ID:

dpe_1989

 Coordinate:

scaffold_684:2162-2349 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.9 -6.4 -6.3

Flybase annnotation

exon [dper_GLEANR_15189:3]; CDS [Dper\GL14473-cds]; CDS [Dper\GL14473-cds]; exon [dper_GLEANR_15189:2]; intron [Dper\GL14473-in]

No Repeatable elements found

mature
  1. dpe_492  scaffold_0:11778560-11778578 +
  2. scaffold_1196:2376-2394 -
  3. scaffold_7:1435081-1435099 +
  4. scaffold_7:1439938-1439956 +
  5. scaffold_7:1444500-1444518 +
  6. scaffold_7:1449500-1449518 +
  7. scaffold_147:57032-57050 +
  8. scaffold_147:100215-100233 +
  9. scaffold_147:112185-112203 +
  10. scaffold_1827:1375-1393 -
  11. scaffold_2985:1048-1066 -
  12. scaffold_930:1584-1602 +
  13. scaffold_1350:2097-2115 -
  14. scaffold_2224:1271-1289 -
  15. scaffold_6620:1098-1116 -
  16. dpe_1989  scaffold_684:2244-2262 -
  17. scaffold_8019:492-510 -
star
  1. scaffold_1036:1877-1897 +
  2. scaffold_1058:11141-11161 -
  3. dpe_492  scaffold_0:11778530-11778550 +
  4. scaffold_1196:2404-2424 -
  5. scaffold_7:1435051-1435071 +
  6. scaffold_7:1439908-1439928 +
  7. scaffold_7:1444470-1444490 +
  8. scaffold_7:1449470-1449490 +
  9. scaffold_147:57002-57022 +
  10. scaffold_147:100185-100205 +
  11. scaffold_147:112155-112175 +
  12. scaffold_872:5695-5715 +
  13. scaffold_1350:2125-2145 -
  14. scaffold_1892:1899-1919 +
  15. scaffold_2224:1299-1319 -
  16. scaffold_1371:996-1016 -
  17. scaffold_1371:5196-5216 -
  18. scaffold_6620:1126-1146 -
  19. dpe_1989  scaffold_684:2272-2292 -
  20. scaffold_8019:520-540 -

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AAAATTCAGCGAGGCCAGCTGTCAGACAAGTGACAGACAGCTGTCACAGTGTAAGTTAGACCGTATCATAATCAAATTCTGTGACTCATACTATGGATTGCAGTGTACTTCTTGGCTTGATGGGTACTATCGTGGGTCTATGCACGCTCTACGACTACTTTCTGTGCCAGGATCAGAGTGAGTAACGGAGAGAACGGAATGATTAACAAAATGATTTAACTCGTATTTTGCCTACCAGGTAGTATCACGGCACGGTCAAGTTCCCGTGCCATCTTCCGCATTATCGAC
***********************************************************************************************************......................((((((((........)).))))))..************************************************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M021
embryo
 M042
female body
 V042
embryo
 V057
head
 V111
male body
.........................................................................................................................................CTATGCACGCTCTACGACT.................................................................................................................................... 19 0 17 0.18 3 3 0 0 0 0
...........................................................ACTGTATCATGCTCAAATTC................................................................................................................................................................................................................. 20 3 17 0.18 3 0 3 0 0 0
.............................................................................................................................................GCACGCTCTACGACTACTTTCTGT........................................................................................................................... 24 0 13 0.15 2 2 0 0 0 0
..................................................................................................................................................CTCTACGACTACTTTCTGTGCC........................................................................................................................ 22 0 13 0.15 2 2 0 0 0 0
..........................................................................................................................................................CTACTTTCTGTGCCAGGAT................................................................................................................... 19 0 14 0.14 2 2 0 0 0 0
.....................................................................................................GTTGTACTTCTTGGCTTGATGG..................................................................................................................................................................... 22 2 16 0.13 2 2 0 0 0 0
................................................................................................................................................CGCTCTACGACTACTTTCTGTGCCAGG..................................................................................................................... 27 0 12 0.08 1 1 0 0 0 0
.......................................................................................................................................................................................AACGGCGAGTACGGAATG....................................................................................... 18 2 12 0.08 1 0 0 0 1 0
...............................................................................................................................................................TTCTGTGCCAGGATCAGAGTAGT.......................................................................................................... 23 3 14 0.07 1 0 0 0 0 1
............................................................................................................................................................ACTTTCTGTGCCAGGATCAGA............................................................................................................... 21 0 14 0.07 1 0 1 0 0 0
......................................................................................................................................................ACGACTACTTTCTGTGCCAGGATC.................................................................................................................. 24 0 14 0.07 1 0 1 0 0 0
............................................................................................................................................................ACTTTCTGTGCCAGGATC.................................................................................................................. 18 0 14 0.07 1 0 1 0 0 0
..............................................................GTATCATGATCAAATTCCCT.............................................................................................................................................................................................................. 20 3 15 0.07 1 0 1 0 0 0
.........................................................................................................................................CTATGCACGCTCTACGACTAC.................................................................................................................................. 21 0 17 0.06 1 1 0 0 0 0
.....................................................................................................GTTGGACTTCTTGGCTTGATGG..................................................................................................................................................................... 22 3 18 0.06 1 1 0 0 0 0
...................................................................................................................................................TCTACGACTACTTTCTGG........................................................................................................................... 18 1 19 0.05 1 1 0 0 0 0
.........................................................................................................................................CTATGCACGCTCGACGACT.................................................................................................................................... 19 1 20 0.05 1 1 0 0 0 0
...........................................................................................................CTTCTTGGCTTGATGGGTACT................................................................................................................................................................ 21 0 20 0.05 1 0 0 1 0 0
...........................................................................................................CTTCTTGGCTTGATGGGTA.................................................................................................................................................................. 19 0 20 0.05 1 0 0 1 0 0
.............................................................................................................TCTTGGCTTGATGGGCACT................................................................................................................................................................ 19 1 20 0.05 1 0 0 1 0 0
...........................................................................................................................................................................................................................................................ACGGTCTAGTTCCCGAGC................... 18 2 20 0.05 1 0 0 1 0 0
.............................................................................................................TCTTGGCTTTATGGGTACT................................................................................................................................................................ 19 1 20 0.05 1 0 0 1 0 0

Anti-sense strand reads

TTTTAAGTCGCTCCGGTCGACAGTCTGTTCACTGTCTGTCGACAGTGTCACATTCAATCTGGCATAGTATTAGTTTAAGACACTGAGTATGATACCTAACGTCACATGAAGAACCGAACTACCCATGATAGCACCCAGATACGTGCGAGATGCTGATGAAAGACACGGTCCTAGTCTCACTCATTGCCTCTCTTGCCTTACTAATTGTTTTACTAAATTGAGCATAAAACGGATGGTCCATCATAGTGCCGTGCCAGTTCAAGGGCACGGTAGAAGGCGTAATAGCTG
************************************************************************************************************************************......................((((((((........)).))))))..*********************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V111
male body		 V057
head
 V050
head
...........................................................TGACATAGTACGAGTTTAAG................................................................................................................................................................................................................. 20 3 17 1.88 32 25 6 1 0
..........................................................CTGACATAGTACGAGTTTAAG................................................................................................................................................................................................................. 21 3 14 0.14 2 2 0 0 0
............................................................GACATAGTACGAGTTTAAG................................................................................................................................................................................................................. 19 3 20 0.10 2 0 1 0 1
..........................................................TTGACATAGTACTAGTTTAAG................................................................................................................................................................................................................. 21 3 11 0.09 1 1 0 0 0
...............................................................................................................................................................................................................................................ATGATAGCGCCGTGCTAG............................... 18 3 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_684:2112-2399 - dpe_1989 AAAA---TTCAGCGAGGCCAGCTGTCAGACAAGTGACAGACA-------------------GCTGTCACAGTGTAAGTTAGA---------CC--GTAT-------C---ATAA--------T----CAAATTC--------TGTG------ACTCATAC--TATGGATTGCAGTGTACTTCTTGGCTTGATGGGTACTATCGTGGGTCTATGCACGCTCTACGACTACTTTCTGTGCCAGGATCAGAGTGAGTAACGGAGAGA--A--CG-GAA-------------TGATTAACAA--------------AATGATT---TAACT-C-----GTATTTTGCCTACCAGGT---------------------AGTATCACGGCACGGTCAAGTTCCCGTGCCATCTTCCGCATTATCGAC
dp5 Unknown_group_762:1201-1528 + AAAA---TTCAGCGAGGCCAGCTGTCAGACAAGTGAATCGAAACCTTGGGATGGAATGACCATTTTCACAGAGTAAGTTAGA---------CC--GTAT-------C---ATAA--------T----CAAATTC--------TGTG------ACTCATAC--TATGGATTGCAGTGTACTTCTTGGCTTGAAGGGTACTATCGTGGGTCTATGCACGCTCTACGACTACTTTCTGTGCCAGGATCAGAGTGAGTAACGGAGAGA--A--CG-GAA-------------TGATTTACAA--------------AATGATT---TAACT-C-----GTATTTTGCCTACCAGGTAGTATTCTTGTGACTGTGAAGATTTGCTCGGCACGGTCAAGTTCCCGTGCCATCTTCCGCATTGTCGAC
droWil2 scf2_1100000004943:16041115-16041443 + GAAT---T------------CTTGCAAGGTAGCAGAAAAGGACTCCTTTGATGGCCTTACCATATTCACAATGTAAGCTAGAGAAATCCTTAA--------CAAATT---GTAA----TTG-T----T--AATT---GAGAATTATTT-------GA-----TGAATTTTGCAGCGTTTTCCTTTCTGTGGTTGCTGGAATTGTCGGCTTGTCCACCCTCTATGATTACTTTTTGTGCCAAGATCAGAGTGAGTAATCAAAAAA--A--AA-AAC--TCAAAATGAAGTC-------A----ATGGT--CAT-------------------TACTTATTTAAAATTTCAGCAAAAGTCCCCGTTCTGATTAAAATATTCTCGGCACGTGCCAATTCGAAAGCATTATTCCAAGTTT-CAAC
droVir3 scaffold_13042:3591900-3592240 - GCAGCTGATCAATGCCGCCAGCTGCCAGACCGCGGAGCGTGAGTCGCTCGATGGTCTGGCCATATTTACCATGTAAGTATTG---------CC--AAATGCTGCACT---GCAT----CCA-T----TC--ATC---CAG--CCAGCT-------AATGCATATGTACTTACAGCGTGCTCATGTGTGTCTTGGTCGCTGCCCTGCTGCTGGCCACGCTCTACGATTACTTCCTGTGCGCGGATCAGAGTAAGTAGCTAAGCA---T--AA-T--CCCGCTG---CTGC-------TG----T-GTCT-GAT-C-----------GAGACG-----A--TCTCCTTGCAGAGCATTTGCCCGCCTTGGTCAAGGTGTTTTCGGCACGTGCCAATTCGCGCGCGCTCTTCCGCATTGTGGAC
droMoj3 scaffold_6308:816867-817211 - GCAGTTGATCACGGCTGGCGAGTGCGATACTGCAGAGCAGGAGCCGCTCGATGGCCTGGCCATATTTACCATGTAAGTGCCGAAAC------T--CT--GCTGCAGT---ACGTTCGATTG-T---------TGCTCA----TCCACA-------AGTGTC-TTCGCTTTTCAGCGTGCTCTTTGGCGTCTTCGTAGTGGCCATGCTCTTGGCCACCTGCTGGGATTACTTTCTGTGCAAGGATCAGAGTAAGTAGCTGCAGT-A-C--AAT-----TCC------------CATGGAA--------------ACTATT---TCACG-T--CCCTCTTCCACTCCTCCAGAGCACTTACCCACCATGGTCAAGATATTTTCGGCACGAGCAAATTCACGTTCACTGTTCCGTACCGTGGAT
droGri2 scaffold_14906:2441271-2441604 + GTTG---GTAAGAGAGATCGGATGTCGGACGTCCGACCGAGAGCCTATCGATGGTCTAACTATATTCACAATGTGAGTATTGAAT------CG--ATA--TCATAATA-TTTAT-------------TTACATT---T----CGATTG------AATTGG--TTTCGTTAACAGTATTCTAGTCTCACTTTTGCTTGCTGCTGTTCTCTTGGCCATGTCCTACGATTATTTATGCTGCGAGAATCAGAGTAAGTTGCGAACTAAGAATGAA-GAG-------------TC----CTTA-------ATT-GTT-A-----------ATTTCA-----T--TTCATTTACAGAACAATTACCCGTCTTGGTTAAGATCTTCTCGGCACGCGCCAATTCCCGAGCGCTGTTTCGGCTCGTGCAG
droAna3 scaffold_13340:20115966-20116297 + CAAA---ATCAACGAAAGTGGTTGCCAAACAAGTGAAAAGGATCCATGGGATGGTCTAACAATTTTCACAATGTAAGTAACGAAAA------T----A--------T--GAAAC----CCAGC----C-----A--------TATTTGTAGTATTCATTC--ACTACATTTTAGAGTTCTATTGTCAGTACTAAGTACATTTGTGATAATTGCAACGCTCTACGATTATTTTCTTTGCAAGGATCAGAGTGAGTTGTTTAACAA--A--TA----ACACAAAATAAAACG-------A----T-TTTT-GAC-A-----------ATTAAA-----T--TCTGTTTTAAGGTCAACTGCCAGTCATTGTAAAGTCATTTTCTGCCAGAGCCAACTCCAGAGCACTATTTAAAGTT---GAA
droBip1 scf7180000396413:2284365-2284703 - AAAT---ATTGATGAAAACGGTTGCCAGACCAGCGAGTCTGAGCCCTGGGATGGTCTGACTATTTTTACAGTGTAAGTTCTCAAAA------A---TA-ACTGATTG---ATAAGCAAT---C---------TA--------TATACTTACAATACTTTC--TTTCTATTAAAGTGTATTTTTGTCGCTTTTAACTTTGATTGTCGCTATCTGCACCTTGTACGACTATTTTCTGAGTAGCGATCAAAGTAAGTGCCAAACAGAGAT--TG-CAA--------TAAAGTG--TTCAAA-----------GGC-T-------------------CATAAGTTTGATTTCAGAAAAGCTTCCCCTATTAGTCAAGATTATCTCGGCTCGGGCCAACTCTCGAGCACTTTTCCGCGTTTCGGAC
droKik1 scf7180000302639:3159697-3160022 + CAGT---ATCGATGAAGACGGTTGCCAGACGAGCGAATCTGAGCCCTGGGACTGGCTTACTATTTTTACAGTGTAAGCAAAG---------AT--TAAT-------C---AAAG--------G----TGGATAC-------------CTCGAACTGATGT--ATTTTATTGCAGTGTTATTCTGTCGCTGCTAACTTTCATAGTGGCTTTGTGCACTCTCTACGACTACTTTCTGTGTCCAAATCAAAGTGAGTAATTTAAAGG--A--CA----TTTTTTG----------TTTAAA----T-AAT-T-CCTAA----------AT-C-----C-T--ATCCTCTTTAGAGCAACTTCCAGCTTTGGTGAAGATTATATCGGCCAGGGCCAATTCTCGAGCTCTTTTCCGCGTGGTGGAT
droFic1 scf7180000453906:424346-424668 + GAGT---ATCAGCGAAAGCAGTTGCCAGACCAGCGAAAGTGAACCCTGGGATGGACTCACCATTTTTATGATGTAAGTGTGT---------AG--ACG--------T--CTTAA-------------TCTTTTC--------CCGACT-------AACGC--CTTTGATTATAGAGTGATGTTATCGGTGATGGGCGGCCTGGTAGCTTTGTTTACGTTGTGGGACTACTGTCTGGTCAAGAATCAGGGTGAGTTAACATAAA-A-T--TAT-----CGA------------TCCGTACCTGT-TTT-C-ACAAT----------G-------AATC--GTTTGCTTTAGATCATCTCCCCACAATCGTAAAGGTATTTTCCGCGAGGGCAAACTCTAGAGCTCTATTTCGAATTGT-GCC
droEle1 scf7180000491261:151678-151995 + GAGT---ATCAGCGATAGTTCTTGCCAGACCAATGAGAAAGAACCCTGGAATGCCCTCACTATTTTAACTATGTAAGTTCTT---------CTTTACT--------C---GTAA--------T----TCAATAG--------TTTGCT-------AAGCT--TTTTTATTACAGAGTAATCCTATCATTGATGGGGTTCATTGTGGCTCTTTTCACGCTGTACGACTTTTTCTTGTGCAAGAATCAAGGTGAATAACACCTAA-A-T--TT---T-------------TGATTTCCGA--------------AAC----------T-------AATAATATCTTTTACAGATCAGCTTCCCCTGATAGTCAAGGTGTTTTCGGCCAGGGCCAACTCGCGTGCTTGTTTCCGCATCGTGCCG
droRho1 scf7180000778035:2842-3173 - AACA---GTCAGCGATTCCAGTTGCCAGACCAGCGAAAGTGAACCCTGGGATGGACTCACCATTTTTATGGTGTAAGTGTGA---------CG--ACA--------T--TTTAA----TTG-TTTAATTATTTT--------ATGGCT-------AACACC-TACTGATTGCAGAACTATCTTATCGGTGTTGGGTTCCCTGGTGGCTTTGTTTACGCTGTGGGACTATTTTCTAATCACGGATCAAGGTGATTATTCACGTAAC-T--TAT-----CTGTG----------TTTTAG----A-ACT-C-ACTAT----------A-------ATTA--TTAACCTATAGATAGGATTCCTGCAATCGTAAAGGTCTTTTCGGCCAGGGTCAACTCCCGCACGCTCTTTCGCGTTGTGGAA
droBia1 scf7180000302075:4959905-4960236 - AACC---ATAGATGAAACGGGTTGCCAAACAAGCGATCCTGAGCCTTGGGATGGCCTCACCATTTTTGCAATGTAAGTAAAC---------ATTAATT-ACCAAATAT-TTTAA----AAG-T---------TG--------CACACT-------TACAA--TTTTGTTTACAGTGTGATCTTATCACTGCTGACTTTAATAGTGACTTGTTGCACTTTTTACGACTACTTTCTGTGTGAAAATCAAAGTGAGTAATTTTTAA-G-G--AAT-----TTC------------TTAAGCT--------------ATGATA---GCAAA-T--TGCT-T--ATCCATTTTAGAACAACTTCCAGCCCTGGTCAAGATTATATCGGCTAGGGCTAATTCCCGAGCCCTTTTCCGTCTTATAGAC
droTak1 scf7180000415376:273049-273374 - GAGT---ATCAGCGATAGCAGCTGCCAGACAAGTGAAAGCGAGCCCTGGGATGGACTAACCATATTTACCATGTGAGTGCCC---------TA--GTA--------A-TTGTAC----CCA-T----C--AAAG--------TTGACT-------AACCC--TTCCGATTTCAGAGTGTTCTTATCGCTGATGGGCTCTATCGTGGCGGTCTGCACGCTTTACGACTATTTCGTGAGCAAGAATCAAAGTGAGTTATTCAGCTC--A--G--TTA-------------TAATTCCCGA--------------AATACTAGAAT--A-------ATCC--CTATCTCCCAGGTCAACTTCCTGCGTTTGTCAAGGTCTTTTCGGCCAGGGTCAATTCCCGAGCTCTTTTCCGCCTCGTGGAG
droEug1 scf7180000409672:3573095-3573418 - GAGT---ATCAGCGATGGTAGCTGCCAGACAAGTGAAAGTGAACCCTGGGATGGACTCACCATTTTCATGATGTAAGGGAAC---------CA--AAA--------C--TTTTT-------------TACACTT--------TTGGCT------AAATAT--TCTCTTTTGTAGAGTTTTCTTATCGATAATGGGTTCTCTGGTGACCTTGTTTACTCTATGGGACTACTTCCTGGTCAAGAACCAAAGTGAGTAACTTAGAA-A-C--GAT-----CTT------------TCTGATTGGAA-CTT-A-ACAAA----------G-------TT-T--TGTACTTTTAGATCAAATTCCTCCCATTGTAAAGATGTTCTCAGCCAGAGCCAGCTCCCGTGCCCTATTTCGAGTTGTAGAA
dm3 chr2R:9011295-9011618 + GAGA---ATCAGTGAAGGCAGCTGTCAGACCAGTGATAGTGAGCCCTGGGATGCCCTCACCATTTTTATGATGTAAGTCCTT---------CG--AAG--------C--TTCAT-------------TCCACTT--------TGGGCT-------AACTC--TTTTGTTTCCAGAGTTATTTTATCCTTAATGAGTTTCATAGTGGCATTATCTACTCTGTGGGACTACTTTCTAGTCAAAGATCAGGGTAAGTTAACCGATAA--T--AA-GAG-------------TCCTTATGGA----T-ATTT-TAT-A-----------CTTTTA-----A--TCGACCTTCAGATCAGCTTCCGGCCATTGTGAAGATCTGTTCAGCCCGGTCCAATTCTCGAGCCCTATTTCGCGTTGTAGAA
droSim2 3r:18958849-18959174 - dsi_7449 GAGT---ATCAGCGAATCCAGTTGTCAAACTAGTGAAAGTGTACCATGGGACGGACTCACCATTTTTATGATGTAAGTGCGC---------AG--ACA--------T--TTTAA-------------TCAGCTC--------TCGGCT-------AATGC--TTCTGATTACAGAGTGATCTTATCGTTAATGGGCTCTTTAGTGGCTTTGTTTACCTTGTGGGACTACTGTCTGGGGAAGAATCAGGGTGAGTAAACAAAAT-C-T--TAT-----CGA------------TCTGATTCAAA-TTT-C-ACAAT----------G-------CTTAGTAAACTTTCCAGACCAGCTTCCCGCCATTGTAAAAGTGTTTTCGGCCAGGGTCAATTCTCGTGCTCTCTTTCGCATTGTAGAG
droSec2 scaffold_1:6538265-6538588 + GACA---ATCAGCGAAGGCAGCTGCCAGACCAGTGATAGTGAGCCCTGGGATGGACTCACCATATTTATGATGTAGGTCCTT---------TA--AAG--------C--TTCAT-------------TCCACTT--------TGGGCT-------AACTC--TTTTGTTTCCAGAGTTATTTTATCCGTAATGAGTTTCATAGTGACATTATTTACTCTGTGGGACTACTTTCTAGTCAAAGATCAGGGTAAGTTAGCCGCTAA--T--AA-GAG-------------TCCTTGTGGA----T-ATTA-TAT-A-----------CTTTCA-----A--TCCACCTTCAGCTCAGCTTCCGGACATTGTGAAGATTTTTTCAGCTCGGGCCAATTCTCGAGCCCTATTTCGCGTTGTAGAA
droYak3 3R:20301375-20301703 - GAGT---ATCAGCGAGTCCAGTTGCCAGACTAGTGAAAGTGAACCCTGGGACGGACTCACCATTTTTATGATGTAAGTGCTGCGC------AG--ACT--------T--TCTAA-------------TCAATAG--------TCGGCT-------AATGC--TGCTGATTACAGAGTGATCTTATCGGTGATGTTCTGCTTAGTGGCTTTGTTTACGTTGTGGGACTACTGTCTGGTGAAGAATCAGGGTGAGTAAACAAAAT-C-T--TAT-----CGA------------TCCGAATAAAT-TCT-C-TAAAC----------G-------ATTAGCGAACTTTTCAGAACAACTTCCCACCATTGTAAAGATATTTTCGGCTAGGGCCCACTCACGAGCTCTATTTCGCATTGTAGAA
droEre2 scaffold_4820:8629188-8629512 + GAGT---ATCAGCGAGTCCAGTTGCCAGACCAGTGAGCGTGAACCCTGGGACGGACTCACCATTGCTATGATGTAAGTGGCG---------C---ACT--------T--TTTAA-------------TCAGTTT--------TCGGCT-------AATGC--CTCTGATTACAGAGTGATCTTATCGGTGATGGGCTTCTTAGTGGCTGGGTTTACCATGTGGGACTACTGTGTGGTCAAGAATCAGGGTGAGTAAACAAAAT-C-T--TAT-----CGA------------TCCGAGTTAAT-TTT-C-AGCAC----------G-------ATTAGTAAACTTTTCAGACCACATACCCAGCATTGTAAAGGTGTTTTCGGCCAGGGCCAACTCACGTGCTCTGTTTCGCATTGTAGCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
AAAA---TTCAGCGAGGCCAGCTGTCAGACAAGTGACAGACA-------------------GCTGTCACAGTGTAAGTTAGA---------CC--GTAT-------C---ATAA--------T----CAAATTC--------TGTG------ACTCATAC--TATGGATTGCAGTGTACTTCTTGGCTTGATGGGTACTATCGTGGGTCTATGCACGCTCTACGACTACTTTCTGTGCCAGGATCAGAGTGAGTAACGGAGAGA--A--CG-GAA-------------TGATTAACAA--------------AATGATT---TAACT-C-----GTATTTTGCCTACCAGGT---------------------AGTATCACGGCACGGTCAAGTTCCCGTGCCATCTTCCGCATTATCGACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................................................................................................................................CTATGCACGCTCTACGACT..................................................................................................................................................................................................19170.183300000
....................................................................................................................................................................................................................GCACGCTCTACGACTACTTTCTGT.........................................................................................................................................................................................24130.152200000
.........................................................................................................................................................................................................................CTCTACGACTACTTTCTGTGCC......................................................................................................................................................................................22130.152200000
.................................................................................................................................................................................................................................CTACTTTCTGTGCCAGGAT.................................................................................................................................................................................19140.142200000
.......................................................................................................................................................................................................................CGCTCTACGACTACTTTCTGTGCCAGG...................................................................................................................................................................................27120.081100000
......................................................................................................................................................................................................................................TTCTGTGCCAGGATCAGAGTAGT........................................................................................................................................................................23140.071000001
...................................................................................................................................................................................................................................ACTTTCTGTGCCAGGATCAGA.............................................................................................................................................................................21140.071010000
.............................................................................................................................................................................................................................ACGACTACTTTCTGTGCCAGGATC................................................................................................................................................................................24140.071010000
...................................................................................................................................................................................................................................ACTTTCTGTGCCAGGATC................................................................................................................................................................................18140.071010000
................................................................................................................................................................................................................CTATGCACGCTCTACGACTAC................................................................................................................................................................................................21170.061100000
..........................................................................................................................................................................................................................TCTACGACTACTTTCTGG.........................................................................................................................................................................................18190.051100000
..................................................................................................................................................................................CTTCTTGGCTTGATGGGTACT..............................................................................................................................................................................................................................21200.051001000
..................................................................................................................................................................................CTTCTTGGCTTGATGGGTA................................................................................................................................................................................................................................19200.051001000
dp5
AAAA---TTCAGCGAGGCCAGCTGTCAGACAAGTGAATCGAAACCTTGGGATGGAATGACCATTTTCACAGAGTAAGTTAGA---------CC--GTAT-------C---ATAA--------T----CAAATTC--------TGTG------ACTCATAC--TATGGATTGCAGTGTACTTCTTGGCTTGAAGGGTACTATCGTGGGTCTATGCACGCTCTACGACTACTTTCTGTGCCAGGATCAGAGTGAGTAACGGAGAGA--A--CG-GAA-------------TGATTTACAA--------------AATGATT---TAACT-C-----GTATTTTGCCTACCAGGTAGTATTCTTGTGACTGTGAAGATTTGCTCGGCACGGTCAAGTTCCCGTGCCATCTTCCGCATTGTCGACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................................................................................................................................................................................GTGGGTCTATGCACGCTCTACGA....................................................................................................................................................................................................2341.0040400000000
........TCAGCGAGGCCAGCTGTCAGACA......................................................................................................................................................................................................................................................................................................................................................................................................2320.5010000100000
............................................................................................................................................................................................................GGGTCTATGCACGCTCTACGA....................................................................................................................................................................................................2140.5020200000000
.........................................AACCTTGGGATGGAATGACC........................................................................................................................................................................................................................................................................................................................................................................2020.5010000100000
.............GAGGCCAGCTGTCAGACA......................................................................................................................................................................................................................................................................................................................................................................................................1820.5010100000000
................................................................................................................................................................................................................CTATGCACGCTCTACGACTACTTTCTGT.........................................................................................................................................................................................2840.5020110000000
.....................................................................................................................................................................................................................CACGCTCTACGACTACTTTCTGC.........................................................................................................................................................................................2340.2510010000000
...........................................................................................................................................................................................................................CTACGACTACTTTCTGTGC.......................................................................................................................................................................................1940.2510100000000
..........................................................................................................................................................................................................GTGGGTCTATGCACGCTCT........................................................................................................................................................................................................1940.2510010000000
................................................................................................................................................................................................................CTATGCACGCTCTACGACTACTTTCT...........................................................................................................................................................................................2640.2510100000000
............................................................................................................................................................................................................GGGTCTATGCACGCTCTA.......................................................................................................................................................................................................1840.2510100000000
..........................................................................................................................................................................................................GTGGGTCTATGCACGCTCTAC......................................................................................................................................................................................................2140.2510100000000
.......................................................................................................................................................................................................................CGCTCTACGACTACTTTCTGT.........................................................................................................................................................................................2140.2510100000000
................................................................................................................................................................................................................CTATGCACGCTCTACGACTA.................................................................................................................................................................................................2050.2010100000000
................................................................................................................................................................................................................CTATGCACGCTCTACGACT..................................................................................................................................................................................................1950.2010100000000
droWil2
GAAT---T------------CTTGCAAGGTAGCAGAAAAGGACTCCTTTGATGGCCTTACCATATTCACAATGTAAGCTAGAGAAATCCTTAA--------CAAATT---GTAA----TTG-T----T--AATT---GAGAATTATTT-------GA-----TGAATTTTGCAGCGTTTTCCTTTCTGTGGTTGCTGGAATTGTCGGCTTGTCCACCCTCTATGATTACTTTTTGTGCCAAGATCAGAGTGAGTAATCAAAAAA--A--AA-AAC--TCAAAATGAAGTC-------A----ATGGT--CAT-------------------TACTTATTTAAAATTTCAGCAAAAGTCCCCGTTCTGATTAAAATATTCTCGGCACGTGCCAATTCGAAAGCATTATTCCAAGTTT-CAACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................................GAAAAGGACTCCTTTGATGGCCT............................................................................................................................................................................................................................................................................................................................................................................2311.00100100
..............................................................................................................................................................................CGTTTTCCTTTCTGTGGTT....................................................................................................................................................................................................................................1911.00100010
................................................................................................................................................................................................................................................................................................................................................................................................ACGTGCCAATTCGAAAGC...................1811.00100010
.....................................................................................................................................................................................................................................TTTTTGTGCCAAGATCAGA.............................................................................................................................................................................1911.00100010
..............................................................................................................................................................................................GTTGCTGGAATTGTCGGCTT...................................................................................................................................................................................................................2011.00100010
...............................................................................................................................................................................GTTTTCCTTTCTGTGGTTGCTGG...............................................................................................................................................................................................................................2311.00100010
droVir3
GCAGCTGATCAATGCCGCCAGCTGCCAGACCGCGGAGCGTGAGTCGCTCGATGGTCTGGCCATATTTACCATGTAAGTATTG---------CC--AAATGCTGCACT---GCAT----CCA-T----TC--ATC---CAG--CCAGCT-------AATGCATATGTACTTACAGCGTGCTCATGTGTGTCTTGGTCGCTGCCCTGCTGCTGGCCACGCTCTACGATTACTTCCTGTGCGCGGATCAGAGTAAGTAGCTAAGCA---T--AA-T--CCCGCTG---CTGC-------TG----T-GTCT-GAT-C-----------GAGACG-----A--TCTCCTTGCAGAGCATTTGCCCGCCTTGGTCAAGGTGTTTTCGGCACGTGCCAATTCGCGCGCGCTCTTCCGCATTGTGGACSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................TGGTCAAGGTGTTTTCGGCAC...................................2111.001000100000000000000000000000000000000000000000000000000000000000
......................TGCCAGACCGCGGAGCGTGAGTC........................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000001000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................CGCTCTACGATTACTTCCTGTGCGC.....................................................................................................................................................................................2511.001000000000000000000000000000000001000000000000000000000000000000
........................................................................................................................................................................................................................GCTCTACGATTACTTCCTGT.........................................................................................................................................................................................2011.001000000000000000000000000000000000000100000000000000000000000000
.....................................CGTGAGTCGCTCGATGGTCTGGC.........................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
........................................................TGGCCATATTTACCC..............................................................................................................................................................................................................................................................................................................................................................15140.071000000000000000000000000000000000000000000001000000000000000000
droMoj3
GCAGTTGATCACGGCTGGCGAGTGCGATACTGCAGAGCAGGAGCCGCTCGATGGCCTGGCCATATTTACCATGTAAGTGCCGAAAC------T--CT--GCTGCAGT---ACGTTCGATTG-T---------TGCTCA----TCCACA-------AGTGTC-TTCGCTTTTCAGCGTGCTCTTTGGCGTCTTCGTAGTGGCCATGCTCTTGGCCACCTGCTGGGATTACTTTCTGTGCAAGGATCAGAGTAAGTAGCTGCAGT-A-C--AAT-----TCC------------CATGGAA--------------ACTATT---TCACG-T--CCCTCTTCCACTCCTCCAGAGCACTTACCCACCATGGTCAAGATATTTTCGGCACGAGCAAATTCACGTTCACTGTTCCGTACCGTGGATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.................................AGAGCAGGAGCCGCTCGAT.................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
droGri2
GTTG---GTAAGAGAGATCGGATGTCGGACGTCCGACCGAGAGCCTATCGATGGTCTAACTATATTCACAATGTGAGTATTGAAT------CG--ATA--TCATAATA-TTTAT-------------TTACATT---T----CGATTG------AATTGG--TTTCGTTAACAGTATTCTAGTCTCACTTTTGCTTGCTGCTGTTCTCTTGGCCATGTCCTACGATTATTTATGCTGCGAGAATCAGAGTAAGTTGCGAACTAAGAATGAA-GAG-------------TC----CTTA-------ATT-GTT-A-----------ATTTCA-----T--TTCATTTACAGAACAATTACCCGTCTTGGTTAAGATCTTCTCGGCACGCGCCAATTCCCGAGCGCTGTTTCGGCTCGTGCAGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
................................................................................................................................................................................................................................ATTATTTATGCTGCGAGAAT.................................................................................................................................................................................2011.00101
.................................................................................................................................................................................................................................TTATTTATGCTGCGAGAATCAGAA............................................................................................................................................................................2411.00110
droAna3
CAAA---ATCAACGAAAGTGGTTGCCAAACAAGTGAAAAGGATCCATGGGATGGTCTAACAATTTTCACAATGTAAGTAACGAAAA------T----A--------T--GAAAC----CCAGC----C-----A--------TATTTGTAGTATTCATTC--ACTACATTTTAGAGTTCTATTGTCAGTACTAAGTACATTTGTGATAATTGCAACGCTCTACGATTATTTTCTTTGCAAGGATCAGAGTGAGTTGTTTAACAA--A--TA----ACACAAAATAAAACG-------A----T-TTTT-GAC-A-----------ATTAAA-----T--TCTGTTTTAAGGTCAACTGCCAGTCATTGTAAAGTCATTTTCTGCCAGAGCCAACTCCAGAGCACTATTTAAAGTT---GAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................GTTCTATTGTCAGTACTAAGT.................................................................................................................................................................................................................................2111.001010000
..................................GAAAAGGATCCATGGGAC.................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
............................ACAAGTGAAAAGGATCCATGGGATGGT..............................................................................................................................................................................................................................................................................................................................................................................2711.001010000
....................................AAAGGATCCATGGGATGGT..............................................................................................................................................................................................................................................................................................................................................................................1911.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................GCCAACTCCAGAGCACTATTTAAAGT.......2611.001010000
......................................................................................................................................................................................................ATTTGTGATAATTGCAACGCTCTACGA....................................................................................................................................................................................................2711.001010000
....................................AAAGGATCCATGGGATGGTC.............................................................................................................................................................................................................................................................................................................................................................................2011.001010000
...............................................................................................................................................................................................................................................................................................................................................................................GTAAAGTCATTTTCTGCCAGA.................................2121.002110000
...................................AAAAGGATCCATGGGATGGT..............................................................................................................................................................................................................................................................................................................................................................................2011.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................ACTCCAGAGCACTATTTAAAGT.......2211.001100000
..................................GAAAAGGATCCATGGGATGGT..............................................................................................................................................................................................................................................................................................................................................................................2111.001010000
................................GTGAAAAGGATCCATGGGATGGTC.............................................................................................................................................................................................................................................................................................................................................................................2411.001010000
.............................................................................................................................................................................................ACTAAGTACATTTGTGATAATTGC................................................................................................................................................................................................................2411.001001000
..................................GAAAAGGATCCATGGGATGGC..............................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.............................................................................................................................................................................................ACTAAGTACATTTGTGATAAT...................................................................................................................................................................................................................2111.001001000
..........................AAACAAGTGAAAAGGATCC........................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
..................................................................................................................................................................................CTATTGTCAGTACTAAGTA................................................................................................................................................................................................................................1911.001010000
............................................................................................................................................................................................................GATAATTGCAACGCTCTACGATT..................................................................................................................................................................................................2320.501010000
..........AACGAAAGTGGTTGCCAAACA......................................................................................................................................................................................................................................................................................................................................................................................................2120.501010000
...........................................................................................................................................................................................................................................................................................................................................................................CATTGTAAAGTCATTTTCTGCC....................................2220.501010000
......................................................................................................................................................................................................................................................................................................................................................................................CATTTTCTGCCAGAGCCAACTCCAGAGC...................2820.501010000
........................................................................................................................................................................................................................GCTCTACGATTATTTTCTTT.........................................................................................................................................................................................2020.501010000
............................................................................................................................................................................................................GATAATTGCAACGCTCTACGATTAT................................................................................................................................................................................................2520.501010000
...............................................................................................................................................................................................................................GATTATTTTCTTTGCAAGGATCAGAGT...........................................................................................................................................................................2720.501010000
.................................................................................................................................................................................................................................................................................................................................................................................AAAGTCATTTTCTGCCAGAGCC..............................2220.501010000
...............................................................................................................................................................................................................................................................................................................................................................................GTAAAGTCATTTTCTGCCAGAGC...............................2320.501001000
.............GAAAGTGGTTGCCAAACAAGTGA.................................................................................................................................................................................................................................................................................................................................................................................................2320.501010000
droBip1
AAAT---ATTGATGAAAACGGTTGCCAGACCAGCGAGTCTGAGCCCTGGGATGGTCTGACTATTTTTACAGTGTAAGTTCTCAAAA------A---TA-ACTGATTG---ATAAGCAAT---C---------TA--------TATACTTACAATACTTTC--TTTCTATTAAAGTGTATTTTTGTCGCTTTTAACTTTGATTGTCGCTATCTGCACCTTGTACGACTATTTTCTGAGTAGCGATCAAAGTAAGTGCCAAACAGAGAT--TG-CAA--------TAAAGTG--TTCAAA-----------GGC-T-------------------CATAAGTTTGATTTCAGAAAAGCTTCCCCTATTAGTCAAGATTATCTCGGCTCGGGCCAACTCTCGAGCACTTTTCCGCGTTTCGGACSizeHit CountTotal NormTotal
No Reads
droKik1
CAGT---ATCGATGAAGACGGTTGCCAGACGAGCGAATCTGAGCCCTGGGACTGGCTTACTATTTTTACAGTGTAAGCAAAG---------AT--TAAT-------C---AAAG--------G----TGGATAC-------------CTCGAACTGATGT--ATTTTATTGCAGTGTTATTCTGTCGCTGCTAACTTTCATAGTGGCTTTGTGCACTCTCTACGACTACTTTCTGTGTCCAAATCAAAGTGAGTAATTTAAAGG--A--CA----TTTTTTG----------TTTAAA----T-AAT-T-CCTAA----------AT-C-----C-T--ATCCTCTTTAGAGCAACTTCCAGCTTTGGTGAAGATTATATCGGCCAGGGCCAATTCTCGAGCTCTTTTCCGCGTGGTGGATSizeHit CountTotal NormTotal
No Reads
droFic1
GAGT---ATCAGCGAAAGCAGTTGCCAGACCAGCGAAAGTGAACCCTGGGATGGACTCACCATTTTTATGATGTAAGTGTGT---------AG--ACG--------T--CTTAA-------------TCTTTTC--------CCGACT-------AACGC--CTTTGATTATAGAGTGATGTTATCGGTGATGGGCGGCCTGGTAGCTTTGTTTACGTTGTGGGACTACTGTCTGGTCAAGAATCAGGGTGAGTTAACATAAA-A-T--TAT-----CGA------------TCCGTACCTGT-TTT-C-ACAAT----------G-------AATC--GTTTGCTTTAGATCATCTCCCCACAATCGTAAAGGTATTTTCCGCGAGGGCAAACTCTAGAGCTCTATTTCGAATTGT-GCCSizeHit CountTotal NormTotal
No Reads
droEle1
GAGT---ATCAGCGATAGTTCTTGCCAGACCAATGAGAAAGAACCCTGGAATGCCCTCACTATTTTAACTATGTAAGTTCTT---------CTTTACT--------C---GTAA--------T----TCAATAG--------TTTGCT-------AAGCT--TTTTTATTACAGAGTAATCCTATCATTGATGGGGTTCATTGTGGCTCTTTTCACGCTGTACGACTTTTTCTTGTGCAAGAATCAAGGTGAATAACACCTAA-A-T--TT---T-------------TGATTTCCGA--------------AAC----------T-------AATAATATCTTTTACAGATCAGCTTCCCCTGATAGTCAAGGTGTTTTCGGCCAGGGCCAACTCGCGTGCTTGTTTCCGCATCGTGCCGSizeHit CountTotal NormTotal
No Reads
droRho1
AACA---GTCAGCGATTCCAGTTGCCAGACCAGCGAAAGTGAACCCTGGGATGGACTCACCATTTTTATGGTGTAAGTGTGA---------CG--ACA--------T--TTTAA----TTG-TTTAATTATTTT--------ATGGCT-------AACACC-TACTGATTGCAGAACTATCTTATCGGTGTTGGGTTCCCTGGTGGCTTTGTTTACGCTGTGGGACTATTTTCTAATCACGGATCAAGGTGATTATTCACGTAAC-T--TAT-----CTGTG----------TTTTAG----A-ACT-C-ACTAT----------A-------ATTA--TTAACCTATAGATAGGATTCCTGCAATCGTAAAGGTCTTTTCGGCCAGGGTCAACTCCCGCACGCTCTTTCGCGTTGTGGAASizeHit CountTotal NormTotal
No Reads
droBia1
AACC---ATAGATGAAACGGGTTGCCAAACAAGCGATCCTGAGCCTTGGGATGGCCTCACCATTTTTGCAATGTAAGTAAAC---------ATTAATT-ACCAAATAT-TTTAA----AAG-T---------TG--------CACACT-------TACAA--TTTTGTTTACAGTGTGATCTTATCACTGCTGACTTTAATAGTGACTTGTTGCACTTTTTACGACTACTTTCTGTGTGAAAATCAAAGTGAGTAATTTTTAA-G-G--AAT-----TTC------------TTAAGCT--------------ATGATA---GCAAA-T--TGCT-T--ATCCATTTTAGAACAACTTCCAGCCCTGGTCAAGATTATATCGGCTAGGGCTAATTCCCGAGCCCTTTTCCGTCTTATAGACSizeHit CountTotal NormTotal
No Reads
droTak1
GAGT---ATCAGCGATAGCAGCTGCCAGACAAGTGAAAGCGAGCCCTGGGATGGACTAACCATATTTACCATGTGAGTGCCC---------TA--GTA--------A-TTGTAC----CCA-T----C--AAAG--------TTGACT-------AACCC--TTCCGATTTCAGAGTGTTCTTATCGCTGATGGGCTCTATCGTGGCGGTCTGCACGCTTTACGACTATTTCGTGAGCAAGAATCAAAGTGAGTTATTCAGCTC--A--G--TTA-------------TAATTCCCGA--------------AATACTAGAAT--A-------ATCC--CTATCTCCCAGGTCAACTTCCTGCGTTTGTCAAGGTCTTTTCGGCCAGGGTCAATTCCCGAGCTCTTTTCCGCCTCGTGGAGSizeHit CountTotal NormTotal
No Reads
droEug1
GAGT---ATCAGCGATGGTAGCTGCCAGACAAGTGAAAGTGAACCCTGGGATGGACTCACCATTTTCATGATGTAAGGGAAC---------CA--AAA--------C--TTTTT-------------TACACTT--------TTGGCT------AAATAT--TCTCTTTTGTAGAGTTTTCTTATCGATAATGGGTTCTCTGGTGACCTTGTTTACTCTATGGGACTACTTCCTGGTCAAGAACCAAAGTGAGTAACTTAGAA-A-C--GAT-----CTT------------TCTGATTGGAA-CTT-A-ACAAA----------G-------TT-T--TGTACTTTTAGATCAAATTCCTCCCATTGTAAAGATGTTCTCAGCCAGAGCCAGCTCCCGTGCCCTATTTCGAGTTGTAGAASizeHit CountTotal NormTotal
No Reads
dm3
GAGA---ATCAGTGAAGGCAGCTGTCAGACCAGTGATAGTGAGCCCTGGGATGCCCTCACCATTTTTATGATGTAAGTCCTT---------CG--AAG--------C--TTCAT-------------TCCACTT--------TGGGCT-------AACTC--TTTTGTTTCCAGAGTTATTTTATCCTTAATGAGTTTCATAGTGGCATTATCTACTCTGTGGGACTACTTTCTAGTCAAAGATCAGGGTAAGTTAACCGATAA--T--AA-GAG-------------TCCTTATGGA----T-ATTT-TAT-A-----------CTTTTA-----A--TCGACCTTCAGATCAGCTTCCGGCCATTGTGAAGATCTGTTCAGCCCGGTCCAATTCTCGAGCCCTATTTCGCGTTGTAGAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................AGCTTCCGGCCATTGTGAAG................................................2014.0040000000000000000000000000000000000000000000000000000000001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................CATTGTGAAGATCTGTTCA.......................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
....................................................................................................................................TT--------TGGGCT-------AACTC--TTTTGTTTCCAG.......................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CAGTGATAGTGAGCCCTGGGATGG...............................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................GTCAGACCAGTGATAGTGA...........................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
....................................................................................................................................................................................................................................................................................................................................................................TTCCGGCCATTGTGAAGATCT............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................GGCATTATCTACTCTGTGGGA....................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................GATAGTGAGCCCTGGGATGGA..............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................CTCTGTGGGACTACTTTCT...........................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..................................................................................................................................................................................................................................................................................................................................................................................................GGTCCAATTCTCGAGCCCTAT..............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................CTTCCGGCCATTGTGAAGATCTGTTCA.......................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GTCAGACCAGTGATAGTGAGCC........................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
........................................................................................................................................................................................................................................CTAGTCAAAGATCAGGGTAAGTTAACCGA................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................GTTATTTTATCCTTAATGAGTTTC..............................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................ATTCTCGAGCCCTATTTCGCGT.......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................GTGAGCCCTGGGATC................................................................................................................................................................................................................................................................................................................................................................................1540.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................GATCTGTTCAGCCCGGTATC.............................2050.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................AAAGATCAGGGTAAGTTGTG...................................................................................................................................................................20110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
droSim2
GAGT---ATCAGCGAATCCAGTTGTCAAACTAGTGAAAGTGTACCATGGGACGGACTCACCATTTTTATGATGTAAGTGCGC---------AG--ACA--------T--TTTAA-------------TCAGCTC--------TCGGCT-------AATGC--TTCTGATTACAGAGTGATCTTATCGTTAATGGGCTCTTTAGTGGCTTTGTTTACCTTGTGGGACTACTGTCTGGGGAAGAATCAGGGTGAGTAAACAAAAT-C-T--TAT-----CGA------------TCTGATTCAAA-TTT-C-ACAAT----------G-------CTTAGTAAACTTTCCAGACCAGCTTCCCGCCATTGTAAAAGTGTTTTCGGCCAGGGTCAATTCTCGTGCTCTCTTTCGCATTGTAGAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................................................................................................GATCTTATCGTTAATGGGCT................................................................................................................................................................................................................................2012.00200200000000000000
...............................................................................................................................................................................GTGATCTTATCGTTAATGGGCT................................................................................................................................................................................................................................2211.00100100000000000000
...................................................................................................................................................................................................................................................................................................................................................................................AAGTGTTTTCGGCCAGGGT...............................1911.00100100000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TGCTCTCTTTCGCATTGTAGG.2111.00100100000000000000
...............................................................................................................................................................................GTGATCTTATCGTTAATGGGCG................................................................................................................................................................................................................................2211.00100100000000000000
...........................................................................................................................................................................................................................................................................................................................................................................CATTGTAAAAGTGTTTTCGGCCAGGGTC..............................2811.00100100000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TGCTCTCTTTCGCATTGTAGA.2111.00100100000000000000
..............................................................................................................................................................................AGTGATCTTATCGTTAATGGGCT................................................................................................................................................................................................................................2311.00100010000000000000
droSec2
GACA---ATCAGCGAAGGCAGCTGCCAGACCAGTGATAGTGAGCCCTGGGATGGACTCACCATATTTATGATGTAGGTCCTT---------TA--AAG--------C--TTCAT-------------TCCACTT--------TGGGCT-------AACTC--TTTTGTTTCCAGAGTTATTTTATCCGTAATGAGTTTCATAGTGACATTATTTACTCTGTGGGACTACTTTCTAGTCAAAGATCAGGGTAAGTTAGCCGCTAA--T--AA-GAG-------------TCCTTGTGGA----T-ATTA-TAT-A-----------CTTTCA-----A--TCCACCTTCAGCTCAGCTTCCGGACATTGTGAAGATTTTTTCAGCTCGGGCCAATTCTCGAGCCCTATTTCGCGTTGTAGAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................................................................................................................ATTTTATCCGTAATGAGTTTCATA...........................................................................................................................................................................................................................2411.0010100
droYak3
GAGT---ATCAGCGAGTCCAGTTGCCAGACTAGTGAAAGTGAACCCTGGGACGGACTCACCATTTTTATGATGTAAGTGCTGCGC------AG--ACT--------T--TCTAA-------------TCAATAG--------TCGGCT-------AATGC--TGCTGATTACAGAGTGATCTTATCGGTGATGTTCTGCTTAGTGGCTTTGTTTACGTTGTGGGACTACTGTCTGGTGAAGAATCAGGGTGAGTAAACAAAAT-C-T--TAT-----CGA------------TCCGAATAAAT-TCT-C-TAAAC----------G-------ATTAGCGAACTTTTCAGAACAACTTCCCACCATTGTAAAGATATTTTCGGCTAGGGCCCACTCACGAGCTCTATTTCGCATTGTAGAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................GAAAGTGAACCCTGGGACGGACTCACC........................................................................................................................................................................................................................................................................................................................................................................2713.00301200000000
..................................GAAAGTGAACCCTGGGACGGACT............................................................................................................................................................................................................................................................................................................................................................................2313.00300210000000
..................................GAAAGTGAACCCTGGGACGGACTCAC.........................................................................................................................................................................................................................................................................................................................................................................2612.00200200000000
......................................GTGAACCCTGGGACGGACC............................................................................................................................................................................................................................................................................................................................................................................1912.00200200000000
.................................................................................................................................................................................................................................................................................................................................................................................AAAGATATTTTCGGCTAGGGCCC.............................2312.00200200000000
...T---ATCAGCGAGTCCAGTTGCCAGACT......................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010000000
.........................................AACCCTGGGACGGACTCACC........................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................CCCACTCACGAGCTCTATTTCGC.........2311.00100100000000
......................................GTGAACCCTGGGACGGACTCACC........................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
................................................................................................................................................................................................................................................................................................................................................................CAACTTCCCACCATTGTAAAGAT..............................................2311.00101000000000
.................................................................................................................................................................................................................................CTACTGTCTGGTGAAGAATCA...............................................................................................................................................................................2121.00200000020000
...................................................................................................................................................................................................CTGCTTAGTGGCTTTGTTTACGTT..........................................................................................................................................................................................................2411.00101000000000
...........................GACTAGTGAAAGTGAACCCTGGGACGGAC.............................................................................................................................................................................................................................................................................................................................................................................2911.00100100000000
...............GTCCAGTTGCCAGACTAGT...................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000
.............................................................................................................................................................................................GATGTTCTGCTTAGTGGCTTTGTT................................................................................................................................................................................................................2411.00100100000000
...............................................................................................................................................................................................................................................................................................................................................................................GTAAAGATATTTTCGGCTAGGGCCC.............................2511.00100100000000
..........................................ACCCTGGGACGGACTCACCATT.....................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000
.....................................AGTGAACCCTGGGACGGACTCAC.........................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
................................GTGAAAGTGAACCCTGGGACGGACTC...........................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
.....................................AGTGAACCCTGGGACGGACTC...........................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
...........................GACTAGTGAAAGTGAACCCT......................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
......................................................................................................................................................................................................CTTAGTGGCTTTGTTTACGTTGTGGGA....................................................................................................................................................................................................2711.00101000000000
........................................GAACCCTGGGACGGACTCAC.........................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
..................................GAAAGTGAACCCTGGGACGGAC.............................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
..............................................................................................................................................................................................................................................................................................................................................................................TGTAAAGATATTTTCGGCTAGGGCC..............................2511.00100100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................CTCACGAGCTCTATTTCGC.........1911.00101000000000
.................................................................................................................................................................................................................................................................................................................................................................................AAAGATATTTTCGGCTAGG.................................1911.00101000000000
................................................................................................................................................................................................GTTCTGCTTAGTGGCTTTGT.................................................................................................................................................................................................................2011.00100010000000
..................................GAAAGTGAACCCTGGGAC.................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000
....................................................................................................................................................................................................................................................................................................................................................................................GATATTTTCGGCTAGGGCCCACTCA........................2511.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................CACTCACGAGCTCTATTTCGCATT......2411.00100100000000
...............................................................................................................................................................................................................................................................................................................................................................ACAACTTCCCACCATTGTAAAG................................................2211.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................GTAAAGATATTTTCGGCTAGG.................................2111.00101000000000
.............................................................................................................................................................................................GATGTTCTGCTTAGTGGCTTT...................................................................................................................................................................................................................2111.00100010000000
....................................................................................................................................................................................................................TTACGTTGTGGGACTACT...............................................................................................................................................................................................1811.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................ATTGTAAAGATATTTTCGGCTAGGGCC..............................2711.00100100000000
.............................................................................................................................................................................................................GCTTTGTTTACGTTGTGGGAC...................................................................................................................................................................................................2111.00100100000000
........................................GAACCCTGGGACGGACTCACC........................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
...................AGTTGCCAGACTAGTGAAA...............................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................TTCGGCTAGGGCCCACTCAC.......................2011.00101000000000
.................................................................................................................................................................................GATCTTATCGGTGATGTTCTGCTTAGT.........................................................................................................................................................................................................................2720.50101000000000
.......................................................................................................................................................................................ATCGGTGATGTTCTGCTTAGTGGC......................................................................................................................................................................................................................2420.50100100000000
......................................................................................................................................................................................................................................GTCTGGTGAAGAATCAGG.............................................................................................................................................................................1820.50101000000000
....................................................................................................................................................................................CTTATCGGTGATGTTCTGCTTAGC.........................................................................................................................................................................................................................2420.50100100000000
.................................................................................................................................................................................................................................CTACTGTCTGGTGAAGAATC................................................................................................................................................................................2020.50100100000000
..................................................................................................................................................................................................................................TACTGTCTGGTGAAGAATCAG..............................................................................................................................................................................2120.50101000000000
...................................................................................................................................................................................................................................ACTGTCTGGTGAAGAATCAGGGC...........................................................................................................................................................................2320.50100100000000
droEre2
GAGT---ATCAGCGAGTCCAGTTGCCAGACCAGTGAGCGTGAACCCTGGGACGGACTCACCATTGCTATGATGTAAGTGGCG---------C---ACT--------T--TTTAA-------------TCAGTTT--------TCGGCT-------AATGC--CTCTGATTACAGAGTGATCTTATCGGTGATGGGCTTCTTAGTGGCTGGGTTTACCATGTGGGACTACTGTGTGGTCAAGAATCAGGGTGAGTAAACAAAAT-C-T--TAT-----CGA------------TCCGAGTTAAT-TTT-C-AGCAC----------G-------ATTAGTAAACTTTTCAGACCACATACCCAGCATTGTAAAGGTGTTTTCGGCCAGGGCCAACTCACGTGCTCTGTTTCGCATTGTAGCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................................................................................................................TTACCATGTGGGACTACTGTGTG..........................................................................................................................................................................................2313.0030102000
..................................................................................................................................................................................................................GTTTACCATGTGGGACTACTGTGT...........................................................................................................................................................................................2412.0020001100
.................................................................................................................................................................................................................................................................................................................................................................................AAAGGTGTTTTCGGCCAGGGC...............................2112.0020200000
..............................................................................................................................................................................................ATGGGCTTCTTAGTGGCTGGG..................................................................................................................................................................................................................2111.0011000000
.................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGTTTCGCATTGTAGC.1911.0010100000
....................................................................................................................................................................................................................TTACCATGTGGGACTACTGTGT...........................................................................................................................................................................................2211.0010001000
.................................................................................................T--------T--TTTAA-------------TCAGTTT--------TCGGCT-------..........................................................................................................................................................................................................................................................................2011.0011000000
...................................................................................................................................................................................................................................................................................................................................................................................................GGCCAACTCACGTGCTCTGTTTCGC.........2511.0010100000
.......ATCAGCGAGTCCAGTTGCC...........................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000
...............................................................................................................................................................................................................................................................................................................................................................................GTAAAGGTGTTTTCGGCCAGGGCCAACT..........................2811.0010100000
..........................................ACCCTGGGACGGACTCACCATTGCT..................................................................................................................................................................................................................................................................................................................................................................2511.0010001000
......................................................................................................................................................................................................CTTAGTGGCTGGGTTTACCATGTGGGACT..................................................................................................................................................................................................2911.0010100000
..................................................................................................................................................................................................................GTTTACCATGTGGGACTACTGTGTG..........................................................................................................................................................................................2511.0010001000
.............................................................................................................................................................................................................................................................................................................................................................................................................CGTGCTCTGTTTCGCATTGTAGCA2411.0010001000
............................................................................................................................................................................................................................................................................................................................................................................ATTGTAAAGGTGTTTTCGGC.....................................2011.0010100000
.............................................................................................................................................................................................GATGGGCTTCTTAGTGGCTGG...................................................................................................................................................................................................................2111.0010000010
...............................................GGGACGGACTCACCATTGCTATGATAGT..........................................................................................................................................................................................................................................................................................................................................................2811.0011000000
.......ATCAGCGAGTCCAGTTGCCA..........................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001000
...............................................................................................................................................................................................................................................................................................................................................................................................CCAGGGCCAACTCACGTGC...................1911.0011000000
.............................................................................................................................................................................................GATGGGCTTCTTAGTGGCTGGG..................................................................................................................................................................................................................2211.0010001000
.......................................................................................................................................................................................................................................................................................................................................................................................GTTTTCGGCCAGGGCCAACTCACGTGC...................2711.0010100000

Generated: 06/08/2015 at 05:01 PM