CCTGCCCGACTA-----CCAGCCAGCCAAAGC.................................................................................................................................................................................................................................................................................................................................................................................................27200.102020000
...................................TGCCCGACTA-----CCAGCCAGCCAAAGC.................................................................................................................................................................................................................................................................................................................................................................................................25200.102020000
......................................CCGACTA-----CCAGCCAGCCAAAGCTGGCA............................................................................................................................................................................................................................................................................................................................................................................................27200.051010000
.....................................................................................CCCCAAGCAAGCGGCAAC...........................................................................................................................................................................................................................................................................................................................................................18200.051010000
...........................................................................................................................................................................................................................................TCGTTTGCCGAGGTGGCGAG...................................................................................................................................................................................................20200.051010000
dp5
TG----------------GACCACAGCGACGGTCCTGCCCGACTA-----CCAGCCAGCCAAAGCTGGCAAGTGTGCAGCCAAGGCCCCAAGCAAGCGGCAACGCTCGCCGG--CA---GACACCTTCACGCAAGTCCTA-------------------AGTCG--------------------------------GCCAAGAGGACGAAAA------C---CCTAAGCAATCGCTCGTTTGCCGAGGTGGCGAGACGAAAAACCCTCATTGGAGTCCTAGACAGGGGCTCCAAAGATGGGCAGATTCCTCGAGACAAGTGGCACCTCATGGAAAACGAGTTTCC----------------------------------------TTC--AGGAGTTGGGTGGCACCAAGGGAGAGTGAAAGCCATCGTCTGCCAAGA--------CGTCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGTGAAAGCCATCGTCTG..................2112.0020200000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGTGAAAGCCATCGTCTGCCA...............2412.0020200000000
.....................................................................................CCCCAAGCAAGCGGCAACGCTCG......................................................................................................................................................................................................................................................................................................................................................23171.242101910001000
................................................................................................................................................................................................................................TAAGCAATCGCTCGTTTGCCGAGG..........................................................................................................................................................................................................2411.0010000000100
.........................................................................................................................................................................................................................................................................................................TGGGCAGATTCCTCGAGACAAGTGGC...............................................................................................................................2611.0010000000010
..........................................................................................................................................................................................................................................................GCGAGACGAAAAACCCTCATTG..................................................................................................................................................................................2211.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGTGAAAGCCATCGTCTGCC................2311.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGTGAAAGCCATCGTCTGC.................2211.0010100000000
..................................................................................................................................................................................................................................................................................GTCCTAGACAGGGGCTCCAAAGATGG......................................................................................................................................................2611.0010100000000
..........................................................................................................................................TA-------------------AGTCG--------------------------------GCCAAGAGGACGAAAA------C---CC..................................................................................................................................................................................................................................2611.0010100000000
.................................................................................................................................................................TCG--------------------------------GCCAAGAGGACGAAAA------C---CC..................................................................................................................................................................................................................................2211.0010100000000
....................................................................................................................................................................................................................................................................................................................CTCGAGACAAGTGGCACCTCATG.......................................................................................................................2311.0010100000000
.....................................................................................CCCCAAGCAAGCGGCAACGC.........................................................................................................................................................................................................................................................................................................................................................20190.631201200000000
..................................................................................................................................................................................................................................................................................GTCCTAGACAGGGGCTCCAAAG..........................................................................................................................................................2220.5010100000000
..................................................................................................................................................................................................................................................................................GTCCTAGACAGGGGCTCCAAAGA.........................................................................................................................................................2320.5010100000000
...................................TGCCCGACTA-----CCAGCCAGCCAAAGC.................................................................................................................................................................................................................................................................................................................................................................................................25110.4550500000000
.....................................................................................CCCCAAGCAAGCGGCAACGCTC.......................................................................................................................................................................................................................................................................................................................................................22180.4480500000300
......................................CCGACTA-----CCAGCCAGCCAAAGC.................................................................................................................................................................................................................................................................................................................................................................................................22140.3650500000000
...................................TGCCCGACTA-----CCAGCCAGCCAAAG..................................................................................................................................................................................................................................................................................................................................................................................................24120.3340400000000
................................TCCTGCCCGACTA-----CCAGCCAGCC......................................................................................................................................................................................................................................................................................................................................................................................................23130.3140400000000
......................................CCGACTA-----CCAGCCAGCCAAAGCT................................................................................................................................................................................................................................................................................................................................................................................................23140.2940400000000
................................TCCTGCCCGACTA-----CCAGCCAGCCAAAGC.................................................................................................................................................................................................................................................................................................................................................................................................28110.2730300000000
.....................................................................................CCCCAAGCAAGCGGCAACGCT........................................................................................................................................................................................................................................................................................................................................................21190.2650500000000
............................................................................................................................................................................................................................................................................ATTGGAGTCCTAGACAGGGGC.................................................................................................................................................................21130.2330300000000
.....................................................................................CCCCAAGCAAGCGGCAACG..........................................................................................................................................................................................................................................................................................................................................................19190.2140400000000
..............................................................................................................................................................................................................................................................................TGGAGTCCTAGACAGGGGCT................................................................................................................................................................20110.1820200000000
..................................................................................AGGCCCCAAGCAAGCGGCAAC...........................................................................................................................................................................................................................................................................................................................................................21180.1730201000000
............................................................................CAGCCAAGGCCCCAAGCAAGCGG...............................................................................................................................................................................................................................................................................................................................................................23130.1520200000000
.................................CCTGCCCGACTA-----CCAGCCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................21130.1520200000000
............................................................................CAGCCAAGGCCCCAAGCAAGC.................................................................................................................................................................................................................................................................................................................................................................21130.1520200000000
.............................................................................................................................................................................................................................................................................TTGGAGTCCTAGACAGGGGC.................................................................................................................................................................20130.1520100001000
............................................................................CAGCCAAGGCCCCAAGCAAGCGGCAAC...........................................................................................................................................................................................................................................................................................................................................................27130.1520010000100
..............................................................................GCCAAGGCCCCAAGCAAGCGGCAACG..........................................................................................................................................................................................................................................................................................................................................................26140.1420000000200
...............................................................................CCAAGGCCCCAAGCAAGCGG...............................................................................................................................................................................................................................................................................................................................................................20140.1420000000020
................................TCCTGCCCGACTA-----CCAGCCAG........................................................................................................................................................................................................................................................................................................................................................................................................21150.1320200000000
................................................................................CAAGGCCCCAAGCAAGCGGC..............................................................................................................................................................................................................................................................................................................................................................20150.1320101000000
........................................GACTA-----CCAGCCAGCCAAAGC.................................................................................................................................................................................................................................................................................................................................................................................................20160.1320200000000
.............................................................................................................................................................................................................................................................................TTGGAGTCCTAGACAGGGGCT................................................................................................................................................................21110.0910100000000
.................................CCTGCCCGACTA-----CCAGCCAGCCAAAG..................................................................................................................................................................................................................................................................................................................................................................................................26120.0810100000000
...................................TGCCCGACTA-----CCAGCCAGCCAAA...................................................................................................................................................................................................................................................................................................................................................................................................23120.0810100000000
.............................................................................AGCCAAGGCCCCAAGCAAGCGG...............................................................................................................................................................................................................................................................................................................................................................22130.0810100000000
............................................................................CAGCCAAGGCCCCAAGCAAGCGGCAAA...........................................................................................................................................................................................................................................................................................................................................................27130.0810100000000
............................................................................CAGCCAAGGCCCCAAGCAAGCGGCAA............................................................................................................................................................................................................................................................................................................................................................26130.0810000000100
............................................................................................................................................................................................................................................................................ATTGGAGTCCTAGACAGGGG..................................................................................................................................................................20130.0810100000000
................................TCCTGCCCGACTA-----CCAGCCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................22130.0810100000000
............................................................................................................................................................................................................................................................................ATTGGAGTCCTAGACAGGGGT.................................................................................................................................................................21130.0810100000000
............................................................................CAGCCAAGGCCCCAAGCAAGCG................................................................................................................................................................................................................................................................................................................................................................22130.0810100000000
...................................TGCCCGACTA-----CCAGCCAGCCA.....................................................................................................................................................................................................................................................................................................................................................................................................21130.0810100000000
............................................................................CAGCCAAGGCCCCAAGCAAGCGGC..............................................................................................................................................................................................................................................................................................................................................................24130.0810000000010
...............................................................................CCAAGGCCCCAAGCAAGCGGCAA............................................................................................................................................................................................................................................................................................................................................................23140.0710100000000
...............................................................................CCAAGGCCCCAAGCAAGCGGC..............................................................................................................................................................................................................................................................................................................................................................21140.0710000000001
......................................CCGACTA-----CCAGCCAGCCAAAGCTA...............................................................................................................................................................................................................................................................................................................................................................................................24140.0710100000000
......................................CCGACTA-----CCAGCCAGCCAAAGCTGG..............................................................................................................................................................................................................................................................................................................................................................................................25140.0710100000000
...............................................................................CCAAGGCCCCAAGCAAGCGGCAACA..........................................................................................................................................................................................................................................................................................................................................................25140.0710100000000
........................................GACTA-----CCAGCCAGCCAAAGCTG...............................................................................................................................................................................................................................................................................................................................................................................................22150.0710100000000
......................................CCGACTA-----CCAGCCAGCCAAAG..................................................................................................................................................................................................................................................................................................................................................................................................21150.0710100000000
................................................................................CAAGGCCCCAAGCAAGCGG...............................................................................................................................................................................................................................................................................................................................................................19150.0710000000010
................................TCCTGCCCGACTA-----CCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................18160.0610100000000
.........................................ACTA-----CCAGCCAGCCAAAGC.................................................................................................................................................................................................................................................................................................................................................................................................19160.0610000010000
..................................................................................AGGCCCCAAGCAAGCGGCAACG..........................................................................................................................................................................................................................................................................................................................................................22180.0610000000100
........................................................................................................................................................................................................................................CGCTCGTTTGCCGAGGTGG.......................................................................................................................................................................................................19190.0510100000000
........................................................................................................................................................................................................................................CGCTCGTTTGCCGAGGTGGCGAG...................................................................................................................................................................................................23190.0510100000000
..........................................................................................................................................................................................................................................CTCGTTTGCCGAGGTGGCGT....................................................................................................................................................................................................20200.0510100000000
..........................................................................................................................................................................................................................................CTCGTTTGCCGAGGTGGCGAG...................................................................................................................................................................................................21200.0510000010000
........................................................................................................................................................................................................................................CGCTCGTTTGCCGAGGTGGA......................................................................................................................................................................................................20200.0510100000000
droGri2
CC----------------AGGC------------------------------------------------------------------------------------------------------------------------------AAAAAGGCAGCGCTTGCAGGAAGCACACGGACCCGTTGCA-----------------AAACGGGCCAAGATGCAGCAGGG---AAGGTCCTCTGCTGACATTGCCAAGGAGAGAATCCTTATAGGGATCCTTGACAAGGGAAACAAGGACGGAAGAATCCCAAGAAATCAGTGGAAGTGGGTGTCCAA-----TGCCTGAAGCTATTAAGCAAAGCGGCT--GGGTCACCACCGGTATGCAGGGATGCTGGGTGGTACCAGGGTAACACGAAGGTTATCGCCTGCTAAGA--------CGCTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
GGCTGAGATCATAAATTGGGC---GAGGGAAATCCTGCCTGACTTTTCTTTCAGCCAGCAAAAGC----GGATGTGAGACTGGATCC-GA---------AGAAGCCGACAGAAGTAGGCGACTCTGCCAAGGATAGAGCACAAAGTGCGAAGAGGCAGAGGTCGACGGAC-----------GGTGGAA-----------------AAAAAGGTGCAGACGCAACAGAGCAACAGATCCTTCGCAGAGGTTACTAAGGGCAGGACCATCATTGGGGTCGTTGACAACGGCTCCAAAGATGGCCTGATCCCCAAGGAGCTTTGGCGGAGGGTGGTGAACGAGCTGCATGGTGCTAAGATGCTCAAGAGCGGAGGACCTCCACCG---------------------------------------------GACTGCAAAGA--------CG--SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................................................................................................................................GCTCCAAAGATGGCCTGATCCC.............................................................................................................................................22201.05210210000
.........................................................................................................................................................GGCAGAGGTCGACGGAC-----------GGTGG........................................................................................................................................................................................................................................................................22200.55111100000
................................................................................................................................................................................................................................................................................................CTCCAAAGATGGCCTGATCCCC............................................................................................................................................22200.50100100000
................................................................................................................................................................................................................................................................................................................................................................................GAGGACCTCCACCG---------------------------------------------GACTGCAAAGA--------C...2620.501100000
.......................................................................................................GCCGACAGAAGTAGGCGACTCTGC...................................................................................................................................................................................................................................................................................................................................24200.5010910000
...............................................................................................................................................................................................................................................................................................GCTCCAAAGATGGCCTGATCCCCAA..........................................................................................................................................25200.408800000
.........................................................................................................................................................................................................................................................TACTAAGGGCAGGACCATCATTGGGG...............................................................................................................................................................................26200.306600000
................................................................................................................................................................................................................................................................................................CTCCAAAGATGGCCTGATCCC.............................................................................................................................................21200.255320000
...............................................................................................................................................................................................................................................................................................GCTCCAAAGATGGCCTGATCC..............................................................................................................................................21200.204040000
................................................................................................................................................................................................................................................................................................CTCCAAAGATGGCCTGATCCCCAA..........................................................................................................................................24200.204310000
.......................................................................................................GCCGACAGAAGTAGGCGACTCTGCCAAG...............................................................................................................................................................................................................................................................................................................................28200.204400000
................................................................................................................................................................................................................................................................................................CTCCAAAGATGGCCTGATCCCCAAGG........................................................................................................................................26200.204400000
...............................................................................................................................................................................................................................CAGAGCAACAGATCCTTCGCAG.............................................................................................................................................................................................................22120.172200000
....................................................................................................................................................................................................................................................................................................................................GAGGGTGGTGAACGAGCTGCATGG......................................................................................................24200.153300000
................................................................................................................................................................................................................................................................................................CTCCAAAGATGGCCTGATCCCCAAGGAGC.....................................................................................................................................29200.153300000
..........................................................................................................................................................................................................................CGCAACAGAGCAACAGATCCTTCGCA..............................................................................................................................................................................................................26100.101100000
............................................................................................................................................................................................................................................................TAAGGGCAGGACCATCATTGGGGT..............................................................................................................................................................................24200.102020000
.........................................................................................................................................................................................................................................................TACTAAGGGCAGGACCATCATTGGGGT..............................................................................................................................................................................27200.102200000
.......................................................................................................................................................................................................................................................................................................GATGGCCTGATCCCCAAGGAGC.....................................................................................................................................22200.102200000
....................................................................................................................................................................................................................................................................................................................................GAGGGTGGTGAACGAGCTGCATG.......................................................................................................23200.102200000
...............................................................................................................................................................................................................................CAGAGCAACAGATCCTTCGCAGAGGT.........................................................................................................................................................................................................26100.101001000
................................................................................TGGATCC-GA---------AGAAGCCGACAGAAG................................................................................................................................................................................................................................................................................................................................................24200.102110000
...................................................................................ATCC-GA---------AGAAGCCGACAGAAGTAGG............................................................................................................................................................................................................................................................................................................................................25200.102020000
..........................................................................................................................................................................................................................................................ACTAAGGGCAGGACCATCATTGGG................................................................................................................................................................................24200.102200000
..........................................................................................................................................................................................................................................................ACTAAGGGCAGGACCATCATTGG.................................................................................................................................................................................23200.102200000
.................................................................................................................................................................................................................................GAGCAACAGATCCTTCGCAGAGG..........................................................................................................................................................................................................23110.091010000
.................................................................................................................................................................................................................................GAGCAACAGATCCTTCGCAGAGGT.........................................................................................................................................................................................................24110.091001000
...............................................................................................................................................................................................................................CAGAGCAACAGATCCTTCGCAGT............................................................................................................................................................................................................23120.081100000
...............................................................................................................................................................................................................AAAGGTGCAGACGCAACAGAGCAACAGA.......................................................................................................................................................................................................................28190.051000010
....................................................................................................................................................................................................................................................................................................................................GAGGGTGGTGAACGAGCTGCAT........................................................................................................22200.051010000
.............................................................................................................................................................................................................................................................................................................CTGATCCCCAAGGAGCTTTGGCGGA............................................................................................................................25200.051000001
......................................................................................................................................................................................................................................................................................................................................................................CTCAAGAGCGGAGGACCTCCT.......................................................................21200.051100000
....................................................................................TCC-GA---------AGAAGCCGACAGAAGTAGGC...........................................................................................................................................................................................................................................................................................................................................25200.051010000
......................................................................................................................................................................................................................................................GGTTACTAAGGGCAGGACCATCATTG..................................................................................................................................................................................26200.051100000
........................................................................TGTGAGACTGGATCC-GA---------AGAAGCC........................................................................................................................................................................................................................................................................................................................................................24200.051010000
.........................................................................................................................................................GGCAGAGGTCGACGGAC-----------GG...........................................................................................................................................................................................................................................................................19200.051100000
.......................................................................................................................................................GAGGCAGAGGTCGACGGAC-----------GGT..........................................................................................................................................................................................................................................................................22200.051100000
.....................................................................................................................................................................................................................................................................................................................................AGGGTGGTGAACGAGCTGCATG.......................................................................................................22200.051100000
.........................................................................................................................................................................................................................................................................ATCATTGGGGTCGTTGACAACGGC.................................................................................................................................................................24200.051100000
......................................................................................................................................................................................................................................................................................................................................GGGTGGTGAACGAGCTGCATG.......................................................................................................21200.051100000
......................................................................................................................................................................................................................................................GGTTACTAAGGGCAGGACCATCAT....................................................................................................................................................................................24200.051100000
................................................................................................................................................................................................................................................................GGCAGGACCATCATTGGGGTCGTTG.........................................................................................................................................................................25200.051100000
...............................................................................................................................................................................................................................................................................................................................TGGCGGAGGGTGGTGAACGAGCTGCA.........................................................................................................26200.051100000
......................................................................................................AGCCGACAGAAGTAGGCGACTCTGC...................................................................................................................................................................................................................................................................................................................................25200.051100000
...................................................................................................................................................................................................................................................................AGGACCATCATTGGGGTCGTTG.........................................................................................................................................................................22200.051100000
..............................................................................................................................................................................................................................................................................................................................TTGGCGGAGGGTGGTGAACGAG..............................................................................................................22200.051100000
............................................................................................................................................................................................................................................................................ATTGGGGTCGTTGACAACGGC.................................................................................................................................................................21200.051001000
.......................................................................................................GCCGACAGAAGTAGGCGACTCTGCC..................................................................................................................................................................................................................................................................................................................................25200.051100000
............................................................................................................................................................................................................................................................TAAGGGCAGGACCATCATTGGG................................................................................................................................................................................22200.051001000
....................................................................................................................................................................................................................................................GAGGTTACTAAGGGCAGGACCATCA.....................................................................................................................................................................................25200.051100000
.............................................................................................................................................................................................................................................................AAGGGCAGGACCATCATTGGGG...............................................................................................................................................................................22200.051001000
........................................................................................................................................AGCACAAAGTGCGAAGAGGCAGAGG.................................................................................................................................................................................................................................................................................................25200.051010000
...............................................................................................................................................................................................................................................TCGCAGAGGTTACTAAGGGCAGG............................................................................................................................................................................................23200.051100000
..........................................................................TGAGACTGGATCC-GA---------AGAAGCC........................................................................................................................................................................................................................................................................................................................................................22200.051100000
.......................................................................................................GCCGACAGAAGTAGGCGACTCTGCCAA................................................................................................................................................................................................................................................................................................................................27200.051100000
..........................................................................TGAGACTGGATCC-GA---------AGAAGCCGACAGA..................................................................................................................................................................................................................................................................................................................................................28200.051100000
..........................................................................TGAGACTGGATCC-GA---------AGAA...........................................................................................................................................................................................................................................................................................................................................................19200.051100000
.....................................................................................CC-GA---------AGAAGCCGACAGAAGTAG.............................................................................................................................................................................................................................................................................................................................................22200.051100000
........................................................................................................................................................................................................................................................................................................................................................................CAAGAGCGGAGGACCTCCACC.....................................................................21200.051010000
....................C---GAGGGAAATCCTGCCTGACT......................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
..............................................................................................................................................................................................................................................TTCGCAGAGGTTACTAAGGGC...............................................................................................................................................................................................21200.051100000
......................................................................................................................................................................................................................................................GGTTACTAAGGGCAGGACCATCA.....................................................................................................................................................................................23200.051100000
............................................................................................................................TGCCAAGGATAGAGCACAAAGTGC..............................................................................................................................................................................................................................................................................................................24200.051100000
.............................................................................................................................................................................................................................................................AAGGGCAGGACCATCATTGG.................................................................................................................................................................................20200.051100000
.............................................................................................................................................................................................................................................................................................................................TTTGGCGGAGGGTGGTGAACGAG..............................................................................................................23200.051010000
................................................................................................................................................................................................................................................CGCAGAGGTTACTAAGGGCAGGACCA........................................................................................................................................................................................26200.051100000
..........................................................................TGAGACTGGATCC-GA---------AGAAGCCGAC.....................................................................................................................................................................................................................................................................................................................................................25200.051100000
..............................................................................................................................................AAGTGCGAAGAGGCAGAGGTCGACGG..........................................................................................................................................................................................................................................................................................26200.051100000
.........................................................................................................................................................GGCAGAGGTCGACGGAC-----------GGTGGA.......................................................................................................................................................................................................................................................................23200.051100000
...................................................................................................................................................................................................................................................................................................CAAAGATGGCCTGATCCCCAAGGAGCT....................................................................................................................................27200.051100000
........................................................................................................................................................................................................................................................................................................................................GTGGTGAACGAGCTGCATGG......................................................................................................20200.051100000
..........................................................................................................................................CACAAAGTGCGAAGAGGCAGAGG.................................................................................................................................................................................................................................................................................................23200.051010000
..........................................................................................................................................................................................................................................................................................................................................................................AGAGCGGAGGACCTCCACCG---------------------------------------------GACT...................24200.051100000
.......................................................................................................................................................................................................................................................GTTACTAAGGGCAGGACCATCATTG..................................................................................................................................................................................25200.051100000
.................................................................................................................................................................................................................................................................................................TCCAAAGATGGCCTGATCCCCAAGGAGCT....................................................................................................................................29200.051100000
.....................................................................................................................................................................................................................................................................................................................................AGGGTGGTGAACGAGCTGC..........................................................................................................19200.051100000
...............................................................................................................................................................................................................................................................................................................GATCCCCAAGGAGCTTTGGCGGA............................................................................................................................23200.051000001
..........................................................................................................................................................................................................................................................ACTAAGGGCAGGACCATCATTGGGGT..............................................................................................................................................................................26200.051100000
................................................................................TGGATCC-GA---------AGAAGCCGACAGAAGTAG.............................................................................................................................................................................................................................................................................................................................................27200.051100000
..................................................................................GATCC-GA---------AGAAGCCGACAGAAGTAGG............................................................................................................................................................................................................................................................................................................................................26200.051100000
...........................................................................................................................CTGCCAAGGATAGAGCACAAAGTGT..............................................................................................................................................................................................................................................................................................................25200.051100000
.....................................................................................................................................................................................................................................................................................................................CAAGGAGCTTTGGCGGAGGGTGG......................................................................................................................23200.051100000
...................................................................................................................................................................................................................................................................................................CAAAGATGGCCTGATCCCCAAG.........................................................................................................................................22200.051100000
.................................................................................................................................................................................................................................................................................................................................GCGGAGGGTGGTGAACGAGCT............................................................................................................21200.051100000
................................................................................................................................................................................................................AAGGTGCAGACGCAACAGAGC.............................................................................................................................................................................................................................21200.051001000
...........................................................................................................................CTGCCAAGGATAGAGCACAAAGT................................................................................................................................................................................................................................................................................................................23200.051100000
.........................................................................................................................................................................................................................................................................................................................................TGGTGAACGAGCTGCATGG......................................................................................................19200.051000010
...................................................................................................................................................................................................................................................................................................................CCCAAGGAGCTTTGGCGGAGGG.........................................................................................................................22200.051100000
.................................................................................................................................................................................................................................................GCAGAGGTTACTAAGGGCAGGAC..........................................................................................................................................................................................23200.051100000
.................................................................................................................................................................................................................................................GCAGAGGTTACTAAGGGCAGGACC.........................................................................................................................................................................................24200.051100000
.......................................................................................................................................................................................................................................................GTTACTAAGGGCAGGACCATCATT...................................................................................................................................................................................24200.051010000
...................................................................................ATCC-GA---------AGAAGCCGACAGAAGTAGGC...........................................................................................................................................................................................................................................................................................................................................26200.051100000
.......................................................................................................................................................................................................................................................................................................................................................................TCAAGAGCGGAGGACCTCCACCG---------------------------------------------.......................23200.051100000
.......................................................................................................GCCGACAGAAGTAGGCGACTCT.....................................................................................................................................................................................................................................................................................................................................22200.051100000
.............................................................................................................................GCCAAGGATAGAGCACAAAGTGCGA............................................................................................................................................................................................................................................................................................................25200.051100000
.......................................................................................................................................................................................................................................CAGATCCTTCGCAGAGGTTACTAAGGG................................................................................................................................................................................................27200.051100000
......................................................................................................................................................................................................................................................................ACCATCATTGGGGTCGTTGACAA.....................................................................................................................................................................23200.051100000
......................................................................................................................................AGAGCACAAAGTGCGAAGAGGCAG....................................................................................................................................................................................................................................................................................................24200.051100000
..............................................................................................................................................................................................................................................TTCGCAGAGGTTACTAAGGGCAGGACA.........................................................................................................................................................................................27200.051100000
droBip1
G------ATTATTAAGTGGGC---AAGGGAGGTCCTGCCCGCCTT-----CAAA----------CCGGCGGGTGTGAGGCTGGGGCC-GA---------GGAAGCTTGCTGGGTCA---GATCCTGCCAAGGAGATCGCA---------AACAGTCAGAAATCAACGGAG-----------GGAGGAGCCCCCCAAGCCAAGAAGAGGATGGCCAAGCCGCAGCCGTCCAACCGCTCGCTTGCCGAAGTGACGAAGGGAAGAACCTTTC-----GTCCTGGACAAGGGATCCTAAGATGGGCTCATCCCTAAGGAAC------------------------TTCC----------------------------------------TGCGAAGACGCAGGATGGTATCAAGGTAGCGTCAAGGGAATTGCCTGCCAAAGGGGCAGGTCGTCSizeHit CountTotal NormTotal
No Reads
droRho1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGGGTGGTATAAAGGCAAAGTCAAAATAGTGGCATGCCAAGA--------AGTCSizeHit CountTotal NormTotal
No Reads
droTak1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCGCAGAAATGGCCAAGGACAATATCCTTCTAGGAGTCCTGGACCAAGGCGACACAGAAGGAAGAATACCGAGGAACCAGTGGAAGTG-----------------------------------------------------------------------GGT-----------AGCGTTGAGGTGATAGTG--------------------SizeHit CountTotal NormTotal
No Reads
droYak3
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGACGTGGGATGGTTCCAAGGCAGCGTCAAGGTAATCGCCTGTGACGA--------CG--SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................ATGGTTCCAAGGCAGCGTCAAGG............................23100.70707000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................ATGGTTCCAAGGCAGCGTCAAGGTAA.........................2620.50101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................ATGGTTCCAAGGCAGCGTCAAG.............................22100.20202000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................GATGGTTCCAAGGCAGCGTCAAGG............................24100.10101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................ATGGTTCCAAGGCAGCGTCAA..............................21100.10101000000000

Generated: 06/08/2015 at 05:06 PM