ID:

dpe_2061

 Coordinate:

scaffold_72:174774-174924 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.0 -11.7 -11.3 -11.1

Flybase annnotation

CDS [Dper\GL15379-cds]; exon [dper_GLEANR_16484:3]; intron [Dper\GL15379-in]

Repeatable elements

NameClassFamilyStrand
BilboLINELOA-
mature
  1. scaffold_72:170239-170259 -
  2. dpe_2061  scaffold_72:174810-174830 -
  3. scaffold_72:184097-184117 -
star
  1. scaffold_72:170203-170227 -
  2. dpe_2061  scaffold_72:174774-174798 -
  3. scaffold_72:184061-184085 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AGGAGGATAGTTGTATGCCTATGGCCAGCTGCAAGCTCATCATAAAAGAGCAGTACATGCGACTAACAGACAACAAGTGGCAAATAGGGCCACGTTGTCGCACAGCTCGGCAAACATGGCCGACCATAGATAAGAAGCGCACCGCAGAGCTCTGCAAAGTAGGCAGGGAAAGGTGCAGCGCGGTCATACGTTCCTTAACAGGACACTGGCTAGTAGGCACTCACGCAAGTAGGCTGGGTGCCCCATACAAC
************************************************************************************************************************************************....................((((.((.(((..((...))..))).)))))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V111
male body		 M021
embryo
 V042
embryo
 V050
head
 V057
head
....................................................................................................................................................................................................AACAGGACACTGGCTAGTAGG.................................. 21 0 3 0.33 1 0 1 0 0 0 0
................................................................................................................................................CAGAGCTCTGCAAAGTAGGCA...................................................................................... 21 0 3 0.33 1 0 1 0 0 0 0
............................................................................................................................................................................................................................TCACGCAAGTAGGCTGGGT............ 19 0 3 0.33 1 0 1 0 0 0 0
..................................................................................................................................................................................................................TAGTAGGCCCTCACGCAAGTAGGC................. 24 1 3 0.33 1 1 0 0 0 0 0
................................................................................................................................................................................AGCGCGGTCATACGTTCCTTAACAG.................................................. 25 0 3 0.33 1 1 0 0 0 0 0
...............................................................TAACAGACAACAAGTGGCAAATAGGGC................................................................................................................................................................. 27 0 10 0.30 3 2 1 0 0 0 0
......................................................................................................................................................TCTGCAAAGTAGGCAGGGAACGGTGC........................................................................... 26 1 4 0.25 1 1 0 0 0 0 0
......................................................................................................................................................TCTGCAAAGTAGGCAGGGAACGG.............................................................................. 23 1 4 0.25 1 1 0 0 0 0 0
......................................................................................................................................................TCTGCAAAGTAGGCAGGGAACGGTG............................................................................ 25 1 4 0.25 1 1 0 0 0 0 0
......................................................................................................................................................TCTGCAAAGTAGGCAGGGAACGGT............................................................................. 24 1 4 0.25 1 1 0 0 0 0 0
...........................................................................................................................CCATAGATAAGAAGCGCACCGCAGA....................................................................................................... 25 0 6 0.17 1 0 1 0 0 0 0
...........................................................................................................................CCATAGATGAGAAGCGCACCGCA......................................................................................................... 23 1 6 0.17 1 1 0 0 0 0 0
......................................................ACATGCGACTAACAGACAAC................................................................................................................................................................................. 20 0 12 0.17 2 0 0 2 0 0 0
..............................................................................................................................................CGCAGGGCTCTGCGAAGT........................................................................................... 18 2 8 0.13 1 1 0 0 0 0 0
..................................................................................................................................................................GCAGGTAAGGGGGCAGCGCG..................................................................... 20 3 8 0.13 1 1 0 0 0 0 0
.............................................................................................................................................................................................................................CACGCAAGTAGGCTGGGTGCC......... 21 0 9 0.11 1 0 1 0 0 0 0
................................................................................................................................................................AGGCAGGGAAAGGTGCAGC........................................................................ 19 0 20 0.10 2 0 2 0 0 0 0
..............................................AGAGCAGTACATGCGACTAACAGACAAC................................................................................................................................................................................. 28 0 12 0.08 1 1 0 0 0 0 0
.....................................CATCATAAAAGAGCAGTACATGCGACTA.......................................................................................................................................................................................... 28 0 15 0.07 1 1 0 0 0 0 0
......................................ATCATAAAAGAGCAGTACATGCGAC............................................................................................................................................................................................ 25 0 15 0.07 1 1 0 0 0 0 0
..........................................................................................................................................GCGCCGCAAAGCTCTGCAA.............................................................................................. 19 2 15 0.07 1 1 0 0 0 0 0
.......................................TCATAAAAGAGCAGTACATG................................................................................................................................................................................................ 20 0 17 0.06 1 0 1 0 0 0 0
.....................................................................................................................................................................GTGGAAGGTGCAGCGCGG.................................................................... 18 2 17 0.06 1 0 0 0 0 0 1
.....................................CATCATAAAAGAGCAGTACATGCG.............................................................................................................................................................................................. 24 0 17 0.06 1 1 0 0 0 0 0
...........................................................................................................................CCATAGATGAGAAGCGCACC............................................................................................................ 20 1 20 0.05 1 1 0 0 0 0 0
.................................................................................................TCGCACAGCTCGGCAAACATGG.................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................CCATAGATAAGAAGCGCA.............................................................................................................. 18 0 20 0.05 1 0 0 0 1 0 0
...............................................................................................................................................................TAGGCAGGGAAAGGTGTC.......................................................................... 18 2 20 0.05 1 0 1 0 0 0 0
..................................................................................................................CATGGCCGACCATAGATAAG..................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................................................................................CAGGACACTGGCTAGTAGG.................................. 19 0 20 0.05 1 0 0 0 1 0 0
......................................................................................................................................................................................................................................AACCCGGGTGCCCCATACA.. 19 3 20 0.05 1 0 0 0 0 1 0
.................................................................................................................................................................................................................................GAAGGAGGCTGGGTGACCC....... 19 3 20 0.05 1 0 0 0 0 1 0

Anti-sense strand reads

TCCTCCTATCAACATACGGATACCGGTCGACGTTCGAGTAGTATTTTCTCGTCATGTACGCTGATTGTCTGTTGTTCACCGTTTATCCCGGTGCAACAGCGTGTCGAGCCGTTTGTACCGGCTGGTATCTATTCTTCGCGTGGCGTCTCGAGACGTTTCATCCGTCCCTTTCCACGTCGCGCCAGTATGCAAGGAATTGTCCTGTGACCGATCATCCGTGAGTGCGTTCATCCGACCCACGGGGTATGTTG
**************************************************....................((((.((.(((..((...))..))).)))))).....************************************************************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V042
embryo
 V057
head
 V111
male body		 V050
head
............................................................................................................CCGTTTGTACCGGCTGGTATCTATT...................................................................................................................... 25 0 20 22.05 441 386 46 4 0 5 0
..............................................................................................................GTTTGTACCGGCTGGTATCTATT...................................................................................................................... 23 0 20 17.60 352 345 0 7 0 0 0
................................................................................GTTTATCCCGGTGCAACAGCGTGT................................................................................................................................................... 24 0 20 7.45 149 145 0 3 0 1 0
............................................................................................................CCGTTTGTACCGGCTGGTATCTAT....................................................................................................................... 24 0 20 4.80 96 88 4 4 0 0 0
.............................................................................................................CGTTTGTACCGGCTGGTATCTAT....................................................................................................................... 23 0 20 3.85 77 75 0 2 0 0 0
........................GGTCGACGTTCGAGTAGTATTTT............................................................................................................................................................................................................ 23 0 3 3.33 10 9 0 0 0 1 0
.............................................................................................................CGTTTGTACCGGCTGGTATCTATT...................................................................................................................... 24 0 20 2.95 59 0 0 50 4 5 0
.....................ACCGGTCGACGTTCGAGTAGTATTTT............................................................................................................................................................................................................ 26 0 3 2.67 8 8 0 0 0 0 0
.........................................................................................................................................................................TTCCACGTCGCGCCAGTATGCAAG.......................................................... 24 0 3 2.67 8 8 0 0 0 0 0
...............................................................................................................TTTGTACCGGCTGGTATCTATT...................................................................................................................... 22 0 20 2.45 49 49 0 0 0 0 0
.......................CGGTCGACGTTCGAGTAGTATTTT............................................................................................................................................................................................................ 24 0 3 2.33 7 7 0 0 0 0 0
..............................................................................................................GTTTGTACCGGCTGGTATCTAT....................................................................................................................... 22 0 20 2.25 45 45 0 0 0 0 0
................................................................................................................TTGTACCGGCTGGTATCTATT...................................................................................................................... 21 0 20 1.80 36 33 2 1 0 0 0
........................................................................................................CGAGCCGTTTGTACCGGCTGGTATCTAT....................................................................................................................... 28 0 20 1.80 36 35 1 0 0 0 0
................................................................................................................................................................TCCGTCCCTTTCCACGTCGCGCCAGT................................................................. 26 0 3 1.67 5 1 4 0 0 0 0
..................................................................................................................................................................CGTCCCTTTCCACGTCGCGCCAGT................................................................. 24 0 3 1.33 4 4 0 0 0 0 0
.........................................................................................................GAGCCGTTTGTACCGGCTGGTATCTAT....................................................................................................................... 27 0 20 1.05 21 18 3 0 0 0 0
..................................................................................TTATCCCGGTGCAACAGCGTGTCG................................................................................................................................................. 24 0 20 1.05 21 21 0 0 0 0 0
...................................................................................................................................................................GTCCCTTTCCACGTCGCGCCAGT................................................................. 23 0 3 1.00 3 3 0 0 0 0 0
...........................................................................................................................................................................CCACGTCGCGCCAGTATGCAAG.......................................................... 22 0 3 1.00 3 3 0 0 0 0 0
......................CCGGTCGACGTTCGAGTAGTATTTT............................................................................................................................................................................................................ 25 0 3 1.00 3 3 0 0 0 0 0
................................................................................GTTTATCCCGGTGCAACAGCGTG.................................................................................................................................................... 23 0 20 0.85 17 17 0 0 0 0 0
..................................................................................TTATCCCGGTGCAACAGCGTGT................................................................................................................................................... 22 0 20 0.70 14 12 0 2 0 0 0
.......................................................................................................................................................................CTTTCCACGTCGCGCCAGTATGCAAG.......................................................... 26 0 3 0.67 2 2 0 0 0 0 0
.............................................................................................................................................GGCGTCTCGAGACGTTTCATCCGT...................................................................................... 24 0 3 0.67 2 2 0 0 0 0 0
.................................................................................................................TGTACCGGCTGGTATCTATT...................................................................................................................... 20 0 20 0.60 12 9 3 0 0 0 0
................................................TCGTCATGTACGCTGATTG........................................................................................................................................................................................ 19 0 13 0.54 7 0 7 0 0 0 0
................................................................................GTTTATCCCGGTGCAACAGCGT..................................................................................................................................................... 22 0 20 0.50 10 10 0 0 0 0 0
...........................................................................................................GCCGTTTGTACCGGCTGGTATCTAT....................................................................................................................... 25 0 20 0.50 10 9 1 0 0 0 0
........................................................................................................CGAGCCGTTTGTACCGGCTGGTATCTATT...................................................................................................................... 29 0 20 0.50 10 0 7 0 0 3 0
.............................................................................................................CGTTTGTACCGGCTGATATCTATT...................................................................................................................... 24 1 20 0.45 9 9 0 0 0 0 0
..................................................................................................................GTACCGGCTGGTATCTATT...................................................................................................................... 19 0 20 0.45 9 9 0 0 0 0 0
............................GACGTTCGAGTAGTATTTT............................................................................................................................................................................................................ 19 0 20 0.35 7 7 0 0 0 0 0
.............................................................................................................CGTTTGTACCGGCTGGTATCTA........................................................................................................................ 22 0 20 0.35 7 7 0 0 0 0 0
...............................................................................................................................................................................CTCGCGCCAGTCTGCAAGGAC....................................................... 21 3 3 0.33 1 0 0 0 1 0 0
...................................................................................................................................................................GTCCCTTTCCACGTAGCGCCAGT................................................................. 23 1 3 0.33 1 1 0 0 0 0 0
.....................ACCGGTCGACGTTCGAGTAGTAT............................................................................................................................................................................................................... 23 0 3 0.33 1 1 0 0 0 0 0
..................GATACCGGTCGACGTTCGAGTAGT................................................................................................................................................................................................................. 24 0 3 0.33 1 1 0 0 0 0 0
.............................................................................................................................................GGCGTCTCGAGACGTTTCAT.......................................................................................... 20 0 3 0.33 1 1 0 0 0 0 0
......................................................................................................................................................................CCTTTCCACGTCGCGCCAGTATGCAAG.......................................................... 27 0 3 0.33 1 1 0 0 0 0 0
..................................................................................................................................................................CGTCCCTTTCCACGTCGCGCCAG.................................................................. 23 0 3 0.33 1 1 0 0 0 0 0
................................................................................................................................................................................................GGAATTGTCCTGTGACCGATCATCCGT................................ 27 0 3 0.33 1 1 0 0 0 0 0
................................................................................................................................................................................TCGCGCCAGAATGCAGGGAT....................................................... 20 3 3 0.33 1 0 0 0 1 0 0
........................GGTCGACGTTCGAGTAGTATTTTC........................................................................................................................................................................................................... 24 0 3 0.33 1 1 0 0 0 0 0
..........................................................................................................................................................................................................................TGAGTGCGTTCCTCCCACCCT............ 21 3 3 0.33 1 0 0 0 1 0 0
...............................................................................................................................................................................CTCGCGCCAGTGTGCAAGGAC....................................................... 21 3 3 0.33 1 0 0 0 1 0 0
.....................................................................................................................................................................CCCTTTCCACGTCGCGCCAGTATGCAAG.......................................................... 28 0 3 0.33 1 1 0 0 0 0 0
.....................ACCGGTCGACGTTCGAGTAGTATTT............................................................................................................................................................................................................. 25 0 3 0.33 1 1 0 0 0 0 0
.......................................................................................................................................................................................................................CCGTGAGTGCGTTCATCCGAC............... 21 0 3 0.33 1 0 0 0 0 1 0
................................................................................................................................................................................TCGCGCCAGAGTGCAAGGAA....................................................... 20 2 3 0.33 1 0 0 0 1 0 0
.......................................................................................................................................................................CTTTCCACGTCGCGCCACTATGCAAG.......................................................... 26 1 3 0.33 1 1 0 0 0 0 0
.....................................................................................................................................CTTCGCGTGGCGTCTCGAGACGTTTC............................................................................................ 26 0 3 0.33 1 1 0 0 0 0 0
.......................CGGTCCACGTTCGAGTAGTATTTT............................................................................................................................................................................................................ 24 1 3 0.33 1 1 0 0 0 0 0
........................GGTCGACGTTCGAGTAGTATTT............................................................................................................................................................................................................. 22 0 3 0.33 1 1 0 0 0 0 0
.................................................................................................................................................................CCGTCCCTTTCCACGTCGCGCCAG.................................................................. 24 0 3 0.33 1 1 0 0 0 0 0
..................................................................................................................................................................TTTCCCTTTCCACGTCGCGCCAGT................................................................. 24 2 3 0.33 1 0 0 0 0 1 0
.................................................................................................................................................................CCGTCCCTTTCCACGTCGCGCCAGT................................................................. 25 0 3 0.33 1 1 0 0 0 0 0
........................................................................................................................................CGCGTGGCGTCTCGAGGCGTTTCAT.......................................................................................... 25 1 3 0.33 1 1 0 0 0 0 0
...........................................................................................................................................................................CCACGTCGCGCCAGTATGCAAGGAAT...................................................... 26 0 3 0.33 1 1 0 0 0 0 0
................................................................................GTTTATCCCGGTGCAGCAGCGTGT................................................................................................................................................... 24 1 20 0.30 6 6 0 0 0 0 0
................................................................................GTTTATCCCGGTGCAACAGCGTGTCG................................................................................................................................................. 26 0 20 0.30 6 6 0 0 0 0 0
...............................................................................................................................................................................CTCGCGCCAGTATTCAAGGAT....................................................... 21 3 4 0.25 1 0 0 0 1 0 0
...........................................................................................................................................................................................................................GAGTGCGTTCCTCCAACCC............. 19 2 4 0.25 1 0 0 0 1 0 0
.............................................................................................................TGTTTGTACCGGCTGGTATCTATT...................................................................................................................... 24 1 20 0.25 5 5 0 0 0 0 0
...................................................................................TATCCCGGTGCAACAGCGTGT................................................................................................................................................... 21 0 20 0.25 5 5 0 0 0 0 0
................................................................................................................TTGTACCGGCTGGTATCTAT....................................................................................................................... 20 0 20 0.25 5 5 0 0 0 0 0
..................................................................................................................................................CTCGAGTCGTTTCTTCCGTCACT.................................................................................. 23 3 4 0.25 1 0 0 0 1 0 0
........................................................................................................GGAGCCGTTTGTACCGGCTGGTATCTATT...................................................................................................................... 29 1 20 0.25 5 0 5 0 0 0 0
...................................................................................................................TACCGGCTGGTATCTATT...................................................................................................................... 18 0 20 0.20 4 1 3 0 0 0 0
........................................................................................................AGAGCCGTTTGTACCGGCTGGTATCTAT....................................................................................................................... 28 1 20 0.20 4 2 2 0 0 0 0
..................................................................................TTATCCCGGTGCAACAGCGTGTCGA................................................................................................................................................ 25 0 20 0.20 4 4 0 0 0 0 0
.......................................................GTACGCTGATTGTCTGTTGTTCACCGT......................................................................................................................................................................... 27 0 11 0.18 2 1 1 0 0 0 0
...................................................................................................................................................TCGAGTCGTTTCGTCCGTCACT.................................................................................. 22 3 6 0.17 1 0 0 0 1 0 0
...................................................................................................................................................TCGAGAAGTTTCGTCCGTCACT.................................................................................. 22 3 6 0.17 1 0 0 0 1 0 0
...................................................................................TATCCCGGTGCAACAGCGTGTCGA................................................................................................................................................ 24 0 20 0.15 3 3 0 0 0 0 0
................................................................................GTTTATCCCGGTGCATCAGCGTGT................................................................................................................................................... 24 1 20 0.15 3 3 0 0 0 0 0
.............................................................................................................CGTTTGTACCGGCTGGTATC.......................................................................................................................... 20 0 20 0.15 3 3 0 0 0 0 0
..........................................................................................................AACCGTTTGTACCGGCTGGTATCTATT...................................................................................................................... 27 1 20 0.15 3 3 0 0 0 0 0
....................................................................................ATCCCGGTGCAACAGCGTGT................................................................................................................................................... 20 0 20 0.15 3 2 0 0 0 1 0
...................................................................................TATCCCGGTGCAACAGCGTGTCG................................................................................................................................................. 23 0 20 0.15 3 3 0 0 0 0 0
............................................................................................................CAGTTTGTACCGGCTGGTATCTATT...................................................................................................................... 25 1 20 0.15 3 2 1 0 0 0 0
........................................................................................................CGAGCCGTTTGTACCGGCTGGTATCTA........................................................................................................................ 27 0 20 0.15 3 3 0 0 0 0 0
................................................................................................................TTGTACCGGCTGGTATCTATTCT.................................................................................................................... 23 0 20 0.15 3 3 0 0 0 0 0
.........................................................................................................GAGCCGTTTGTACCGGCTGGTATCTA........................................................................................................................ 26 0 20 0.15 3 3 0 0 0 0 0
.....................................................................................................................................CTTCGCGTGGCGTCTCGAGACGT............................................................................................... 23 0 7 0.14 1 1 0 0 0 0 0
................................................................................................................................................................................TCGCGCCAGACTGCAAGGAC....................................................... 20 3 7 0.14 1 0 0 0 0 0 1
.................................................................................................................................TATTCTTCGCGTGGCGTCTCGAGACGT............................................................................................... 27 0 7 0.14 1 1 0 0 0 0 0
................................................................................................................................................................................TCGTGCCAGACTGCAAGGAA....................................................... 20 3 8 0.13 1 0 0 0 1 0 0
.............................................................................................................................................................................GCGTCGCGCGAGTAAGCAAG.......................................................... 20 3 9 0.11 1 0 0 0 0 1 0
..........................................................................................................TGCCGTTTGTACCGGCTGGTATCTATT...................................................................................................................... 27 1 20 0.10 2 2 0 0 0 0 0
......................................................................................CCCGGTGCAACAGCGTGTCG................................................................................................................................................. 20 0 20 0.10 2 2 0 0 0 0 0
............................................................................................................CCGTTTGTACCGGCTTGTATCTAT....................................................................................................................... 24 1 20 0.10 2 2 0 0 0 0 0
.............................................................................................................CCGTTGTACCGGCTGGTATCTATT...................................................................................................................... 24 2 20 0.10 2 2 0 0 0 0 0
............................................................................................................CCGTTTGTACCGGCTGGTATCTATA...................................................................................................................... 25 1 20 0.10 2 2 0 0 0 0 0
........................................................................................................CGAGCCGTTTGTACCGGCTGGTAT........................................................................................................................... 24 0 20 0.10 2 2 0 0 0 0 0
...................................................................................................................................................................GTCCCTTTCCACGTCGCG...................................................................... 18 0 20 0.10 2 2 0 0 0 0 0
..........................................................................................................AGCCGTTTGTACCGGCTGGTATCTAT....................................................................................................................... 26 0 20 0.10 2 2 0 0 0 0 0
..........................................................................................GTGCAACAGCGTGTCGAGCCGTT.......................................................................................................................................... 23 0 20 0.10 2 2 0 0 0 0 0
..............................................................................................................GTTTGTACCGGCTAGTATCTAT....................................................................................................................... 22 1 20 0.10 2 2 0 0 0 0 0
..................................................................................TTATCCCGGTGCAACAGCGTGTCGAG............................................................................................................................................... 26 0 20 0.10 2 2 0 0 0 0 0
.........................................................................................................GAGCCGTTTGTACCGGCTGGTATCTATT...................................................................................................................... 28 0 20 0.10 2 0 0 2 0 0 0
..................................................................................TTATCCCGGTGCAACAGCGTGTC.................................................................................................................................................. 23 0 20 0.10 2 2 0 0 0 0 0
........................................................................................................CGAGCCGTTTGTACCGGCTCGTATCTAT....................................................................................................................... 28 1 20 0.10 2 2 0 0 0 0 0
............................................................................................................CCGTTTGTACCGGCTGGTATCTA........................................................................................................................ 23 0 20 0.10 2 2 0 0 0 0 0
..............................................................................AAGTTTATCCCGGTGCAACAGCGTGT................................................................................................................................................... 26 2 20 0.10 2 2 0 0 0 0 0
...........................................................................................................AACGTTTGTACCGGCTGGTATCTATT...................................................................................................................... 26 2 20 0.10 2 0 0 2 0 0 0
.............................................................................................................CGTTTGTACCGGCTGGTATCTATG...................................................................................................................... 24 1 20 0.10 2 2 0 0 0 0 0
.............................................................................AAAGTTTATCCCGGTGCAACAGCGTGT................................................................................................................................................... 27 2 20 0.10 2 2 0 0 0 0 0
.....................................................................................TCCCGGTGCAACAGCGTGT................................................................................................................................................... 19 0 20 0.10 2 2 0 0 0 0 0
.....................................................ATGTACGCTGATTGTCTGTTGTTCA............................................................................................................................................................................. 25 0 11 0.09 1 1 0 0 0 0 0
..........................................................CGCTGATTGTCTGTTGTTCACCGTT........................................................................................................................................................................ 25 0 11 0.09 1 1 0 0 0 0 0
......................................................TGTACGCTGATTGTCTGTTGTTCAC............................................................................................................................................................................ 25 0 11 0.09 1 1 0 0 0 0 0
.......................................................GTGCGCTGATTGTCTGTTGTTCACCGTT........................................................................................................................................................................ 28 1 12 0.08 1 1 0 0 0 0 0
.....................................................ATGTACGCTGATTGTCTGT................................................................................................................................................................................... 19 0 13 0.08 1 0 0 0 0 0 1
.................................................................................................................................................................................CGCGCCAGACTGCAAGGAC....................................................... 19 3 15 0.07 1 0 0 0 1 0 0
............................................................................CACCGTTTATACCGGTGCAACAGCGT..................................................................................................................................................... 26 1 18 0.06 1 1 0 0 0 0 0
...........................................................................TCACCGTTTATACCGGTGCAACAGCGTGT................................................................................................................................................... 29 1 18 0.06 1 1 0 0 0 0 0
......................................................................................CCCGGTGCAACAGCGTGT................................................................................................................................................... 18 0 20 0.05 1 1 0 0 0 0 0
.............................................................................AAAGTTTATCCCGGTGCAACAGCGTG.................................................................................................................................................... 26 2 20 0.05 1 1 0 0 0 0 0
..............................................................................................................GTTTGTACCGGCTGGTATCTATG...................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0
..............................................................................................................GTTTGTACCGGCTGGTATCTATTGT.................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0
.........................................................................................GGTGCAACAGCGTGTCGAG............................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0
.........................................................................................................GAGCCGTTTGTACCGGCTGTTATCTATT...................................................................................................................... 28 1 20 0.05 1 1 0 0 0 0 0
................................................................................GTTTATCCCGGTGCAACAGCTTGT................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0
................................................................................................................ATGTACCGGCTGGTATCTATT...................................................................................................................... 21 1 20 0.05 1 1 0 0 0 0 0
.............................................................................................................CGTTTGTACCGGCTGGTATCTATTCT.................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0
..............................................................................CCGTTTATCCCGCTGCAACAGCGTGT................................................................................................................................................... 26 1 20 0.05 1 0 0 1 0 0 0
.........................................................................................................TAGCCGTTTGTACCGGCTGGTATCTATT...................................................................................................................... 28 1 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................GGTATCTATTCTTCGCGTG............................................................................................................. 19 0 20 0.05 1 1 0 0 0 0 0
...............................................................................................................TTTGTACCGGCTGGTATCTA........................................................................................................................ 20 0 20 0.05 1 1 0 0 0 0 0
........................................................................................................CGAGCCGTTTGTACCGGCTTGTATCTAT....................................................................................................................... 28 1 20 0.05 1 1 0 0 0 0 0
.................................................................................................................................................................CCGTCCCTTTCCACGTCGCG...................................................................... 20 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................................AACGTTTGTACCGGCTGGTATCTAT....................................................................................................................... 25 2 20 0.05 1 1 0 0 0 0 0
........................................................................................................CGAGCCGTTTGTACCGGCTGTTATCTATT...................................................................................................................... 29 1 20 0.05 1 0 0 0 0 1 0
.........................................................................................................GAGTTGTTTGTACCGGCGGG.............................................................................................................................. 20 3 20 0.05 1 0 0 0 1 0 0
........................................................................................................................................................................................................................................CGACCCACGGGGTATGTT. 18 0 20 0.05 1 1 0 0 0 0 0
.............................................................................................................CGTTTGTACCGTCTGGTATCTATT...................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0
.........................................................................................................GAGCCGTTTGTACCGGCTGGTATCTATTC..................................................................................................................... 29 0 20 0.05 1 1 0 0 0 0 0
.............................................................................................................CGTTTGTCCCGGCTGGTATCTAT....................................................................................................................... 23 1 20 0.05 1 0 0 1 0 0 0
...............................................................................AGTTTATCCCGGTGCAACAGCGTGTC.................................................................................................................................................. 26 1 20 0.05 1 1 0 0 0 0 0
............................................................................................................ACGTTTGTACCGGCTGGTATCTAT....................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0
.........................................................................................................GAGCCGTTTGTACCGGCTGGTATC.......................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0
.............................................................................................................CGTTTGTCCCGGCTGGTATCTATT...................................................................................................................... 24 1 20 0.05 1 0 0 1 0 0 0
.............................................................................................................CGTGTGTACCGGCTGGTATCTATTC..................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0
.................................................................................ATTATCCCGGTGCAACAGCGTGT................................................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0
............................................................................................................AAGTTTGTACCGGCTGGTATCTATTC..................................................................................................................... 26 2 20 0.05 1 1 0 0 0 0 0
....................................................................................ATCCCGGTGCAACAGCGTGTCG................................................................................................................................................. 22 0 20 0.05 1 1 0 0 0 0 0
.................................................................................TTTATCCCGGTGCATCAGCGTGT................................................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0
.............................................................................................................CGTTTGTACCGGCGGGTAGCTATT...................................................................................................................... 24 2 20 0.05 1 0 0 0 1 0 0
...............................................................................AGTTTATCCCGGTGCAACAGCGTGT................................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0
................................................................................GTTTATCCCGGTGCAACAG........................................................................................................................................................ 19 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................................GCCGTTTGTACCGGCTCGTATCTAT....................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0
...........................................................................................................GCCGTTTGTACCGGCTGATATCTATT...................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0
.............................................................................................................CGTTTGTACCGGCTGGTATCTATA...................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0
..................................................................................ATATCCCGGTGCAACAGCGTGTCG................................................................................................................................................. 24 1 20 0.05 1 1 0 0 0 0 0
................................................................................GTGTATCCCGGTGCAACAGCGTGTCG................................................................................................................................................. 26 1 20 0.05 1 1 0 0 0 0 0
........................................................................................................AGAGCCGTTTGTACCGGCTGGTATCTATT...................................................................................................................... 29 1 20 0.05 1 1 0 0 0 0 0
................................................................................GTCTATCCCGGTGCAGCAGCGTGT................................................................................................................................................... 24 2 20 0.05 1 1 0 0 0 0 0
.............................................................................................................CGTTTGTACCGGCTGCTATCTATT...................................................................................................................... 24 1 20 0.05 1 0 1 0 0 0 0
...............................................................................................................TTTGTACCGGCTGTTATCTATT...................................................................................................................... 22 1 20 0.05 1 1 0 0 0 0 0
..............................................................................CCGTTTATCCCGGTGCAACAGCGTGT................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0
.............................................................................ACCGTTTATCCCGGTGCAACAGCGTG.................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0
...................................................................................TATCCCGGTGCAACAGCTTGTCGAGC.............................................................................................................................................. 26 1 20 0.05 1 1 0 0 0 0 0
................................................................................GTTTATCCCGGTGCAACAGCGCGT................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0
................................................................................GTTTATCCCGGTGCAACAGCGTGC................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0
........................................................................................CGGTGCAACAGCGTGTCGAGC.............................................................................................................................................. 21 0 20 0.05 1 1 0 0 0 0 0
..............................................................................................................GTTTGTACCGGCTGGTATCTATTCT.................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0
.................................................................................................................TGTACCGGCTGGTATCTATTG..................................................................................................................... 21 1 20 0.05 1 1 0 0 0 0 0
................................................................................GTCTATCCCGGTGCAACAGCGTGT................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0
........................................................................................................CGAGCCGTTTGTACCGGCTGGTATCTATG...................................................................................................................... 29 1 20 0.05 1 1 0 0 0 0 0
............................................................................................................CCGTTTGTACCGGCTGGTATCT......................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0
.............................................................................................................GGTTTGTACCGGCTGGTATCTATT...................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0
............................................................................................................CCGTTTGTACCGGCTGGTATCTATC...................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0
............................................................................................................TCGTTTGTACCGGCTGGTATCTATT...................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0
.............................................................................................................CGTTTGTACCGGCTGGTAT........................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0
..................................................................................ATATCCCGGTGCAACAGCGTGT................................................................................................................................................... 22 1 20 0.05 1 1 0 0 0 0 0
............................................................................................................CCGTTTGTACCGGCGGGTATCTA........................................................................................................................ 23 1 20 0.05 1 1 0 0 0 0 0
................................................................................GTTTATCCCGGCGCAACAGCGTGT................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0
..................................................................................TTATCCCGGTGCAACAGCGT..................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0
..........................................................................................GTGCAACAGCGTGTCGAGC.............................................................................................................................................. 19 0 20 0.05 1 1 0 0 0 0 0
............................................................................................................CCGTTTGTACCGGGTGGTATCT......................................................................................................................... 22 1 20 0.05 1 1 0 0 0 0 0
...................................................................................................................TACCGCCTGGTATCTATT...................................................................................................................... 18 1 20 0.05 1 0 1 0 0 0 0
.........................................................................................GGTGCAACAGCGTGTCGA................................................................................................................................................ 18 0 20 0.05 1 1 0 0 0 0 0
.............................................................................ACCGTTTATCCCGGTGAAACAGCGT..................................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0
..............................................................................CCGTTTATCCCGGTGCAACAGCGTG.................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0
................................................................................GTGTATCCCGGTGCAACAGCGTGT................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0
..........................................................................................................AGCCGTTTGTACCGGCTGATATCTATT...................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0 0
......................................................................................CCCGGTGCAACAGCGTGTCGAGCCGT........................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0
...................................................................................TATCCCGGTGCAACAGCGTATCGA................................................................................................................................................ 24 1 20 0.05 1 1 0 0 0 0 0
........................................................................................................CTAGCCGTTTGTACCGGCTGGTATCTATT...................................................................................................................... 29 1 20 0.05 1 1 0 0 0 0 0
.............................................................................................................AGTTTGTACCGGCTGGTATCTAT....................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0
..............................................................................................................GTTTGTACCGGTTGGTATCTATT...................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0
..............................................................................................................GTTTGTACCGGCTGGTATCTATA...................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0
................................................................................TTTTATCCCGGTGCACCAGCGTGT................................................................................................................................................... 24 2 20 0.05 1 1 0 0 0 0 0
..............................................................................................................GTTTGTACCGGCTTGTATCTAT....................................................................................................................... 22 1 20 0.05 1 1 0 0 0 0 0
..........................................................................................................AGCCGTTTGTACCGACTGGTATCTATT...................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0 0
.............................................................................................................AGTTTGTACCGGCTGGTATCTATT...................................................................................................................... 24 1 20 0.05 1 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_72:174724-174974 - dpe_2061 AGGAGGAT---AGTTGTATGCCTATGGCCAGCTGCAAGCTCATCATAAAAGAGCAGTACA--TGCGACTAACAGACAACAAGTGGCAAATAGGGCCACGTTGTCGCACAGCTCGGCAAACATGGCCGACCATAGATAAGA-AGCGCACCGCAGAGCTCTGCAAAGTAGGCAGGGAAAGGTGCAGCGCGGTCATACGTTCCTTAACAGGACACTGGCTAGTAGGCACTCACGCAAGTAGGCTGGGTGCCCCATACAAC
dp5 4_group2:1078114-1078364 + AGGAGGAT---ATTTGTATGCCTATGGCCAGCTGCAAGCTCATCATAAAAGAGCAGTACA--TGCGACTAACAGACAACAAGTGGCAAATAGGGCCACGTTGTCGCACAGCTCGGCAAACATGGCCGACCATAGATAAGA-AGCGCACCGCAGAGCTCTGCAAAGTAGGCAGGGAAAGGTGCAGCGCGGTCATACGTTCCTTAACAGGACACTGGCTAGTAGGCACTCACGCAAGTAGGCTGGGTGCCCCATACAAC
droGri2 scaffold_15110:24539579-24539829 + AGGAAGGT---ATAAGTATGCCTCTAGCTACCTGCAAGCTCAACATCAAAGAGGAGTACA--GGCGCAGGTCATGCAGTAAATGGCAAAGTGCCACCTGTGCCCGCATAGCACACCAGACATGGCCTATTCTTAACTCCA-AGCGCAGCAGAGAGCTGTGCAATCTAAGTCGGACCAACTGTTCTGCAGTGATCCGGGCTCTAACTGGGCACTGGCTGGTAGGCATTCATGCCACCAGACTCCAGGTGCCATACAAT
droAna3 scaffold_1930:822-1075 + AGAAAGAATTAGTAGGCATACCCTTGGCTACTTGCAAGCTAAAGTGCAGGGAGTTTTTCG--ACCTGGCAGCCAATAGGAAATGGAATAATCTCCAGACCTGTAAAACATCACGTCTGATCTGGCCGACACGCTCTCAGA-AAAGATCGGCGAGACTCATTGCTCTGACTAGACCGGAATGCAGCCTAGCGATTGGGGCAATCACTGGGCACTGGCTGATAGGCGAACACGCGGCCAGGCTTGCAGTCCCCCACAAT
droBip1 scf7180000396788:36739-36977 + TGGAGGAT---ACTGGTATTTATTTAGCCTCATACAAACTTCGGCTTAAAGAAACCACAA---ATAGCAAGAAATTCTAACTCAATTTCGTCTCA----------GTTGAAGCGCCAACTTTGGCCGTTCATCTCAAATA-AAAGAACATCTCAACTTCTGAGGATGGACAGAATTAAATT-ATCTCGGCTATCGGTGTCATCACGCGGCACTGGCTATTGGGAAAACATGCTAGGCGAATGAATTCACCCAACAAC
droKik1 scf7180000298593:1075-1323 - ACAGACAT---ACAGATCTCCCTGAAC-TCAGTCCAGACGGAAA-TTCATGACCATTTCA--AACAACTAGCCAGCAAGGAATGGTCGACGAAGGCAGAGCACAGAAGATCGAAACTATGCTGGCCAGAATTCAATAGGA-AGAGAACCGCAGAACTGATCTCCAAGAGCAAAAAGGACATCAGGAGGATAGCAGCAACCATCACCGGCCACTGGCCAATAGGCACGCAAGCCTGTAAGATGGGTCTACCCTACAAC
droEle1 scf7180000489865:1863-2110 + AGGAGAAC---ATTGGTATGCCGATGGTCACCTGCAAGCTAAACATTAAAACA-AATATA--AAGAACTTGCGGGCCTAGCATGGGCACATGTGAGACATTGTCACATCTCTCGCCAGACACGGCCAAATATGAATGCGA-AGAAAACTTCTGAACTTCTAAAGCTAAACCGTACCGAGTGCGGCATGCTAATACGAGTGCTAACAGGCCATTGGTTGGTCGGAACACATGCAAGCAGACTGGGCGCCCC--AAAAC
droRho1 scf7180000777143:13899-14149 - AGGAGAAT---GTTGGCATGCCTATGGCTACTTGCAAGCTAATTATTAAAAACCACTTCA--GCAAATTAGCCAACACTCATTGGCAAAACACACCGCAATGCCGAATCTCTCACCAGACATGGCCTGTAATAAACAATA-AGAAAACATCAGAACTACTCAATTTCAGCCGCACTGAGTGCAGCATGCTAATCCGAGTACTCACAGGCCACTGGCTCGTTGGCGCACACGCCGGCAGGCTAAAAGCCCCAAAAAAC
droBia1 scf7180000301240:8109-8352 - AGAAGAAT---GTCGGCATGCTTTTAACAACTTCCAAGCTAAATAACAGAAACTATTTTA--ACAAATTTA------TTAGTTCGCAGAACGCACTAGAGTGTCGTATATCTAACCAGACATGGCCTGTAATTAACAGTAAAAAACACCTCGGAACTAATCAAACTCAGCTGCACAAAGTGCGGTATGCTAGTTGGAGTTCTTATAGGCCTCTGGCTCGTAGGCACACATGCCAGCAGTCTAAAA--CCCAAAAAAT
droTak1 scf7180000415116:6730-6979 + AGGAGAAT---GTTGGCATGCCTATGGCTAACTGTAAGCTAATTATTAAAAACCATTTCT--GCAAATTAGCCAACACCAATTGGCAAA-CACACCGCAGTGCCGAATCTCTCACCAGACATGGCCTGCAATAAACAATA-AGAAAACATCAGACCTACTGAATTTCAGCCGCACCGAGTGCGGCATGCTAATTCGAGTACTCACAGGCCACTGGCTCGTTGGCGCACACGCCGGCAGGCTAAAAGCCCCAAAAAAT
droYak3 v2_chrUn_004:774753-775003 - TGGAGGGC---ATGAGTATGCCTTTAGCCACTTGTAAACTACTACTTAGGGAAAACCTAAACCGTAACAAACAGA--CAATATGGGAAAACACCACACACTGTCGCCTAACTCGCCAAATATGGCCAAAAATAAGCTCAA-AGAGAACGTCAAATCTTTTAAGATTAACCAGAGCAAACCTCAGCACGGCAATGAGAGTCATCACAGGGCATTGGTTGATAGGCACCCATGCCAGAAGACTAAATGCCCCGTATAAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
AGGAGGAT---AGTTGTATGCCTATGGCCAGCTGCAAGCTCATCATAAAAGAGCAGTACA--TGCGACTAACAGACAACAAGTGGCAAATAGGGCCACGTTGTCGCACAGCTCGGCAAACATGGCCGACCATAGATAAGA-AGCGCACCGCAGAGCTCTGCAAAGTAGGCAGGGAAAGGTGCAGCGCGGTCATACGTTCCTTAACAGGACACTGGCTAGTAGGCACTCACGCAAGTAGGCTGGGTGCCCCATACAACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................................................................................................................................................................................................AACAGGACACTGGCTAGTAGG..................................2130.331000001
......................................................................................................................................................CAGAGCTCTGCAAAGTAGGCA......................................................................................2130.331000001
..................................................................................................................................................................................................................................TCACGCAAGTAGGCTGGGT............1930.331000001
......................................................................................................................................................................................AGCGCGGTCATACGTTCCTTAACAG..................................................2530.331010000
....................................................................TAACAGACAACAAGTGGCAAATAGGGC..................................................................................................................................................................27100.303020001
................................................................................................................................CCATAGATAAGA-AGCGCACCGCAGA.......................................................................................................2560.171000001
.........................................................ACA--TGCGACTAACAGACAAC..................................................................................................................................................................................20120.172200000
...................................................................................................................................................................................................................................CACGCAAGTAGGCTGGGTGCC.........2190.111000001
......................................................................................................................................................................AGGCAGGGAAAGGTGCAGC........................................................................19200.102000002
.................................................AGAGCAGTACA--TGCGACTAACAGACAAC..................................................................................................................................................................................28120.081010000
........................................CATCATAAAAGAGCAGTACA--TGCGACTA...........................................................................................................................................................................................28150.071010000
.........................................ATCATAAAAGAGCAGTACA--TGCGAC.............................................................................................................................................................................................25150.071010000
..........................................TCATAAAAGAGCAGTACA--TG.................................................................................................................................................................................................20170.061000001
........................................CATCATAAAAGAGCAGTACA--TGCG...............................................................................................................................................................................................24170.061010000
......................................................................................................TCGCACAGCTCGGCAAACATGG.....................................................................................................................................22200.051010000
................................................................................................................................CCATAGATAAGA-AGCGCA..............................................................................................................18200.051001000
.....................................................................................................................................................................TAGGCAGGGAAAGGTGTC..........................................................................18200.051000001
.......................................................................................................................CATGGCCGACCATAGATAAG......................................................................................................................20200.051010000
............................................................................................................................................................................................................CAGGACACTGGCTAGTAGG..................................19200.051001000
dp5
AGGAGGAT---ATTTGTATGCCTATGGCCAGCTGCAAGCTCATCATAAAAGAGCAGTACA--TGCGACTAACAGACAACAAGTGGCAAATAGGGCCACGTTGTCGCACAGCTCGGCAAACATGGCCGACCATAGATAAGA-AGCGCACCGCAGAGCTCTGCAAAGTAGGCAGGGAAAGGTGCAGCGCGGTCATACGTTCCTTAACAGGACACTGGCTAGTAGGCACTCACGCAAGTAGGCTGGGTGCCCCATACAACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................................................................................................................................................................................TAGTAGGCACTCACGCAAGTAGGC.................2427.00140200000840
....................................................................................................................................................................................................................TGGCTAGTAGGCACTCACGCAAGTAG...................2621.0020000000200
.........................................................................................................................................................................................................................AGTAGGCACTCACGCAAGTAGGCTGG..............2621.0020000000200
....................................................................................................TGTCGCACAGCTCGGCAAACATGG.....................................................................................................................................24170.761301300000000
....................................................................................................TGTCGCACAGCTCGGCAAACATGGC....................................................................................................................................25170.5390710000100
......................................................................................................................................................CAGAGCTCTGCAAAGTAGG........................................................................................1920.5010000000010
........................................................................................................................................AAGA-AGCGCACCGCAGAGCTCTG.................................................................................................2320.5010000000010
.............................................................................................................................................................................................TCATACGTTCCTTAACAGGACACTGG..........................................2620.5010100000000
........................................................................................................................................................................................................................TAGTAGGCACTCACGCAAG......................1920.5010000000100
...............................................................................................................................ACCATAGATAAGA-AGCGCACCGCAGAG......................................................................................................2720.5010100000000
..............TGTATGCCTATGGCCAGCTGCAAGC..........................................................................................................................................................................................................................2520.5010100000000
................................................................................................................................CCATAGATAAGA-AGCGCACCG...........................................................................................................2120.5010100000000
..............................................................................................................................................................................................CATACGTTCCTTAACAGGACACTGGC.........................................2620.5010100000000
...............................................................................................................................ACCATAGATAAGA-AGCGCACCGC..........................................................................................................2320.5010100000000
.................................................................................................................................................CACCGCAGAGCTCTGCAAAG............................................................................................2020.5010000001000
.......................................................................................................................................TAAGA-AGCGCACCGCAGAGCTCTTT................................................................................................2520.5010100000000
.........................................................................................................................................................................................................................AGTAGGCACTCACGCAAGTAGGC.................2320.5010000000100
................................................................................................................................................................................AGGTGCAGCGCGGTCATACG.............................................................2020.5010000000010
............................................................................................................................................................TCTGCAAAGTAGGCAGGGAAAGGTG............................................................................2520.5010000001000
................................................................................................................................CCATAGATAAGA-AGCGCACCGCAGAG......................................................................................................2620.5010100000000
...............................CTGCAAGCTCATCATAAAAGAGCAG.........................................................................................................................................................................................................25140.4360400200000
....................................................................TAACAGACAACAAGTGGCAAATAGGGC..................................................................................................................................................................2730.3310100000000
....................................................................................................TGTCGCACAGCTCGGCAAACATG......................................................................................................................................23170.2950400100000
......................................................................................................TCGCACAGCTCGGCAAACATGGC....................................................................................................................................23180.2850120000200
......................................................................................................TCGCACAGCTCGGCAAACATGG.....................................................................................................................................22180.2850500000000
...............................................................................................CACGTTGTCGCACAGCTCGGCAAA..........................................................................................................................................24140.2130100000020
...................................................................................................................................................................................................................................CACGCAAGTAGGCTGGGT............1850.2010000000010
..........................................................................ACAACAAGTGGCAAATAGGG...................................................................................................................................................................2050.2010000001000
.........................................................................GACAACAAGTGGCAAATAGGG...................................................................................................................................................................2150.2010000000010
....................................................................................................TGTCGCACAGCTCGGCAAACATGGCC...................................................................................................................................26170.1830300000000
..........................................................................................AGGGCCACGTTGTCGCACAGCTCGGCAA...........................................................................................................................................28120.1720200000000
.........................................................................................TAGGGCCACGTTGTCGCACAGCTCGG..............................................................................................................................................2670.1410100000000
....................................................................................GCAAATAGGGCCACGTTGTC.........................................................................................................................................................2070.1410001000000
...............................CTGCAAGCTCATCATAAAAGAGCAGTA.......................................................................................................................................................................................................27140.1420200000000
...............................................................................................CACGTTGTCGCACAGCTCGG..............................................................................................................................................20140.1420200000000
.........................................................................................TAGGGCCACGTTGTCGCACAGCT.................................................................................................................................................2370.1410100000000
..................................................................................TGGCAAATAGGGCCACGTTGTCG........................................................................................................................................................2370.1410100000000
.........................................................................................TAGGGCCACGTTGTCGCACAT...................................................................................................................................................2180.1310100000000
......................................................................................................TCGCACAGCTCGGCAAACATG......................................................................................................................................21180.1120200000000
.....................................................................................................................................................................TAGGCAGGGAAAGGTGCAG.........................................................................19190.1120200000000
..........................................................................................................ACAGCTCGGCAAACATGGC....................................................................................................................................19200.1020000000020
................................................................................................................................CCATAGATAAGA-AGCGCACC............................................................................................................20200.1020100000100
...............................................................................................................................ACCATAGATAAGA-AGCGCA..............................................................................................................19200.1020200000000
............................................................................................GGCCACGTTGTCGCACAGCTCGGC.............................................................................................................................................24120.0810100000000
..............................................................................................CCACGTTGTCGCACAGCTCG...............................................................................................................................................20120.0810100000000
.GGAGGAT---ATTTGTATGCCTATGGCCA...................................................................................................................................................................................................................................26130.0810100000000
.................................................................................................CGTTGTCGCACAGCTCGGCA............................................................................................................................................20140.0710100000000
...............................................................................................CACGTTGTCGCACAGCTCGGCA............................................................................................................................................22140.0710100000000
................................TGCAAGCTCATCATAAAAGAGCAG.........................................................................................................................................................................................................24140.0710100000000
.................................................................................................CGTTGTCGCACAGCTCGGCAAACATGG.....................................................................................................................................27140.0710100000000
................................TGCAAGCTCATCATAAAAGAGCAGTA.......................................................................................................................................................................................................26140.0710100000000
...............................................................................................CACGTTGTCGCACAGCTCGGCAA...........................................................................................................................................23140.0710100000000
...........................................................................................................................................................................................................ACAGGACACTGGCTAGTAGG..................................20150.0710100000000
...........................................................................................................................................................................................................ACAGGACACTGGCTAGTAGGC.................................21150.0710100000000
.GGAGGAT---ATTTGTATGCCTATGGC.....................................................................................................................................................................................................................................24160.0610100000000
....................................................................................................TGTCGCACAGCTCGGCAAACATGGCCG..................................................................................................................................27160.0610100000000
....................................................................................................TGTCGCACAGCTCGGCAAACATGGCCGA.................................................................................................................................28160.0610100000000
....................................................................................................TGTCGCACAGCTCGGCAAACATA......................................................................................................................................23170.0610100000000
.....................................................................................................GTCGCACAGCTCGGCAAACATGGC....................................................................................................................................24170.0610100000000
.....................................................................................................GTCGCACAGCTCGGCAAACAT.......................................................................................................................................21170.0610100000000
.....................................................................................................................................................................TAGGCAGGGAAAGGTGCAGCA.......................................................................21170.0610100000000
..GAGGAT---ATTTGTATGCCTATGG......................................................................................................................................................................................................................................22170.0610100000000
......................................................................................................................ACATGGCCGACCATAGATAAGA-AGCGC...............................................................................................................27170.0610000000010
.....................................................................................................................................................................TAGGCAGGGAAAGGTGCAGC........................................................................20170.0610100000000
.......................................................................................................CGCACAGCTCGGCAAACATGGCCGA.................................................................................................................................25170.0610100000000
....GGAT---ATTTGTATGCCTATGG......................................................................................................................................................................................................................................20180.0610100000000
....GGAT---ATTTGTATGCCTATGGC.....................................................................................................................................................................................................................................21180.0610100000000
.....GAT---ATTTGTATGCCTATGGC.....................................................................................................................................................................................................................................20180.0610100000000
.......................................................................................................CGCACAGCTCGGCAAACATGGCC...................................................................................................................................23180.0610100000000
......................................................................................................TCGCACAGCTCGGCAAACATGGCA...................................................................................................................................24180.0610100000000
.......................................................................................................CGCACAGCTCGGCAAACATGGC....................................................................................................................................22180.0610010000000
.........................................................................................................................TGGCCGACCATAGATAAGA-AGCG................................................................................................................23190.0510000000010
.........................................................................................................CACAGCTCGGCAAACATGGA....................................................................................................................................20200.0510100000000
............................................................................................................................CCGACCATAGATAAGA-AGCGC...............................................................................................................21200.0510000000010
...............................................................................................................................ACCATAGATAAGA-AGCGCACC............................................................................................................21200.0510010000000
droGri2
AGGAAGGT---ATAAGTATGCCTCTAGCTACCTGCAAGCTCAACATCAAAGAGGAGTACA--GGCGCAGGTCATGCAGTAAATGGCAAAGTGCCACCTGTGCCCGCATAGCACACCAGACATGGCCTATTCTTAACTCCA-AGCGCAGCAGAGAGCTGTGCAATCTAAGTCGGACCAACTGTTCTGCAGTGATCCGGGCTCTAACTGGGCACTGGCTGGTAGGCATTCATGCCACCAGACTCCAGGTGCCATACAATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.....................................................................................................CCCGCATAGCACACCAGACATG......................................................................................................................................22200.05110
droAna3
AGAAAGAATTAGTAGGCATACCCTTGGCTACTTGCAAGCTAAAGTGCAGGGAGTTTTTCG--ACCTGGCAGCCAATAGGAAATGGAATAATCTCCAGACCTGTAAAACATCACGTCTGATCTGGCCGACACGCTCTCAGA-AAAGATCGGCGAGACTCATTGCTCTGACTAGACCGGAATGCAGCCTAGCGATTGGGGCAATCACTGGGCACTGGCTGATAGGCGAACACGCGGCCAGGCTTGCAGTCCCCCACAATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................................................................................................................................................................CCGGAATGCAGCCTAGCGATTGG.............................................................23200.55111100000
....................................AGCTAAAGTGCAGGGAGTTTTTCG--ACA................................................................................................................................................................................................2720.501100000
........................................................................................................................................................................................................................TGATAGGCGAACACGCGGCCAGG..................23200.306600000
...................................................................................................................................................................TCTGACTAGACCGGAATGCAGCCTAGC...................................................................27200.306420000
..................................................................................................................................CGCTCTCAGA-AAAGATCGGCGAGA......................................................................................................24200.255500000
........................................................................................................................................................................................................................TGATAGGCGAACACGCGGCCAGGCTTG..............27200.204400000
.................................................................................................................................................................................................................CACTGGCTGATAGGCGAACACGCGG.......................25200.204130000
..........................................................................................................................................................................................TAGCGATTGGGGCAATCACTGGGC...............................................24200.153102000
.................................................................................................................................................................GCTCTGACTAGACCGGAATGCAGCC.......................................................................25200.153030000
.................................................................................................................................................................................................TGGGGCAATCACTGGGCACTGGC.........................................23200.153300000
.........................................................................................................................................................................................................................GATAGGCGAACACGCGGCCAGGCTT...............25200.102200000
.......................................TAAAGTGCAGGGAGTTTTTCG--ACC................................................................................................................................................................................................24200.102020000
...................................................................................................................................................................................................................CTGGCTGATAGGCGAACACGCGG.......................23200.102200000
...................................................AGTTTTTCG--ACCTGGCAGCCAATAGG..................................................................................................................................................................................26200.102200000
......................................................................GCCAATAGGAAATGGAATAATCTCCAGA...............................................................................................................................................................28200.102002000
...........................................................................................................................................................................................................................TAGGCGAACACGCGGCCAGGC.................21200.102200000
........TTAGTAGGCATACCCTTGGCTAC..................................................................................................................................................................................................................................23200.102020000
......................................................................................................................................................................................................CAATCACTGGGCACTGGCTGATAG...................................24200.102200000
......................................CTAAAGTGCAGGGAGTTTTTCG--ACCT...............................................................................................................................................................................................26200.102200000
.....................................................................................................................................................................TGACTAGACCGGAATGCAGCCTAGCGAT................................................................28200.102200000
........................................................................................................................................................................................................................TGATAGGCGAACACGCGGCCAGGC.................24200.102020000
..........................................................................................................ACATCACGTCTGATCTGGCCGAC................................................................................................................................23200.102200000
.........................................................................................................................................................................TAGACCGGAATGCAGCCTAGCGATTG..............................................................26200.102200000
..............................................................................................................................................................................................GATTGGGGCAATCACTGGGCACTG...........................................24200.102200000
..................................................................................................................................................................................ATGCAGCCTAGCGATTGGGG...........................................................20200.102200000
................................................................................................................................................................TGCTCTGACTAGACCGGAATGCAGCC.......................................................................26200.102110000
...................................................................................................................................................................................................................CTGGCTGATAGGCGAACACGCGGCC.....................25200.102200000
.................................................................................................................................................................................................TGGGGCAATCACTGGGCACTGG..........................................22200.102200000
.............................................................................................................................................................................CCGGAATGCAGCCTAGCGATTG..............................................................22200.102200000
.........................................................................................................................................................................................................................GATAGGCGAACACGCGGCCAGG..................22200.102200000
.................................................................................................................................................................GCTCTGACTAGACCGGAATGCAGCCTAG....................................................................28200.102200000
...........................................................................................................................................................................GACCGGAATGCAGCCTAGCGATTG..............................................................24200.102110000
...............................................................................................................................................................................................ATTGGGGCAATCACTGGGCACTGG..........................................24200.051100000
............................................................................................................................................................................................................................AGGCGAACACGCGGCCAGGCTTGCAG...........26200.051100000
.........................................................................................................................................................................................CTAGCGATTGGGGCAATCACTGG.................................................23200.051100000
..........................................................................ATAGGAAATGGAATAATCTCCAGACC.............................................................................................................................................................26200.051100000
........................................................................................................................................................................................................................TGATAGGCGAACACGCGGCCAGGCTT...............26200.051100000
..........................................................................................................................................................................................TAGCGATTGGGGCAATCACTGGGCA..............................................25200.051100000
.................................................GGAGTTTTTCG--ACCTGGCAGCCA.......................................................................................................................................................................................23200.051100000
...................................................................................................................................GCTCTCAGA-AAAGATCGGCGAGAC.....................................................................................................24200.051010000
................................................................................................................................................................................................................................GAACACGCGGCCAGGCTTGCAGTCCCC......27200.051100000
................................................................................................................................................................................................................................GAACACGCGGCCAGGCTTGCAGTCC........25200.051010000
................................................................................................................................................................................................TTGGGGCAATCACTGGGCACTG...........................................22200.051100000
...............................................................................................................................................................TTGCTCTGACTAGACCGGAATGCAGC........................................................................26200.051010000
.......................................................................................................................................................................................................AATCACTGGGCACTGGCTGATAGGCGAA..............................28200.051010000
..............................................................................................................................................................................................GATTGGGGCAATCACTGGGCACC............................................23200.051010000
.............................................................................................................................................................................CCGGAATGCAGCCTAGCGATT...............................................................21200.051100000
.........................................................................................................................................................................................................TCACTGGGCACTGGCTGATAGGCGAA..............................26200.051100000
...........................................................................................................................................................CTCATTGCTCTGACTAGACC..................................................................................20200.051100000
..AAAGAATTAGTAGGCATACCCTTGGCT....................................................................................................................................................................................................................................27200.051100000
............................................................................................TCCAGACCTGTAAAACATCACG...............................................................................................................................................22200.051100000
.................................................................................................................................................................GCTCTGACTAGACCGGAATGCAG.........................................................................23200.051100000
....................................................................................................................................................................CTGACTAGACCGGAATGCAGCCTA.....................................................................24200.051100000
...........................................................................................................CATCACGTCTGATCTGGCCGACAC..............................................................................................................................24200.051010000
..........................................................................................................................................................................................................CACTGGGCACTGGCTGATAGGCGA...............................24200.051010000
..................................................................................................................................................................................................GGGGCAATCACTGGGCACTGGCTGA......................................25200.051100000
..................................................................................................................................................................................................GGGGCAATCACTGGGCACTGG..........................................21200.051100000
...................................................................................................................................................................................................................CTGGCTGATAGGCGAACACGCGGC......................24200.051100000
...............................................................................................................................................................TTGCTCTGACTAGACCGGAATGC...........................................................................23200.051010000
................................................................................................................................................................TGCTCTGACTAGACCGGAATGCAGCCTA.....................................................................28200.051100000
................................................................................................................................................................................................TTGGGGCAATCACTGGGCACT............................................21200.051100000
........TTAGTAGGCATACCCTTGGCTACTTG...............................................................................................................................................................................................................................26200.051100000
..........................................................................................................................................................................................TAGCGATTGGGGCAATCACTGG.................................................22200.051010000
...............................................................................................................................................................................GGAATGCAGCCTAGCGATTGGGGC..........................................................24200.051100000
..................................................................................................................................................................................................................................ACACGCGGCCAGGCTTGCAGTCCCC......25200.051100000
.............................................................................................................................................................................................................TGGGCACTGGCTGATAGGCGAACACG..........................26200.051100000
..................................................................................................................................................................................................GGGGCAATCACTGGGCACTGGC.........................................22200.051100000
...........................................................G--ACCTGGCAGCCAATAGGAAAT..............................................................................................................................................................................22200.051010000
.............................................................................................................................................AAAGATCGGCGAGACTCATTGCTCT...........................................................................................25200.051010000
...........................................................................................................................................................................................................................TAGGCGAACACGCGGCCAGGCTTGCA............26200.051100000
.............................................................................................................TCACGTCTGATCTGGCCGACACGCT...........................................................................................................................25200.051100000
.................................................................................................................................................................GCTCTGACTAGACCGGAATGCAGCCTAGC...................................................................29200.051100000
..................................................................................................................TCTGATCTGGCCGACACGCTCTC........................................................................................................................23200.051100000
.......ATTAGTAGGCATACCCTTGGC.....................................................................................................................................................................................................................................21200.051010000
...............................................................................................................................................................................................................................CGAACACGCGGCCAGGCTTGCAGTCC........26200.051010000
...........................................................................................................................................................................................AGCGATTGGGGCAATCACTGGG................................................22200.051100000
.........................................................................................................................................................................TAGACCGGAATGCAGCCTAGCGA.................................................................23200.051010000
.....................................................TTTTTCG--ACCTGGCAGCC........................................................................................................................................................................................18200.051010000
.............................................................................................................................................................CATTGCTCTGACTAGACCGGAATGC...........................................................................25200.051010000
......................................................................................................................................................................................................................................GCGGCCAGGCTTGCAGTCCCCCA....23200.051100000
........................................................................CAATAGGAAATGGAATAATCTCCAGA...............................................................................................................................................................26200.051100000
.....................................................................................................................................................................TGACTAGACCGGAATGCAGC........................................................................20200.051000010
.........................................................................................................................................................................................................TCACTGGGCACTGGCTGATAGGCGA...............................25200.051100000
........................................................................CAATAGGAAATGGAATAATCTCCAGAC..............................................................................................................................................................27200.051010000
...................................................................................................................................GCTCTCAGA-AAAGATCGGCGAGA......................................................................................................23200.051100000
.................................................................................................................................................................................................................CACTGGCTGATAGGCGAACACGCGGC......................26200.051100000
droBip1
TGGAGGAT---ACTGGTATTTATTTAGCCTCATACAAACTTCGGCTTAAAGAAACCACAA---ATAGCAAGAAATTCTAACTCAATTTCGTCTCA----------GTTGAAGCGCCAACTTTGGCCGTTCATCTCAAATA-AAAGAACATCTCAACTTCTGAGGATGGACAGAATTAAATT-ATCTCGGCTATCGGTGTCATCACGCGGCACTGGCTATTGGGAAAACATGCTAGGCGAATGAATTCACCCAACAACSizeHit CountTotal NormTotal
No Reads
droKik1
ACAGACAT---ACAGATCTCCCTGAAC-TCAGTCCAGACGGAAA-TTCATGACCATTTCA--AACAACTAGCCAGCAAGGAATGGTCGACGAAGGCAGAGCACAGAAGATCGAAACTATGCTGGCCAGAATTCAATAGGA-AGAGAACCGCAGAACTGATCTCCAAGAGCAAAAAGGACATCAGGAGGATAGCAGCAACCATCACCGGCCACTGGCCAATAGGCACGCAAGCCTGTAAGATGGGTCTACCCTACAACSizeHit CountTotal NormTotal
No Reads
droEle1
AGGAGAAC---ATTGGTATGCCGATGGTCACCTGCAAGCTAAACATTAAAACA-AATATA--AAGAACTTGCGGGCCTAGCATGGGCACATGTGAGACATTGTCACATCTCTCGCCAGACACGGCCAAATATGAATGCGA-AGAAAACTTCTGAACTTCTAAAGCTAAACCGTACCGAGTGCGGCATGCTAATACGAGTGCTAACAGGCCATTGGTTGGTCGGAACACATGCAAGCAGACTGGGCGCCCC--AAAACSizeHit CountTotal NormTotal
No Reads
droRho1
AGGAGAAT---GTTGGCATGCCTATGGCTACTTGCAAGCTAATTATTAAAAACCACTTCA--GCAAATTAGCCAACACTCATTGGCAAAACACACCGCAATGCCGAATCTCTCACCAGACATGGCCTGTAATAAACAATA-AGAAAACATCAGAACTACTCAATTTCAGCCGCACTGAGTGCAGCATGCTAATCCGAGTACTCACAGGCCACTGGCTCGTTGGCGCACACGCCGGCAGGCTAAAAGCCCCAAAAAACSizeHit CountTotal NormTotal
No Reads
droBia1
AGAAGAAT---GTCGGCATGCTTTTAACAACTTCCAAGCTAAATAACAGAAACTATTTTA--ACAAATTTA------TTAGTTCGCAGAACGCACTAGAGTGTCGTATATCTAACCAGACATGGCCTGTAATTAACAGTAAAAAACACCTCGGAACTAATCAAACTCAGCTGCACAAAGTGCGGTATGCTAGTTGGAGTTCTTATAGGCCTCTGGCTCGTAGGCACACATGCCAGCAGTCTAAAA--CCCAAAAAATSizeHit CountTotal NormTotal
No Reads
droTak1
AGGAGAAT---GTTGGCATGCCTATGGCTAACTGTAAGCTAATTATTAAAAACCATTTCT--GCAAATTAGCCAACACCAATTGGCAAA-CACACCGCAGTGCCGAATCTCTCACCAGACATGGCCTGCAATAAACAATA-AGAAAACATCAGACCTACTGAATTTCAGCCGCACCGAGTGCGGCATGCTAATTCGAGTACTCACAGGCCACTGGCTCGTTGGCGCACACGCCGGCAGGCTAAAAGCCCCAAAAAATSizeHit CountTotal NormTotal
No Reads
droYak3
TGGAGGGC---ATGAGTATGCCTTTAGCCACTTGTAAACTACTACTTAGGGAAAACCTAAACCGTAACAAACAGA--CAATATGGGAAAACACCACACACTGTCGCCTAACTCGCCAAATATGGCCAAAAATAAGCTCAA-AGAGAACGTCAAATCTTTTAAGATTAACCAGAGCAAACCTCAGCACGGCAATGAGAGTCATCACAGGGCATTGGTTGATAGGCACCCATGCCAGAAGACTAAATGCCCCGTATAATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................GCCACTTGTAAACTACTACTTAGGGA.............................................................................................................................................................................................................26200.7014030000000011
....................................................................................................TGTCGCCTAACTCGCCAAATATGGCCT..................................................................................................................................2720.50101000000000
......................................................................ACAGA--CAATATGGGAAAACACCACA................................................................................................................................................................25200.20404000000000
...................................................................................................................................................................................................................TTGGTTGATAGGCACCCATGCCAGA.....................25200.15303000000000
.........................................................................................................................TGGCCAAAAATAAGCTCAA-AGAGA...............................................................................................................24140.07101000000000
...............................TTGTAAACTACTACTTAGGGAAAACC........................................................................................................................................................................................................26200.05101000000000
.......................................................CCTAAACCGTAACAAACAGA--CAATATG.............................................................................................................................................................................27200.05101000000000
.........................................................................................................................................................................................................TCACAGGGCATTGGTTGATAGGCACCCA............................28200.05101000000000
........................................................................................................................................................................................................................TGATAGGCACCCATGCCAGAAGAC.................24200.05100100000000
..................................................................................TGGGAAAACACCACACACTGTCGCC......................................................................................................................................................25200.05100100000000
...............................................................................................................................................................................................ATGAGAGTCATCACAGGGCATT............................................22200.05100000010000
...........................CCACTTGTAAACTACTACTTAGGGAA............................................................................................................................................................................................................26200.05101000000000
........................................................................................................................................................................................................ATCACAGGGCATTGGTTGATAGGCAC...............................26200.05100100000000

Generated: 06/08/2015 at 05:07 PM