ID:

dpe_1956

 Coordinate:

scaffold_62:214758-214908 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dper\GL18061-cds]; exon [dper_GLEANR_19915:3]; intron [Dper\GL18061-in]

Repeatable elements

NameClassFamilyStrand
(GA)nSimple_repeatSimple_repeat+
mature
  1. scaffold_21:100717-100734 +
  2. scaffold_25:1042770-1042787 +
  3. scaffold_27:57906-57923 +
  4. scaffold_27:164752-164769 +
  5. scaffold_27:388500-388517 +
  6. scaffold_1:2675894-2675911 +
  7. scaffold_2:2178221-2178238 +
  8. scaffold_3:5279509-5279526 +
  9. scaffold_4:2211605-2211622 +
  10. scaffold_4:3129512-3129529 +
  11. scaffold_5:6650101-6650118 +
  12. scaffold_7:2441269-2441286 +
  13. scaffold_11:1526703-1526720 +
  14. scaffold_13:1062572-1062589 +
  15. dpe_1956  scaffold_62:214783-214800 +
  16. scaffold_15:654256-654273 +
  17. scaffold_20:479597-479614 +
  18. scaffold_23:748283-748300 +
  19. scaffold_24:953953-953970 +
  20. scaffold_401:8229-8246 +
star
  1. scaffold_10:826247-826266 +
  2. scaffold_0:876501-876520 +
  3. scaffold_0:4349575-4349594 +
  4. scaffold_0:5034323-5034342 +
  5. scaffold_0:10716636-10716655 +
  6. scaffold_2:4896374-4896393 +
  7. scaffold_2:8924702-8924721 +
  8. scaffold_4:1351857-1351876 +
  9. scaffold_7:2411601-2411620 +
  10. scaffold_12:1966676-1966695 +
  11. scaffold_13:1416940-1416959 +
  12. dpe_1956  scaffold_62:214758-214777 +
  13. scaffold_17:518091-518110 +
  14. scaffold_24:995404-995423 +
  15. scaffold_40:301899-301918 +
  16. scaffold_28:963244-963263 +
  17. scaffold_29:708423-708442 +
  18. scaffold_33:632998-633017 +
  19. scaffold_739:8712-8731 +
  20. scaffold_2433:3968-3987 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CTTTTTCACACCAACACCAGCCTAGTAGGCGCACACTGCAGTAGGAAGAGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAATGGGTGAGCCACTAAAACTTCATGTGTTCCTTCTGGCTATACCTACAATCTTGTAGGTATGGGATTCTCTATAATTATACGTCTTTGTTTTTGTCGTATCTCCAGAAATTTGAACCAAGCTTGATTCAGCGCTATATCACAGGAGTCTGCATACA
**************************************************...........................................************************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V111
male body		 V057
head
 M042
female body
 V042
embryo
 V050
head
.................................................................................................................................................CTTGTGGGTAGGGGATTCT....................................................................................... 19 2 1 36.00 36 20 11 5 0 0
.................................................................................................................................................CTTGTGGGTATGGGAATCT....................................................................................... 19 2 2 28.00 56 38 3 15 0 0
.................................................................................................................................................CTTGTGGGTAGGGGATTCTC...................................................................................... 20 2 1 8.00 8 7 0 1 0 0
................................................................................................................................................TCTTGTGGGTAGGGGAATCT....................................................................................... 20 3 5 6.20 31 14 4 13 0 0
.................................................................................................................................................CTTGTAGGTAGGGGAATCT....................................................................................... 19 2 2 6.00 12 8 3 1 0 0
..................................................................................................................................................TTGTGGGTATGGGAATCT....................................................................................... 18 2 12 5.25 63 23 9 30 0 1
.................................................................................................................................................CTTGTGGGTATGGGAATC........................................................................................ 18 2 4 4.25 17 6 4 7 0 0
..................................................................................................................................................TTGTGGGTAGGGGATTCTC...................................................................................... 19 2 4 3.75 15 12 1 2 0 0
..................................................................................................................................................TTGTGGGTAGGGGATTCT....................................................................................... 18 2 11 2.91 32 4 9 19 0 0
.................................................................................................................................................CTTGTGGGTAGGGGATTC........................................................................................ 18 2 3 2.00 6 0 4 2 0 0
.................................................................................................................................................CTTGTGGGTATGGGAATCTC...................................................................................... 20 2 2 1.50 3 3 0 0 0 0
.................................................................................................................................................CTTGTGGGTAGGGGAGTCT....................................................................................... 19 3 20 1.40 28 14 11 3 0 0
.................................................................................................................................................CTTGTGGGTAGGGGACTCT....................................................................................... 19 3 20 1.35 27 6 15 5 1 0
..................................................................................................................................................TTGTGGGTATGGGATTCTC...................................................................................... 19 1 1 1.00 1 0 1 0 0 0
..................................................................................................................................................TTGTGGGTATGGGAATCTC...................................................................................... 19 2 4 1.00 4 4 0 0 0 0
..................................................................................................................................................TTGTAGGTAGGGGAATCT....................................................................................... 18 2 7 0.86 6 0 2 4 0 0
...................................................................................................................................................TGTGGGTAGGGGATTCTC...................................................................................... 18 2 13 0.54 7 4 0 3 0 0
.................................................................................................................................................CTTGTGGGTAAGGGATTCT....................................................................................... 19 2 2 0.50 1 0 1 0 0 0
.................................................................................................................................................CTTGTGGGTATGGGAATCTCTTT................................................................................... 23 3 2 0.50 1 0 1 0 0 0
................................................................................................................................................TCTTGTGGGTAGGGGAATCTC...................................................................................... 21 3 5 0.40 2 2 0 0 0 0
.................................................................................................................................................CTTGTGGGTAGGGGAATCTCTA.................................................................................... 22 3 3 0.33 1 0 1 0 0 0
...............................................................................................ATGGGTGCGCCGCTGAAACT........................................................................................................................................ 20 3 3 0.33 1 0 1 0 0 0
................................................................................................................................................CCTTGTGGGTAGGGGATTCT....................................................................................... 20 3 6 0.33 2 1 1 0 0 0
.................................................................................................................................................CTTGTTGGTATGGGAATC........................................................................................ 18 2 3 0.33 1 0 1 0 0 0
.................................................................................................................................................CTTGTTGGTAGGGGAATCTC...................................................................................... 20 3 9 0.33 3 2 0 1 0 0
...............................................................................................................................................ATCTTGTGGGTAGGGGAATCT....................................................................................... 21 3 3 0.33 1 0 1 0 0 0
.................................................................................................................................................CTTGTGGGTAGGGGACTCTC...................................................................................... 20 3 10 0.30 3 1 2 0 0 0
................................................................................................................................................CCTTGTGGGTATGGGAATCT....................................................................................... 20 3 7 0.29 2 0 0 2 0 0
.................................................................................................................................................CTTGTAGGTACGGGAATCT....................................................................................... 19 2 4 0.25 1 0 1 0 0 0
.............................................................................................................................................CAATCTTGTGGGTAGGGGAAT......................................................................................... 21 3 4 0.25 1 0 0 1 0 0
.................................................................................................................................................CTTGTAGGTAGGGGAATC........................................................................................ 18 2 4 0.25 1 0 1 0 0 0
...................................................................................................................................................TGTGGGTATGGGAATCTC...................................................................................... 18 2 17 0.24 4 2 1 1 0 0
.................................................................................................................................................CTTGTGGGTATGGGAACCT....................................................................................... 19 3 12 0.17 2 0 1 1 0 0
..................................................................................................................................................TTGTGGGTATGGGATTCC....................................................................................... 18 2 6 0.17 1 0 1 0 0 0
.................................................................................................................................................CTTGTGGGTAGGGGAATCTCT..................................................................................... 21 3 6 0.17 1 0 1 0 0 0
...........................................................................GAGAGAGAGAGAGAGAGG.............................................................................................................................................................. 18 0 20 0.15 3 3 0 0 0 0
.................................................................................................................................................CTTGTGGGTACGGGAATCTC...................................................................................... 20 3 7 0.14 1 1 0 0 0 0
.................................................................................................................................................CTTGTGGGTATGGGAGTC........................................................................................ 18 2 7 0.14 1 0 1 0 0 0
..................................................................................................................................................TTGTGGGTATGGGACTCT....................................................................................... 18 2 8 0.13 1 0 1 0 0 0
.................................................................................................................................................CTTGTGGGTCGGGGATTCTC...................................................................................... 20 3 8 0.13 1 0 1 0 0 0
................................................................................................................................................CCTTGTGGGTATGGGAATC........................................................................................ 19 3 20 0.10 2 0 1 1 0 0
............................................................TGTGAGAGAGAGAGAGAGAGAGAGAGA.................................................................................................................................................................... 27 0 20 0.10 2 2 0 0 0 0
................................................................................................................................................CCTTGTAGGTAGGGGAATC........................................................................................ 19 3 10 0.10 1 1 0 0 0 0
.................................................................................................................................................CTTGTAGGTAGGGCAATCT....................................................................................... 19 3 11 0.09 1 1 0 0 0 0
.................................................................................................................................................CTTGTGGGTAAGGGAATCTC...................................................................................... 20 3 13 0.08 1 1 0 0 0 0
.................................................................................................................................................CTTGTGGGTAGGGGATTAT....................................................................................... 19 3 15 0.07 1 0 1 0 0 0
................................................................................................................................................TCTTGTGGGTAGGGGAGTC........................................................................................ 19 3 15 0.07 1 0 1 0 0 0
..................................................................................................................................................TTGTGGGTAGGGGATTCTTT..................................................................................... 20 3 16 0.06 1 0 1 0 0 0
.................................................................................................................................................CTTGCGGGTAGGGGATTCT....................................................................................... 19 3 16 0.06 1 0 1 0 0 0
.................................................................................................................................................CTCGTGGGTATGGGAATCT....................................................................................... 19 3 19 0.05 1 1 0 0 0 0
..............................................................TGAGAGAGAGAGAGAGAGA.......................................................................................................................................................................... 19 0 20 0.05 1 0 1 0 0 0
..................................................TGTGTGTGTGTGTGAGAGAG..................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0
.................................................................................................................................................CTTGTGGGTATGGCAATCT....................................................................................... 19 3 20 0.05 1 0 1 0 0 0
.............................................................................................................................................................................TAAGTCTTTTTTTTTGACGTA......................................................... 21 3 20 0.05 1 0 0 0 1 0
.................................................GTGTGTGTGTGTGTGAGA........................................................................................................................................................................................ 18 0 20 0.05 1 1 0 0 0 0
.................................................................................................................................................CTTGTGGGTATGGGAATCG....................................................................................... 19 3 20 0.05 1 0 1 0 0 0

Anti-sense strand reads

GAAAAAGTGTGGTTGTGGTCGGATCATCCGCGTGTGACGTCATCCTTCTCACACACACACACACTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTTACCCACTCGGTGATTTTGAAGTACACAAGGAAGACCGATATGGATGTTAGAACATCCATACCCTAAGAGATATTAATATGCAGAAACAAAAACAGCATAGAGGTCTTTAAACTTGGTTCGAACTAAGTCGCGATATAGTGTCCTCAGACGTATGT
**************************************************************************************************************************************************************...........................................************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_62:214708-214958 + dpe_1956 CTTTTTCACACCAACACCA----------------------GCCTAGTAGGCGCACACTGCAGTAGGA-AGAGTG--------------------TGTGTGTGT-------------GTGAG--AGA----------GAGAGAGAG--------------AGAGAGAGA--------------GAGAGGGAA-----------TGGGT----------G--------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCC-ACTA-------------------AAACTTCATGTGTTCCTTCTGGCTATA------------------------------------------------------CCTACAATCT-----------------------TGTAGGTA--TGGGATTCTCTATAATTATACGTCTTTGTTTTTGTCGTATC-TCCAGAAA-----------------------------------------------------------------------------------------------------------------------------TTTGAACCAAGCTTGATTCAGCG--CTATATCACAGGAGTCTGCATACA
dp5 XR_group6:8614068-8614359 - TTTCACACC---AACATCAGCTGTTTTA------TCT----CGCCGGAGGGCGCACACTGCACGAGGA-AGAGTG--------------------T--GTGTGC-------------GAGAG--AGA----GAGAGA------GTG--------------AGAGA--G----------------GGAGGACT-----------GG--C------------------------------------------------------------------------------------------------------------------------------GCTGGGGATTGC-------GT----------------------------AGCC-ACTG-------------------CAATTTTATTTCTTCATTCTGGCTATAATAAAGATCCGATCTGATCCGCGAT--------------------------------------------------------------------TA--GGCCATTCCCGACGATTCTACGA--TTGGTTTTCTCGTATC-TTCAAATTGTGGATGCAATATATTTCAGTCTTTTGTGCCTTTTCGT---------------------------------------------------------------------------------------------------------TAGTG--TGATATCAAAGGTGTCTGGATACA
droWil2 scf2_1100000004511:3820856-3821005 - G---------------------------CAAG--------------------------------AGAA-AGAGCA--------------------AAAG------------CAGAGTGGGAG--TGA----GAGA--------GAG------AAAAAG--AGGAAGAGG--------------GAAAGGGAA-----------AG--------------------------------------------------------------GTTGTTTTTAGCTTTAAGCGTAGCTTCACTTTTTT-------------------TATTCTCTATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTAGTTTTTT--T----TTATATAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATA-----TATTTTTCTTTTT
droVir3 scaffold_13052:685847-686043 + G---------------------------AGAG----------------------------------------------------------------------------------------AGAGAGA----GA--GA------GAG--------------AGGGA--G---------------------------AGGGAGAAAGAGTGAGAGAA----ATCAAAA-TCCCAGTGCCTACTAAAATGGAGTTAAATGAGAAAGAAAGGCTATCTTCGG------------------CACTCCGAAGACTATACCCTTGCAG--------------------------------------------ACCCAACCTTTTCATAAT-----------------------------------------------------------------------------------------------------------------------GCTTGTACTGCTTTGCCCGTATT----------TA--A----GCGGACAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAA-CAG---GCACTTCTGCA
droMoj3 scaffold_6482:485866-486051 - G---------------------------TACA-----------------------------------------------------------------TATGTGTATGAGAGCACAGCGATAA--AGA----GAGAGAGA----GAG--------------AGAGA--G-----------------------------------AGAGTAAG---------GCGAATACCGCACATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGTTAAAAAACAAAATCAATTT---------TTCGATTATTCTCG-----ATAAAAAAGT----------------------------------------------------------------------------TATCGAATTATCGAAAAA-----------------------------------------------------------------------------------------------------------------------------AATAAAGCAAACTCGTA-CTGCGTATGGTAC-TCACGAGTATGCATGCC
droGri2 scaffold_15112:118304-118461 + A---------------------------GGGA--------------------------------------GAGGGTGCAAATGTGCGAAAGAGGCAAGAG-----------------GAGAG--GGA----AAGA--GAGAGAGAA--------------GAGAAGGCT--------------GTCAGAGG--------------------------------------GTAAAACTGA--TATGTGTGGTCTG----------------------------------------ATTTTGTA-------------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTATATGTG------------TGTGTGTGTGTGTGA----CTATATAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATA-CTTAT-ATGTATGCGTT
droAna3 scaffold_13458:1375-1450 - G---------------------------ATAG----------------------------------------------------------------------------------------AGATAGA----CA--GA------CAG--------------AGAGA--G---------------------------ATCGCAAATGGGT----------G--------------------------------------------------------------------------------------------------------------------------------------------------------------------GTACAACTA-------------------GTTTTTGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT-ATTACATTTTGCTGGAC
droBip1 scf7180000392465:7278-7368 - CATGTTTAC-----------------------AC--------ACCAGAAATTGTAGCCCACAC----G-AGAGTG--------------------TGTGTTTGT-------------GTGGG--TGA----------GGGGGCGTT------GAAAGTATA----------------------GGTAGAGAA-----------TG----------G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGGG----------------------------------------------------------------
droKik1 scf7180000302724:42123-42245 + CCTGCTGGCAACGACGCCT----------------------CATTAGAAGGCCCAAGGTGCAGGAAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAATATTATAATTATTGTGATTCCGTCTTCTCAATAGAGAGAGAGAGAGGAAGAGAGAAGAGAGAGAAACACTAA----------------------------------------------------------------
droFic1 scf7180000453206:171731-171830 + A---------------------------GAGA--------------------------------------C--TG--------------------TCAGAGAGG-------------GAGAA--AGA----GAGAGA------GAG--------------AGAAA--G-AGAAAGCAGGAGTG--------------------------------GGGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTGAAGTTTCTTTTTGAAATAATAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTTATGCATT
droEle1 scf7180000491186:2845376-2845484 + G---------------------------TGAT--------------------------------------------------------------------------------------AGAGATTGACAGAGAGAGAGAGAGAGATAGAAGTTTGGAAAAG----------------------CATATAAACGAAATTACAAATCC----------------------------------------------------------------GTCCTAACCCTATCAATTATCCTATACTCTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAT-ACTT
droRho1 scf7180000759858:1164-1347 - G---------------------------TGCG----------------------------------------------------------------------------------------AG--GGA----------GATGGAGAT--------------AGAAATTTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------GATAGGTATTGATAAACACAATAAAACTGCATTTTTACTTTTCCGAAAT-----------------------------------------------------------------------------------------------------------------------ATTTAAATTTTTAAAATCGTATA----------TA--A----GCGA-------------------------------------------------------------TTGTGGGCGTTAAAG-----------------------------------------------------------------------GGGGCGTGGCACCATTTTGAAACAAACTTGCG-CTGCGTAGGAACT-CCTAGAATCTGCTTGGA
droBia1 scf7180000301757:39471-39609 - A---------------------------TTAA--------------------------------------A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTATATATATTTTCTCTTTCTA-----------------------------------TCATAAAAACTGTAGGCGCTACAGATTTT-----------------------TGAGGA------------------------------------------------------------------------------TTGTGGGCGTTAAAT-----------------------------------------------------------------------TGG-----GCACCTCGCTGAAACAAACTTGCG-CTGCACAGGAACCCCCAGCAATCTGCATGCC
droTak1 scf7180000415114:3052-3235 - G---------------------------GGAG---------------------------------------------------------------------TGC-------------GAGGG--AGA----TGGAGA------TAG--------------AGATA--G--------------------AAAA---------------------------CTTTGATCACGCATAACTTTTTAACGAATGGTCCGATTTGAAA-----AAT-------------------------------T-------------------TCTTCTACATTTCGATAGGTATTGATAAACACAATAAAACTGCATTTTTACTTTTCAAAAAT-----------------------------------------------------------------------------------------------------------------------ATTAAAATTTTTAAAATCGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACT-CCTAAAATCTGCATGCA
droEug1 scf7180000409886:234681-234804 - G---------------------------ATCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGACATCTCATGAGTTAATTCCAACTTTCTAGCTCTTATATTTCCTGAG----------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTCAGCGATTTTAGTTTTC-----------------------CGTAAT------------------------------------------------------------------------------TTGTGGGCGTTAGATTCTGCGG-----------------------------------------------------------------------------------------------------------ATC-TCGAGAATCTGTCTAC-
dm3 chrUextra:2567326-2567426 - CTGTCTTATATTACCGCA---------------A-------ACCCAAAAT--A-ACAATGCAGGACAG-AGAGAG--------------------AGAGAGA---------------GAGAG--AGA----GA----GAGAGAGAG------AGAGAGAGA----------------------GAGAGAGAG-----------AG----------A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAG----------------------------------------------------------------
droSim2 x:2470026-2470104 + A---------------------------GGGA--------------------------------------GATGG--------------------TGTGTGTGT-------------GAGAA--AGA----GAGAGA------GAG--------------AGAGA--G-AGAGCTAAGGAGTG--------------------------------GGAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G--AACGTG------------------------------------CC-ATTAAA--------TCT
droSec2 scaffold_10:860027-860098 + CACACGT------------------------------------------------------AGAGGGAACGAAGG--------------------AGGGG-----------------GCGAG--CGA----GAGA--GAGAGAGAG--------------AGAGAGACA--------------GATAGAGAT-----------AG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCGA----------------------------------------------------------------
droYak3 2L:3267236-3267338 + T---------------------------TCACACACCCGCCGCTTGGTAAACA-AAAGTGCAATA--A-ATATTA--------------------TATGTGTGT-------------GTGGG--TGG----TATGGC------CAG--------------CGGGA--C-GGAAAGTGGAAGTG--------------------------------GGCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTAA----------------------------------------------------------------
droEre2 scaffold_4929:22457103-22457227 + A---------------------------TTGC-----------------------------AGAGCGA-ACAGTG--------------------C--GAGTAC-------------AAGAC--AGA----TAGAGA------GAG--------------AGAGA--G-AGAATGCGGCA--------------------------------------A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTTAGGTACTCCCGCAGCTTCTC------------------------------------------------------TGCATATTTA-----------------------CGTAGA------------------------------------------------------------------------------TAAGGAACACTAT----------------------------------------------------------------------------------------------------------------------------AATTGCAC-ACCT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
CTTTTTCACACCAACACCA----------------------GCCTAGTAGGCGCACACTGCAGTAGGA-AGAGTG--------------------TGTGTGTGT-------------GTGAG--AGA----------GAGAGAGAG--------------AGAGAGAGA--------------GAGAGGGAA-----------TGGGT----------G--------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCC-ACTA-------------------AAACTTCATGTGTTCCTTCTGGCTATA------------------------------------------------------CCTACAATCT-----------------------TGTAGGTA--TGGGATTCTCTATAATTATACGTCTTTGTTTTTGTCGTATC-TCCAGAAA-----------------------------------------------------------------------------------------------------------------------------TTTGAACCAAGCTTGATTCAGCG--CTATATCACAGGAGTCTGCATACASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................................................................................................................................GAG--------------AGAGAGAGA--------------GAGAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.153000003
.......................................................................................................T-------------GTGAG--AGA----------GAGAGAGAG--------------AGAGAGAGA--------------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.102000002
......................................................................................................................TGAG--AGA----------GAGAGAGAG--------------AGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000010
.........................................................................TG--------------------TGTGTGTGT-------------GTGAG--AGA----------G.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000001
........................................................................GTG--------------------TGTGTGTGT-------------GTGAG--A..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000001
dp5
TTTCACACC---AACATCAGCTGTTTTA------TCT----CGCCGGAGGGCGCACACTGCACGAGGA-AGAGTG--------------------T--GTGTGC-------------GAGAG--AGA----GAGAGA------GTG--------------AGAGA--G----------------GGAGGACT-----------GG--C------------------------------------------------------------------------------------------------------------------------------GCTGGGGATTGC-------GT----------------------------AGCC-ACTG-------------------CAATTTTATTTCTTCATTCTGGCTATAATAAAGATCCGATCTGATCCGCGAT--------------------------------------------------------------------TA--GGCCATTCCCGACGATTCTACGA--TTGGTTTTCTCGTATC-TTCAAATTGTGGATGCAATATATTTCAGTCTTTTGTGCCTTTTCGT---------------------------------------------------------------------------------------------------------TAGTG--TGATATCAAAGGTGTCTGGATACASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGTATC-TTCAAATTGTGGATGC......................................................................................................................................................................2521.5030100000110
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGTATC-TTCAAATTGTGG..........................................................................................................................................................................2120.5010000000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGTATC-TTCAAATTGTGGATG.......................................................................................................................................................................2420.5010000000100
...................................................................A-AGAGTG--------------------T--GTGTGC-------------GAGAG--AG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.2510000010000
droWil2
G---------------------------CAAG--------------------------------AGAA-AGAGCA--------------------AAAG------------CAGAGTGGGAG--TGA----GAGA--------GAG------AAAAAG--AGGAAGAGG--------------GAAAGGGAA-----------AG--------------------------------------------------------------GTTGTTTTTAGCTTTAAGCGTAGCTTCACTTTTTT-------------------TATTCTCTATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTAGTTTTTT--T----TTATATAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATA-----TATTTTTCTTTTTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
G---------------------------AGAG----------------------------------------------------------------------------------------AGAGAGA----GA--GA------GAG--------------AGGGA--G---------------------------AGGGAGAAAGAGTGAGAGAA----ATCAAAA-TCCCAGTGCCTACTAAAATGGAGTTAAATGAGAAAGAAAGGCTATCTTCGG------------------CACTCCGAAGACTATACCCTTGCAG--------------------------------------------ACCCAACCTTTTCATAAT-----------------------------------------------------------------------------------------------------------------------GCTTGTACTGCTTTGCCCGTATT----------TA--A----GCGGACAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAA-CAG---GCACTTCTGCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................................................................................................................................................................................................................................................................................................................TACCCTTGCAG--------------------------------------------ACCCAACCTTTTCA............................................................................................................................................................................................................................................................................................................................................................................................25201.80360035000000000000000000000000010000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................TTCATAAT-----------------------------------------------------------------------------------------------------------------------GCTTGTACTGCTTTGCCC...............................................................................................................................................................................................................................................2611.001000000000000000000000000010000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................CTATACCCTTGCAG--------------------------------------------ACCCAACCTT................................................................................................................................................................................................................................................................................................................................................................................................2420.501000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................................TGAGAAAGAAAGGCTATCTTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.501000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................................AAATGAGAAAGAAAGGCTATCTTCGG------------------C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.501000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................CCCTTGCAG--------------------------------------------ACCCAACCTTTTCATAA.........................................................................................................................................................................................................................................................................................................................................................................................26200.102000000000000000000000000001000010000000000000000000000000000000
...................................................................................................................................................................................................................................................................AAAGAAAGGCTATCTTCGG------------------CA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................TTGCAG--------------------------------------------ACCCAACCTTTTCAT...........................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TACCCTTGCAG--------------------------------------------ACCCAACCTTTTCAT...........................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................CCTTGCAG--------------------------------------------ACCCAACCTTTTCATAAT-----------------------------------------------------------------------------------------------------------------------GC...............................................................................................................................................................................................................................................................28200.051000000000000000000000000000000000010000000000000000000000000000
G---------------------------AGAG----------------------------------------------------------------------------------------AGAGAGA----GA--GA------GAG--------------AGGGA--................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000000001000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TACCCTTGCAG--------------------------------------------ACCCAACCTTTTCATAA.........................................................................................................................................................................................................................................................................................................................................................................................28200.051000000000000000000000000000000100000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................CCTTGCAG--------------------------------------------ACCCAACCTTTTCAT...........................................................................................................................................................................................................................................................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
............................AGAG----------------------------------------------------------------------------------------AGAGAGA----GA--GA------GAG--------------AGGGA--G---------------------------A...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000100000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................GAGAAAGAAAGGCTATCTTCGG------------------CAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TGCAG--------------------------------------------ACCCAACCTTTTCATAAT-----------------------------------------------------------------------------------------------------------------------GC...............................................................................................................................................................................................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
droMoj3
G---------------------------TACA-----------------------------------------------------------------TATGTGTATGAGAGCACAGCGATAA--AGA----GAGAGAGA----GAG--------------AGAGA--G-----------------------------------AGAGTAAG---------GCGAATACCGCACATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGTTAAAAAACAAAATCAATTT---------TTCGATTATTCTCG-----ATAAAAAAGT----------------------------------------------------------------------------TATCGAATTATCGAAAAA-----------------------------------------------------------------------------------------------------------------------------AATAAAGCAAACTCGTA-CTGCGTATGGTAC-TCACGAGTATGCATGCCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................................................................................................................................................................................................AGAGTAAG---------GCGAATACCGCACATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T........................................................................................................................................................................................................................................................................................................................................2521.002200000
...............................................................................................................................................................................................................TAAG---------GCGAATACCGCACATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGTT....................................................................................................................................................................................................................................................................................................................................2511.001100000
...........................................................................................................................................................................................................AGAGTAAG---------GCGAATACCGCACATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG......................................................................................................................................................................................................................................................................................................................................2711.001000010
....................................................................................................GTGTATGAGAGCACAGCGATAA--AGA----G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
...........................................................................................................................................................................................................AGAGTAAG---------GCGAATACCGCACATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG.......................................................................................................................................................................................................................................................................................................................................2620.501010000
................................................................................................................................................................AGAGA--G-----------------------------------AGAGTAAG---------GCGAATACCGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.501000010
.................................................................................................................................................................GAGA--G-----------------------------------AGAGTAAG---------GCGAATACCGCAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.501010000
............................................................................................................................................................................................................GAGTAAG---------GCGAATACCGCACATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T........................................................................................................................................................................................................................................................................................................................................2420.501100000
...........................................................................................................................................................................................................AGAGTAAG---------GCGAATACCGCACATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........................................................................................................................................................................................................................................................................................................................................2420.501000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAACTCGTA-CTGCGTATGG.....................22200.102200000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTCG-----ATAAAAAAGT----------------------------------------------------------------------------TATC............................................................................................................................................................................................21200.102200000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATCGAAAAA-----------------------------------------------------------------------------------------------------------------------------AATAAAGCAAACTCG..................................26200.051100000
droGri2
A---------------------------GGGA--------------------------------------GAGGGTGCAAATGTGCGAAAGAGGCAAGAG-----------------GAGAG--GGA----AAGA--GAGAGAGAA--------------GAGAAGGCT--------------GTCAGAGG--------------------------------------GTAAAACTGA--TATGTGTGGTCTG----------------------------------------ATTTTGTA-------------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTATATGTG------------TGTGTGTGTGTGTGA----CTATATAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATA-CTTAT-ATGTATGCGTTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATGTG------------TGTGTGTGTGTGT.............................................................................................................................................................................................................................21200.05110
droAna3
G---------------------------ATAG----------------------------------------------------------------------------------------AGATAGA----CA--GA------CAG--------------AGAGA--G---------------------------ATCGCAAATGGGT----------G--------------------------------------------------------------------------------------------------------------------------------------------------------------------GTACAACTA-------------------GTTTTTGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT-ATTACATTTTGCTGGACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
CATGTTTAC-----------------------AC--------ACCAGAAATTGTAGCCCACAC----G-AGAGTG--------------------TGTGTTTGT-------------GTGGG--TGA----------GGGGGCGTT------GAAAGTATA----------------------GGTAGAGAA-----------TG----------G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGGG----------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
CCTGCTGGCAACGACGCCT----------------------CATTAGAAGGCCCAAGGTGCAGGAAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAATATTATAATTATTGTGATTCCGTCTTCTCAATAGAGAGAGAGAGAGGAAGAGAGAAGAGAGAGAAACACTAA----------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
A---------------------------GAGA--------------------------------------C--TG--------------------TCAGAGAGG-------------GAGAA--AGA----GAGAGA------GAG--------------AGAAA--G-AGAAAGCAGGAGTG--------------------------------GGGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTGAAGTTTCTTTTTGAAATAATAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTTATGCATTSizeHit CountTotal NormTotal
No Reads
droEle1
G---------------------------TGAT--------------------------------------------------------------------------------------AGAGATTGACAGAGAGAGAGAGAGAGATAGAAGTTTGGAAAAG----------------------CATATAAACGAAATTACAAATCC----------------------------------------------------------------GTCCTAACCCTATCAATTATCCTATACTCTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAT-ACTTSizeHit CountTotal NormTotal
No Reads
droRho1
G---------------------------TGCG----------------------------------------------------------------------------------------AG--GGA----------GATGGAGAT--------------AGAAATTTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------GATAGGTATTGATAAACACAATAAAACTGCATTTTTACTTTTCCGAAAT-----------------------------------------------------------------------------------------------------------------------ATTTAAATTTTTAAAATCGTATA----------TA--A----GCGA-------------------------------------------------------------TTGTGGGCGTTAAAG-----------------------------------------------------------------------GGGGCGTGGCACCATTTTGAAACAAACTTGCG-CTGCGTAGGAACT-CCTAGAATCTGCTTGGASizeHit CountTotal NormTotal
No Reads
droBia1
A---------------------------TTAA--------------------------------------A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTATATATATTTTCTCTTTCTA-----------------------------------TCATAAAAACTGTAGGCGCTACAGATTTT-----------------------TGAGGA------------------------------------------------------------------------------TTGTGGGCGTTAAAT-----------------------------------------------------------------------TGG-----GCACCTCGCTGAAACAAACTTGCG-CTGCACAGGAACCCCCAGCAATCTGCATGCCSizeHit CountTotal NormTotal
No Reads
droTak1
G---------------------------GGAG---------------------------------------------------------------------TGC-------------GAGGG--AGA----TGGAGA------TAG--------------AGATA--G--------------------AAAA---------------------------CTTTGATCACGCATAACTTTTTAACGAATGGTCCGATTTGAAA-----AAT-------------------------------T-------------------TCTTCTACATTTCGATAGGTATTGATAAACACAATAAAACTGCATTTTTACTTTTCAAAAAT-----------------------------------------------------------------------------------------------------------------------ATTAAAATTTTTAAAATCGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACT-CCTAAAATCTGCATGCASizeHit CountTotal NormTotal
No Reads
droEug1
G---------------------------ATCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGACATCTCATGAGTTAATTCCAACTTTCTAGCTCTTATATTTCCTGAG----------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTCAGCGATTTTAGTTTTC-----------------------CGTAAT------------------------------------------------------------------------------TTGTGGGCGTTAGATTCTGCGG-----------------------------------------------------------------------------------------------------------ATC-TCGAGAATCTGTCTAC-SizeHit CountTotal NormTotal
No Reads
dm3
CTGTCTTATATTACCGCA---------------A-------ACCCAAAAT--A-ACAATGCAGGACAG-AGAGAG--------------------AGAGAGA---------------GAGAG--AGA----GA----GAGAGAGAG------AGAGAGAGA----------------------GAGAGAGAG-----------AG----------A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAG----------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.................................................T--A-ACAATGCAGGACAG-AGAGAG--------------------AGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25207.15143000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142000000000
..............CGCA---------------A-------ACCCAAAAT--A-ACAATGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22205.80116000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................AAAT--A-ACAATGCAGGACAG-AG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21205.05101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008000000000000000002100000000000000000000000000000000000
............................................................CAGGACAG-AGAGAG--------------------AGAGAGA---------------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21204.258500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000500000000000000000000000000000000000000000000000000000000000000000000075000000000000000000000000000000000
..............CGCA---------------A-------ACCCAAAAT--A-ACAATGCAGGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27201.853700000000000000000000000000000000000000000000000000000000000370000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TGCAGGACAG-AGAGAG--------------------AGAGAGA---------------GA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25201.653300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000029000000
.........................................................................................................................................................GAGAGAGA----------------------GAGAGAGAG-----------A...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18201.503000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000
.............................................................................................................................................GAGAG------AGAGAGAGA----------------------GAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18201.503000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000
....................................................A-ACAATGCAGGACAG-AGAGAG--------------------A.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22201.503000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000
...........................................................................................................................................................GAGAGA----------------------GAGAGAGAG-----------AG----------A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.....................................................................18201.503000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000
...............................................................................................................................................GAG------AGAGAGAGA----------------------GAGAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18201.503000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000
.................................................................................................................................................G------AGAGAGAGA----------------------GAGAGAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18201.503000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000
......................................................ACAATGCAGGACAG-AGAGAG--------------------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20201.452900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000290000000000000000000000000000000000000000000000000000
........TATTACCGCA---------------A-------ACCCAAAAT--A-ACAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25201.202400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................ACAG-AGAGAG--------------------AGAGAGA---------------GA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19201.102200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000
..............CGCA---------------A-------ACCCAAAAT--A-ACAATGCAGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26201.10220000000000000000000000000000010000000020000000000000030000000000000000000000000000000190000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000
..........................................................TGCAGGACAG-AGAGAG--------------------AGAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.951900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000080000000000000000000001100000000000000000000000000000000000
..............CGCA---------------A-------ACCCAAAAT--A-ACAATGCAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.951900000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000010000000000000000000000000000000000
..........................................................TGCAGGACAG-AGAGAG--------------------AGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.901800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000180000000000000000000000000000000000000000000000000000
.........................................................ATGCAGGACAG-AGAGAG--------------------AGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.801600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000160000000000000000000000000000000000
.......................................................................AGAG--------------------AGAGAGA---------------GAGAG--AGA----GA----..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.751500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................CAG-AGAGAG--------------------AGAGAGA---------------GAGAG--AGA----....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.751500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001300000000000000000000000000000000000000000000000000000000000000000000000000001000000000001000000000000000000000000
.................................................T--A-ACAATGCAGGACAG-AGAGAG--------------------AG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.751500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................G--AGA----GA----GAGAGAGAG------AGAGAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.70140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008000000060000000000000000000000000
...............................................................GACAG-AGAGAG--------------------AGAGAGA---------------GA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.701400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001400000000
............................................................................................................................................AGAGAG------AGAGAGAGA----------------------GAGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.651300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................A----GAGAGAGAG------AGAGAGAGA----------------------G...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.651300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................AG--------------------AGAGAGA---------------GAGAG--AGA----GA----GAGAGAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.651300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021100000000000
..........................................................................................................................................AGAGAGAG------AGAGAGAGA----------------------GAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.651300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................CAATGCAGGACAG-AGAGAG--------------------AG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.60120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000040000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000
.....................................................................AGAGAG--------------------AGAGAGA---------------GAGAG--AGA----GA----GA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.55110000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000800000000000
......................................................................................................................AGAG--AGA----GA----GAGAGAGAG------AGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000800000000000000000
.........................................................................AG--------------------AGAGAGA---------------GAGAG--AGA----GA----..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008000000000000000
.......................................................................................................................GAG--AGA----GA----GAGAGAGAG------AGAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008000000000000000000000000000000000
........................................................................................................................AG--AGA----GA----GAGAGAGAG------AGAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000800000000000000000
.................................................................CAG-AGAGAG--------------------AGAGAGA---------------GAGAG--AGA----GA----..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.3570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000001000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................GA----GA----GAGAGAGAG------AGAGAGAGA----------------------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000
.........................................................................................................................................GAGAGAGAG------AGAGAGAGA----------------------GAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000
...............................................AAT--A-ACAATGCAGGACAG-AGAGAG--------------------A.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.3060000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000
.................................................T--A-ACAATGCAGGACAG-AGAGAG--------------------AGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................GA----GAGAGAGAG------AGAGAGAGA----------------------GA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000
.................................................T--A-ACAATGCAGGACAG-AGAGAA--------------------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000
.........................................................ATGCAGGACAG-AGAGAG--------------------AGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000
.................................................T--A-ACAATGCAGGACAG-AGAGAG--------------------AGAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TGCAGGACAG-AGAGAG--------------------AGAGAGA---------------G.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................AAT--A-ACAATGCAGGACAG-AGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................GACAG-AGAGAG--------------------AGAGAGA---------------GAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000
...................................................................................................AGA---------------GAGAG--AGA----GA----GAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CGCA---------------A-------ACCCAAAAT--A-ACAATGCAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................ACAATGCAGGACAG-AGAGAG--------------------AGAGAGA---------------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.................................................................................................................................................G------AGAGAGAGA----------------------GAGAGAGAG-----------AG----------A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC...................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................AG-AGAGAG--------------------AGAGAGA---------------GAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................A-ACAATGCAGGACAG-AGAGAG--------------------AGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................CAAAAT--A-ACAATGCAGGACAG-AGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................AT--A-ACAATGCAGGACAG-AGAGAA--------------------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..........................................................TGCAGGACAG-AGAGAG--------------------AGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................CAAAAT--A-ACAATGCAGGACAG-AGAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................G-AGAGAG--------------------AGAGAGA---------------GAGAG--AGA----GA----..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
..........................................................TGCAGGACAG-AGAGAG--------------------AGAGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................GCAGGACAG-AGAGAG--------------------AGAGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................ACCCAAAAT--A-ACAATGCAGGACAG-A.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................AGAG--AGA----GA----GAGAGAGAG------AGAGAGAGA----------------------G...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..............CGCA---------------A-------ACCCAAAAT--A-ACAATGCAGGAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............ACCGCA---------------A-------ACCCAAAAT--A-ACAATGCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
A---------------------------GGGA--------------------------------------GATGG--------------------TGTGTGTGT-------------GAGAA--AGA----GAGAGA------GAG--------------AGAGA--G-AGAGCTAAGGAGTG--------------------------------GGAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G--AACGTG------------------------------------CC-ATTAAA--------TCTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................................................................................................................................GAG--------------AGAGA--G-AGAGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15200.10200000000002000000
....................................................................................................................................AGAGA------GAG--------------AGAGA--G-AGAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100000000001000000
droSec2
CACACGT------------------------------------------------------AGAGGGAACGAAGG--------------------AGGGG-----------------GCGAG--CGA----GAGA--GAGAGAGAG--------------AGAGAGACA--------------GATAGAGAT-----------AG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCGA----------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
T---------------------------TCACACACCCGCCGCTTGGTAAACA-AAAGTGCAATA--A-ATATTA--------------------TATGTGTGT-------------GTGGG--TGG----TATGGC------CAG--------------CGGGA--C-GGAAAGTGGAAGTG--------------------------------GGCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTAA----------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
A---------------------------TTGC-----------------------------AGAGCGA-ACAGTG--------------------C--GAGTAC-------------AAGAC--AGA----TAGAGA------GAG--------------AGAGA--G-AGAATGCGGCA--------------------------------------A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTTAGGTACTCCCGCAGCTTCTC------------------------------------------------------TGCATATTTA-----------------------CGTAGA------------------------------------------------------------------------------TAAGGAACACTAT----------------------------------------------------------------------------------------------------------------------------AATTGCAC-ACCTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................GC-----------------------------AGAGCGA-ACAGTG--------------------C--GAGTAC-------------AAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000

Generated: 06/08/2015 at 04:58 PM