ID:

dpe_1971

 Coordinate:

scaffold_647:803-953 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-20.5

Flybase annnotation

CDS [Dper\GL22232-cds]; exon [dper_GLEANR_431:2]; intron [Dper\GL22232-in]

Repeatable elements

NameClassFamilyStrand
GA-richLow_complexityLow_complexity+
(CGG)nSimple_repeatSimple_repeat+
mature
  1. scaffold_12092:49-69 +
  2. scaffold_2430:3016-3036 +
  3. dpe_1971  scaffold_647:811-831 +
  4. scaffold_7329:670-690 +
star
  1. scaffold_12092:158-180 +
  2. dpe_731  scaffold_1246:3595-3617 +
  3. scaffold_2430:3125-3147 +
  4. dpe_1971  scaffold_647:920-942 +
  5. scaffold_7329:780-802 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GTCATCGCCACCACCAACCGCAGCCCGTCTACGCTTCGGGTGCGGGGAGAGGAGAGAGAGTGAGAGTAGAGAAAGGGGAGGAGGAGGAGAAGAAGAAGAACCAAAACTTCAACATGAAGAAATCCGCGCGTCAGCAGCACCAACAGCAATCTCAATCTCAATTGAGAAAGGCAAATAAAAGAACAACCCCGACATCGACAGCATCGGCATCGGCGGCGTCATTGTCACCGCGGTCGTCGCCGCCGCCGTTC
**********************************************************................((((.(((............((((........))))............)))((((....)).)).......((..(((((((....)))))))...))..............))))************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V111
male body		 M021
embryo
 V042
embryo
..........................................................AGTGAGAGTAGAGAAAGGGGA............................................................................................................................................................................ 21 0 4 2.25 9 0 9 0 0
..........................................................AGTGAGAGTAGAGAAAGG............................................................................................................................................................................... 18 0 4 1.50 6 1 4 0 1
..........................................................AGTGAGAGTAGAGAAAGGGGAGG.......................................................................................................................................................................... 23 0 3 1.00 3 1 2 0 0
.......................................................................................................................................................................AAGGCAAATAAAAGAACAACCCC............................................................. 23 0 5 1.00 5 5 0 0 0
..........................................................................................................................TCCGCGCGTCAGCAGCACCAACAGC........................................................................................................ 25 0 4 1.00 4 4 0 0 0
.......................................................................................................................................................................AAGGCAAATAAAAGAACAACCCCGA........................................................... 25 0 5 1.00 5 5 0 0 0
.......................................................................................................................................................................AAGGCAAATAAAAGAACAACCCCG............................................................ 24 0 5 1.00 5 5 0 0 0
...................................................................................................................................................................................................CGACAGCATCGGCATCGGCGGC.................................. 22 0 4 1.00 4 3 0 0 1
..................................................................................................................................................................................................TCGACAGCATCGGCATCGGCGG................................... 22 0 5 0.80 4 3 1 0 0
..........................................................................................................................................................................................................................TCATTGTCACCGCGGTCGTCGCCG......... 24 0 5 0.80 4 1 0 3 0
...................................................................................................................................................................................................CGACAGCATCGGCATCGGCGGCGT................................ 24 0 4 0.75 3 3 0 0 0
..........................................................................................................................................................................................................................TCATTGTCACCGCGGTCGTCGC........... 22 0 5 0.60 3 0 0 3 0
..........................................................AGTGAGAGTAGAGAAAGGA.............................................................................................................................................................................. 19 1 4 0.50 2 0 2 0 0
..................................................................................................................................................................................................TCGACAGCATCGGCATCGGCGGC.................................. 23 0 4 0.50 2 1 0 0 1
..........................................................................................................................TCCGCGCGTCAGCAGCACCAACAGCAA...................................................................................................... 27 0 4 0.50 2 2 0 0 0
.......................................................................................................................................................................AAGGCAAATAAAAGAACAACC............................................................... 21 0 5 0.40 2 1 0 1 0
...................................................................................................................................................................................................CGACAGCATCGGCATCGGC..................................... 19 0 5 0.40 2 0 0 2 0
.......................................................................................................................................................................AAGGCAAATAAAAGAACAAC................................................................ 20 0 5 0.40 2 2 0 0 0
................................................................................................................................................................................................................................TCACCGCGGTCGTCGCCGC........ 19 0 5 0.40 2 0 0 2 0
................................................................................................................................................................................................................................TCACCGCGGTCGTCGCCG......... 18 0 5 0.40 2 0 0 2 0
.......................................................................................................................................................................AAGGCAAATAAAAGAACAACCCCGACA......................................................... 27 0 5 0.40 2 2 0 0 0
.................................................................GTAGAGAAAGGGGAGGAGG....................................................................................................................................................................... 19 0 3 0.33 1 1 0 0 0
...........................................................GTGAGAGTAGAGAAAGGGGAGAA......................................................................................................................................................................... 23 1 3 0.33 1 1 0 0 0
..........................................................AGTGAGAGTAGAGAGAGGGGAG........................................................................................................................................................................... 22 1 3 0.33 1 0 1 0 0
............................................................TGAGAGTAGAGAAAGGGGAGGA......................................................................................................................................................................... 22 0 3 0.33 1 1 0 0 0
..........................................................AGTGAGAGTAGAAAAAGGGGAGG.......................................................................................................................................................................... 23 1 3 0.33 1 1 0 0 0
..................................................................TAGAGAAAGGGGAGGAGGAA..................................................................................................................................................................... 20 1 3 0.33 1 1 0 0 0
..........................................................AGTGAGAGTAGAGAAAGGGGAGT.......................................................................................................................................................................... 23 1 3 0.33 1 1 0 0 0
..................................................................................................................................TCAGCAGCACCAACAGCAATCTCAATC.............................................................................................. 27 0 4 0.25 1 1 0 0 0
..................................................................................................................................................................................................TCGACAGCATCGGCATCGGCGGCGT................................ 25 0 4 0.25 1 1 0 0 0
....................................................................................................................................................................................................GACAGCATCGGCATCGGCGGC.................................. 21 0 4 0.25 1 1 0 0 0
.....................................................................................................................................................................................................ACAGCATCGGCATCGGCGGC.................................. 20 0 4 0.25 1 0 0 0 1
..............................................................................................................................CGCGTCAGCAGCACCAACAGCAATC.................................................................................................... 25 0 4 0.25 1 1 0 0 0
..........................................................AGTGAGAGTAGAGAAAGGGG............................................................................................................................................................................. 20 0 4 0.25 1 0 1 0 0
..........................................................................................................................TCCGCGCGTCAGCAGCACCCACAG......................................................................................................... 24 1 4 0.25 1 0 0 0 1
..................................................................................................................................................................................................TCAACAGCATCGGCATCGGCGGCG................................. 24 1 4 0.25 1 1 0 0 0
..........................................................................................................................TCCGCGCGTCAGCAGCACCAACAGCAAT..................................................................................................... 28 0 4 0.25 1 1 0 0 0
................................................GAGGAGAGAGAGTGAGAGTT....................................................................................................................................................................................... 20 1 4 0.25 1 0 1 0 0
....TCGCCACCACCAACCGCAGCCA................................................................................................................................................................................................................................. 22 1 4 0.25 1 1 0 0 0
....TCGCCACCACCAACCGCAGCCCGTCTA............................................................................................................................................................................................................................ 27 0 4 0.25 1 1 0 0 0
..........................................................................................................................TCCGCGCGTCATCAGCACCAACAG......................................................................................................... 24 1 4 0.25 1 1 0 0 0
..........................................................................................................................TCCGCGCGTCAGCAGCACCAACAGCA....................................................................................................... 26 0 4 0.25 1 1 0 0 0
.......................................................................................................................................................................AAGGCAAATAAAAGAACAACCCCGACAT........................................................ 28 0 5 0.20 1 1 0 0 0
.............................TACGCTTCGGGTGCGGGGAGAGGA...................................................................................................................................................................................................... 24 0 5 0.20 1 1 0 0 0
..............................................................................................................................................................................................................................TGTCACCGCGGTCGTCGCCGCCGCCG... 26 0 5 0.20 1 1 0 0 0
...............................................................................................AAGAACCAAAACTTCAACATGAA..................................................................................................................................... 23 0 5 0.20 1 1 0 0 0
.................................................................................................................................................................................................................................CACCGCGGTCATCGCCGC........ 18 1 5 0.20 1 0 0 1 0
......................................................................................GAGAAGAAGAAGAACCAAAACTTCAAC.......................................................................................................................................... 27 0 5 0.20 1 1 0 0 0
..............................................................................................GAAGAACCAAAACTTCAACATG....................................................................................................................................... 22 0 5 0.20 1 1 0 0 0
.......................................................................................................................................................................AAGGCAAACAAAAGAACAACC............................................................... 21 1 5 0.20 1 1 0 0 0
..................................................................TAGAGAAAGGGAAGGAGG....................................................................................................................................................................... 18 1 5 0.20 1 0 1 0 0
.................................CTTCGGGTGCGGGGAGAGGA...................................................................................................................................................................................................... 20 0 5 0.20 1 1 0 0 0
........................................................................................................................................................................AGGCAAATAAAAGAACAACCC.............................................................. 21 0 5 0.20 1 1 0 0 0
...............................................................................................................ACATGAAGAAATCCGCGCGTCAG..................................................................................................................... 23 0 5 0.20 1 1 0 0 0
.....................................................................................................................................................................................................ACAGCATCGGCATCGGCGG................................... 19 0 5 0.20 1 1 0 0 0
...............................................................................................AAGAACCAAAACTTCAACATGAAGT................................................................................................................................... 25 1 5 0.20 1 0 0 0 1
................................................................................................................................................................................................................................TCACCGCGGTCGTCGCCGCCG...... 21 0 5 0.20 1 1 0 0 0
............................................................................................................................................................................................CCGACATCGACAGCATCGGCATC........................................ 23 0 5 0.20 1 1 0 0 0
................................................................................................................................................................................................CATCGACAGCATCGGCATCGG...................................... 21 0 5 0.20 1 1 0 0 0
..........................................................................................................................................................................................................................TCATTGTCACCGCGGTCGTC............. 20 0 5 0.20 1 0 0 1 0
................................................................................................................................................................................................................................TCACCGCGGTCGTCGCCGCC....... 20 0 5 0.20 1 0 0 1 0
.................................................................................................................................................................................................................................CACCGCGGTCGTCGCCGC........ 18 0 5 0.20 1 0 0 1 0
.................................................................................................................................................................................................ATCGACAGCATCGGCATCGGC..................................... 21 0 5 0.20 1 0 0 1 0
..............................................GAGAGGAGAGAGAGTGAG........................................................................................................................................................................................... 18 0 5 0.20 1 1 0 0 0
.......................................................................................................................................................................................CAACCCCGACATCGACAGCATCGGCA.......................................... 26 0 5 0.20 1 1 0 0 0
...........................TCTACGCTTCGGGTGCGGGGAGA......................................................................................................................................................................................................... 23 0 5 0.20 1 1 0 0 0
.......................................................................................................................................................................AAGGCAAAGAAAAGAACAACCCCG............................................................ 24 1 5 0.20 1 1 0 0 0
.........................................................................................................................................................................................................................CTCATTGTCACCGCGGTCGTCGCCG......... 25 1 5 0.20 1 0 0 0 1
................................................................................................................................................................................................CATCGACAGCATCGGCATCG....................................... 20 0 5 0.20 1 1 0 0 0
.............................TACGCTTCGGGTGCGGGG............................................................................................................................................................................................................ 18 0 5 0.20 1 1 0 0 0
...............................................................................................AAGAACCAAAACTTCAACATGAAG.................................................................................................................................... 24 0 5 0.20 1 1 0 0 0
.......................................................................................................................................................................AAGGCAAATAAAAGAACAACCCCGAC.......................................................... 26 0 5 0.20 1 1 0 0 0
...............................................AGAGGAGAGAGAGTGAGAA......................................................................................................................................................................................... 19 1 5 0.20 1 0 1 0 0
..............................ACGCTTCGGGTGCGGGGAGA......................................................................................................................................................................................................... 20 0 5 0.20 1 1 0 0 0
........................................................................................................................................................................AGGCAAATAAAAGAACAACCCCGA........................................................... 24 0 5 0.20 1 1 0 0 0
.......................................................................................................................................................................AAGGCAAATGAAAGAACAAC................................................................ 20 1 6 0.17 1 0 0 1 0

Anti-sense strand reads

CAGTAGCGGTGGTGGTTGGCGTCGGGCAGATGCGAAGCCCACGCCCCTCTCCTCTCTCTCACTCTCATCTCTTTCCCCTCCTCCTCCTCTTCTTCTTCTTGGTTTTGAAGTTGTACTTCTTTAGGCGCGCAGTCGTCGTGGTTGTCGTTAGAGTTAGAGTTAACTCTTTCCGTTTATTTTCTTGTTGGGGCTGTAGCTGTCGTAGCCGTAGCCGCCGCAGTAACAGTGGCGCCAGCAGCGGCGGCGGCAAG
*************************************************************................((((.(((............((((........))))............)))((((....)).)).......((..(((((((....)))))))...))..............))))********************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V042
embryo
 V111
male body
..........................................................................................................................................................TAGAGTTAACTCTTTCCGTTTAT.......................................................................... 23 0 3 19.00 57 51 4 2 0
...............................................................................CCTCCTCCTCTTCTTCTTCTTGGTT................................................................................................................................................... 25 0 3 15.33 46 46 0 0 0
................................................................................CTCCTCCTCTTCTTCTTCTTGGTT................................................................................................................................................... 24 0 5 13.00 65 64 0 1 0
..................................................................................CCTCCTCTTCTTCTTCTTGGTT................................................................................................................................................... 22 0 5 8.20 41 41 0 0 0
...................................................................................CTCCTCTTCTTCTTCTTGGTT................................................................................................................................................... 21 0 5 7.60 38 37 0 1 0
............................................................................................................................................................GAGTTAACTCTTTCCGTTTAT.......................................................................... 21 0 3 7.00 21 14 0 7 0
............................................CCCTCTCCTCTCTCTCACTCTCAT....................................................................................................................................................................................... 24 0 4 7.00 28 27 0 1 0
.................................................................................TCCTCCTCTTCTTCTTCTTGGTT................................................................................................................................................... 23 0 5 6.60 33 26 3 4 0
.............................................CCTCTCCTCTCTCTCACTCTCAT....................................................................................................................................................................................... 23 0 4 6.50 26 26 0 0 0
...............................................................................................................................................................................................................GTAGCCGCCGCAGTAACAGT........................ 20 0 4 6.00 24 22 0 2 0
...........................................CCCCTCTCCTCTCTCTCACTCTCAT....................................................................................................................................................................................... 25 0 4 5.50 22 22 0 0 0
........................................................................................................................................................GTTAGAGTTAACTCTTTCCGTTTAT.......................................................................... 25 0 3 5.00 15 15 0 0 0
.........................................................................................................................................................TTAGAGTTAACTCTTTCCGTTTAT.......................................................................... 24 0 3 5.00 15 15 0 0 0
..........................................GCCCCTCTCCTCTCTCTCACTCTCAT....................................................................................................................................................................................... 26 0 4 4.25 17 17 0 0 0
....................................................................................TCCTCTTCTTCTTCTTGGTT................................................................................................................................................... 20 0 5 3.80 19 19 0 0 0
...........................................................................................................................................................AGAGTTAACTCTTTCCGTTTAT.......................................................................... 22 0 3 3.67 11 11 0 0 0
.........................................................................................................................................................................................................GTAGCCGTAGCCGCCGCAGTAACAGT........................ 26 0 4 3.50 14 14 0 0 0
....................................................TCTCTCTCACTCTCATCTCTTT................................................................................................................................................................................. 22 0 4 3.25 13 13 0 0 0
.................GGCGTCGGGCAGATGCGAAGCCCAC................................................................................................................................................................................................................. 25 0 5 2.80 14 13 0 1 0
...........................................................................................................................................................................................................AGCCGTAGCCGCCGCAGTAACAGT........................ 24 0 4 2.75 11 11 0 0 0
....................GTCGGGCAGATGCGAAGCCCAC................................................................................................................................................................................................................. 22 0 5 2.60 13 13 0 0 0
............................................................................................................................................................................................GGCTGTAGCTGTCGTAGCCGT.......................................... 21 0 5 2.60 13 11 1 1 0
......................CGGGCAGATGCGAAGCCCACGCCCCT........................................................................................................................................................................................................... 26 0 5 2.60 13 10 1 2 0
...............TTGGCGTCGGGCAGATGCGAAG...................................................................................................................................................................................................................... 22 0 5 2.40 12 1 0 0 11
..................................................CCTCTCTCTCACTCTCATCTCT................................................................................................................................................................................... 22 0 4 2.00 8 5 3 0 0
....................GTCGGGCAGATGCGAAGCCCACGC............................................................................................................................................................................................................... 24 0 5 2.00 10 8 2 0 0
..............GTTGGCGTCGGGCAGATGCGAAG...................................................................................................................................................................................................................... 23 0 5 1.80 9 2 0 0 7
..................GCGTCGGGCAGATGCGAAGCCCAC................................................................................................................................................................................................................. 24 0 5 1.80 9 9 0 0 0
.....................................................CTCTCTCACTCTCATCTCTTTCCCCT............................................................................................................................................................................ 26 0 4 1.75 7 7 0 0 0
..............................................CTCTCCTCTCTCTCACTCTCAT....................................................................................................................................................................................... 22 0 4 1.75 7 7 0 0 0
....................................................TCTCTCTCACTCTCATCTCTT.................................................................................................................................................................................. 21 0 4 1.75 7 7 0 0 0
..........................................................................................................................................................................................GGGGCTGTAGCTGTCGTAGCCGT.......................................... 23 0 5 1.60 8 7 1 0 0
....................................................TCTCTCTCACTCTCATCTCT................................................................................................................................................................................... 20 0 4 1.50 6 6 0 0 0
........................................................................................................................................................................................................CGTAGCCGTAGCCGCCGCAGTAACAGT........................ 27 0 4 1.50 6 5 0 0 1
............................................................................................................................................................................................................GCCGTAGCCGCCGCAGTAACAGT........................ 23 0 4 1.50 6 6 0 0 0
...................................................CTCTCTCTCACTCTCATCTCTTT................................................................................................................................................................................. 23 0 4 1.50 6 5 1 0 0
................................................................................................................................GCAGTCGTCGTGGTTGTCGTT...................................................................................................... 21 0 4 1.50 6 3 3 0 0
..............................................................................................................................................................................................................CGTAGCCGCCGCAGTAACAGT........................ 21 0 4 1.50 6 5 0 1 0
........................GGCAGATGCGAAGCCCACGCCCCTCT......................................................................................................................................................................................................... 26 0 5 1.40 7 6 0 1 0
..............................................................................................CTTCTTGGTTTTGAAGTTGTACTTCTT.................................................................................................................................. 27 0 5 1.40 7 7 0 0 0
...............................................................................CCTCCTCCTCTTCTTCTTCTTGGT.................................................................................................................................................... 24 0 3 1.33 4 4 0 0 0
..........................................................................................................................................................TAGAGTTAACTCTTTCCGTTTA........................................................................... 22 0 3 1.33 4 4 0 0 0
.............................................................................................................................................TTGTCGTTAGAGTTAGAGT........................................................................................... 19 0 3 1.33 4 0 4 0 0
.................................................TCCTCTCTCTCACTCTCATCTCT................................................................................................................................................................................... 23 0 4 1.25 5 1 4 0 0
................................................CTCCTCTCTCTCACTCTCATCTCT................................................................................................................................................................................... 24 0 4 1.25 5 5 0 0 0
...........................................................................................................................GGCGCGCAGTCGTCGTGGTTGTCGT....................................................................................................... 25 0 4 1.25 5 5 0 0 0
...................................................CTCTCTCTCACTCTCATCTCTT.................................................................................................................................................................................. 22 0 4 1.25 5 5 0 0 0
..........................................................................................................................................................................................................TAGCCGTAGCCGCCGCAGTAACAGT........................ 25 0 4 1.25 5 2 1 2 0
..........GGTGGTTGGCGTCGGGCAGATGCGAAG...................................................................................................................................................................................................................... 27 0 5 1.20 6 0 0 0 6
.............................................................................................TCTTCTTGGTTTTGAAGTTGTACTTCTT.................................................................................................................................. 28 0 5 1.20 6 5 0 1 0
.............GGTTGGCGTCGGGCAGATGCGAAG...................................................................................................................................................................................................................... 24 0 5 1.20 6 4 0 0 2
.................GGCGTCGGGCAGATGCGAAGCCCA.................................................................................................................................................................................................................. 24 0 5 1.20 6 2 4 0 0
...................CGTCGGGCAGATGCGAAGCCCAC................................................................................................................................................................................................................. 23 0 5 1.20 6 6 0 0 0
.................................................................................TCCTCCTCTTCTTCTTCTTGGTTT.................................................................................................................................................. 24 0 5 1.20 6 4 1 1 0
...........................................................................................................................................................................................GGGCTGTAGCTGTCGTAGCCGT.......................................... 22 0 5 1.20 6 6 0 0 0
.................................................................................................................................CAGTCGTCGTGGTTGTCGTT...................................................................................................... 20 0 4 1.00 4 2 1 1 0
......................CGGGCAGATGCGAAGCCCACGCCCCTCT......................................................................................................................................................................................................... 28 0 5 1.00 5 4 0 1 0
..........................................................................................................................................................TAGAGTTAACTCTTGCCGTTTAT.......................................................................... 23 1 3 1.00 3 3 0 0 0
..........................................................................................................................................................TAGAGTTAACTCTTTCCGTTT............................................................................ 21 0 3 1.00 3 3 0 0 0
...................................................CTCTCTCTCACTCTCATCTCT................................................................................................................................................................................... 21 0 4 1.00 4 3 1 0 0
...................................................................................CTCCTCTTCTTCTTCTTGGTTT.................................................................................................................................................. 22 0 5 1.00 5 5 0 0 0
.................GGCGTCGGGCAGATGCGAAGCCCACG................................................................................................................................................................................................................ 26 0 5 1.00 5 5 0 0 0
...............................................................................................TTCTTGGTTTTGAAGTTGTACTTCTT.................................................................................................................................. 26 0 5 1.00 5 5 0 0 0
..................................................CCTCTCTCTCACTCTCATCTCTTT................................................................................................................................................................................. 24 0 4 1.00 4 3 1 0 0
.......................................................................................................................................................AGTTAGAGTTAACTCTTTCCGTTTAT.......................................................................... 26 0 3 1.00 3 3 0 0 0
.........................................................................................................................................................................................................GTAGCCGTAGCCGCCGCAGT.............................. 20 0 4 1.00 4 4 0 0 0
.................................................TCCTCTCTCTCACTCTCATCT..................................................................................................................................................................................... 21 0 4 1.00 4 1 3 0 0
..................................................CCTCTCTCTCACTCTCATCTCTT.................................................................................................................................................................................. 23 0 4 1.00 4 4 0 0 0
..................GCGTCGGGCAGATGCGAAG...................................................................................................................................................................................................................... 19 0 5 1.00 5 0 0 0 5
................................................................................................................................GCAGTCGTCGTGGTTGTCGT....................................................................................................... 20 0 4 1.00 4 3 1 0 0
.............................................................................................................................................................................................GCTGTAGCTGTCGTAGCCGT.......................................... 20 0 5 1.00 5 5 0 0 0
...............................................................................................................TGTACTTCTTTAGGCGCGCAGTCGT................................................................................................................... 25 0 5 0.80 4 4 0 0 0
..............................................................................................CTTCTTGGTTTTGAAGTTGTACTTCT................................................................................................................................... 26 0 5 0.80 4 4 0 0 0
..........................................................................................................................................................................................TGGGCTGTAGCTGTCGTAGCCGT.......................................... 23 1 5 0.80 4 1 3 0 0
............TGGTTGGCGTCGGGCAGATGCGAAG...................................................................................................................................................................................................................... 25 0 5 0.80 4 2 0 0 2
...................................................................................................................CTTCTTTAGGCGCGCAGTCGTCGT................................................................................................................ 24 0 5 0.80 4 4 0 0 0
...........GTGGTTGGCGTCGGGCAGATGCGAAG...................................................................................................................................................................................................................... 26 0 5 0.80 4 2 0 0 2
................TGGCGTCGGGCAGATGCGAAGCCCAC................................................................................................................................................................................................................. 26 0 5 0.80 4 4 0 0 0
..........................................................................................................................................................................................GGGGCTGTAGCTGTCGTAGCCGTAG........................................ 25 0 5 0.80 4 3 0 0 1
................................................................................CTCCTCCTCTTCTTCTTCTTGGT.................................................................................................................................................... 23 0 5 0.80 4 4 0 0 0
................................................................................CTCCTCCTCTTCTTCTTCTTGGTTT.................................................................................................................................................. 25 0 5 0.80 4 4 0 0 0
.................................................TCCTCTCTCTCACTCTCATCTCTT.................................................................................................................................................................................. 24 0 4 0.75 3 3 0 0 0
.....................................................CTCTCTCACTCTCATCTCTT.................................................................................................................................................................................. 20 0 4 0.75 3 3 0 0 0
........................................................TCTCACTCTCATCTCTTTCCCCT............................................................................................................................................................................ 23 0 4 0.75 3 3 0 0 0
.........................................................................................................................................................................................................ATAGCCGTAGCCGCCGCAGTAACAGT........................ 26 1 4 0.75 3 3 0 0 0
..........................................GCCCCTCTCCTCTCTCTCACTCTCA........................................................................................................................................................................................ 25 0 4 0.75 3 3 0 0 0
...............................................TCTCCTCTCTCTCACTCTCAT....................................................................................................................................................................................... 21 0 4 0.75 3 3 0 0 0
................................................................................................................................................................................................................TAGCCGCCGCAGTAACAGT........................ 19 0 4 0.75 3 3 0 0 0
......................................................................................................................................ATCGTGGTTGTCGTTAGAGT................................................................................................. 20 1 4 0.75 3 1 2 0 0
...............................................................................CCTCCTCCTCTTCTTCTTCTTGGTTC.................................................................................................................................................. 26 1 3 0.67 2 2 0 0 0
...............................................................................CCTCCTCCTCTTCTTCTTCTTGGTTT.................................................................................................................................................. 26 0 3 0.67 2 2 0 0 0
...............................................................................CCTCCTCCTCTTCTTCGTCTTGGTT................................................................................................................................................... 25 1 3 0.67 2 2 0 0 0
.........................................................................................................................................................TTAGAGTTAACTCTTTCCGTTTA........................................................................... 23 0 3 0.67 2 2 0 0 0
......................................................................................................................................GTCGTGGTTGTCGTTAGAGTTAGAGT........................................................................................... 26 0 3 0.67 2 0 2 0 0
....................................................TCTCTCTCACTCTGATCTCTTT................................................................................................................................................................................. 22 1 5 0.60 3 3 0 0 0
....................GTCGGGCAGATGCGAAGCCCACG................................................................................................................................................................................................................ 23 0 5 0.60 3 2 1 0 0
.............................................................................................TCTTCTTGGTTTTGAAGTTGTACTTCT................................................................................................................................... 27 0 5 0.60 3 3 0 0 0
...................................................................................TTCCTCTTCTTCTTCTTGGTT................................................................................................................................................... 21 1 5 0.60 3 3 0 0 0
........................GGCAGATGCGAAGCCCACGCCCCT........................................................................................................................................................................................................... 24 0 5 0.60 3 3 0 0 0
......................CGGGCAGATGCGAAGCCCACGCCCC............................................................................................................................................................................................................ 25 0 5 0.60 3 3 0 0 0
.........................GCAGATGCGAAGCCCACGCCCCTCT......................................................................................................................................................................................................... 25 0 5 0.60 3 3 0 0 0
....................GTCGGGCAGATGCGAAGCCCA.................................................................................................................................................................................................................. 21 0 5 0.60 3 3 0 0 0
.................................................................................................CTTGGTTTTGAAGTTGTACTTCTT.................................................................................................................................. 24 0 5 0.60 3 3 0 0 0
........................GGCAGATGCGAAGCCCACGC............................................................................................................................................................................................................... 20 0 5 0.60 3 3 0 0 0
......................CGGGCAGATGCGAAGCCCACGC............................................................................................................................................................................................................... 22 0 5 0.60 3 1 2 0 0
................................................................................................................GTACTTCTTTAGGCGCGCAGTCGT................................................................................................................... 24 0 5 0.60 3 2 0 1 0
.....................TCGGGCAGATGCGAAGCCCAC................................................................................................................................................................................................................. 21 0 5 0.60 3 3 0 0 0
....................................................................................TCCTCTTCTTCTTCTTGGTTT.................................................................................................................................................. 21 0 5 0.60 3 3 0 0 0
....................................................TCTCTCTCACTCTCATCTCTTTCCCCT............................................................................................................................................................................ 27 0 4 0.50 2 2 0 0 0
.......................................................................................................................................TCGTGGTTGTCGTTAGAGT................................................................................................. 19 0 4 0.50 2 2 0 0 0
....................................................TCTCTCTCACTCTCATCTC.................................................................................................................................................................................... 19 0 4 0.50 2 2 0 0 0
...........................................................................................................................TGCGCGCAGTCGTCGTGGTTGTCGTT...................................................................................................... 26 1 4 0.50 2 0 0 0 2
.......................................................................................................................................TCGTGGTTGTCGTTAGAGTT................................................................................................ 20 0 4 0.50 2 0 2 0 0
......................................................................................................................................GTCGTGGTTGTCGTTAGAGT................................................................................................. 20 0 4 0.50 2 1 0 1 0
..............................................CTCTCCTCTCTCTCACTCTCA........................................................................................................................................................................................ 21 0 4 0.50 2 2 0 0 0
.....................................................CTCTCTCACTCTCATCTCTTT................................................................................................................................................................................. 21 0 4 0.50 2 2 0 0 0
.......................................................CTCTCACTCTCATCTCTTTCCCCT............................................................................................................................................................................ 24 0 4 0.50 2 2 0 0 0
............................................CCCTCTCCTCTCTCTCACTCTCATCT..................................................................................................................................................................................... 26 0 4 0.50 2 2 0 0 0
......................................................TCTCTCACTCTCATCTCTTTCCCCT............................................................................................................................................................................ 25 0 4 0.50 2 2 0 0 0
...........................................................................................................................................................................................................AGCCGTAGCCGCCGCAGTAACAG......................... 23 0 4 0.50 2 2 0 0 0
................................................CTCCTCTCTCTCACTCTCATCT..................................................................................................................................................................................... 22 0 4 0.50 2 2 0 0 0
.........................................................CTCACTCTCATCTCTTTCCCCT............................................................................................................................................................................ 22 0 4 0.50 2 2 0 0 0
..........................................................TCACTCTCATCTCTTTCCCCT............................................................................................................................................................................ 21 0 4 0.50 2 2 0 0 0
...............................................................................................................................................................................................................GTAGCCGCCGCAGTAACAG......................... 19 0 4 0.50 2 1 0 1 0
...............................................................................................................................CGCAGTCGTCGTGGTTGTCGT....................................................................................................... 21 0 4 0.50 2 2 0 0 0
...........................................................................................................................................................................................................TGCCGTAGCCGCCGCAGTAACAGT........................ 24 1 4 0.50 2 2 0 0 0
.........................GCAGATGCGAAGCCCACGC............................................................................................................................................................................................................... 19 0 5 0.40 2 2 0 0 0
....................GTCTGGCAGATGCGAAGCCCACGCCCCT........................................................................................................................................................................................................... 28 1 5 0.40 2 0 2 0 0
..........GGTGGTTGGCGTCGGGCAGATGCGA........................................................................................................................................................................................................................ 25 0 5 0.40 2 2 0 0 0
.............................................................................................................................................................................TTATTTTCTTGTTGGGGCTGTAGC...................................................... 24 0 5 0.40 2 0 2 0 0
...................CGTCGGGCAGATGCGAAGCCCACGC............................................................................................................................................................................................................... 25 0 5 0.40 2 2 0 0 0
........................................................................................................TTGAAGTTGTACTTCTTTAGGCGCGCAGT...................................................................................................................... 29 0 5 0.40 2 0 2 0 0
.................................................................................................................AACTTCTTTAGGCGCGCAGTCGTCGT................................................................................................................ 26 1 5 0.40 2 2 0 0 0
.................GGCGTCGGGCAGATGCGAAGCC.................................................................................................................................................................................................................... 22 0 5 0.40 2 2 0 0 0
.....................TCGGGCAGATGCGAAGCCCACGC............................................................................................................................................................................................................... 23 0 5 0.40 2 2 0 0 0
..................GCGTCGGGCAGATGCGAAGCCCA.................................................................................................................................................................................................................. 23 0 5 0.40 2 2 0 0 0
..............................................................................................................................................................................................CTGTAGCTGTCGTAGCCGT.......................................... 19 0 5 0.40 2 2 0 0 0
.........................................................................................................................................................................................TGGGGCTGTAGCTGTCGT................................................ 18 0 5 0.40 2 1 0 0 1
..................................................................................CCTCCTCTTCTTCTTCTTGGT.................................................................................................................................................... 21 0 5 0.40 2 2 0 0 0
..............................................................................................CTTCTTGGTTTTGAAGTTGTACTTC.................................................................................................................................... 25 0 5 0.40 2 2 0 0 0
................TGGCGTCGGGCAGATGCGAAGC..................................................................................................................................................................................................................... 22 0 5 0.40 2 1 0 0 1
................................................................................................TCTTGGTTTTGAAGTTGTACTTCTT.................................................................................................................................. 25 0 5 0.40 2 2 0 0 0
........................GGCAGATGCGAAGCCCAC................................................................................................................................................................................................................. 18 0 5 0.40 2 1 1 0 0
............................................................................................................................................................................................TGCTGTAGCTGTCGTAGCCGT.......................................... 21 1 5 0.40 2 2 0 0 0
.................................................................................................................TACTTCTTTAGGCGCGCAGTCGT................................................................................................................... 23 0 5 0.40 2 0 2 0 0
........................GGCAGATGCGAAGCCCACGCCCC............................................................................................................................................................................................................ 23 0 5 0.40 2 2 0 0 0
......................................................................................CTCTTCTTCTTCTTGGTTTTGAAGT............................................................................................................................................ 25 0 5 0.40 2 2 0 0 0
.................................................................................CCCTCCTCTTCTTCTTCTTGGTT................................................................................................................................................... 23 1 5 0.40 2 2 0 0 0
...........................................................................................................................GGCGCGCAGTCGTCGTGGTT............................................................................................................ 20 0 5 0.40 2 1 0 1 0
..................................................................................CCTCCTCTTCTTCGTCTTGGTT................................................................................................................................................... 22 1 5 0.40 2 2 0 0 0
.......................................................................................................................................................................................GTTGGGGCTGTAGCTGTCGT................................................ 20 0 5 0.40 2 2 0 0 0
.........................................................................................................................AAGGCGCGCAGTCGTCGTGGT............................................................................................................. 21 1 5 0.40 2 2 0 0 0
............................................................................................................TGTTGTACTTCTTTAGGCGC........................................................................................................................... 20 1 5 0.40 2 0 2 0 0
......................CGGGCAGATGCGAAGCCCACGCCC............................................................................................................................................................................................................. 24 0 5 0.40 2 2 0 0 0
........................................................................................................................................................................................................................GCAGTAACAGTGGCGCCAGC............... 20 0 5 0.40 2 2 0 0 0
...............................................................................................................................................GTCGTTAGAGTTAGAGTTAAC....................................................................................... 21 0 3 0.33 1 1 0 0 0
.........................................................................................................................................................TTAGAGTTAACTCTTTCCGTTTATC......................................................................... 25 1 3 0.33 1 1 0 0 0
.....................................................................................................................................................AGAGTTAGAGTTAACTCTTTCCGTTTAT.......................................................................... 28 0 3 0.33 1 1 0 0 0
........................................................................................................................................................GTTAGAGTTAACTCTTTCCGTTTA........................................................................... 24 0 3 0.33 1 1 0 0 0
............................................................................................................................................................GAGTTAACTCTTTCCGTTTATTT........................................................................ 23 0 3 0.33 1 1 0 0 0
.............................................................CTCTCATCTCTTTCCCCTCCTCCT...................................................................................................................................................................... 24 0 3 0.33 1 1 0 0 0
.........................................................................................................................................GTGGTTGTCGTTAGAGTTAGAGT........................................................................................... 23 0 3 0.33 1 1 0 0 0
..........................................................................................................................................................TAGAGTTAACTCATTCCGTTTAT.......................................................................... 23 1 3 0.33 1 1 0 0 0
...........................................................................................................................................................AGAGTTAACTCTTTCCGTTTA........................................................................... 21 0 3 0.33 1 1 0 0 0
.........................................................................................................................................................TTAGAGTTAACTCTTGCCGTTTAT.......................................................................... 24 1 3 0.33 1 1 0 0 0
......................................................................................................................................................GAGTTAGAGTTAACTCTTTCCGTTTAT.......................................................................... 27 0 3 0.33 1 1 0 0 0
.........................................................................................................................................................TTAGAGTTAACTCTTTCCGTTTAA.......................................................................... 24 1 3 0.33 1 1 0 0 0
...............................................................................CCTCCTCCTCTTCTTCCTCTTGGTT................................................................................................................................................... 25 1 3 0.33 1 1 0 0 0
..............................................................................................................................................................GTTAACTCTTTCCGTTTATTTT....................................................................... 22 0 3 0.33 1 1 0 0 0
.........................................................................................................................................................ATAGAGTTAACTCTTTCCGTTTAT.......................................................................... 24 1 3 0.33 1 1 0 0 0
..........................................................................................................................................................TAGAGTTAACTCTTCCCGTTTAT.......................................................................... 23 1 3 0.33 1 1 0 0 0
.............................................................................................................................................................AGTTAACTCTTGCCGTTTAT.......................................................................... 20 1 3 0.33 1 1 0 0 0
...............................................................................CCTCCTCCTCTTATTCTTCTTGGTT................................................................................................................................................... 25 1 3 0.33 1 1 0 0 0
........................................................................................................................................................GTTAGAGTTAACTCTTTCCGTTT............................................................................ 23 0 3 0.33 1 1 0 0 0
...........................................................................................................................................GGTTGTCGTTAGAGTTAGAGTTAACT...................................................................................... 26 0 3 0.33 1 1 0 0 0
...............................................................................CCTCCTCCTCTTCTTCATCTTGGTT................................................................................................................................................... 25 1 3 0.33 1 1 0 0 0
..........................................................................................................................................................AAGAGTTAACTCTTTCCGTTTATC......................................................................... 24 2 3 0.33 1 1 0 0 0
..........................................................................................................................................................TAGAGTTAACTCTGTCCGTTTA........................................................................... 22 1 3 0.33 1 1 0 0 0
............................................................................................................................................GTTGTCGTTAGAGTTAGAGT........................................................................................... 20 0 3 0.33 1 1 0 0 0
...........................................................CACTCTCATCTCTTTCCCCTCCTCCT...................................................................................................................................................................... 26 0 3 0.33 1 1 0 0 0
............................................................ACTCTCATCTCTTTCCCCTCCT......................................................................................................................................................................... 22 0 3 0.33 1 1 0 0 0
............................................................................................................................................................GAGTTAACTCTTTCCGTTTA........................................................................... 20 0 3 0.33 1 1 0 0 0
..........................................................................................................................................TGGTTGTCGTTAGAGTTAGAGT........................................................................................... 22 0 3 0.33 1 1 0 0 0
.............................................................................................................................CGCGCAGTCGTCGTGGTTGTCGT....................................................................................................... 23 0 4 0.25 1 1 0 0 0
........................................................................................................................................................................................................CGTAGCCGTAGCCGCCGCGGTAACAGT........................ 27 1 4 0.25 1 1 0 0 0
.......................................................................................................................AAAAGGCGCGCAGTCGTCGTGGTTGTC......................................................................................................... 27 3 4 0.25 1 0 1 0 0
................................................................................................................................................................................................................TTGCCGCCGCAGTAACAGT........................ 19 1 4 0.25 1 1 0 0 0
........................................ACGCCCCTCTCCTCTCTCTCACTCTCAT....................................................................................................................................................................................... 28 0 4 0.25 1 1 0 0 0
...........................................CCCCTCTCCTCTCTCTCACTCTCA........................................................................................................................................................................................ 24 0 4 0.25 1 1 0 0 0
..............................................CTCTCCTCTCTCTCACTCTCATCT..................................................................................................................................................................................... 24 0 4 0.25 1 1 0 0 0
...................................................CTCTCTCTCACTCTAATCTCTTT................................................................................................................................................................................. 23 1 4 0.25 1 1 0 0 0
.........................................TGCCCCTCTCCTCTCTCTCACTCTCATT...................................................................................................................................................................................... 28 2 4 0.25 1 1 0 0 0
..........................................GCCCCTCTCCTCTCTCTCACTCAT......................................................................................................................................................................................... 24 2 4 0.25 1 1 0 0 0
.........................................TGCCCCTCTCCTCTCTCTCACTCTCAT....................................................................................................................................................................................... 27 1 4 0.25 1 1 0 0 0
..........................................GCCCCTCTCCTCTCTCTGACTCTCAT....................................................................................................................................................................................... 26 1 4 0.25 1 1 0 0 0
......................................................TCTCTCACTCTCATCTCTTT................................................................................................................................................................................. 20 0 4 0.25 1 1 0 0 0
.............................................TCTCTCCTCTCTCTCACTCTCAT....................................................................................................................................................................................... 23 1 4 0.25 1 1 0 0 0
.....................................................CTCTCTCACTCTCATCTCTTTCCC.............................................................................................................................................................................. 24 0 4 0.25 1 1 0 0 0
................................................CTCCTCTCTCTCACTCTCATCTCTT.................................................................................................................................................................................. 25 0 4 0.25 1 1 0 0 0
.............................................CCTCTCCTCTCTCTCACTCTCATA...................................................................................................................................................................................... 24 1 4 0.25 1 1 0 0 0
............................................................................................................................................................................................................GCCGTAGCCGCCGCCGTAACAGT........................ 23 1 4 0.25 1 1 0 0 0
...................................................ATCTCTCTCACTCTCATCTCT................................................................................................................................................................................... 21 1 4 0.25 1 1 0 0 0
............................................CCCTCTCCTCTCTCTCACTCTCATCTCT................................................................................................................................................................................... 28 0 4 0.25 1 1 0 0 0
..........................................TCCCCTCTCCTCTCTCTCACTCTCAT....................................................................................................................................................................................... 26 1 4 0.25 1 1 0 0 0
...............................................................................................................................................................................................................ATAGCCGCCGCAGTAACAGT........................ 20 1 4 0.25 1 1 0 0 0
.....................................................CTCTCTCACTCTCATCTCTTTC................................................................................................................................................................................ 22 0 4 0.25 1 1 0 0 0
.............................................CCTCTCCTCTCTCTCACTCTCATC...................................................................................................................................................................................... 24 0 4 0.25 1 1 0 0 0
......................................................TCTCTCACTCTCATGTCTTTCCC.............................................................................................................................................................................. 23 1 4 0.25 1 1 0 0 0
............................................CCGTCTCCTCTCTCTGACTCTCAT....................................................................................................................................................................................... 24 2 4 0.25 1 1 0 0 0
................................................................................................................................................................................................................TAGCCGCCGCAGTAACAG......................... 18 0 4 0.25 1 1 0 0 0
...........................................................................................................................ATCGCGCAGTCGTCGTGGTTGT.......................................................................................................... 22 2 4 0.25 1 1 0 0 0
....................................................TCTCTCTCACTCACATCTCTT.................................................................................................................................................................................. 21 1 4 0.25 1 1 0 0 0
.............................................CCTCTCCTCTCTCTCACTCTC......................................................................................................................................................................................... 21 0 4 0.25 1 1 0 0 0
..................................................................................................................................AGTCGTCGTGGTTGTCGTTAGAGT................................................................................................. 24 0 4 0.25 1 1 0 0 0
..............................................ATCTCCTCTCTCTCACTCTCAT....................................................................................................................................................................................... 22 1 4 0.25 1 1 0 0 0
........................................................TCTCACTCTCATGTCTTTCCC.............................................................................................................................................................................. 21 1 4 0.25 1 1 0 0 0
........................................................TCTCACTCTCATCTCTTCCCCCT............................................................................................................................................................................ 23 1 4 0.25 1 1 0 0 0
........................................................................................................................................................................................................CGTAGCCGTAGCCGCCGCAGT.............................. 21 0 4 0.25 1 1 0 0 0
...............................................................................................................................................................................................................GTAGCCGCCGCAGTAACAGTG....................... 21 0 4 0.25 1 1 0 0 0
.........................................................................................................................................................................................................GTAGCCGTAGCTGCCGCAGT.............................. 20 1 4 0.25 1 1 0 0 0
................................................CTCCTCTCTCTCACTCTCAT....................................................................................................................................................................................... 20 0 4 0.25 1 0 0 1 0
.....................................................CTCTCTCACTCTCATCTCTTTCCCC............................................................................................................................................................................. 25 0 4 0.25 1 1 0 0 0
.............................................................................................................................................................................................................ACGTAGCCGCCGCAGTAACAGT........................ 22 1 4 0.25 1 1 0 0 0
.........................................................................................................................................................................................................GTAGCCGTAGCCGCCGCTGTAACAGT........................ 26 1 4 0.25 1 1 0 0 0
.....................................................CTCTCTCACTCTTATCTCTTT................................................................................................................................................................................. 21 1 4 0.25 1 1 0 0 0
...............................................TCTCCTCTCTCTGACTCTCAT....................................................................................................................................................................................... 21 1 4 0.25 1 1 0 0 0
..............................................CTCTCCTCTCTCTCACTCT.......................................................................................................................................................................................... 19 0 4 0.25 1 1 0 0 0
.......................................................................................................................................TTGTGGTTGTCGTTAGAGT................................................................................................. 19 1 4 0.25 1 1 0 0 0
..........................................GCCCCCCTCCTCTCTCTCACTCTCAT....................................................................................................................................................................................... 26 1 4 0.25 1 1 0 0 0
.............................................................................................................................................................................................................CCGTAGCCGCCGCAGTAAC........................... 19 0 4 0.25 1 1 0 0 0
................................................CTCCTCTCTCTCACTCTCATC...................................................................................................................................................................................... 21 0 4 0.25 1 1 0 0 0
....................................................................................................................................................................................................CTGTCGTAGCCGTAGCCGCCGCAGT.............................. 25 0 4 0.25 1 1 0 0 0
...........................................CCCCTCTCCTCTCTCTAACTCTCAT....................................................................................................................................................................................... 25 1 4 0.25 1 1 0 0 0
............................................CCCTCTCCTCTCTCTCACTCTCATC...................................................................................................................................................................................... 25 0 4 0.25 1 0 0 1 0
.......................................CACGCCCCTCTCCTCTCTCTCACTCTCAT....................................................................................................................................................................................... 29 0 4 0.25 1 1 0 0 0
..................................................GCTCTCTCTCACTCTCATCTCTTT................................................................................................................................................................................. 24 1 4 0.25 1 1 0 0 0
......................................................................................................................................................................................................GTCGTAGCCGTAGCCGCCGCAGT.............................. 23 0 4 0.25 1 0 0 1 0
.....................................................................................................................................................................................................TGTCGTAGCCGTAGCCGCCGCAGT.............................. 24 0 4 0.25 1 1 0 0 0
........................................................................................................................................TGTGGTTGTCGTTAGAGTT................................................................................................ 19 1 4 0.25 1 0 0 1 0
...............................................TCTCCTCTCTCTCACTCTCATCTCT................................................................................................................................................................................... 25 0 4 0.25 1 1 0 0 0
............................................CCCTCTCCTCTCTCTCACTCT.......................................................................................................................................................................................... 21 0 4 0.25 1 1 0 0 0
............................................................................................................................GCGCGCAGTCGTCGTGGTTGTC......................................................................................................... 22 0 4 0.25 1 0 0 1 0
...........................................CCCCTCTCCTCTCTCTCACTCTAAT....................................................................................................................................................................................... 25 1 4 0.25 1 1 0 0 0
...........................................................................................................................................................................................................TTCCGTAGCCGCCGCAGTAACAGT........................ 24 2 4 0.25 1 1 0 0 0
............................................CCCTCTCCTCTCTCTGACTCTCAT....................................................................................................................................................................................... 24 1 4 0.25 1 1 0 0 0
........................................................................................................................................CGTGGTTGTCGTTAGAGTT................................................................................................ 19 0 4 0.25 1 1 0 0 0
...................................................ATCTCTCTCACTCTCATCTCTTT................................................................................................................................................................................. 23 1 4 0.25 1 1 0 0 0
..............................................................................................................................................................................................................CGTAGCCGCCGCGGTAACAGT........................ 21 1 4 0.25 1 1 0 0 0
..............................................CTCTCCTCTCTCTCACTCTC......................................................................................................................................................................................... 20 0 4 0.25 1 1 0 0 0
..............................................................................................................................................................................................................TGTAGCCGCCGCAGTAACAGT........................ 21 1 4 0.25 1 1 0 0 0
...................................................ATCTCTCTCACTCTCATCTCTT.................................................................................................................................................................................. 22 1 4 0.25 1 1 0 0 0
..................................................CCTCTCTCTCACTCTCATCTC.................................................................................................................................................................................... 21 0 4 0.25 1 1 0 0 0
................................................................................................................................GCAGTCGTCGTGGTTGTCGTTAGAGT................................................................................................. 26 0 4 0.25 1 0 1 0 0
......................................................................................................................................GTCGTGGTTGTCGTTAGAGTT................................................................................................ 21 0 4 0.25 1 1 0 0 0
.............................................................................................................................................................................................................ATGTAGCCGCCGCAGTAACAGT........................ 22 2 4 0.25 1 1 0 0 0
................................................................................................................................................................................................................AAGCCGCCGCAGTAACAGT........................ 19 1 4 0.25 1 1 0 0 0
..............................................................................................................................................................................................................CGTAGCCGCCGCAGTAACAG......................... 20 0 4 0.25 1 1 0 0 0
........................................GCGCCCCTCTCCTCTCTCTCACTC........................................................................................................................................................................................... 24 1 4 0.25 1 1 0 0 0
...........................................CCCCTCTCCTCTCTCTGACTCTCAT....................................................................................................................................................................................... 25 1 4 0.25 1 1 0 0 0
.......................................................CTCTCACTCTCATCTCTTTCCCC............................................................................................................................................................................. 23 0 4 0.25 1 1 0 0 0
......................................................TCTCTCACTCTCATCTCTTTCCC.............................................................................................................................................................................. 23 0 4 0.25 1 1 0 0 0
..............................................................................................................................GCGCAGTCGTCGTGATTGTCGTT...................................................................................................... 23 1 4 0.25 1 1 0 0 0
........................................ACGCCCCTCTCCTCTCTCTCACTCT.......................................................................................................................................................................................... 25 0 4 0.25 1 1 0 0 0
.............................................CCTCTCCTCTCTCTCACTCTCA........................................................................................................................................................................................ 22 0 4 0.25 1 1 0 0 0
..............................................................................................................................GCGCAGTCGTCGTGGTTGTCGT....................................................................................................... 22 0 4 0.25 1 1 0 0 0
............................................CCCTCTCCTCTCTCTCACTCTCAA....................................................................................................................................................................................... 24 1 4 0.25 1 1 0 0 0
............................................................................................................................................................................................................GCCGTAGCCGCCGCAGTAACAGTGGC..................... 26 0 4 0.25 1 1 0 0 0
......................................................................................................................................................................................................GTCGTAGCCGTAGCCGCCGCAGTAAC........................... 26 0 4 0.25 1 1 0 0 0
...........................................................................................................................................................................................................AGCCGTAGCCGCCGCAGTAACAGA........................ 24 1 4 0.25 1 1 0 0 0
.....................................................................................................................................................................................................TGTCGTAGCCGTAGCAGCCGCAGT.............................. 24 1 4 0.25 1 1 0 0 0
.........................................CGCCCCTCTCCTCTCTCTCACTCTCA........................................................................................................................................................................................ 26 0 4 0.25 1 1 0 0 0
......................................................ACTCTCACTCTCATCTCTTT................................................................................................................................................................................. 20 1 4 0.25 1 1 0 0 0
......................................................TCTCTCACTCTCATCTCTTTCCCC............................................................................................................................................................................. 24 0 4 0.25 1 1 0 0 0
..........................................................................................................................................................................................................AAGCCGTAGCCGCCGCAGTAACAGT........................ 25 1 4 0.25 1 1 0 0 0
..............................................................................................................................GCGCAGTCGTCGTGGTTGTCGTT...................................................................................................... 23 0 4 0.25 1 1 0 0 0
.................................................TCCTCTCTCTCACTCTCATCTCTTT................................................................................................................................................................................. 25 0 4 0.25 1 1 0 0 0
...............................................TCTCCTCTCTCTCACTCTCATCTCTT.................................................................................................................................................................................. 26 0 4 0.25 1 1 0 0 0
.............................................CCTCTCCTCTCTCTGACTCTCAT....................................................................................................................................................................................... 23 1 4 0.25 1 1 0 0 0
.........................................CGCCCCTCTCCTCTCTCTGACTCTCAT....................................................................................................................................................................................... 27 1 4 0.25 1 1 0 0 0
..................................................................................TCTCCTCTTCTTCTTCTTGGTT................................................................................................................................................... 22 1 5 0.20 1 1 0 0 0
.......................GGGCAGATGCGAAGCCCACGCCCCT........................................................................................................................................................................................................... 25 0 5 0.20 1 1 0 0 0
.............TGTTGGCGTCGGGCAGAT............................................................................................................................................................................................................................ 18 1 5 0.20 1 1 0 0 0
..........................CAGATGCGAAGCCCACGCCCCTCT......................................................................................................................................................................................................... 24 0 5 0.20 1 1 0 0 0
..................................................................................CCTCCTCTTCTTCATCTTGGTT................................................................................................................................................... 22 1 5 0.20 1 1 0 0 0
.............................................................................................................................................................................TTATTTTCTTGTTGGGGCTGTAGCT..................................................... 25 0 5 0.20 1 1 0 0 0
.............................................................................................................................................................................................GCTGTAGCTGTCGTAGCCG........................................... 19 0 5 0.20 1 1 0 0 0
...............................................................................................................CGTACTTCTTTAGGCGCGCAGTCGT................................................................................................................... 25 1 5 0.20 1 0 1 0 0
.........................................................................................................................AAGGCGCGCAGTCGTCGTGGTT............................................................................................................ 22 1 5 0.20 1 1 0 0 0
.........................................................................................................................................................................CCTTTTATTTTCTTGTTGGGGCGGT......................................................... 25 2 5 0.20 1 0 0 1 0
.........................................................................................................TGAAGTTGTACTTCTTTAGGCGCGCAG....................................................................................................................... 27 0 5 0.20 1 1 0 0 0
.........................................................................................................................CAGGCGCGCAGTCGTCGTGGTT............................................................................................................ 22 1 5 0.20 1 0 1 0 0
................TGGCGTCGGGCAGATGCGAAGCCCACCC............................................................................................................................................................................................................... 28 1 5 0.20 1 1 0 0 0
..........TGTGGTTGGCGTCGGGCAGATGCGAAG...................................................................................................................................................................................................................... 27 1 5 0.20 1 0 0 0 1
.....................................................................................................................................................................................CTGTTGGGGCTGTAGCTGT................................................... 19 1 5 0.20 1 0 0 0 1
..........GGTGGTTGGCGTCGGGCAGAT............................................................................................................................................................................................................................ 21 0 5 0.20 1 1 0 0 0
.................................................................................TCGTCCTCTTCTTCTTCTTGGTTT.................................................................................................................................................. 24 1 5 0.20 1 1 0 0 0
.....................................................................................................................................................................................TTGTTGGGGCTGTAGCTGTCGT................................................ 22 0 5 0.20 1 0 0 1 0
................TGGCGTCGGGCAGATGCGAAGCCCA.................................................................................................................................................................................................................. 25 0 5 0.20 1 1 0 0 0
..........................................................................................TCTTCTTCTTGGATTTGAAGT............................................................................................................................................ 21 1 5 0.20 1 1 0 0 0
........................AGCAGATGCGAAGCCCACGCCCCT........................................................................................................................................................................................................... 24 1 5 0.20 1 1 0 0 0
.............GGTTGGCGTCGGGCAAATGCGAAG...................................................................................................................................................................................................................... 24 1 5 0.20 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_647:753-1003 + dpe_1971 GTCA---------------------------------------------------------------------------------TCG--C---------------------------------------------------------CACCAC------CA---ACCGCA----------------------GCCC-G-TCTACGCTTCGGGTGCGGGG--AGAGGAGAGAGAGTG--------------------------------------------------------------------AGAGTAGAGAAAGGGGAGGAGGAGGAGAAGAA-------------GAAGAACCAAAACTTCAACATGAAGAAATCCG----CG------CGTCAGCAGCACC---------------------------------------------------------------AACAGCA-A------TCTCAATCTCAATTGAGAAAGGCAAAT----------------------------------------------------------------------------AAAAGAAC---AACCC---------------------C------------------------------------------------------------GACATCGACAG----------------------------------------------CATC-GGCATC-------GGCGG-----------------------------CG-----------------------------T---------------------CATTGTCACCGC---------------GGTCGTC---------------GC---C--------------------GCCG----------------CC---GTT----------------------------------C-------------------------
dp5 2:17093240-17093446 - TTCA---------------------------------------------------------------------------------CAG--CGGTGGAGG-------------------------------------------------CGGCTG------CG------TCG----------------------GCT--------------------------------------------------------------------------------------------------TCGGCAGCGGC--------------------------------GTCGATGTTGATG----------------------------------------ATCACTTCAAGTACAGAGACACCAGCGG---------------------------------------------CAGCAC------------------------------------------CAGCG---GCC---GCAC---------------------CAATTAATGCCGCATCAACAACA---ACA---------------------ACA------------------------------A------------------------------------------------------------CAGCAG---------------------CCATA-GCTGCAACACAAATAC----AACCAGA---AG-CAACCC-----------------------------ATCAAAC-----------------TG------CAGC---ATCGTCT---------------------------------AC---------------------AG---C--------------------CATAA---------------CTAC--------------------------------------A-------------------------
droWil2 scf2_1100000003789:1693-1909 - GCAA---------------------------------------------------------------------------------CAG--CAGCAGCGA-------------------------------------------------ATGCAA------CA---------------------------------------------------------------------------------------------------GCAACA---------GCAACAGCAG---------CAACA---------------------------------------------------------------------------------------------------------------ATTGCAGCAA---------CAACAACAA---CAGCAGC----------------------------AGCA------A--------------------------CAACAGCAAC---------AGCAACAA------------CAACA---GCAGCAGCAACA---GCAACAACA---GCAGC---AGCAGCA---GCA------------ACTGCAAC---------------------------------------------AACAGCAGCAGCAACAGCAACAA----------------------------------------------CAAC--------------AACAT-----------------------------CAG--------------------------------------------------CAGCAAC---------------------------AGC---------AACAACAGCAG----------CAACAG-CAACAA---------------CA---ACA-----------------------------------------------------------C
droVir3 scaffold_13049:1087950-1088183 - TTTG---------------------------------------------------------------------------------CCG--C-----------CCAGCTGAATGCGACAACAGCTGCCGCGGCGCAGCCTCAACAG---CAGCC------------GCATCT----------------------GCA-----------------------------------------------------GCA---------GCA------------GCAGCAACAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCATC--------------------TGCAGCA---GCA---GCAA---CA---------------T---CTGCA---GCAACAGCAGCT---GCA------ACAGCAGC------AGCA------------------TCT------------------GCAGC---------------------------AACAGCAGTTGCAGCAGCAACAA----------------------------------------------CAAC--------------AACAA-----------------------------CA-----------------------------G---------------------CAGCAGC---------------------------AAC---------AGCAGCCGCCG----------CAGCAGC-AGCAGCAGGAGCTGAAGAAGAA---ACG-----------------------------------------------------------C
droMoj3 scaffold_6328:2527946-2528161 - CAGC------------------------------------------------------------------------------------AGCCG-------------------------------------------------------CCGCCG------CC---GCATAT----------------------GCA-----------------------------------------------------GCA---------GCA------------GCAGCTGCAGCAACACTTCCAGCAGCAGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACACTACCAGCA----GCAGCA-------GCAGCAGCA---GCAGC---AG------CA------------G------------CACTATCA------GCA------GCAGCAGCTGC---ATCAGCACTTCCAGCAGCAGCAGCAGCAACACT---------------------------------------------------------------------------------------------------------------------------------ATCAGCAGCAGCAACACT----GT----------CAG-----------------------CA---G---CAGCAACACTG------------------------------------------------------TCAG---CAG----------CAGCAG-CTGCAG---------------CA---ATA-----------------------------------------------------------C
droGri2 scaffold_15112:5104727-5104950 - TCCT---------------------------------------------------------------------------------CAT--C----------------T-----------------------------------------GGGAG------CG----------------------------------------------GCGGGCGCAGTGGCG---TTAA----CACACGCTCTGGTCAGCAGCAGCAGCAGCAGCAGCATCAGCAG------------------CAGCATCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCATCAAC--------------------AGCAGCA---GCA---TCGG---CA---------------G---CAGCA---GCAGCATCAGCA---GCA------GCAGCAGCAGC---GTCAA---------------------C------------------ATC---------------------------AGCAGCA---------------G------------------CAGCAGCAGCAG----------------CTAA--------------AACAA-----------------------------CAG---C-----------------------AG------------------------CAGC---------------------------AAAAA------CAGCAG---CAGCAGCAGT-----------CAAAA---------------CAAC--------------------------------------A-------------------------
droAna3 scaffold_13266:8754016-8754209 - CAGC------------------------------------------------------------------------------------AATGG-------------------------------------------------------GGGCTC------CGCCGGCGCCA----------------------GCGGCA---------------------------GCAT----CGAGCTCCTC------------------------------------------------------------------------------------------------TGCCCG----------------------------------------CCCAGCGGCAGCAGCAGCATC---------------------------------------------------------------------------------------------------------AGCG---GCA---GTGC------------------------CAGCTTCAGCAGCAGCAGTG---GTGCCAGCAG---CAGC------AACA------------------CCC------------------ACAGCA----------------------------CAGCA--------------------GTCAGTAG----------------------------------TGAG--------------TCCAA-----------------------------CAA--------------------------------------------------CAACAGT---------AGCAGCAGCAGCAGCAGC---------------AG---C--------------------AGCAA---------------CAAC--------------------------------------A-------------------------
droBip1 scf7180000395567:7333-7542 - CAGC------------------------------------------------------------------------------------GGTTG-----------------------------------CC-------------------GGTTC------CG-------------------------------------------------GGCGGAAGC--GGAAGCGCAAGAAGGACACCAG-TGCTGCAGCGGCGGCGGCAGCAGCAGCGGCAGC------------------AGCC-CA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACAGCAGC--------------------TGCAGCA---ACA---GCAC---------------------CAGCAGCAGCAACACCAGCAGCA---ACA---------------------ACA------------------------------G------------------------------------------------------------CAGCAA---------------------CATCA-GCTGCAACAGCACCAG----CAACAGT---TA-CAACAC-----------------------------CAGCAGC-----------------AG------CAGC---AACAGCA---------------------------------AC---------------------AG---C------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302677:1059885-1060095 - TCAG---------------------------------------------------------------------------------CAG--CAA-------------------------------------------------------CAACAG------CA---GCTGCA----------------------GCAGCA-----------------------------------------------------------------------------G------------------CAGCAA---------------------------------------------------------------------------------------------------------------TTGCTGCAGTTGTCCATCCAACAGGCGGCTCA---TC-------------------------------ACCATCAGC--------------------AGGAGCA---GCA---CCGT------------------------CAACAGCAGCAGCAGCAGCA---ACACCA------GCAAC------------------------------------------------------------------------------------------------------AGC-------------------------------------AG----------CAGCAACAACAGC-AGCAG-----------------------------------C--------------------AGCAA---C---AGCACCATCAGCAGCAACAGCATCCAGGCCA---------AG---------------------CG---CCG----------CCGCCG----CAG---------------CAACAG--CC--------------------------------G-------------------------
droFic1 scf7180000453833:618459-618666 - CAGC------------------------------------------------------------------------------------AGCAG-------------------------------------------------------CAGCAT------CA---ACAGCAGCAGCAGAGCATGCATCA----CCA--------------------------------------------------------------------------------------------------TCAGCAGCAGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAACATATGCA----ACAGCA-------GCAGCAACA---ACA---CCAG---CA---------------A---CAGCA---ACAACATCAGCA------------------AC---AGCAACA------------------------------A------------------------------------------------------------CATCAA---------------------CAACA-GCAGCAGCAGCATCAG----CAACAGC---AG-CAACAT-----------------------------CAACAAC-----------------AG------CAGC---AACATCA---------------------------------AC---------------------AG---CAG----------CAGCAG----CAA---------------CAACAT--CCC-------------------------------A-------------------------
droEle1 scf7180000491023:317502-317745 - ACAG---------------------------------------------------------------------------------CAG--CAG-------------------------------------------------------CAGCAG------CA---ACAACA----------------------GCAACAGT--------------------------------------------------------------A------------GC------------------AGCAGCAAC-----------------------------------AACAA---CA----------------------------------------------------------------------------CATCCAATAGT--GCGCA-------------------------------------------G----------CA-------GCAGCAGCA---ACA------CCAACA---------------C---CATCA---GCAGCAGCAGCA------------------GC---AGCAGCA------------------------------GCATCACCAGCAGCAACGAGTTGTCGCCAGTAGCAACCAGCAACAACAATTGCAACAGCAGCAG----------------------------------------------CAGC--------------AGCAG-----------------------------CA-----------------------------G---------------------CAGCAAC---------------------------AGC---------AGCAGCAGCAG----------CAGCAGC-AGCAACAGCAGCATGATAATGG---AC-----------------------------------C-------------------------
droRho1 scf7180000777214:474046-474299 - TACA---------------------------------------------------------------------------------GCT--CGGCGGCAG-------------------------------------------------CGGCAG------CA---------------------------------------------------------------------------------------------------GCA------------GCAGCCGCCG-----------GC--------------------------------------GGCGGGG-----AGCTGAATCACCTGATGAACATGTACCA-TCTGCCCGACGA------------GCAGCGCCACCTGCTGCAC----------------------------------------------------------------TACCAGACTGACTCGCCGG--ACTTGCAGCA---GCA---GCAC---------------------CAGGCGATGCAGCAGCAACAGCA---GCA---------------------GCA------------------------------G------------------------------------------------------------CAGCAC---------------------CAACA-GATCCCGCAG----------CAACACCAGACGA-TGCAG-----------------------------CAG--------------------------CAA---C---AGCACCAC---------------------------------C------------------TGCAG---CACCAGCAATCGC--------TGAGG---------------ACGA--------------------------------------T-------------------------
droBia1 scf7180000302113:1788179-1788401 - CAGC------------------------------------------------------------------------------------AGCAG-------------------------------------------------------CAGCAG------CA---GAGACA----------------------GCAGCAAT--------------------------------------------------------------C------------GC------------------AGCCACAAC-----------------------------------AACAG---CA-------------------------------------------------------------ATTGCAGCAA---------CAACA---------------------------------------------------GGCA----ATTACA-------GCTGCGACA---ACGGCAGC------A---------------ACATGCAAT------------------GCC------ACAGCAGCAGC---AACAA---------------------C------------------ATC---------------------------CTCGGCA---------------G------------------------CAG-----------------------CAGCAACAGCCA-CATCAG-----------------------------CAG---C-----------------------AG---C---AGCAACAC---------------------------------C------------------AACAA---CATCCACAAACAACGACAAC-AACAGCGATAACTTTGCAATGG---ACGCC--------------------------------A-------------------------
droTak1 scf7180000415185:302574-302799 - TAGG---------------------------------------------------------------------------------TGG--TGGTGGTGGTGCCCACGTTATTATAACA------------------------------------------------CCGCCGCCGAGGGACGAACTTCACCAG---------------------------------------------------------CA---------GCA------------GCAGTTGC---------------------------------------------------------------------------------------------------------------------AGCATC---------------------------------------------------------------ACCACCA-GCA--------------------------GCAGCAACA---GCA---GCAG---CA---------------G---CTGCAGCAGCAGCAGCTGCA---GC---------------------AGCA------------------------------G------------------------------------------------------------CATCCTCACCACCAGCCAGCGCACCACCTGCCG----------------CTGC--------------AACAA-----------------------------CAG---C-----------------------AG------------------------------------------------C---AGCAACAGTCGCACCACCCA---CTCCCGCACG-----------CACCT---------------CACC--------------------------------------A-------------------------
droEug1 scf7180000409607:19666-19878 - GAC-------------------------------------------------------------------------------------AGCGG-------------------------------------------------------CAGCGA------CGACAGCGGCA----------------------GCGACG-----------------------------------------------------------------------------------------------ACAGCGGCGGC--------------------------------GACGACAGC----------------------------------------GGCAGCGACAGCAGCGGCGGC---------------------------------------------------------------------------------------------------------GACA---GCA---GCGG------------------------CGGCGACAGCAGCGGCAGCG---ATA---------------------ACA---GCG------------GCAGCGACGAC------------------------------------------------------GGCGGCAGCGAC---GA------------------C---------------------------------------GGCGG-----------------------------CG-----------------------------A---------------------CAACGACGACGGCAGCA---------GC---------------------GG---CGA----------CGACGG----CAG---------------CGACAG--CC--------------------------------AGAACACATACAAAATCATACGAAAT
dm3 chr3R:14248373-14248629 - CCCAC--------------------------------------------------GGCCAGCCAATTGGCGGTGGCCTCCCAAGC---GGCGA-------------------------------------------------------TGGCAG------CG---------------------------------------------------------------------------------------------------GCA------------GCCGCGGCGG---------CCTTC-----AATGCAGCGC--------------------------------------------------------------------------------------------------------AA---------CAGCAGCAA---CAGCAGC----------------------------AGCA------G--------------------------CAGCAGCAAC---------AACATCAA------------CACCA---GCAGCAGCAGCA---GCATCAGCAG---TCGC---AACAGCA---GCA------------GCAGCAACAGCAG------------------------------------------------------------CAGT---------------------------------------------------------------------CGCAACAACAACTCCA--TGCCCTTGCGCAG---CAGCACATGCTGCAATTG--CAGCCG---C---AACACCAC---------------------------------C---------------------AG---CAG----------CAGCAG----CA----------------CA---ATG-----------------------------------------------------------C
droSim2 3l:13688952-13689181 - CAAC------------------------------------------------------------------------------------AGAGG-------------------------------------------------------ATGCAA------AT-------------------------------GCA-----------------------------------------------------GCA---------GCA------------GCCGCAACAG-----------AT--------------------------------------TGTTGTA-----A----------------------------------------AC--------------------------------------CAGCAAATACTCAG---TGATCCTCAGCGATTGCAGTACCTACAACA-ACA------G----------CA-------GTTAATGCA---AAA------ACA------------------G---CAACAGCAGCAGCAACAACA---AC------------------AGCAGCA------------------------------G------------------------------------------------------------CAG--------------------------------------------------CAACAACAGCTAG-TGG---GACCACAACAACAGCA--AATCCTTATACAA---C-----------------------AGCAGC---------------------------------------------------AAACA------CCCCAA---CAACAGCAGA-----------TACTG---------------CAGC--------------------------------------A-------------------------
droSec2 scaffold_4:1117001-1117244 - CGCACATGGTGGAGGAGATTGGCTGCCAGAGACAGACGGGCATTGTGGTCGCCATGCCCAGCCAGGTGGCATCG--------AGC---ACCGG-----------------------------------------------AACTC---CAGCCC------CATC--CGCCGGCGGC--------ATTCACCAG---------------------------------------------------------C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCA------C----------CA-------GCAGCAGCA---ACA------CCAGCA---------------C---CAGCA---GCAGCAGCACCAGCAGCA------ACAGCAGCAGC---AACAC---------------------C------------------------------------------------------------AACATCAGCAG----------------------------------------------CAG-CAACAGCAGCAC-CTTCAG-----------------------------------C-----------------AG------CAGC---AACACCAC---------------------------------C---------------------AG---C--------------------TGCAG---------------CAGC--------------------------------------A-------------------------
droYak3 X:19447733-19447943 - CAGC------------------------------------------------------------------------------------AATGA-----------------------------AAGTTGCAGCTTAGCGC---CAGCAGCAGCAGCAGCAGCA---GCAACA----------------------GCA--------------------------------------------------------------------------------------------------ACAGCAGCAGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCA------G--------------------------CAGCAGCAGC---------AGCAGCAGCAACAGCAGCAACAACA---GCAGCAGCAGCA------------------AC---AGCAGCA---GCAGCAGCAGCA---GCAGCAGCAGC------------------------------------------------------AGCAGCAGCAG----------------------------------------------CAGC--------------AGCAA-----------------------------CAG--------------------------------------------------CAGCAGC---------------------------AGC---------AGCAGCAGCAG----------CAACAA-CAGCAA---------------CAAC--------------------------------------A-------------------------
droEre2 scaffold_4929:14033854-14034067 - CGAC------------------------------------------------------------------------------------AGCAG-------------------------------------------------------CAGCAGCAG---CA---GCAGCA----------------------GCAGCA-----------------------------------------------------------------------------------------------GCAGCAGCAGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACA------G--------------------------CAGCAGCAGC---------AGCAGCAGCAA---------CAGCA---GCAGCAACAGCA---GC---AGCAG---CAGC---AGCAGCA---GAAGCAGCAGCA------GCAG---------------------------------------------------------------------------------------------CAG-----------------------CAGCAGC----------------AGCAACA---TCAGG----------CAA-----------------------CG---G---CAGCAACACC------------------------------------------------------ATCAT---CAT----------C------------------------------------GCAAGAATCAACTACAAGTACTACAGTGAAGCCTATGC------------TTACAAAAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
GTCA---------------------------------------------------------------------------------TCG--C---------------------------------------------------------CACCAC------CA---ACCGCA----------------------GCCC-G-TCTACGCTTCGGGTGCGGGG--AGAGGAGAGAGAGTG--------------------------------------------------------------------AGAGTAGAGAAAGGGGAGGAGGAGGAGAAGAA-------------GAAGAACCAAAACTTCAACATGAAGAAATCCG----CG------CGTCAGCAGCACC---------------------------------------------------------------AACAGCA-A------TCTCAATCTCAATTGAGAAAGGCAAAT----------------------------------------------------------------------------AAAAGAAC---AACCC---------------------C------------------------------------------------------------GACATCGACAG----------------------------------------------CATC-GGCATC-------GGCGG-----------------------------CG-----------------------------T---------------------CATTGTCACCGC---------------GGTCGTC---------------GC---C--------------------GCCG----------------CC---GTT----------------------------------C-------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........................................................................................................................................................................................................................................AGTG--------------------------------------------------------------------AGAGTAGAGAAAGGGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2142.259000009
.........................................................................................................................................................................................................................................AGTG--------------------------------------------------------------------AGAGTAGAGAAAGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1841.506011004
.........................................................................................................................................................................................................................................AGTG--------------------------------------------------------------------AGAGTAGAGAAAGGGGAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2331.003010002
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGCAAAT----------------------------------------------------------------------------AAAAGAAC---AACCC---------------------C------------------------------------------------------------.....................................................................................................................................................................................................................................................................................................................................2351.005050000
..........................................................................................................................................................................................................................................................................................................................................................................................TCCG----CG------CGTCAGCAGCACC---------------------------------------------------------------AACAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2541.004040000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGCAAAT----------------------------------------------------------------------------AAAAGAAC---AACCC---------------------C------------------------------------------------------------GA...................................................................................................................................................................................................................................................................................................................................2551.005050000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGCAAAT----------------------------------------------------------------------------AAAAGAAC---AACCC---------------------C------------------------------------------------------------G....................................................................................................................................................................................................................................................................................................................................2451.005050000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACAG----------------------------------------------CATC-GGCATC-------GGCGG-----------------------------C.......................................................................................................................................................................................................................2241.004031000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACAG----------------------------------------------CATC-GGCATC-------GGCGG-----------------------------........................................................................................................................................................................................................................2250.804030001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---------------------CATTGTCACCGC---------------GGTCGTC---------------GC---C--------------------G.......................................................................................2450.804310000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACAG----------------------------------------------CATC-GGCATC-------GGCGG-----------------------------CG-----------------------------T---------------------...................................................................................................................................................................2440.753030000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---------------------CATTGTCACCGC---------------GGTCGTC---------------GC---.............................................................................................................2250.603300000
.........................................................................................................................................................................................................................................AGTG--------------------------------------------------------------------AGAGTAGAGAAAGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.502000002
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACAG----------------------------------------------CATC-GGCATC-------GGCGG-----------------------------C.......................................................................................................................................................................................................................2340.502011000
..........................................................................................................................................................................................................................................................................................................................................................................................TCCG----CG------CGTCAGCAGCACC---------------------------------------------------------------AACAGCA-A------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2740.502020000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGCAAAT----------------------------------------------------------------------------AAAAGAAC---AACC........................................................................................................................................................................................................................................................................................................................................................................................................................2150.402110000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACAG----------------------------------------------CATC-GGCATC-------GGC.......................................................................................................................................................................................................................................................1950.402200000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGCAAAT----------------------------------------------------------------------------AAAAGAAC---AAC.........................................................................................................................................................................................................................................................................................................................................................................................................................2050.402020000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACCGC---------------GGTCGTC---------------GC---C--------------------GC......................................................................................1950.402200000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACCGC---------------GGTCGTC---------------GC---C--------------------G.......................................................................................1850.402200000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGCAAAT----------------------------------------------------------------------------AAAAGAAC---AACCC---------------------C------------------------------------------------------------GACA.................................................................................................................................................................................................................................................................................................................................2750.402020000
....................................................................................................................................................................................................................................................................................................................GTAGAGAAAGGGGAGGAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.331010000
...........................................................................................................................................................................................................................................TG--------------------------------------------------------------------AGAGTAGAGAAAGGGGAGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2230.331010000
.....................................................................................................................................................................................................................................................................................................................TAGAGAAAGGGGAGGAGGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2030.331010000
.........................................................................................................................................................................................................................................AGTG--------------------------------------------------------------------AGAGTAGAGAAAGGGGAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2330.331010000
............................................................................................................................................................................................................................................................................................................................................................................................................TCAGCAGCACC---------------------------------------------------------------AACAGCA-A------TCTCAATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2740.251010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACAG----------------------------------------------CATC-GGCATC-------GGCGG-----------------------------CG-----------------------------T---------------------...................................................................................................................................................................2540.251010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAG----------------------------------------------CATC-GGCATC-------GGCGG-----------------------------C.......................................................................................................................................................................................................................2140.251010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAG----------------------------------------------CATC-GGCATC-------GGCGG-----------------------------C.......................................................................................................................................................................................................................2040.251001000
..................................................................................................................................................................................................................................................................................................................................................................................................CG------CGTCAGCAGCACC---------------------------------------------------------------AACAGCA-A------TC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.251010000
.........................................................................................................................................................................................................................................AGTG--------------------------------------------------------------------AGAGTAGAGAAAGGGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.251000001
..........................................................................................................................................................................................................................................................................................................................................................................................TCCG----CG------CGTCAGCAGCACC---------------------------------------------------------------AACAGCA-A------T.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2840.251010000
...............................................................................................................................................................................................................................GAGGAGAGAGAGTG--------------------------------------------------------------------AGAGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.251000001
.....................................................................................TCG--C---------------------------------------------------------CACCAC------CA---ACCGCA----------------------GCCA-.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2240.251010000
.....................................................................................TCG--C---------------------------------------------------------CACCAC------CA---ACCGCA----------------------GCCC-G-TCTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2740.251010000
..........................................................................................................................................................................................................................................................................................................................................................................................TCCG----CG------CGTCAGCAGCACC---------------------------------------------------------------AACAGCA-.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.251010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGCAAAT----------------------------------------------------------------------------AAAAGAAC---AACCC---------------------C------------------------------------------------------------GACAT................................................................................................................................................................................................................................................................................................................................2850.201010000
..........................................................................................................................................................................................................TACGCTTCGGGTGCGGGG--AGAGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2450.201010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCACCGC---------------GGTCGTC---------------GC---C--------------------GCCG----------------CC---G..............................................................2650.201010000
...............................................................................................................................................................................................................................................................................................................................................................AAGAACCAAAACTTCAACATGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2350.201010000
.........................................................................................................................................................................................................................................................................................................................................GAGAAGAA-------------GAAGAACCAAAACTTCAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2750.201010000
..............................................................................................................................................................................................................................................................................................................................................................GAAGAACCAAAACTTCAACATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2250.201010000
..............................................................................................................................................................................................................CTTCGGGTGCGGGG--AGAGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2050.201010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCAAAT----------------------------------------------------------------------------AAAAGAAC---AACCC---------------------..................................................................................................................................................................................................................................................................................................................................................................................................2150.201010000
...............................................................................................................................................................................................................................................................................................................................................................................ACATGAAGAAATCCG----CG------CGTCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2350.201010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAG----------------------------------------------CATC-GGCATC-------GGCGG-----------------------------........................................................................................................................................................................................................................1950.201010000
...............................................................................................................................................................................................................................................................................................................................................................AAGAACCAAAACTTCAACATGAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2550.201001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACCGC---------------GGTCGTC---------------GC---C--------------------GCCG----------------....................................................................2150.201010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---------------------C------------------------------------------------------------GACATCGACAG----------------------------------------------CATC-GGCATC-------..........................................................................................................................................................................................................................................................2350.201010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCGACAG----------------------------------------------CATC-GGCATC-------GG........................................................................................................................................................................................................................................................2150.201010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---------------------CATTGTCACCGC---------------GGTCGTC---------------..................................................................................................................2050.201100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACCGC---------------GGTCGTC---------------GC---C--------------------GCC.....................................................................................2050.201100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCGC---------------GGTCGTC---------------GC---C--------------------GC......................................................................................1850.201100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGACAG----------------------------------------------CATC-GGCATC-------GGC.......................................................................................................................................................................................................................................................2150.201100000
...........................................................................................................................................................................................................................G--AGAGGAGAGAGAGTG--------------------------------------------------------------------AG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1850.201010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---AACCC---------------------C------------------------------------------------------------GACATCGACAG----------------------------------------------CATC-GGCA...................................................................................................................................................................................................................................................................2650.201010000
........................................................................................................................................................................................................TCTACGCTTCGGGTGCGGGG--AGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2350.201010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCGACAG----------------------------------------------CATC-GGCATC-------G.........................................................................................................................................................................................................................................................2050.201010000
..........................................................................................................................................................................................................TACGCTTCGGGTGCGGGG--.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1850.201010000
...............................................................................................................................................................................................................................................................................................................................................................AAGAACCAAAACTTCAACATGAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2450.201010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGCAAAT----------------------------------------------------------------------------AAAAGAAC---AACCC---------------------C------------------------------------------------------------GAC..................................................................................................................................................................................................................................................................................................................................2650.201010000
..............................................................................................................................................................................................................................AGAGGAGAGAGAGTG--------------------------------------------------------------------AGAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1950.201000001
...........................................................................................................................................................................................................ACGCTTCGGGTGCGGGG--AGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2050.201010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCAAAT----------------------------------------------------------------------------AAAAGAAC---AACCC---------------------C------------------------------------------------------------GA...................................................................................................................................................................................................................................................................................................................................2450.201010000
dp5
TTCA---------------------------------------------------------------------------------CAG--CGGTGGAGG-------------------------------------------------CGGCTG------CG------TCG----------------------GCT--------------------------------------------------------------------------------------------------TCGGCAGCGGC--------------------------------GTCGATGTTGATG----------------------------------------ATCACTTCAAGTACAGAGACACCAGCGG---------------------------------------------CAGCAC------------------------------------------CAGCG---GCC---GCAC---------------------CAATTAATGCCGCATCAACAACA---ACA---------------------ACA------------------------------A------------------------------------------------------------CAGCAG---------------------CCATA-GCTGCAACACAAATAC----AACCAGA---AG-CAACCC-----------------------------ATCAAAC-----------------TG------CAGC---ATCGTCT---------------------------------AC---------------------AG---C--------------------CATAA---------------CTAC--------------------------------------A-------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG------CAGC---ATCGTCT---------------------------------AC---------------------AG---C--------------------CAT.....................................................................................2112.0020200000000
................................................................................................................................................................................................................................................................................................................................................................................................................GTACAGAGACACCAGCGG---------------------------------------------C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA---ACA---------------------ACA------------------------------A------------------------------------------------------------CAGCAG---------------------CCAT..............................................................................................................................................................................................................................................................................................2111.0010000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................ACAGAGACACCAGCGG---------------------------------------------CAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100000
TTCA---------------------------------------------------------------------------------CAG--CGGTGGAGG-------------------------------------------------CGGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAAATAC----AACCAGA---AG-CA.........................................................................................................................................................................................................................................................2011.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAACAACA---ACA---------------------ACA------------------------------A------------------------------------------------------------CA...........................................................................................................................................................................................................................................................................................................................20200.3570610000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATCAACAACA---ACA---------------------ACA------------------------------A------------------------------------------------------------CA...........................................................................................................................................................................................................................................................................................................................2140.2510100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAACAACA---ACA---------------------ACA------------------------------A------------------------------------------------------------CAG..........................................................................................................................................................................................................................................................................................................................20110.0910010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACA---ACA---------------------ACA------------------------------A------------------------------------------------------------CAGCAG---------------------C.................................................................................................................................................................................................................................................................................................20200.0510000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAACAACA---ACA---------------------ACA------------------------------A------------------------------------------------------------C............................................................................................................................................................................................................................................................................................................................19200.0510100000000
droWil2
GCAA---------------------------------------------------------------------------------CAG--CAGCAGCGA-------------------------------------------------ATGCAA------CA---------------------------------------------------------------------------------------------------GCAACA---------GCAACAGCAG---------CAACA---------------------------------------------------------------------------------------------------------------ATTGCAGCAA---------CAACAACAA---CAGCAGC----------------------------AGCA------A--------------------------CAACAGCAAC---------AGCAACAA------------CAACA---GCAGCAGCAACA---GCAACAACA---GCAGC---AGCAGCA---GCA------------ACTGCAAC---------------------------------------------AACAGCAGCAGCAACAGCAACAA----------------------------------------------CAAC--------------AACAT-----------------------------CAG--------------------------------------------------CAGCAAC---------------------------AGC---------AACAACAGCAG----------CAACAG-CAACAA---------------CA---ACA-----------------------------------------------------------CSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................................................................................................................................................................................................................................................A---------------------------------------------------------------------------------------------------------------ATTGCAGCAA---------CAACAACAA---CAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24100.20202000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAA---CAGCAGC----------------------------AGCA------A--------------------------CA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.20400040
..................................................................................................................................................................................................................................................................................................................................................................................................................................CAA---------CAACAACAA---CAGCAGC----------------------------A.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.20400040
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------------CAG--------------------------------------------------CAGCAAC---------------------------AGC---------AACAACAGCAG----------................................................................................................25130.15201010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC--------------AACAT-----------------------------CAG--------------------------------------------------CAGCAAC---------------------------A................................................................................................................................19200.10200020
...........................................................................................................................................................................................................................................................................................................A---------------------------------------------------------------------------------------------------------------ATTGCAGCAA---------CAACAACAA---CAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23100.10101000
........................................................................................................................................................................................................................................................................................................AACA---------------------------------------------------------------------------------------------------------------ATTGCAGCAA---------CAACAACAA---CAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27100.10101000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAC---------AGCAACAA------------CAACA---GCAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.10202000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAC---------------------------------------------AACAGCAGCAGCA....................................................................................................................................................................................................................................................................................................................................18200.10200020
...........................................................................................................................................................................................................................................................................................................A---------------------------------------------------------------------------------------------------------------ATTGCAGCAA---------CAACAACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19130.08100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAG----------CAACAG-CAACAA---------------CA---ACA-----------------------------------------------------------C26140.07101000
.................................................................................................................................................................A---------------------------------------------------------------------------------------------------GCAACA---------GCAACAGCAG---------CAACA---------------------------------------------------------------------------------------------------------------ATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25160.06100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAT-----------------------------CAG--------------------------------------------------CAGCAAC---------------------------AGC---------AACAA................................................................................................................23170.06101000
.....................................................................................................................................................TGCAA------CA---------------------------------------------------------------------------------------------------GCAACA---------GCAACAGCAG---------C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24170.06101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---GCAGC---AGCAGCA---GCA------------ACTGCA................................................................................................................................................................................................................................................................................................................................................................................................22170.06101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------------------------------------------CAAC--------------AACAT-----------------------------CAG--------------------------------------------------CAGCAAC---------------------------AGC---------.....................................................................................................................23180.06100100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAA----------------------------------------------CAAC--------------AACAT-----------------------------CAG--------------------------------------------------CAGCAAC---------------------------.................................................................................................................................24190.05100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAA----------------------------------------------CAAC--------------AACAT-----------------------------CAG--------------------------------------------------CAGCAAC---------------------------A................................................................................................................................25190.05101000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAA---CAGCAGC----------------------------AGCA------A--------------------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA------------CAACA---GCAGCAGCAACA---GCA................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAACAA----------------------------------------------CAAC--------------AACAT-----------------------------CAG--------------------------------------------------C..................................................................................................................................................................25200.05101000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA----------------------------------------------CAAC--------------AACAT-----------------------------CAG--------------------------------------------------CAGCAAC---------------------------.................................................................................................................................22200.05100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC---------AACAACAGCAG----------CAACAG-CAAC.....................................................................................24200.05100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................GCAA---------CAACAACAA---CAGCAGC----------------------------AGCA------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
..................................................................................................................................................................................................................................................................................................................................................................................................................................CAA---------CAACAACAA---CAGCAGC----------------------------AGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC---------AGCAACAA------------CAACA---GCAGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAC---------AGCAACAA------------CAACA---GC................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---CAGCAGC----------------------------AGCA------A--------------------------CAACAGCAAC---------A.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA---GCAACAACA---GCAGC---AGCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC--------------AACAT-----------------------------CAG--------------------------------------------------CAGCAAC---------------------------.................................................................................................................................19200.05100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAC---------------------------AGC---------AACAACAGCAG----------................................................................................................20200.05101000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC---------------------------------------------AACAGCAGCAGCAACA.................................................................................................................................................................................................................................................................................................................................20200.05100100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAA------------CAACA---GCAGCAGCAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACA---GCAACAACA---GCAGC---AGC............................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---GCAGCAGCAACA---GCAACAA............................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAA------------CAACA---GCAGCAGCAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAA------------CAACA---GCAGCAGCAACA---...................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
........................................................................................................................................................................................................................................................................................................AACA---------------------------------------------------------------------------------------------------------------ATTGCAGCAA---------CAACAACAG---.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAA------------CAACA---GCAGCAGCAACA---G..................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAGCAACAGC...............................................................................................................................................................................................................................................................................................................................18200.05100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAA---CAGCAGC----------------------------AGCA------A--------------------------CAACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAA---CAGCAGC----------------------------AGCA------A--------------------------CAACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAA----------------------------------------------CAAC--------------AACAT-----------------------------CAG--------------------------------------------------CAGC...............................................................................................................................................................22200.05101000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC---------AACAACAGCAG----------CAAC............................................................................................18200.05100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAACA---GCAACAACA---GCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC---------------------------------------------AACAGCAGCAGCAACAGC...............................................................................................................................................................................................................................................................................................................................21200.05101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC---------AGCAACAA------------CAACA---GCAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
..........................................................................................................................................................................................................................................................................A---------GCAACAGCAG---------CAACA---------------------------------------------------------------------------------------------------------------ATTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101000
........................................................................................................................................................AA------CA---------------------------------------------------------------------------------------------------GCAACA---------GCAACAGCAG---------C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100001
droVir3
TTTG---------------------------------------------------------------------------------CCG--C-----------CCAGCTGAATGCGACAACAGCTGCCGCGGCGCAGCCTCAACAG---CAGCC------------GCATCT----------------------GCA-----------------------------------------------------GCA---------GCA------------GCAGCAACAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCATC--------------------TGCAGCA---GCA---GCAA---CA---------------T---CTGCA---GCAACAGCAGCT---GCA------ACAGCAGC------AGCA------------------TCT------------------GCAGC---------------------------AACAGCAGTTGCAGCAGCAACAA----------------------------------------------CAAC--------------AACAA-----------------------------CA-----------------------------G---------------------CAGCAGC---------------------------AAC---------AGCAGCCGCCG----------CAGCAGC-AGCAGCAGGAGCTGAAGAAGAA---ACG-----------------------------------------------------------CSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................................................................................................................................................................................................................................................A------------GCAGCAACAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCATC--------------------TGCAGCA---GCA---......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--------------------TGCAGCA---GCA---GCAA---CA---------------T---CTGCA---..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000010000000000000000000000000
...........................................................................................................................................CAACAG---CAGCC------------GCATCT----------------------GCA-----------------------------------------------------GCA---------G.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.501001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGC------AGCA------------------TCT------------------GCAGC---------------------------AACAGC...........................................................................................................................................................................................................................................................................................................................................2220.501000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................................................................................................................................................AACAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCATC--------------------TGCAGCA---............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.502002000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCT---GCA------ACAGCAGC------AGCA------------------......................................................................................................................................................................................................................................................................................................................................................................................................2380.131000000000000000100000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................CAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCATC--------------------TGCAGCA---GCA---GC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22100.101000000000000000000000000000000000000000000000000000000000001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCGCCG----------CAGCAGC-AGCA....................................................................................19190.051000000000000000000000000010000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAA----------------------------------------------CAAC--------------AACAA-----------------------------CA-----------------------------G---------------------CAGC...............................................................................................................................................................21200.051000000000000001000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------------------------------------------CAAC--------------AACAA-----------------------------CA-----------------------------G---------------------CAGCAGC---------------------------A................................................................................................................................21200.051000000000000000000000100000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAA----------------------------------------------CAAC--------------AACAA-----------------------------CA-----------------------------G---------------------CA.................................................................................................................................................................23200.051000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC--------------AACAA-----------------------------CA-----------------------------G---------------------CAGCAGC---------------------------AAC---------AGC..................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................CA-----------------------------------------------------GCA---------GCA------------GCAGCAACAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGC---------------------------AAC---------AGCAGCCGC............................................................................................................18200.051000000000000000000000000000000000000000000000000000000000000001
..........................................................................................................................................................................T----------------------GCA-----------------------------------------------------GCA---------GCA------------GCAGCAACAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAA----------------------------------------------CAAC--------------AACAA-----------------------------CA-----------------------------G---------------------CAGC...............................................................................................................................................................22200.051000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAA----------------------------------------------CAAC--------------AACAA-----------------------------CA-----------------------------G---------------------CAGCAGC---------------------------.................................................................................................................................25200.051000000000000000000000001000000000000000000000000000000000000000
droMoj3
CAGC------------------------------------------------------------------------------------AGCCG-------------------------------------------------------CCGCCG------CC---GCATAT----------------------GCA-----------------------------------------------------GCA---------GCA------------GCAGCTGCAGCAACACTTCCAGCAGCAGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACACTACCAGCA----GCAGCA-------GCAGCAGCA---GCAGC---AG------CA------------G------------CACTATCA------GCA------GCAGCAGCTGC---ATCAGCACTTCCAGCAGCAGCAGCAGCAACACT---------------------------------------------------------------------------------------------------------------------------------ATCAGCAGCAGCAACACT----GT----------CAG-----------------------CA---G---CAGCAACACTG------------------------------------------------------TCAG---CAG----------CAGCAG-CTGCAG---------------CA---ATA-----------------------------------------------------------CSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTACCAGCA----GCAGCA-------GCAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2240.251100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTACCAGCA----GCAGCA-------GCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.201000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTACCAGCA----GCAGCA-------GCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2050.201100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCA---GCAGC---AG------CA------------G------------CAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.102000020
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTACCAGCA----GCAGCA-------GCAGCAGCA---A...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26140.071100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCAGCA----GCAGCA-------GCAGCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000010
droGri2
TCCT---------------------------------------------------------------------------------CAT--C----------------T-----------------------------------------GGGAG------CG----------------------------------------------GCGGGCGCAGTGGCG---TTAA----CACACGCTCTGGTCAGCAGCAGCAGCAGCAGCAGCATCAGCAG------------------CAGCATCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCATCAAC--------------------AGCAGCA---GCA---TCGG---CA---------------G---CAGCA---GCAGCATCAGCA---GCA------GCAGCAGCAGC---GTCAA---------------------C------------------ATC---------------------------AGCAGCA---------------G------------------CAGCAGCAGCAG----------------CTAA--------------AACAA-----------------------------CAG---C-----------------------AG------------------------CAGC---------------------------AAAAA------CAGCAG---CAGCAGCAGT-----------CAAAA---------------CAAC--------------------------------------A-------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAC--------------------AGCAGCA---GCA---TCGG---CA---------------G---C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................23150.07101
........................................................................................................................................................................................................................................................................................................AGCATCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCATCAAC--------------------AGCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23180.06110
droAna3
CAGC------------------------------------------------------------------------------------AATGG-------------------------------------------------------GGGCTC------CGCCGGCGCCA----------------------GCGGCA---------------------------GCAT----CGAGCTCCTC------------------------------------------------------------------------------------------------TGCCCG----------------------------------------CCCAGCGGCAGCAGCAGCATC---------------------------------------------------------------------------------------------------------AGCG---GCA---GTGC------------------------CAGCTTCAGCAGCAGCAGTG---GTGCCAGCAG---CAGC------AACA------------------CCC------------------ACAGCA----------------------------CAGCA--------------------GTCAGTAG----------------------------------TGAG--------------TCCAA-----------------------------CAA--------------------------------------------------CAACAGT---------AGCAGCAGCAGCAGCAGC---------------AG---C--------------------AGCAA---------------CAAC--------------------------------------A-------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----------------------------CAA--------------------------------------------------CAACAGT---------AGCAGCAGC..........................................................................................................................................2040.251010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGT---------AGCAGCAGCAGCAGCAGC---------------..................................................................................................................2360.171010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---------AGCAGCAGCAGCAGCAGC---------------AG---C--------------------AGC.....................................................................................25190.051010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT---------AGCAGCAGCAGCAGCAGC---------------AG---C--------------------........................................................................................23200.051010000
droBip1
CAGC------------------------------------------------------------------------------------GGTTG-----------------------------------CC-------------------GGTTC------CG-------------------------------------------------GGCGGAAGC--GGAAGCGCAAGAAGGACACCAG-TGCTGCAGCGGCGGCGGCAGCAGCAGCGGCAGC------------------AGCC-CA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACAGCAGC--------------------TGCAGCA---ACA---GCAC---------------------CAGCAGCAGCAACACCAGCAGCA---ACA---------------------ACA------------------------------G------------------------------------------------------------CAGCAA---------------------CATCA-GCTGCAACAGCACCAG----CAACAGT---TA-CAACAC-----------------------------CAGCAGC-----------------AG------CAGC---AACAGCA---------------------------------AC---------------------AG---C------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TCAG---------------------------------------------------------------------------------CAG--CAA-------------------------------------------------------CAACAG------CA---GCTGCA----------------------GCAGCA-----------------------------------------------------------------------------G------------------CAGCAA---------------------------------------------------------------------------------------------------------------TTGCTGCAGTTGTCCATCCAACAGGCGGCTCA---TC-------------------------------ACCATCAGC--------------------AGGAGCA---GCA---CCGT------------------------CAACAGCAGCAGCAGCAGCA---ACACCA------GCAAC------------------------------------------------------------------------------------------------------AGC-------------------------------------AG----------CAGCAACAACAGC-AGCAG-----------------------------------C--------------------AGCAA---C---AGCACCATCAGCAGCAACAGCATCCAGGCCA---------AG---------------------CG---CCG----------CCGCCG----CAG---------------CAACAG--CC--------------------------------G-------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CAGC------------------------------------------------------------------------------------AGCAG-------------------------------------------------------CAGCAT------CA---ACAGCAGCAGCAGAGCATGCATCA----CCA--------------------------------------------------------------------------------------------------TCAGCAGCAGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAACATATGCA----ACAGCA-------GCAGCAACA---ACA---CCAG---CA---------------A---CAGCA---ACAACATCAGCA------------------AC---AGCAACA------------------------------A------------------------------------------------------------CATCAA---------------------CAACA-GCAGCAGCAGCATCAG----CAACAGC---AG-CAACAT-----------------------------CAACAAC-----------------AG------CAGC---AACATCA---------------------------------AC---------------------AG---CAG----------CAGCAG----CAA---------------CAACAT--CCC-------------------------------A-------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
ACAG---------------------------------------------------------------------------------CAG--CAG-------------------------------------------------------CAGCAG------CA---ACAACA----------------------GCAACAGT--------------------------------------------------------------A------------GC------------------AGCAGCAAC-----------------------------------AACAA---CA----------------------------------------------------------------------------CATCCAATAGT--GCGCA-------------------------------------------G----------CA-------GCAGCAGCA---ACA------CCAACA---------------C---CATCA---GCAGCAGCAGCA------------------GC---AGCAGCA------------------------------GCATCACCAGCAGCAACGAGTTGTCGCCAGTAGCAACCAGCAACAACAATTGCAACAGCAGCAG----------------------------------------------CAGC--------------AGCAG-----------------------------CA-----------------------------G---------------------CAGCAAC---------------------------AGC---------AGCAGCAGCAG----------CAGCAGC-AGCAACAGCAGCATGATAATGG---AC-----------------------------------C-------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TACA---------------------------------------------------------------------------------GCT--CGGCGGCAG-------------------------------------------------CGGCAG------CA---------------------------------------------------------------------------------------------------GCA------------GCAGCCGCCG-----------GC--------------------------------------GGCGGGG-----AGCTGAATCACCTGATGAACATGTACCA-TCTGCCCGACGA------------GCAGCGCCACCTGCTGCAC----------------------------------------------------------------TACCAGACTGACTCGCCGG--ACTTGCAGCA---GCA---GCAC---------------------CAGGCGATGCAGCAGCAACAGCA---GCA---------------------GCA------------------------------G------------------------------------------------------------CAGCAC---------------------CAACA-GATCCCGCAG----------CAACACCAGACGA-TGCAG-----------------------------CAG--------------------------CAA---C---AGCACCAC---------------------------------C------------------TGCAG---CACCAGCAATCGC--------TGAGG---------------ACGA--------------------------------------T-------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
CAGC------------------------------------------------------------------------------------AGCAG-------------------------------------------------------CAGCAG------CA---GAGACA----------------------GCAGCAAT--------------------------------------------------------------C------------GC------------------AGCCACAAC-----------------------------------AACAG---CA-------------------------------------------------------------ATTGCAGCAA---------CAACA---------------------------------------------------GGCA----ATTACA-------GCTGCGACA---ACGGCAGC------A---------------ACATGCAAT------------------GCC------ACAGCAGCAGC---AACAA---------------------C------------------ATC---------------------------CTCGGCA---------------G------------------------CAG-----------------------CAGCAACAGCCA-CATCAG-----------------------------CAG---C-----------------------AG---C---AGCAACAC---------------------------------C------------------AACAA---CATCCACAAACAACGACAAC-AACAGCGATAACTTTGCAATGG---ACGCC--------------------------------A-------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TAGG---------------------------------------------------------------------------------TGG--TGGTGGTGGTGCCCACGTTATTATAACA------------------------------------------------CCGCCGCCGAGGGACGAACTTCACCAG---------------------------------------------------------CA---------GCA------------GCAGTTGC---------------------------------------------------------------------------------------------------------------------AGCATC---------------------------------------------------------------ACCACCA-GCA--------------------------GCAGCAACA---GCA---GCAG---CA---------------G---CTGCAGCAGCAGCAGCTGCA---GC---------------------AGCA------------------------------G------------------------------------------------------------CATCCTCACCACCAGCCAGCGCACCACCTGCCG----------------CTGC--------------AACAA-----------------------------CAG---C-----------------------AG------------------------------------------------C---AGCAACAGTCGCACCACCCA---CTCCCGCACG-----------CACCT---------------CACC--------------------------------------A-------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
GAC-------------------------------------------------------------------------------------AGCGG-------------------------------------------------------CAGCGA------CGACAGCGGCA----------------------GCGACG-----------------------------------------------------------------------------------------------ACAGCGGCGGC--------------------------------GACGACAGC----------------------------------------GGCAGCGACAGCAGCGGCGGC---------------------------------------------------------------------------------------------------------GACA---GCA---GCGG------------------------CGGCGACAGCAGCGGCAGCG---ATA---------------------ACA---GCG------------GCAGCGACGAC------------------------------------------------------GGCGGCAGCGAC---GA------------------C---------------------------------------GGCGG-----------------------------CG-----------------------------A---------------------CAACGACGACGGCAGCA---------GC---------------------GG---CGA----------CGACGG----CAG---------------CGACAG--CC--------------------------------AGAACACATACAAAATCATACGAAATSizeHit CountTotal NormTotal
No Reads
dm3
CCCAC--------------------------------------------------GGCCAGCCAATTGGCGGTGGCCTCCCAAGC---GGCGA-------------------------------------------------------TGGCAG------CG---------------------------------------------------------------------------------------------------GCA------------GCCGCGGCGG---------CCTTC-----AATGCAGCGC--------------------------------------------------------------------------------------------------------AA---------CAGCAGCAA---CAGCAGC----------------------------AGCA------G--------------------------CAGCAGCAAC---------AACATCAA------------CACCA---GCAGCAGCAGCA---GCATCAGCAG---TCGC---AACAGCA---GCA------------GCAGCAACAGCAG------------------------------------------------------------CAGT---------------------------------------------------------------------CGCAACAACAACTCCA--TGCCCTTGCGCAG---CAGCACATGCTGCAATTG--CAGCCG---C---AACACCAC---------------------------------C---------------------AG---CAG----------CAGCAG----CA----------------CA---ATG-----------------------------------------------------------CSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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droSim2
CAAC------------------------------------------------------------------------------------AGAGG-------------------------------------------------------ATGCAA------AT-------------------------------GCA-----------------------------------------------------GCA---------GCA------------GCCGCAACAG-----------AT--------------------------------------TGTTGTA-----A----------------------------------------AC--------------------------------------CAGCAAATACTCAG---TGATCCTCAGCGATTGCAGTACCTACAACA-ACA------G----------CA-------GTTAATGCA---AAA------ACA------------------G---CAACAGCAGCAGCAACAACA---AC------------------AGCAGCA------------------------------G------------------------------------------------------------CAG--------------------------------------------------CAACAACAGCTAG-TGG---GACCACAACAACAGCA--AATCCTTATACAA---C-----------------------AGCAGC---------------------------------------------------AAACA------CCCCAA---CAACAGCAGA-----------TACTG---------------CAGC--------------------------------------A-------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
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droSec2
CGCACATGGTGGAGGAGATTGGCTGCCAGAGACAGACGGGCATTGTGGTCGCCATGCCCAGCCAGGTGGCATCG--------AGC---ACCGG-----------------------------------------------AACTC---CAGCCC------CATC--CGCCGGCGGC--------ATTCACCAG---------------------------------------------------------C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCA------C----------CA-------GCAGCAGCA---ACA------CCAGCA---------------C---CAGCA---GCAGCAGCACCAGCAGCA------ACAGCAGCAGC---AACAC---------------------C------------------------------------------------------------AACATCAGCAG----------------------------------------------CAG-CAACAGCAGCAC-CTTCAG-----------------------------------C-----------------AG------CAGC---AACACCAC---------------------------------C---------------------AG---C--------------------TGCAG---------------CAGC--------------------------------------A-------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
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..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA---------------C---CAGCA---GCAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510010
droYak3
CAGC------------------------------------------------------------------------------------AATGA-----------------------------AAGTTGCAGCTTAGCGC---CAGCAGCAGCAGCAGCAGCA---GCAACA----------------------GCA--------------------------------------------------------------------------------------------------ACAGCAGCAGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCA------G--------------------------CAGCAGCAGC---------AGCAGCAGCAACAGCAGCAACAACA---GCAGCAGCAGCA------------------AC---AGCAGCA---GCAGCAGCAGCA---GCAGCAGCAGC------------------------------------------------------AGCAGCAGCAG----------------------------------------------CAGC--------------AGCAA-----------------------------CAG--------------------------------------------------CAGCAGC---------------------------AGC---------AGCAGCAGCAG----------CAACAA-CAGCAA---------------CAAC--------------------------------------A-------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
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.....................................................................................................................................................................GCAACA----------------------GCA--------------------------------------------------------------------------------------------------ACAGCAGCAGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCA------G--------------------------CA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000000000
................................................................................................................................................GCAGCAGCAGCAGCAGCA---GCAACA----------------------GC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC--------------AGCAA-----------------------------CAG--------------------------------------------------CAGCAGC---------------------------AGC---------AGCA.................................................................................................................24200.05100000010000
................................................................................................................................................GCAGCAGCAGCAGCAGCA---GCAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCA------------------AC---AGCAGCA---G....................................................................................................................................................................................................................................................................................................................................................................................................................19200.05101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAACAACA---GCAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGC---------AGCAGCAGCAACAGCAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000000000
..............................................................................................................................................................AGCA---GCAACA----------------------GCA--------------------------------------------------------------------------------------------------ACAGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--------------------------CAGCAGCAGC---------AGCAGCAGCAACAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000000000
........................................................................................................................................................................ACA----------------------GCA--------------------------------------------------------------------------------------------------ACAGCAGCAGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCA------G--------------------------CA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC------------------------------------------------------AGCAGCAGCAG----------------------------------------------CAGC--------------AGCAA-----------------------------C.......................................................................................................................................................................................................................23200.05101000000000
droEre2
CGAC------------------------------------------------------------------------------------AGCAG-------------------------------------------------------CAGCAGCAG---CA---GCAGCA----------------------GCAGCA-----------------------------------------------------------------------------------------------GCAGCAGCAGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACA------G--------------------------CAGCAGCAGC---------AGCAGCAGCAA---------CAGCA---GCAGCAACAGCA---GC---AGCAG---CAGC---AGCAGCA---GAAGCAGCAGCA------GCAG---------------------------------------------------------------------------------------------CAG-----------------------CAGCAGC----------------AGCAACA---TCAGG----------CAA-----------------------CG---G---CAGCAACACC------------------------------------------------------ATCAT---CAT----------C------------------------------------GCAAGAATCAACTACAAGTACTACAGTGAAGCCTATGC------------TTACAAAATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................................................................................................................................................................................................................................................................................................GCAGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACA------G--------------------------CAGCAGCAGC---------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1020200000
...........................................................................................................................................................................................................................................................................................................AGCAGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACA------G--------------------------CAGCAGCAGC---------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0511000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAA---------CAGCA---GCAGCAACAGCA---GC---AGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................29200.0510100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCA---GC---AGCAG---CAG...................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0511000000
.......................................................................................................................................................................................................................................................................................................CAGCAGCAGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACA------G--------------------------CAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC---AGCAGCA---GAAGCAGCA............................................................................................................................................................................................................................................................................................................................................................................................................19200.0510001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGCAGCAGCA------GCAG---------------------------------------------------------------------------------------------CAG-----------------------C.......................................................................................................................................................................................................................................................................20200.0510100000

Generated: 06/08/2015 at 04:59 PM