ID:

dpe_1947

 Coordinate:

scaffold_61:116427-116577 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-5.7 -5.0 -4.9

Flybase annnotation

CDS [Dper\GL16300-cds]; exon [dper_GLEANR_17950:4]; intron [Dper\GL16300-in]

Repeatable elements

NameClassFamilyStrand
(CTG)nSimple_repeatSimple_repeat+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TCTATCTCGAACATATATTCTCTCTCTTTCCACATCGTCTGTGTGTGTCGTTTACATCTCCCAACCAACCAACCACACACCCATCTACAACATCCTTAACACCCGTGATCGAAACCCAAATGCACCAACGAACCACCAAATGCACCATTGAACCAATAGCAGCCACAATACGGTAGCCAGCAGCAGCAGCAGCAGCCACAGCCACAGCCACAGTCTGTGGCACCTCAGTGGCAACAACAGCAGCCAGCTGC
********************************************************************************************************************...............................(((...........(((.......)))......)))******************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V042
embryo
 V050
head
 V111
male body
....................................................................................................................CAAATGCACCAACGAACCACC.................................................................................................................. 21 0 1 2.00 2 2 0 0 0
..............................................................................................................................................................GCAGCCACAATACGGTAGCCAGCAG.................................................................... 25 0 1 1.00 1 1 0 0 0
..................................TCGTCTGTGTGTGTCGTTTACA................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0
.................................................................................................................ACCCAAATGCACCAACGAACCACCAAA............................................................................................................... 27 0 1 1.00 1 1 0 0 0
.......................................................................................................................................................................ATACGGTAGCCAGCAGCAGC................................................................ 20 0 1 1.00 1 0 1 0 0
............................................................................................................................CCAACGAACCACCAAATGCACCATT...................................................................................................... 25 0 1 1.00 1 1 0 0 0
....................................GTCTGTGTGTGTCGTTTACATCTCCC............................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0
...........................TTCCACATCGTCTGTGTGTGTCGT........................................................................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0
.......................................................................................................................................................................ATACGGTAGCCAGCAGCAGCA............................................................... 21 0 1 1.00 1 0 0 0 1
...ATCTCGAACATATATTCTCTCTCT................................................................................................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0
.............................................................................................................................................................................................................AGCCACAGTCTGTGGCACCTCAGTGGC................... 27 0 1 1.00 1 1 0 0 0
.........................................................................................ACATCCTTAACACCCGTGATCGAA.......................................................................................................................................... 24 0 1 1.00 1 1 0 0 0
.............................................................................................................................CAACGAACCACCAAATGCACCA........................................................................................................ 22 0 1 1.00 1 1 0 0 0
........................................................................................................................TGCACCAACGAACCACCAAAT.............................................................................................................. 21 0 1 1.00 1 1 0 0 0
..................TCTCTCTCTTTCCACATCGTC.................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
...................................................................................................................................................TTGAACCAATAGCAGCCA...................................................................................... 18 0 1 1.00 1 1 0 0 0
.............................................................................................................................................GCACCATTGAACCAATAGC........................................................................................... 19 0 1 1.00 1 1 0 0 0
.................................................................................................................................................................GCCACAATACGGTAGCCAGCAGC................................................................... 23 0 1 1.00 1 1 0 0 0
....................................................................................................................................................................ACAATACGGTAGCCAGCAGCAGC................................................................ 23 0 1 1.00 1 1 0 0 0
..................................................................................................................................................................................................................................AGTGGCAACAACAGCAGCCAGCTG. 24 0 1 1.00 1 1 0 0 0
.......................................................................................................................ATGCACCAACGAACCACCA................................................................................................................. 19 0 1 1.00 1 1 0 0 0
..............................................................................................................................................................................AGCCAGCAGCAGCAGCAGC.......................................................... 19 0 20 0.05 1 1 0 0 0

Anti-sense strand reads

AGATAGAGCTTGTATATAAGAGAGAGAAAGGTGTAGCAGACACACACAGCAAATGTAGAGGGTTGGTTGGTTGGTGTGTGGGTAGATGTTGTAGGAATTGTGGGCACTAGCTTTGGGTTTACGTGGTTGCTTGGTGGTTTACGTGGTAACTTGGTTATCGTCGGTGTTATGCCATCGGTCGTCGTCGTCGTCGTCGGTGTCGGTGTCGGTGTCAGACACCGTGGAGTCACCGTTGTTGTCGTCGGTCGACG
********************************************************************...............................(((...........(((.......)))......)))******************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V057
head
 V111
male body		 V050
head
 V042
embryo
 M042
female body
..............................................................TTGGTTGATTGGTGTGAGGGT........................................................................................................................................................................ 21 2 2 2.00 4 4 0 0 0 0
..............................................................TTGGTTGATTGGTGTGTCGGT........................................................................................................................................................................ 21 2 3 2.00 6 6 0 0 0 0
..............................................................TTGGTCGGTTGGTGTGAGGGT........................................................................................................................................................................ 21 2 2 2.00 4 4 0 0 0 0
..............................................................TTGGTTGGTTGGTGTGACGGT........................................................................................................................................................................ 21 2 4 1.50 6 3 1 2 0 0
..............................................................TTGGTTGTTTGGTGTGTCGGT........................................................................................................................................................................ 21 2 2 1.50 3 2 0 1 0 0
..............................................................TTGGTCGATTGGTGTGTGGGT........................................................................................................................................................................ 21 2 2 1.50 3 2 0 1 0 0
..............................................................TTGGTCGGTTGGTGTGGGGGT........................................................................................................................................................................ 21 2 1 1.00 1 1 0 0 0 0
..........................................................AGGGTGGGTTGGTTGGTG............................................................................................................................................................................... 18 1 1 1.00 1 0 1 0 0 0
..............................................................TTGGTTGGTTGGTGTGCGGGT........................................................................................................................................................................ 21 1 1 1.00 1 1 0 0 0 0
.............................................................GTTGGTCGATTGGTGTGTGGGT........................................................................................................................................................................ 22 2 2 1.00 2 0 2 0 0 0
.............................................................GTTGGTCGGTTGGTGTGGGGGT........................................................................................................................................................................ 22 2 1 1.00 1 1 0 0 0 0
...............................................................TGGTCGGTTGGTGTGGGGGT........................................................................................................................................................................ 20 2 2 1.00 2 2 0 0 0 0
..............................................................TTGGTCGGTTGGTGTGCGGGT........................................................................................................................................................................ 21 2 1 1.00 1 1 0 0 0 0
.............................................................GCTGGTTGGTTGGTGTGAGGGT........................................................................................................................................................................ 22 2 1 1.00 1 1 0 0 0 0
.......................................................TATAGGGTTGGTTGGAGGGTGT.............................................................................................................................................................................. 22 3 1 1.00 1 0 1 0 0 0
................................................................GGTTGGTTGGTGTGAGGGT........................................................................................................................................................................ 19 1 1 1.00 1 1 0 0 0 0
..............................................................TTGGTTGGTTGGTGTGGGGGT........................................................................................................................................................................ 21 1 1 1.00 1 1 0 0 0 0
..............................................................TTGGTCGCTTGGTGTGTGGGT........................................................................................................................................................................ 21 2 1 1.00 1 1 0 0 0 0
.............................................................GTTGGTTGATTGGTGTGTCGGT........................................................................................................................................................................ 22 2 3 1.00 3 2 0 1 0 0
......................................................................TTGGTGTGTGGGAAGATGGAGT............................................................................................................................................................... 22 3 1 1.00 1 1 0 0 0 0
.............................................................GTTTGTTGGTTGGTGTGAGGGT........................................................................................................................................................................ 22 2 1 1.00 1 1 0 0 0 0
...............................................................TGGTCGGTTGGTGTGAGGGT........................................................................................................................................................................ 20 2 3 1.00 3 3 0 0 0 0
.............................................................GTTGGTTGGTTGGTGTGACGGT........................................................................................................................................................................ 22 2 3 0.67 2 1 0 1 0 0
.............................................................GTTGTTAGGTTGGTGTGGGGGT........................................................................................................................................................................ 22 3 2 0.50 1 1 0 0 0 0
...........................................................GCGTTGGTTGATTGGTGTGAGGGT........................................................................................................................................................................ 24 3 2 0.50 1 1 0 0 0 0
..............................................................TTGGTCGGTTGGTGTGGGGGC........................................................................................................................................................................ 21 3 4 0.50 2 2 0 0 0 0
....................................................................................................................................GGTGGTTTTAGTGGTAAGTTGGT................................................................................................ 23 3 2 0.50 1 1 0 0 0 0
...........................................................GTGTTGGTTGATTGGTGTGGGGGT........................................................................................................................................................................ 24 3 2 0.50 1 1 0 0 0 0
..............................................................TTGGTTGGTTGGTGTGAGGGA........................................................................................................................................................................ 21 2 2 0.50 1 1 0 0 0 0
..............................................................TTGGTTGGTTGGTGTGTAGGT........................................................................................................................................................................ 21 1 2 0.50 1 0 0 1 0 0
...........................................................GTGTTGGTTGTTTGGTGTGTCGGT........................................................................................................................................................................ 24 3 2 0.50 1 1 0 0 0 0
...............................................................TGGTTGGTTGGTGTGTCGGT........................................................................................................................................................................ 20 1 3 0.33 1 0 0 1 0 0
.............................................................GTTGGTTGGTTGGTGCGAGGGT........................................................................................................................................................................ 22 2 3 0.33 1 1 0 0 0 0
...............................................................TGGTTGGTTGGTGTGACGGT........................................................................................................................................................................ 20 2 6 0.33 2 2 0 0 0 0
.............................................................GTTGGTAGATTGGTGTGCGGGT........................................................................................................................................................................ 22 3 3 0.33 1 0 0 1 0 0
.................................................................GTTGGTTGGTATGTGGGTAT...................................................................................................................................................................... 20 2 3 0.33 1 0 0 0 1 0
..............................................................TTGGTCGTTTGGTGTGGGGGT........................................................................................................................................................................ 21 3 9 0.33 3 3 0 0 0 0
...............................................................TGGTCGCTTGGTGTGTGGGT........................................................................................................................................................................ 20 2 3 0.33 1 1 0 0 0 0
................TAAGAGAAAGAAATGTGTAG....................................................................................................................................................................................................................... 20 2 3 0.33 1 0 1 0 0 0
..............................................................TTGGTGGGTTGGTGTGAGGGT........................................................................................................................................................................ 21 2 7 0.29 2 2 0 0 0 0
..............................................................TTGGTCGCTTGGTGTGTGGGC........................................................................................................................................................................ 21 3 7 0.29 2 2 0 0 0 0
..............................................................TTGGTTGCTTGGTGCGAGGGT........................................................................................................................................................................ 21 3 7 0.29 2 1 0 1 0 0
..............................................................TTGTTCGGTTGGTGTGGGGGT........................................................................................................................................................................ 21 3 7 0.29 2 2 0 0 0 0
..............................................................TTGGTCGGTTGGTGTGGGGGA........................................................................................................................................................................ 21 3 7 0.29 2 2 0 0 0 0
..............................................................TTGGTGGCTTGGTGTGAGGGT........................................................................................................................................................................ 21 3 15 0.27 4 3 0 1 0 0
.............................................................GTTGGTCGCTTGGTGTGGGGGT........................................................................................................................................................................ 22 3 4 0.25 1 1 0 0 0 0
...............................................................TGGTTGATTGGTGTGTCGGT........................................................................................................................................................................ 20 2 4 0.25 1 1 0 0 0 0
.............................................................GTTGGTTGATTGGTGTGAGGGG........................................................................................................................................................................ 22 3 4 0.25 1 1 0 0 0 0
.............................................................GTTGGTTGATTGGTGCGCGGGT........................................................................................................................................................................ 22 3 4 0.25 1 1 0 0 0 0
.............................................................GTTGGTCGGTTGGTGTGGGGGA........................................................................................................................................................................ 22 3 4 0.25 1 1 0 0 0 0
..............................................................TTGGTAGATTGGTGTGGGGGT........................................................................................................................................................................ 21 3 4 0.25 1 1 0 0 0 0
..............................................................TTGGTCGGTTGGTGTGAGGGA........................................................................................................................................................................ 21 3 9 0.22 2 2 0 0 0 0
.............................................................GTTGCTTAGTTGGTGTGTCGGT........................................................................................................................................................................ 22 3 5 0.20 1 1 0 0 0 0
.............................................................GTTGGTTGTTTGGTGTGGCGGT........................................................................................................................................................................ 22 3 5 0.20 1 1 0 0 0 0
.............................................................GTTGGTCGTTTGGTGTGGGGGT........................................................................................................................................................................ 22 3 5 0.20 1 1 0 0 0 0
..............................................................TTGGTCGCTTGGTGTGGGGGT........................................................................................................................................................................ 21 3 5 0.20 1 1 0 0 0 0
...........................................................GTGTTGGTTGGTTGGGGTG............................................................................................................................................................................. 19 2 11 0.18 2 0 2 0 0 0
............................................................................TGTGGGTAGATGGTATAG............................................................................................................................................................. 18 2 11 0.18 2 0 2 0 0 0
..............................................................TTGGTTGGTTGATGTGACGGT........................................................................................................................................................................ 21 3 11 0.18 2 2 0 0 0 0
...............................................................TGGTTGGTTGGTGTGGCGGT........................................................................................................................................................................ 20 2 6 0.17 1 1 0 0 0 0
..............................................................TTGGTCGGGTGGTGTGAGGGT........................................................................................................................................................................ 21 3 6 0.17 1 1 0 0 0 0
.............................................................GTTGGTCGGTTGGCGTGGGGGT........................................................................................................................................................................ 22 3 6 0.17 1 1 0 0 0 0
..............................................................TTGGGTGATTGGTGTGTCGGT........................................................................................................................................................................ 21 3 12 0.17 2 2 0 0 0 0
..............................................................TGGGTTGGTTGGTGTGAGGG......................................................................................................................................................................... 20 2 6 0.17 1 1 0 0 0 0
..............................................................TTGGTTGGTTGGTGTGCAGGT........................................................................................................................................................................ 21 2 6 0.17 1 1 0 0 0 0
.............................................................GTGGGTTGGTTGGTGTGACGGT........................................................................................................................................................................ 22 3 13 0.15 2 2 0 0 0 0
..............................................................TGGGTTGGTTGGTGTGACGGT........................................................................................................................................................................ 21 3 20 0.15 3 3 0 0 0 0
..............................................................TTGGTTGGTGGGTGTGAGGGT........................................................................................................................................................................ 21 2 7 0.14 1 1 0 0 0 0
..............................................................TTGGTGGATTGGTGTGTGGGT........................................................................................................................................................................ 21 2 7 0.14 1 1 0 0 0 0
..............................................................TGGGTTGATTGGTGTGCGGGT........................................................................................................................................................................ 21 3 7 0.14 1 1 0 0 0 0
.............................................................GTTGGTTCGTTGGTGTGACGGT........................................................................................................................................................................ 22 3 7 0.14 1 1 0 0 0 0
..............................................................TTGTTAGGTTGGTGTGGGGGT........................................................................................................................................................................ 21 3 7 0.14 1 1 0 0 0 0
.............................................................GTTGGTCGGTTGGTGTGTCGGT........................................................................................................................................................................ 22 2 15 0.13 2 2 0 0 0 0
..............................................................TTGGTCGCTTGGTGCGTGGGT........................................................................................................................................................................ 21 3 16 0.13 2 2 0 0 0 0
..............................................................TTGGTGGCTTGGTGTGTGGGT........................................................................................................................................................................ 21 2 8 0.13 1 1 0 0 0 0
.............................................................GTTGGTGGCTTGGTGTGAGGGT........................................................................................................................................................................ 22 3 8 0.13 1 1 0 0 0 0
...........................................................GGGTTGGTCGGTGGGTGTGGGGGT........................................................................................................................................................................ 24 3 8 0.13 1 1 0 0 0 0
.............................................................GTTGTTTGATTGGTGTGTCGGT........................................................................................................................................................................ 22 3 9 0.11 1 1 0 0 0 0
..............................................................TTGGTTGTTTGGTGTGAGGGT........................................................................................................................................................................ 21 2 9 0.11 1 1 0 0 0 0
................................................................GGTTGGTTGGTGTGGCGGT........................................................................................................................................................................ 19 2 9 0.11 1 1 0 0 0 0
.............................................................GTTGGTCGCTTGGTGCGTGGGT........................................................................................................................................................................ 22 3 9 0.11 1 1 0 0 0 0
....................................................................................GATGTTGGAGGAACTGTAG.................................................................................................................................................... 19 3 20 0.10 2 0 2 0 0 0
.............................................................GTTGGTTGGTTGGTGTGATGGG........................................................................................................................................................................ 22 3 10 0.10 1 1 0 0 0 0
..............................................................TTGTTTGGTTGGTGTGGCGGT........................................................................................................................................................................ 21 3 10 0.10 1 1 0 0 0 0
.............................................................GTTGGTTGATGGGTGTGAGGGT........................................................................................................................................................................ 22 3 10 0.10 1 1 0 0 0 0
.............................................................GTTGGTCGATTGGTGCGTGGGT........................................................................................................................................................................ 22 3 10 0.10 1 1 0 0 0 0
..............................................................TTGTTCGCTTGGTGTGTGGGT........................................................................................................................................................................ 21 3 11 0.09 1 0 0 1 0 0
....................................................................GGTTTGCGTGTGGGTAGA..................................................................................................................................................................... 18 2 11 0.09 1 0 0 0 1 0
..............................................................TTGGTTAGTTGGTGTGACGGT........................................................................................................................................................................ 21 3 11 0.09 1 1 0 0 0 0
...................................................................TGGTTGTTGTGTGGGTAGGTGTG................................................................................................................................................................. 23 3 11 0.09 1 0 0 0 0 1
..............................................................CTGGTAGTTTGGTGTGTGGGT........................................................................................................................................................................ 21 3 12 0.08 1 1 0 0 0 0
..............................................................TTGGTCGGTCGGTGTGTGGGT........................................................................................................................................................................ 21 2 12 0.08 1 1 0 0 0 0
..............................................................TTGGTCGGTTGGTGTGCGGGA........................................................................................................................................................................ 21 3 12 0.08 1 1 0 0 0 0
..............................................................TTGGTCGATTGGTGCGTGGGT........................................................................................................................................................................ 21 3 12 0.08 1 1 0 0 0 0
..............................................................TTGGTCGGTTGGGGTGTAGGT........................................................................................................................................................................ 21 3 12 0.08 1 1 0 0 0 0
..............................................................TTGGTTGTTTGGTGTGGCGGT........................................................................................................................................................................ 21 3 12 0.08 1 0 0 1 0 0
.............................................................TTTGGTTGGTTGGTGTGACGGT........................................................................................................................................................................ 22 3 12 0.08 1 1 0 0 0 0
..............................................................TTGGTCGGTTGGGGTGAGGGT........................................................................................................................................................................ 21 3 13 0.08 1 1 0 0 0 0
..............................................................TGGGTTGATTGGTGTGAGGGT........................................................................................................................................................................ 21 3 13 0.08 1 0 0 1 0 0
..............................................................TTGGTTGGTTGGGGTGCAGGT........................................................................................................................................................................ 21 3 13 0.08 1 0 0 1 0 0
..................................................................TTGGTCGGTGTGGGGGAAGAT.................................................................................................................................................................... 21 3 13 0.08 1 1 0 0 0 0
..............................................................TTGGGCGGTTGGTGTGGGGGT........................................................................................................................................................................ 21 3 15 0.07 1 1 0 0 0 0
...............................................................TGGCTGGTTGGTGTGAAGGT........................................................................................................................................................................ 20 3 16 0.06 1 1 0 0 0 0
..............................................................TTGGTTGGTTTGTGTGACGGT........................................................................................................................................................................ 21 3 16 0.06 1 1 0 0 0 0
..............................................................TTGGTGGATTGGTGTGCGGGT........................................................................................................................................................................ 21 3 16 0.06 1 1 0 0 0 0
..............................................................TTGGTGGATTGGTGTGGGGGT........................................................................................................................................................................ 21 3 17 0.06 1 1 0 0 0 0
..........................................................AGGGTTGGTAGGGTGGAGTG............................................................................................................................................................................. 20 3 17 0.06 1 0 1 0 0 0
..............................................................TTGGTAGTTTGGTGTGTCGGT........................................................................................................................................................................ 21 3 17 0.06 1 0 0 1 0 0
.............................................................GTTGGTCGGTTGGGGTGGGGGT........................................................................................................................................................................ 22 3 18 0.06 1 1 0 0 0 0
..............................................................TGGGTTGATTGGTGTGTCGGT........................................................................................................................................................................ 21 3 18 0.06 1 1 0 0 0 0
..............................................................TTGGTCGGTTGGTGTGTCGGT........................................................................................................................................................................ 21 2 19 0.05 1 0 0 1 0 0
..............................................................TTGGTCGGTTGGTGTTGGGGT........................................................................................................................................................................ 21 3 20 0.05 1 1 0 0 0 0
.............................................................GTTCGTAGGTTGGTGTGTCGGT........................................................................................................................................................................ 22 3 20 0.05 1 1 0 0 0 0
..............................................................TTGGTTGATCGGTGTGTCGGT........................................................................................................................................................................ 21 3 20 0.05 1 1 0 0 0 0
..............................................................TTGGTAGGTTGGGGTGTCGGT........................................................................................................................................................................ 21 3 20 0.05 1 1 0 0 0 0
.............................................................GTTGGTCGGTTGGTTTGGGGGT........................................................................................................................................................................ 22 3 20 0.05 1 1 0 0 0 0
.............................................................GTTGGTTGGTCGGTGTGACGGT........................................................................................................................................................................ 22 3 20 0.05 1 1 0 0 0 0
..............................................................TTGGTCGATCGGTGTGTGGGT........................................................................................................................................................................ 21 3 20 0.05 1 1 0 0 0 0
.............................................................GTTGGTAGGTTGGTGTGTTGGT........................................................................................................................................................................ 22 2 20 0.05 1 1 0 0 0 0
............................................................GGCTGGTTGGTTGGTGTTTA........................................................................................................................................................................... 20 3 20 0.05 1 1 0 0 0 0
................................................................GGTTGGTTGGTGTGGCGGA........................................................................................................................................................................ 19 3 20 0.05 1 1 0 0 0 0
....................................................................................................................................GGCGGTTCACGTGGCAACT.................................................................................................... 19 3 20 0.05 1 0 0 0 0 1
................................................................AGATGGGTGGTGTGTGGGTA....................................................................................................................................................................... 20 3 20 0.05 1 0 0 0 1 0
..............................................................TCGGTTGGTTGGTGTGGCGGT........................................................................................................................................................................ 21 3 20 0.05 1 0 0 1 0 0
..............................................................TTGGTTGATGGGTGTGTCGGT........................................................................................................................................................................ 21 3 20 0.05 1 1 0 0 0 0
..............................................................TTGGTTGATTGGTGCGTCGGT........................................................................................................................................................................ 21 3 20 0.05 1 0 0 1 0 0
................................................................GGTAGGTTGGTGTGGGGGT........................................................................................................................................................................ 19 2 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_61:116377-116627 - dpe_1947 TCT-----ATCTCGAACATATAT--TCTCT-CTCTTTCCACATC----G---------------------------------------TCTGTG--------------------------TGTGTC--------------GTTT-ACATCTCCCAA-------------------CCAAC--------------CAA----CCAC---ACACCCATCTA-CAACATC-----------CTTAA-CACCCGT---GATCG-------AAAC-CCAAA---------TG--------CACCAACGAA---------------CCACCA---------AATGCACCATTGAAC---------------------------------------CA---ATAGCAGCC------------ACAATACGGTAGCCAGCAGCAGCA-------GCA--------------GCA---GCCACAGCCACAG---CCACAGTCTGTGGCACCT------------------------------------------------------CAGTGGCAACAACAGCAGCCAGCTGC
dp5 XR_group6:9837372-9837611 - dps_3128 TCT-----ATCTCGAACATATAT--TCTCT-CTCTTTCCACATC----G---------------------------------------TCTGTG--------------------------TGTGTC--------------GTTT-ACACCTCCCAA-------------------CCAAC--------------CAACCA---ACCACACACCCATCTA-CAACATC-----------CTTAA-CACCCGT---GATCG-------AAAC-CCAAA---------TG--------CACCAACGAA---------------CCACCA---------A----------------------------------------------------------------------------------A--TGCACTATTGAA-------------CC-----------------A---A------TAGCAG---CCACAATACGGT------------------------AGCCAGCAGCAGCCACAGTCACAGTCTGTGGCACCTCAGTGGCAACAACAGCAGCCAGCTGC
droWil2 scf2_1100000004762:1070931-1071215 - dwi_1975 TCT-----CCCTCTA-TATATA----------------TATATA----TAAATTTATTATTCCTCGATCTAAATCTCTTTGCACTATCCGTGTGTA------------------------TGTGTG----TGTGTATATTGTTTTGCACCTTCCTC-------TCCAAAAAACAACCAA--------------------------------ACCATAAATCAACAT----C-------CATAAATTTCTGT---GACCT------------------------CATGCATGTTTGCACCAAAAGC----------------CACCTC-AACATCA---------------ACA-----------------------ACAACAACA---------------------------------------ACCACCACA-------------ACA--------------GCA---GCCACCACAACAA---CAACAATATGGTGCACCATCATACAA---------CAATTATCAACAACA------------------------------ACCACAGCAG-CAGCAGC
droVir3 scaffold_13042:2675581-2675804 + ATT-----TAGTGCATTTATCTC--TCTCTTTCTCTCCTTCTCT----C---------------------------------------TGTGTGTATCTCTCTCCTCTCCCTTATTATTGTTTAT-------------------------TTACAATTGACCAGA----------TCAAC--------------GGCGGAGCCAG----CGGCG--------------------------------CC---------------------------------AATGCGAATGCTAATGCGAGC---------------------GCA---------AATGCAGCGCAGCAG---------------------------------------CA---GCAGCAGCAGCAGCAGCAGCTACAA------CAGCAGCAGCA---------------------------ACAGCAG---CAGC---AGCAGCTACAA-----------------CAACAGCAACA---------------------------------------------------------------A
droMoj3 scaffold_6680:6712328-6712549 + dmo_2389 TGT-----CTCTCTTATCTCTCT--TTACT-------------CCGGTG------------------------TCTGTTTACTCTG--TTTGTT--------------------------TGTGTAAATGTTTAACT---GT-T-GCACTTG-CAC-------------------CCAA--------------------------------ACCACCAA-CAACAT----C-------CATAA-CCTCTGTCTCGATTGGCACCTGAAACACCATGACT--CGCATGCA-----ACACCACTGAA----------------TACCACC-------A-----------------------------------------------------------------------------------------------CA------------------------------GCA---GCAACCACCACAG---CAACAATATGGTGCACCGTCCTACAA---------CAACTACCAG-------------------------------------------------CAGC
droGri2 scaffold_15110:15546042-15546207 + TAC-----AA-----------------------------------------------------------------------------------------------------------------------------------------------CAA-------------------CCAAC--------------CATGCAACAAC----CGCCCATACA-AC-----AAAC-------AACA---AC-------------------------------------------------ACAACA---------------------GCA---------AAT--------------------------------------TCTTCAGCAACATCACTTGCAGCAGCTGCATCAGCAGCAACAATTCGCTCAACAGCAGCA---------------------------GCAGCAG---CAAC---AGCAGCAACAA-----------------CAACAACAACA----------GTTCCT---------------------------------------TCCAAATGT
droAna3 scaffold_13117:3453054-3453294 + TCT-----ATCTA--------TC--TATCT-CTCTTTCTCTCTCCCTTG------------------------TCTCCC---------AAAATTAT----------------------TGTTTATT--------------GTAT-ATATTTTGCAATTGCCCAGA----------TCAA--------------------------------------------------------------------------------------------------------------------CGGCAGCGGA---------------GTTGCA---------ACTGCACCGCAGCAA---------------------------------------CA---GTCGCAGTCGCAGCAGCAACAGCAA------CAGCAGCAGCAACAGCAATCGCAGCTAGTAGGGC---AGCAGCAG---CAGC---AGCAGCAACAA-----------------CAACAGTCACAACAA-CAGCAGCAACA------------------------------ATCGCAGCAG-CAACAGC
droBip1 scf7180000396387:58298-58522 + TCT-----ATTTCCAACATATAT-CTATAT-CTATGTCTACATC----A---------------------------------------AATGTGAA------------------------TGTGTT--------------GTTTCGCACCCAC----------------------CCGACAAAATCGACAAAAACAA----ACAC----CATCCATCTA-CAA--TTAAATAAAAACCCATTA-CACCTGT---GATCG-------C---------------ACATGCATGTTGGCACCACC-----------------------------------------------------------------------------------------------------------------------------ACCGAT-------------CCACCG-------------A---G------TAGCAG---CAGCAATACGGTGCTCCATCCTACGG---------TGGCTACCAACAGCAACAG------C---------------------------------CTGC
droKik1 scf7180000302486:2417025-2417249 + TATTCTCGATTTCCAACATACTCTCTATCT-CTCCGTCTACATC----C---------------------------------------AATGTG-----------------------------------------------TAT-GCACCTCCCC---------------------------------------AAC----GCAC----CATAAATCTA-TGTACTCAAAC-------CATA---ACCTGT---GATCG-------AAAA-CCATGACACCACCATGCA--CTCGCACCACCCGAA--------------ACAC--------------------------------------------------------------------------------------------------------CTGAA-------------CCTCCGATCGA------GCA---G------CAGCAG---CAGCAGTACGGTGCTCCGTCTTACGA---------TGGCTACCAGCAACA---G------C---------------------CAC-------CGCAGC
droFic1 scf7180000453807:985103-985357 + TCT-----ATTTTCAACATATTC--TATCT-GTCTGTCTACATC----C---------------------------------------ACTGTGAA------------------------TGTGTT--------------GTAC-GCACCTCCCAA-------------------CCAAC--------------CAA----ACAA----TATCCATCAA-TGAATTCAAATCACGAC-CATA---ACCTGT---GATCG-------AAAC-CCATGACA--AACACGCATGCTGGCACCACCGAA---------------CCAC---------------------------------------------------------------------------------------TCAACTAC--TGCACCACAAAA-------------CCACCGATTGAGTAACAGCA---G------CAGCAG---CAGCAGTACGGTGCTCCTTCCTACGA---------TGGCTACCAGCAGCAGCAG------CC----------------------------------G-
droEle1 scf7180000490564:621501-621759 + TCT-----ATCTCCAACATATTC--TATCT-GTCTATCTACATC----C---------------------------------------ACTGTGAA------------------------TGTGTT--------------GTAT-GCACCTCCCAA-------------------CCAAT--------------AAA----ACAC----CACC--------------ATAC-------CATA---ACTTGT---GATCG-------AAAC-CCATGTCA--AACATGCATGTTGGCACCACCGAA---------------ACACCACC-------A----------------------------------------------------------------------------------A--TGCACCACTGCA-------------CCACCGGTCGAAT------A---G------CAGCAG---CAGCAGTACGGTGCTCCGTCTTACGA---------TGGCCAGCAGCAGCAGCAA------CCTGCAACA---CCGTGGCAACAGCAGCAA-CAGCAAC
droRho1 scf7180000776514:22090-22348 + TCT-----ATCTCCAACATATTC--TATCT-GTCTGTGTACATC----C---------------------------------------ACTGTGAA------------------------TGTGTC--------------GAAT-GCACCTCCCAA-------------------CCAAT--------------AAA----ACAC----CACCCATCTA-TGAAATCAAAC-------CATA---ACCTGT---GATCG-------AAAC-CCATGTCG--AACATGCATGTTGGCACCACCGAA----------------CACCACC-------A--------------------------------------------------------------------------ATGCACCAA--TGTACCACTGCA-------------CCACCGATTGAAT---AGCA---G------CAGCAG---CAGCAGTACGGTGCTCCGTCTTACGA---------TGGCCAGCAGCAGCAACAG------C---------------------------AACCTGCAGC
droBia1 scf7180000302428:7943911-7944133 - TCT-----ATCTCCAACATATTC--TATCT-GTCTGTCTACATC----C---------------------------------------AATGTGAA------------------------TGTGTC--------------GTAC-GCACCTCCCAA-------------------CCAAC--------------AAC----ACAC----CACCCATCTT-CGAAATCACAC-------CATA---CCCTGT---GGTCG-------AAAC-CCATGACA--AACATGCATGCTGGCACCACCAAA----------------CACCAAC-------G----------------------------------------------------------------------------------A--C-CATCACTG----------------------------------A---G------CAGCAG---CAGCAGTACGGTGCTCCTTCCTACGA---------CGGCTACCAGCAGCAACAG------CC------------------------------------
droTak1 scf7180000414372:10256-10480 - TCT-----ATCTCCAACATATTC--TATCT-GTCTGTCTACATC----C---------------------------------------AATGTGAA------------------------TGTGTC--------------GTAT-GCACCTCCCAA-------------------CCAAC--------------AAAACAAACAC----CACCCATCAA-TGAAATCAAAC-------CATA---ACCTGT---GATCG-------AAAC-CCATGACA--AACATGCATGTTGGCACCACCAAA----------------AACC------------------------------------------------------------------------------------------------------ACTGCA-------------CCACCGGTTGAAC---AGCA---G------CAGCAG---CAGCAGTACGGTGCTCCGTCTTACGA---------TGGCCACCAG----------------------------------------------------C
droEug1 scf7180000409711:1681851-1682082 + TCT-----ATTTCCAACATATTC--TCTCT-GTCTATCTACATC----C---------------------------------------AATGTGAA------------------------TGTGTC--------------GTAT-AAACCTTCCAA-------------------CCAAC--------------AAA----ACAC----CATCCATCAA-TGAAATCAAAC-------CATA---ACCTGT---GATCG-------AAAC-CCATGACA--AACATGCATGTTGGCACCACCGAA----------------CACCACC-------A--------------------------------------------------------------------------------------------ATGCA-------------CCACCGATTGAAT---AGCA---A------CAGCAG---CAGCAGTACGGTGCTCCGTCTTACGG---------TAGTCAACAGCAGCAACCG--------------------------------------------
dm3 chr3L:9825101-9825315 + TCT-----ATCTCCAACATATTC--TATCAATTCTATCTACATC----C---------------------------------------AATGTGAA------------------------TGTGTC--------------GTAT-GCACCTCCCAA-------------------CCAAC--------------AAA----ACAC----CACCCATCTA-CGAATTAAAAT-------CATA---ACCTGT---GATCG-------AAAC-CCATGTCG--AACATGCATGTTGGCACCACCAAA----------------CACCACC-------A-----------------------------------------------------------------------------CACCAC--TGCACCACTGCA-------------CCATCGGTTGAATCT---------------CAGCAG---CAGCAGTACGGTGCTCC---------------------------------------------------------------------------------
droSim2 3l:9584820-9585114 + dsi_19426 TCT-----ATCTCCAACATATTC--TATCTATTCTATCTACATC----C---------------------------------------AATGTGAA------------------------TGTGTC--------------GTAT-GCACCTCCCAA-------------------CCAAC--------------AA-----ACAC----CACCCATCTA-CGAATTTAAAT-------CATA---ACCTGT---GATCG-------AAAC-CCATGTCG--AACATGCATGTTGGCACCACCAAA----------------CACCAC-TGCACCA---------------ATGCACCA----------------------------------------------------ATGCACCAA--TGCACCACTGCA-------------CCACCGGTTGAATCTCAGCA---G------CAGCAG---CAGCAGTACGGTGCTCCGTCTTACGA---------TGGCCAGCAGCAGCA---G------CCTGCAGCA---CAGTGGCAAAGA-TGCCGACGCTTAA
droSec2 scaffold_0:2057965-2058190 + TCT-----ATCTCCAACATATTC--TATCTATTGTATCTACATC----C---------------------------------------AATGTGAA------------------------TGTGTC--------------GTAT-GCACCTCCCAA-------------------CCAAC--------------AAA----ACAC----CACCCATCTA-CGAATTTAAAT-------CATA---ACCTGT---GACCG-------AAAC-CCATGTCG--AACATGCATGTTGGCACCACCAAA----------------CACCAC-TGCACC-------------------------------A--------------------------------------------ATGCACCAA--TGCACCACTGCA-------------CCACCGGTTGAATCTCAGCA---G------CAGCAG---CAGCAGTACGGTGC------------------------------------------------------------------------------------
droYak3 3L:9800158-9800411 + dya_754 TCT-----ATCTCCAACATATTC--TATCT-GTCTGTCCACATG----C---------------------------------------AATGTGAA------------------------TGTGTC--------------GTAT-GCACCTCCCAA-------------------CCAAC--------------AAA----ACAC----CAC-------------TCAAAT-------CATT---ACCTGT---GATCG-------CAAC-CCATGTCA--AACATGCATCTTGGCACCACCCAACTTCAATGCACCACCACTGCACC-------A--------------ATGCACCACTGCACCACTGCACCAATGCA-CCACTGCTCCA-------------------CTGCACCAC--TGCTCCACTGCA-------------CCACCGATTAAATATGAGCA---G------CAGCAG-------------------------------------------------------------------------------------------------CAGC
droEre2 scaffold_4784:9814029-9814281 + der_776 TCT-----ATCTCCAACATATTC--TATCT-GTCTGTCCACATG----C---------------------------------------AATGTGAA------------------------TGTGTC--------------GTAT-GCACCTCCCAA-------------------CCAAC--------------AAA----ACAC----CGCCCATCTA-CGAAACCAAAT-------CATA---ACCTGT---GATCG-------AAAC-CCATGTCA--AACATGCATGTTGG-GCCACCAAA----------------CACCAC-TGCACC-------------------------------A--------------------------------------------CTGCACCAA--TGCACCACTGCA-------------CCACCGATTGAATATCAGCA---GCAGCAACAGCAG---CAGCAGTACGGTGCTCCGTCTTACGA---------TGGCCAGCAG----------------------------------------------------C

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
TCT-----ATCTCGAACATATAT--TCTCT-CTCTTTCCACATC----G---------------------------------------TCTGTG--------------------------TGTGTC--------------GTTT-ACATCTCCCAA-------------------CCAAC--------------CAA----CCAC---ACACCCATCTA-CAACATC-----------CTTAA-CACCCGT---GATCG-------AAAC-CCAAA---------TG--------CACCAACGAA---------------CCACCA---------AATGCACCATTGAAC---------------------------------------CA---ATAGCAGCC------------ACAATACGGTAGCCAGCAGCAGCA-------GCA--------------GCA---GCCACAGCCACAG---CCACAGTCTGTGGCACCT------------------------------------------------------CAGTGGCAACAACAGCAGCCAGCTGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................................................................................................................................................................................................CAAA---------TG--------CACCAACGAA---------------CCACC..................................................................................................................................................................................................................................................................2112.002020000
.............................................................................................................................................................................................................................................................................................................................................................................................................GCAGCC------------ACAATACGGTAGCCAGCAG.....................................................................................................................................................2511.001010000
..........................................TC----G---------------------------------------TCTGTG--------------------------TGTGTC--------------GTTT-ACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000100
............................................................................................................................................................................................................................................................................AC-CCAAA---------TG--------CACCAACGAA---------------CCACCA---------AA......................................................................................................................................................................................................................................................2711.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGGTAGCCAGCAGCAGC.................................................................................................................................................2011.001001000
.........................................................................................................................................................................................................................................................................................................CCAACGAA---------------CCACCA---------AATGCACCATT.............................................................................................................................................................................................................................................2511.001010000
................................................G---------------------------------------TCTGTG--------------------------TGTGTC--------------GTTT-ACATCTCCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
...................................TTCCACATC----G---------------------------------------TCTGTG--------------------------TGTGTC--------------GT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGGTAGCCAGCAGCAGCA-------.........................................................................................................................................2111.001000001
........ATCTCGAACATATAT--TCTCT-CTCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---CCACAGTCTGTGGCACCT------------------------------------------------------CAGTGGC...................2711.001010000
..............................................................................................................................................................................................................................ACATC-----------CTTAA-CACCCGT---GATCG-------AA...........................................................................................................................................................................................................................................................................................................................2411.001010000
..........................................................................................................................................................................................................................................................................................................CAACGAA---------------CCACCA---------AATGCACCA...............................................................................................................................................................................................................................................2211.001010000
.............................................................................................................................................................................................................................................................................................TG--------CACCAACGAA---------------CCACCA---------AAT.....................................................................................................................................................................................................................................................2111.001010000
.........................TCTCT-CTCTTTCCACATC----G---------------------------------------TC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
........................................................................................................................................................................................................................................................................................................................................................TTGAAC---------------------------------------CA---ATAGCAGCC------------A.......................................................................................................................................................................1811.001010000
..................................................................................................................................................................................................................................................................................................................................................GCACCATTGAAC---------------------------------------CA---ATAGC........................................................................................................................................................................................1911.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................GCC------------ACAATACGGTAGCCAGCAGC....................................................................................................................................................2311.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................ACAATACGGTAGCCAGCAGCAGC.................................................................................................................................................2311.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGGCAACAACAGCAGCCAGCTG.2411.001010000
...................................................................................................................................................................................................................................................................................A---------TG--------CACCAACGAA---------------CCACCA---------........................................................................................................................................................................................................................................................1911.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCAGCAGCAGCA-------GCA--------------GC......................................................................................................................19200.051010000
dp5
TCT-----ATCTCGAACATATAT--TCTCT-CTCTTTCCACATC----G---------------------------------------TCTGTG--------------------------TGTGTC--------------GTTT-ACACCTCCCAA-------------------CCAAC--------------CAACCA---ACCACACACCCATCTA-CAACATC-----------CTTAA-CACCCGT---GATCG-------AAAC-CCAAA---------TG--------CACCAACGAA---------------CCACCA---------A----------------------------------------------------------------------------------A--TGCACTATTGAA-------------CC-----------------A---A------TAGCAG---CCACAATACGGT------------------------AGCCAGCAGCAGCCACAGTCACAGTCTGTGGCACCTCAGTGGCAACAACAGCAGCCAGCTGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................................................................................................................................................................................................................................AAA---------TG--------CACCAACGAA---------------CCACC..................................................................................................................................................................................................................................................................2013.0030300000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCTGTGGCACCTCAGTGGCAACA...............2513.0030000000030
...........................................................................................................................................................................................................................................................................AAC-CCAAA---------TG--------CACCAACGAA---------------CC.....................................................................................................................................................................................................................................................................2212.0020200000000
.................................................................................................................................................................................AAC--------------CAACCA---ACCACACACCCATC..............................................................................................................................................................................................................................................................................................................................................................................2312.0020101000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCACAGTCTGTGGCACCTCAGTGGC...................2612.0020200000000
...........................................................................................................................................................A-------------------CCAAC--------------CAACCA---ACCACACACCCATCTA-C..........................................................................................................................................................................................................................................................................................................................................................................2912.0020002000000
..........................................TC----G---------------------------------------TCTGTG--------------------------TGTGTC--------------GTTT-ACACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020200000000
............................................................................................TG--------------------------TGTGTC--------------GTTT-ACACCTCCCA............................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020200000000
..............................................................................................................................................................................................................................................CTTAA-CACCCGT---GATCG-------AAAC-CC......................................................................................................................................................................................................................................................................................................................2312.0020200000000
.........................................................................................CTGTG--------------------------TGTGTC--------------GTTT-ACACCTCCCA............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
..........................................................................................................................................................................................................................................................................................................CAACGAA---------------CCACCA---------A----------------------------------------------------------------------------------A--TGCACTAT..........................................................................................................................................................2311.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTCTGTGGCACCTCAGTGGCAACA...............2611.0010001000000
.............................................................................................................................................................................................................CACACACCCATCTA-CAACA......................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
........................................CATC----G---------------------------------------TCTGTG--------------------------TGTGTC--------------GTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..................................................................................................................................................................................................................................C-----------CTTAA-CACCCGT---GATCG-------AAAC-CCA.....................................................................................................................................................................................................................................................................................................................2511.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TGCACTATTGAA-------------CC-----------------A---A------TAGCAG---CC................................................................................................2411.0010001000000
........................................................................................................................TGTGTC--------------GTTT-ACACCTCCCAA-------------------CCAAC--------------C....................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000001000
.................................................................................................................................................................................................................................................AA-CACCCGT---GATCG-------AAAC-CC......................................................................................................................................................................................................................................................................................................................2011.0010000010000
....................................................................................................................................................................................................................................................CACCCGT---GATCG-------AAAC-CCA.....................................................................................................................................................................................................................................................................................................................1911.0010100000000
.....................................................................................................................................................................................................CCA---ACCACACACCCATCTA-...........................................................................................................................................................................................................................................................................................................................................................................1911.0010001000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGTGGCACCTCAGTGGCAACA...............2411.0010100000000
........ATCTCGAACATATAT--TCTCT-........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGT------------------------AGCCAGCAGCAGCC................................................1911.0010100000000
...........................................C----G---------------------------------------TCTGTG--------------------------TGTGTC--------------GTTT-ACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.............................................................................................................................................................................................................................AACATC-----------CTTAA-CACCCGT---GATCG-------AAAC-CC......................................................................................................................................................................................................................................................................................................................2911.0010100000000
................................................G---------------------------------------TCTGTG--------------------------TGTGTC--------------GTTT-ACACCTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAA-------------CC-----------------A---A------TAGCAG---CCACA.............................................................................................2111.0010000010000
.............................................................................................................................................TTT-ACACCTCCCAA-------------------CCAAC--------------CAACCA---ACC.........................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
.........................................................................................................................................................................................................................TA-CAACATC-----------CTTAA-CACCCGT---GATCG-------AA...........................................................................................................................................................................................................................................................................................................................2811.0010100000000
................................................G---------------------------------------TCTGTG--------------------------TGTGTC--------------GTTT-ACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.......................................ACATC----G---------------------------------------TCTGTG--------------------------TGTGTC--------------GTTT-ACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
......................................................................................................................................................................................................................................................CCCGT---GATCG-------AAAC-CCAAA---------TG--------................................................................................................................................................................................................................................................................................................2111.0010000001000
..........................................TC----G---------------------------------------TCTGTG--------------------------TGTGTC--------------GTTT-ACACCTCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
.............................................................................................................................................................................................................................AACATC-----------CTTAA-CACCCGT---GATCG-------AAAC-C.......................................................................................................................................................................................................................................................................................................................2811.0010001000000
...........TCGAACATATAT--TCTCT-CTCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGTGGCACCTCAGTGGC...................2011.0010000000010
................................................G---------------------------------------TCTGTG--------------------------TGTGTC--------------GTTT-A.....................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010000
....................................................................................................................................................CCTCCCAA-------------------CCAAC--------------CAACCA---ACCA........................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.............................................................................................................................................................................................................CACACACCCATCTA-CAACATC-----------CTTAA-C..................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGGT------------------------AGCCAGCAGCAGCCACA.............................................2411.0010100000000
.........................................................................................................................................................................................................................................................GT---GATCG-------AAAC-CCAAA---------TG--------CA..............................................................................................................................................................................................................................................................................................2011.0010000001000
..................................................................................................................................................................................................................................................A-CACCCGT---GATCG-------AAAC-CCAAA---------TG--------CA..............................................................................................................................................................................................................................................................................................2611.0010000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---CCACAATACGGT------------------------AGCCA.........................................................1911.0010100000000
............................................................................................................................................................................................................................................................................................................ACGAA---------------CCACCA---------A----------------------------------------------------------------------------------A--TGCACTATTGAA-------------CC-----------------......................................................................................................................2711.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCCACAGTCACAGTCTGTGGCACCTC.........................2811.0010100000000
.......................................................................................................................................................................................................................................................CCGT---GATCG-------AAAC-CCAAA---------TG--------................................................................................................................................................................................................................................................................................................2011.0010000001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCCACAGTCACAGTCTGTGGCACCT..........................2811.0010100000000
........................................................................................TCTGTG--------------------------TGTGTC--------------GTTT-ACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
................................TCTTTCCACATC----G---------------------------------------TCTGTG--------------------------TGTGTC--------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.......................................ACATC----G---------------------------------------TCTGTG--------------------------TGTGTC--------------GTTT-A.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001000000
......................................CACATC----G---------------------------------------TCTGTG--------------------------TGTGTC--------------GTTT-ACAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000001000
.................................................................................................................................................................................................................................................AA-CACCCGT---GATCG-------AAAC-CCA.....................................................................................................................................................................................................................................................................................................................2111.0010000010000
.........................................................................................................................................................CAA-------------------CCAAC--------------CAACCA---ACCACACACC..................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCTGTGGCACCTCAGTGGCAA.................2311.0010010000000
....................................................................................................................................................................................................................................................CACCCGT---GATCG-------AAAC-CCAAA---------T.........................................................................................................................................................................................................................................................................................................2211.0010100000000
.........................................................................................................................................................................................................................................................GT---GATCG-------AAAC-CCAAA---------TG--------CACCAACGAA---------------.......................................................................................................................................................................................................................................................................2811.0010100000000
.........................................ATC----G---------------------------------------TCTGTG--------------------------TGTGTC--------------GTTT-ACACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
droWil2
TCT-----CCCTCTA-TATATA----------------TATATA----TAAATTTATTATTCCTCGATCTAAATCTCTTTGCACTATCCGTGTGTA------------------------TGTGTG----TGTGTATATTGTTTTGCACCTTCCTC-------TCCAAAAAACAACCAA--------------------------------ACCATAAATCAACAT----C-------CATAAATTTCTGT---GACCT------------------------CATGCATGTTTGCACCAAAAGC----------------CACCTC-AACATCA---------------ACA-----------------------ACAACAACA---------------------------------------ACCACCACA-------------ACA--------------GCA---GCCACCACAACAA---CAACAATATGGTGCACCATCATACAA---------CAATTATCAACAACA------------------------------ACCACAGCAG-CAGCAGCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................................................................................................................................................................ATTTCTGT---GACCT------------------------CATGCA......................................................................................................................................................................................................................................................................................................1913.00330000
.....................................................................................................................................................................................................................................................TTCTGT---GACCT------------------------CATGCATGTTTGCACCA...........................................................................................................................................................................................................................................................................................2813.00330000
..................................................................................................................................................................................................................................................AATTTCTGT---GACCT------------------------CATGCATGTT..................................................................................................................................................................................................................................................................................................2412.00220000
.....................................................................................................................................................................................................................................................TTCTGT---GACCT------------------------CATGCATGTTTGCACC............................................................................................................................................................................................................................................................................................2712.00220000
.......................................................................AATCTCTTTGCACTATCCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
...............................................................................................................................................................................................................................................ATAAATTTCTGT---GACCT------------------------CATGCC......................................................................................................................................................................................................................................................................................................2311.00110000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAA---------CAATTATCAACAACA------------------------------..................2111.00101000
...................................................ATTTATTATTCCTCGATCTAAATCTCTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00110000
....................................................................................................................................................................................................................................................TTTCTGT---GACCT------------------------CATGCA......................................................................................................................................................................................................................................................................................................1811.00110000
....................................................................................................................................................................................................................................................TTTCTGT---GACCT------------------------CATGCATGTTTGCACC............................................................................................................................................................................................................................................................................................2811.00110000
.........................................................................................................................GTGTG----TGTGTATATTGTTTTGCACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
..................................................................................................................................................................................A--------------------------------ACCATAAATCAACAT----C-------CATA.....................................................................................................................................................................................................................................................................................................................................................2111.00101000
...........................................................................................................................................TGTTTTGCACCTTCCTC-------TCC.................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAA---CAACAATATGGTGCACCA................................................................................2411.00110000
.............................................................................................................................................................................................................................................................................................................................................................................................AACA---------------------------------------ACCACCACA-------------ACA--------------GCA---GCC...............................................................................................................2211.00110000
...............................................................................................................................................................................................................................................ATAAATTTCTGT---GACCT------------------------CATGCA......................................................................................................................................................................................................................................................................................................2311.00110000
...........................................................................................................................................................................................................................................................................................................................................ATCA---------------ACA-----------------------ACAACAACA---------------------------------------ACCACCACA-------------AC.......................................................................................................................................2711.00100010
.......................................................................................................................................................................AAAAACAACCAA--------------------------------ACCATAA.............................................................................................................................................................................................................................................................................................................................................................................1911.00101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA---------CAATTATCAACAACA------------------------------ACCACAGC..........2611.00100010
......................................................................................................................................................................................................................................................TCTGT---GACCT------------------------CATGCATGTTTGCA..............................................................................................................................................................................................................................................................................................2411.00101000
......................................................................................................................................................................................................................................................TCTGT---GACCT------------------------CATGCATGTTTGCACC............................................................................................................................................................................................................................................................................................2611.00110000
...........................................................................TCTTTGCACTATCCGTGTGTA------------------------TG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
......................................................................................................................................................TTCCTC-------TCCAAAAAACAACCAA--------------------------------ACCA................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
...........................................................................................................................................................................................................................................................................................................................................................................................ACAACA---------------------------------------ACCACCACA-------------ACA--------------GCA---GCCACCAC..........................................................................................................2911.00101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCAACAACA------------------------------ACCACAGCAG-CAGCAGC2811.00100001
............................................................................................................................................................................................................................................................................................................AAAGC----------------CACCTC-AACATCA---------------ACA-----------------------ACA............................................................................................................................................................................................................2411.00100100
............................................................................................................................................................................................................................................................................................................................................................................................................................................CCACA-------------ACA--------------GCA---GCCACCACAAC.......................................................................................................2211.00101000
...................................................................................................................................................................................................................................................ATTTCTGT---GACCT------------------------CATGCATGTTTGCACC............................................................................................................................................................................................................................................................................................2911.00110000
...................................................................................................................................................................................................................................................ATTTCTGT---GACCT------------------------CATGCATGTT..................................................................................................................................................................................................................................................................................................2311.00101000
.....................................................TTATTATTCCTCGATCTAAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
...................................................................................................................................................................................................................ACCATAAATCAACAT----C-------CAT......................................................................................................................................................................................................................................................................................................................................................1911.00101000
................................................................................................................................................................................................................................................................................................................................................................................................A---------------------------------------ACCACCACA-------------ACA--------------GCA---GCCA..............................................................................................................2011.00100100
.................................................................................................................................................................................................................................................................................................................................CACCTC-AACATCA---------------ACA-----------------------ACAACA.........................................................................................................................................................................................................2211.00101000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................ACA-------------ACA--------------GCA---GCCACCACAACA......................................................................................................2120.50101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACA------------------------------ACCACAGCAG-CAGCA..2330.33100100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................CA-------------ACA--------------GCA---GCCACCACAACA......................................................................................................2030.33101000
........................................................................................................................................................................................................................................................................................................................................................................................ACAACAACA---------------------------------------ACCACCACA-------------AC.......................................................................................................................................2040.25101000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA------------------------------ACCACAGCAG-CAGCAGC2250.20100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------------------------------ACCACAGCAG-CAGCAGC1980.13100010
........................................................................................CGTGTGTA------------------------TGTGTG----TGTGTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................20100.10101000
droVir3
ATT-----TAGTGCATTTATCTC--TCTCTTTCTCTCCTTCTCT----C---------------------------------------TGTGTGTATCTCTCTCCTCTCCCTTATTATTGTTTAT-------------------------TTACAATTGACCAGA----------TCAAC--------------GGCGGAGCCAG----CGGCG--------------------------------CC---------------------------------AATGCGAATGCTAATGCGAGC---------------------GCA---------AATGCAGCGCAGCAG---------------------------------------CA---GCAGCAGCAGCAGCAGCAGCTACAA------CAGCAGCAGCA---------------------------ACAGCAG---CAGC---AGCAGCTACAA-----------------CAACAGCAACA---------------------------------------------------------------ASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................................................................................................................................................................................................................................................................................................GCA---------AATGCAGCGCAGCAG---------------------------------------CA---GCA..........................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................CGAGC---------------------GCA---------AATGCAGCGCAGCAG---------------------------------------CA---GC...........................................................................................................................................................................................2711.001000000000000001000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................GCTAATGCGAGC---------------------GCA---------AATGCAGC................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................GCGCAGCAG---------------------------------------CA---GCAGCAGCA....................................................................................................................................................................................20200.153002000000000000000000000000000000001000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAGCAGCAGCTACAA------..............................................................................................................................................................2590.111000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCA---------------------------ACAGCAG---CAGC---AGCA...................................................................................................20200.102000000000000000000000000000000000000200000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCA---------------------------ACAGCAG---CAGC---AGCAGCT................................................................................................23200.102001001000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAGCAGCAGCTACA.....................................................................................................................................................................24150.071001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCA---------------------------ACAGCAG---CAGC---AGCAGCT................................................................................................25180.061000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................CA---GCAGCAGCAGCAGCAGCAGCT........................................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................CAA------CAGCAGCAGCA---------------------------ACAGC...................................................................................................................19200.051000000000000000100000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCA---------------------------ACAGCAG---CAGC---A......................................................................................................20200.051000000000000000000000010000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................ACAA------CAGCAGCAGCA---------------------------ACAGCA..................................................................................................................21200.051000000000000000000000000001000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................AGCGCAGCAG---------------------------------------CA---GCAGCAGC.....................................................................................................................................................................................20200.051000000000000000000000000000000001000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---------------------------ACAGCAG---CAGC---AGCAGC.................................................................................................19200.051000000000000000000000000000000000000000000000000000001000000000
....................................................................................................................................................................................................................................................................................................................................................AGCGCAGCAG---------------------------------------CA---GCAGCAGCAGCA.................................................................................................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................A---GCAGCAGCAGCAGCAGCAGCT........................................................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................AA------CAGCAGCAGCA---------------------------ACAGCAG---C.............................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCA---------------------------ACAGCAG---CAGC---.......................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAG---CAGC---AGCAGCTAC..............................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAGCAGCTACA.....................................................................................................................................................................21200.051000000000000000000000000001000000000000000000000000000000000000
droMoj3
TGT-----CTCTCTTATCTCTCT--TTACT-------------CCGGTG------------------------TCTGTTTACTCTG--TTTGTT--------------------------TGTGTAAATGTTTAACT---GT-T-GCACTTG-CAC-------------------CCAA--------------------------------ACCACCAA-CAACAT----C-------CATAA-CCTCTGTCTCGATTGGCACCTGAAACACCATGACT--CGCATGCA-----ACACCACTGAA----------------TACCACC-------A-----------------------------------------------------------------------------------------------CA------------------------------GCA---GCAACCACCACAG---CAACAATATGGTGCACCGTCCTACAA---------CAACTACCAG-------------------------------------------------CAGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................................................................................................................................................................................................................................................................ACACCATGACT--CGCATGCA-----.................................................................................................................................................................................................................................................................................................1912.002200000
.....................CT--TTACT-------------CCGGTG------------------------TCTGTTTACTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.............................................................................................................................................................................................................................................................................CACCATGACT--CGCATGCA-----ACACCACTG........................................................................................................................................................................................................................................................................................2711.001100000
...........................................................................................................................................................................................................................................................................AACACCATGACT--CGCATGCA-----ACACCAC..........................................................................................................................................................................................................................................................................................2711.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAATATGGTGCACCGTCCTACA.........................................................................2311.001100000
................................................................................ACTCTG--TTTGTT--------------------------TGTGTAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
.................................................................................CTCTG--TTTGTT--------------------------TGTGTAAATGTTTAACT---G..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001000001
.................................................................................................................................GTTTAACT---GT-T-GCACTTG-CAC-------------------CCAA--------------------------------A...................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.................................................................................................................................................................................................................................................................................ATGACT--CGCATGCA-----ACACCACT.........................................................................................................................................................................................................................................................................................2211.001001000
..................................................................................................................................TTTAACT---GT-T-GCACTTG-CAC-------------------CC......................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
..............................................................................................................................................................................................................................................CATAA-CCTCTGTCTCGATTGGCACC...............................................................................................................................................................................................................................................................................................................................2511.001100000
.....................................................................................................................................AACT---GT-T-GCACTTG-CAC-------------------CCA.....................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
....................TCT--TTACT-------------CCGGTG------------------------TCTGTTTACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
...........................ACT-------------CCGGTG------------------------TCTGTTTACTCTG--TT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
............................................................................................................................................................................................................................................................................ACACCATGACT--CGCATGCA-----ACACCACTGA.......................................................................................................................................................................................................................................................................................2911.001100000
.................................................................................................................................................................................................................................................AA-CCTCTGTCTCGATTGGCACCT..............................................................................................................................................................................................................................................................................................................................2311.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACCACCACAG---CAACAA............................................................................................1911.001000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAG---CAACAATATGGTGCACC.................................................................................2011.001100000
..........................................................................................................................................................................................................................................................................................GCATGCA-----ACACCACTGAA----------------TACCACC-------A-----------------------------------------------------------------------------------------------CA------------------------------........................................................................................................................2811.001100000
...............ATCTCTCT--TTACT-------------CCGGTG------------------------T.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..................................................................................................................................................................................................................................................A-CCTCTGTCTCGATTGGCACCTGAA...........................................................................................................................................................................................................................................................................................................................2511.001100000
................TCTCTCT--TTACT-------------CCGGTG------------------------TCTGTTTAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
................................................................................................................................................................................................................................AT----C-------CATAA-CCTCTGTCTCGATT.....................................................................................................................................................................................................................................................................................................................................2211.001100000
.............................................................................TTTACTCTG--TTTGTT--------------------------TGTGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.................................................................................................................................................GCACTTG-CAC-------------------CCAA--------------------------------ACCACC..............................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...............................................................................................................................................................................................................................................ATAA-CCTCTGTCTCGATTGGC..................................................................................................................................................................................................................................................................................................................................2111.001100000
......................................................................................................................................................................................................................................................TCTGTCTCGATTGGCACCTGAAAC.........................................................................................................................................................................................................................................................................................................................2411.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAATATGGTGCACCGTC..............................................................................1911.001100000
droGri2
TAC-----AA-----------------------------------------------------------------------------------------------------------------------------------------------CAA-------------------CCAAC--------------CATGCAACAAC----CGCCCATACA-AC-----AAAC-------AACA---AC-------------------------------------------------ACAACA---------------------GCA---------AAT--------------------------------------TCTTCAGCAACATCACTTGCAGCAGCTGCATCAGCAGCAACAATTCGCTCAACAGCAGCA---------------------------GCAGCAG---CAAC---AGCAGCAACAA-----------------CAACAACAACA----------GTTCCT---------------------------------------TCCAAATGTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...................................................................................................................................................................................................ATGCAACAAC----CGCCCATACA-AC-----A...................................................................................................................................................................................................................................................................................................................................................................2311.00110
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA---------------------------GCAGCAG---CAAC---AGCAGCAACA.............................................................................................24200.10220
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA---------------------------GCAGCAG---CAAC---AGCAGCA................................................................................................21200.10220
......................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAACAGCAGCA---------------------------GCAGCA..................................................................................................................20140.07110
.........................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCA---------------------------GCAGCAG---CA............................................................................................................20200.05110
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAA-----------------CAACAACAACA----------GT....................................................20200.05110
droAna3
TCT-----ATCTA--------TC--TATCT-CTCTTTCTCTCTCCCTTG------------------------TCTCCC---------AAAATTAT----------------------TGTTTATT--------------GTAT-ATATTTTGCAATTGCCCAGA----------TCAA--------------------------------------------------------------------------------------------------------------------CGGCAGCGGA---------------GTTGCA---------ACTGCACCGCAGCAA---------------------------------------CA---GTCGCAGTCGCAGCAGCAACAGCAA------CAGCAGCAGCAACAGCAATCGCAGCTAGTAGGGC---AGCAGCAG---CAGC---AGCAGCAACAA-----------------CAACAGTCACAACAA-CAGCAGCAACA------------------------------ATCGCAGCAG-CAACAGCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGGGC---AGCAGCAG---CAGC---AGCAGC.................................................................................................2511.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAGTAGGGC---AGCAGCAG---CAGC---.......................................................................................................2311.001000010
............................................................................................................................................................................................................................................................................................................................................................................................................CGCAGTCGCAGCAGCAAC.........................................................................................................................................................................1840.251010000
................................................................................................................................................................................................................................................................................................................................................................................................................................CAA------CAGCAGCAGCAACAGCAAT...........................................................................................................................................2250.201000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAG---CAGC---AGCAGCA................................................................................................19200.102200000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAG---CAGC---AGCAGCAAC..............................................................................................21200.102020000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGC---AGCAGCAG---CAGC---AGCAGCA................................................................................................23110.091100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAA------CAGCAGCAGCAACAGC..............................................................................................................................................26140.071010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGC---AGCAGCAG---CAGC---AGCAG..................................................................................................21150.071100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAA------CAGCAGCAGCAACAGC..............................................................................................................................................24200.051010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................AGCAA------CAGCAGCAGCAACAGC..............................................................................................................................................21200.051010000
........................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAA------CAGCAGCAGC....................................................................................................................................................21200.051000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---AGCAGCAG---CAGC---AGCAGC.................................................................................................20200.051100000
......................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAGCAA------CAGCAGCAGCAAC.................................................................................................................................................26200.051010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG---CAGC---AGCAGCAACAA-----------------...........................................................................20200.051000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAG---CAGC---AGCAGCAACA.............................................................................................21200.051100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................AGCAA------CAGCAGCAGCAACAG...............................................................................................................................................20200.051010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---AGCAGCAG---CAGC---AGCAGCAACA.............................................................................................23200.051000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................GCAA------CAGCAGCAGCAACAGC..............................................................................................................................................20200.051000001
......................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAGCAA------CAGCAGCAGCA...................................................................................................................................................24200.051100000
................................................................................................................................................................................................................................................................................................................................................................................................................................CAA------CAGCAGCAGCAACAGCA.............................................................................................................................................20200.051001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---CAGC---AGCAGCAACAA-----------------CAACA......................................................................21200.051100000
............................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAA------CAGCAGCAGCAAC.................................................................................................................................................20200.051010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---CAGC---AGCAGCAACAA-----------------CAACAG.....................................................................23200.051100000
droBip1
TCT-----ATTTCCAACATATAT-CTATAT-CTATGTCTACATC----A---------------------------------------AATGTGAA------------------------TGTGTT--------------GTTTCGCACCCAC----------------------CCGACAAAATCGACAAAAACAA----ACAC----CATCCATCTA-CAA--TTAAATAAAAACCCATTA-CACCTGT---GATCG-------C---------------ACATGCATGTTGGCACCACC-----------------------------------------------------------------------------------------------------------------------------ACCGAT-------------CCACCG-------------A---G------TAGCAG---CAGCAATACGGTGCTCCATCCTACGG---------TGGCTACCAACAGCAACAG------C---------------------------------CTGCSizeHit CountTotal NormTotal
No Reads
droKik1
TATTCTCGATTTCCAACATACTCTCTATCT-CTCCGTCTACATC----C---------------------------------------AATGTG-----------------------------------------------TAT-GCACCTCCCC---------------------------------------AAC----GCAC----CATAAATCTA-TGTACTCAAAC-------CATA---ACCTGT---GATCG-------AAAA-CCATGACACCACCATGCA--CTCGCACCACCCGAA--------------ACAC--------------------------------------------------------------------------------------------------------CTGAA-------------CCTCCGATCGA------GCA---G------CAGCAG---CAGCAGTACGGTGCTCCGTCTTACGA---------TGGCTACCAGCAACA---G------C---------------------CAC-------CGCAGCSizeHit CountTotal NormTotal
No Reads
droFic1
TCT-----ATTTTCAACATATTC--TATCT-GTCTGTCTACATC----C---------------------------------------ACTGTGAA------------------------TGTGTT--------------GTAC-GCACCTCCCAA-------------------CCAAC--------------CAA----ACAA----TATCCATCAA-TGAATTCAAATCACGAC-CATA---ACCTGT---GATCG-------AAAC-CCATGACA--AACACGCATGCTGGCACCACCGAA---------------CCAC---------------------------------------------------------------------------------------TCAACTAC--TGCACCACAAAA-------------CCACCGATTGAGTAACAGCA---G------CAGCAG---CAGCAGTACGGTGCTCCTTCCTACGA---------TGGCTACCAGCAGCAGCAG------CC----------------------------------G-SizeHit CountTotal NormTotal
No Reads
droEle1
TCT-----ATCTCCAACATATTC--TATCT-GTCTATCTACATC----C---------------------------------------ACTGTGAA------------------------TGTGTT--------------GTAT-GCACCTCCCAA-------------------CCAAT--------------AAA----ACAC----CACC--------------ATAC-------CATA---ACTTGT---GATCG-------AAAC-CCATGTCA--AACATGCATGTTGGCACCACCGAA---------------ACACCACC-------A----------------------------------------------------------------------------------A--TGCACCACTGCA-------------CCACCGGTCGAAT------A---G------CAGCAG---CAGCAGTACGGTGCTCCGTCTTACGA---------TGGCCAGCAGCAGCAGCAA------CCTGCAACA---CCGTGGCAACAGCAGCAA-CAGCAACSizeHit CountTotal NormTotal
No Reads
droRho1
TCT-----ATCTCCAACATATTC--TATCT-GTCTGTGTACATC----C---------------------------------------ACTGTGAA------------------------TGTGTC--------------GAAT-GCACCTCCCAA-------------------CCAAT--------------AAA----ACAC----CACCCATCTA-TGAAATCAAAC-------CATA---ACCTGT---GATCG-------AAAC-CCATGTCG--AACATGCATGTTGGCACCACCGAA----------------CACCACC-------A--------------------------------------------------------------------------ATGCACCAA--TGTACCACTGCA-------------CCACCGATTGAAT---AGCA---G------CAGCAG---CAGCAGTACGGTGCTCCGTCTTACGA---------TGGCCAGCAGCAGCAACAG------C---------------------------AACCTGCAGCSizeHit CountTotal NormTotal
No Reads
droBia1
TCT-----ATCTCCAACATATTC--TATCT-GTCTGTCTACATC----C---------------------------------------AATGTGAA------------------------TGTGTC--------------GTAC-GCACCTCCCAA-------------------CCAAC--------------AAC----ACAC----CACCCATCTT-CGAAATCACAC-------CATA---CCCTGT---GGTCG-------AAAC-CCATGACA--AACATGCATGCTGGCACCACCAAA----------------CACCAAC-------G----------------------------------------------------------------------------------A--C-CATCACTG----------------------------------A---G------CAGCAG---CAGCAGTACGGTGCTCCTTCCTACGA---------CGGCTACCAGCAGCAACAG------CC------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TCT-----ATCTCCAACATATTC--TATCT-GTCTGTCTACATC----C---------------------------------------AATGTGAA------------------------TGTGTC--------------GTAT-GCACCTCCCAA-------------------CCAAC--------------AAAACAAACAC----CACCCATCAA-TGAAATCAAAC-------CATA---ACCTGT---GATCG-------AAAC-CCATGACA--AACATGCATGTTGGCACCACCAAA----------------AACC------------------------------------------------------------------------------------------------------ACTGCA-------------CCACCGGTTGAAC---AGCA---G------CAGCAG---CAGCAGTACGGTGCTCCGTCTTACGA---------TGGCCACCAG----------------------------------------------------CSizeHit CountTotal NormTotal
No Reads
droEug1
TCT-----ATTTCCAACATATTC--TCTCT-GTCTATCTACATC----C---------------------------------------AATGTGAA------------------------TGTGTC--------------GTAT-AAACCTTCCAA-------------------CCAAC--------------AAA----ACAC----CATCCATCAA-TGAAATCAAAC-------CATA---ACCTGT---GATCG-------AAAC-CCATGACA--AACATGCATGTTGGCACCACCGAA----------------CACCACC-------A--------------------------------------------------------------------------------------------ATGCA-------------CCACCGATTGAAT---AGCA---A------CAGCAG---CAGCAGTACGGTGCTCCGTCTTACGG---------TAGTCAACAGCAGCAACCG--------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
TCT-----ATCTCCAACATATTC--TATCAATTCTATCTACATC----C---------------------------------------AATGTGAA------------------------TGTGTC--------------GTAT-GCACCTCCCAA-------------------CCAAC--------------AAA----ACAC----CACCCATCTA-CGAATTAAAAT-------CATA---ACCTGT---GATCG-------AAAC-CCATGTCG--AACATGCATGTTGGCACCACCAAA----------------CACCACC-------A-----------------------------------------------------------------------------CACCAC--TGCACCACTGCA-------------CCATCGGTTGAATCT---------------CAGCAG---CAGCAGTACGGTGCTCC---------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---CAGCAGTACGGTGCTC..................................................................................18141.004100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000052100010300000420000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---CAGCAGTACGGTGCTCC---------------------------------------------------------------------------------19130.003000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000041100000300000110000800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................AC--------------AAA----ACAC----CACCCATCTA-CG.........................................................................................................................................................................................................................................................................................................................................................................21115.00150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000003000100900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................GCA-------------CCATCGGTTGAATCT---------------C..........................................................................................................19113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002600000000000000100300000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---CAGCAGTACGGTGCTCC---------------------------------------------------------------------------------18113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001800000000003000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.............................................................................................GAA------------------------TGTGTC--------------GTAT-GCACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000
...............................................................................................A------------------------TGTGTC--------------GTAT-GCACCTCCCA............................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG---CAGCAGTACGGTGCTCC---------------------------------------------------------------------------------2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...............................................................................................................................................................................................................................................ATA---ACCTGT---GATCG-------AAAC-C.......................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................CG-------AAAC-CCATGTCG--AACA..........................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATCGGTTGAATCT---------------CAGC.......................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.........................................................................................ATGTGAA------------------------TGTGTC--------------GTAT-GCAATC................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCA-------------CCATCGGTTGAA.............................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................ATGTGAA------------------------TGTGTC--------------GTAT-GC....................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................ACATGCATGTTGGCACCACCA........................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TGCA-------------CCATCGGTTGAATCT---------------...........................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................CCAAC--------------AAA----ACAC----CACCCATCTA-CG.........................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................TGCATGTTGGCACCACCAAA----------------CACC..................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................AA----ACAC----CACCCATCTA-CGAATTAA...................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................ACCACTGCA-------------CCATCGGTTGAA.............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................A---ACCTGT---GATCG-------AAAC-CCATGTCG--A.............................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CACCAC--TGCACCACTGCA-------------C........................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TATCTACATC----C---------------------------------------AATGTGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................AT-------CATA---ACCTGT---GATCG-------T............................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................ACCACC-------A-----------------------------------------------------------------------------CACCAC--TGCACCACT.........................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................ATCAATTCTATCTACATC----C---------------------------------------A..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CT-----ATCTCCAACATATTC--TATCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................CTGT---GATCG-------AAAC-CCATGTCG--A.............................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................ATC----C---------------------------------------AATGTGAA------------------------TGTGTC--------------GTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................ACATGCATGTTGGCACCA...........................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................CCACTGCA-------------CCATCGGTTGAA.............................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................ATCAATTCTATCTACATC----C---------------------------------------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................AA----ACAC----CACCCATCTA-CGAATTAAAA.................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TGTTGGCACCACCAAA----------------CACCACC-------........................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................AC--TGCACCACTGCA-------------CCATCGGT.................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................A-----------------------------------------------------------------------------CACCAC--TGCACCACTGCA-------------CCATCGGTT................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................C----C---------------------------------------AATGTGAA------------------------TGTGTC--------------GTAT-GC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................C----CACCCATCTA-CGAATTAAAA.................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................CAAA----------------CACCACC-------A-----------------------------------------------------------------------------CACCAC--..................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................AAC-CCATGTCG--AACATGCATGT...................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...............................................................................................A------------------------TGTGTC--------------GTAT-GCACCTCCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................C----C---------------------------------------AATGTGAA------------------------TGTGTC--------------GTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................CATCTA-CGAATTAAAAT-------C........................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................A---ACCTGT---GATCG-------AAAC-CCATGTCG--..............................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................CCAC--TGCACCACTGCA-------------CC.......................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT---------------CAGCAG---CAGCAGTACGGTGCTC..................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................AATGTGAA------------------------TGTGTC--------------GTAT-GCACCT................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................CATA---ACCTGT---GATCG-------AAAC-CCATGTCG--..............................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
............................................................................................................................TC--------------GTAT-GCACCTCCCAA-------------------CCAAC--------------A....................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................TGTGTC--------------GTAT-GCACCTCCCAA-------------------C.......................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................ACATC----C---------------------------------------AATGTGAA------------------------TGTGTC--------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................CTACATC----C---------------------------------------AATGTGAA------------------------TGTGTC--------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................C---------------------------------------AATGTGAA------------------------TGTGTC--------------GTAT-......................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................CAA-------------------CCAAC--------------AAA----ACAC----CACC..................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................GCATGTTGGCACCACCATC----------------......................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................CCTGT---GATCG-------AAAC-CCATGTCG--AACAT.........................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................CATGTCG--AACATGCATGTTGGCACCA...........................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................ACCTGT---GATCG-------AAAC-CCATGTCG--AA............................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................ATA---ACCTGT---GATCG-------AAAC-CC......................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................CTACATC----C---------------------------------------AATGTGAA------------------------TGTGTC--------------GTAT-......................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATCGGTTGAATCT---------------CAGCAG---..................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------------CCATCGGTTGAATCT---------------CA.........................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................GTGAA------------------------TGTGTC--------------GTAT-GCACCT................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TGTGAA------------------------TGTGTC--------------GTAT-GCACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................CCTGT---GATCG-------AAAC-CCATGTCG--A.............................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG---CAGCAGTACGGTGCT...................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................ATTC--TATCAATTCTATCTACATC----C---------------------------------------A..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TA---ACCTGT---GATCG-------AAAC-CCATGTCG--A.............................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................A------------------------TGTGTC--------------GTAT-GCACCTCCCAA-------------------CCA.....................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................CACCCATCTA-CGAATTAA...................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCT---------------CAGCAG---CAGCAGTACGGTGCTC..................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................AATTAAAAT-------CATA---ACCTGT---.........................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................AAC-CCATGTCG--AACATGCATGTTGGCA..............................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................A----------------CACCACC-------A-----------------------------------------------------------------------------CACCAC--TGCACCAC..........................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................CAC----CACCCATCTA-CGAATT.....................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................AT-------CATA---ACCTGT---GATCG-------AAAC-CCATGTC.................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
......................................................................................................................................................................................................................ATCTA-CGAATTAAAAT-------CAT......................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................CCAC--TGCACCACTGCA-------------CCA......................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................A-----------------------------------------------------------------------------CACCAC--TGCACCACTGCA-------------CCATC....................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................AAT-------CATA---ACCTGT---GATCG-------A............................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................TCTACATC----C---------------------------------------AATGTGAA------------------------TGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CACTGCA-------------CCATCGGTTGAA.............................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................CCAA-------------------CCAAC--------------AAA----ACAC----CACCCATC..............................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................AAT-------CATA---ACCTGT---GATCG-------AAAC-CCA.....................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................AA----------------CACCACC-------A-----------------------------------------------------------------------------CACCAC--TGC...............................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................AAAT-------CATA---ACCTGT---GATCG-------.............................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TATTC--TATCAATTCTATCTACATC----C---------------------------------------A..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................AA----ACAC----CACCCATCTA-CGAATTA....................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................ATCTACATC----C---------------------------------------AATGTGAA------------------------TGTGTC--------------GTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...............................................................................................A------------------------TGTGTC--------------GTAT-GCACCTCCCAA-------------------CCAA....................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.............................................................................................GAA------------------------TGTGTC--------------GTAT-GCACCTCCCAA-------------------CCA.....................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TCT-----ATCTCCAACATATTC--TATCTATTCTATCTACATC----C---------------------------------------AATGTGAA------------------------TGTGTC--------------GTAT-GCACCTCCCAA-------------------CCAAC--------------AA-----ACAC----CACCCATCTA-CGAATTTAAAT-------CATA---ACCTGT---GATCG-------AAAC-CCATGTCG--AACATGCATGTTGGCACCACCAAA----------------CACCAC-TGCACCA---------------ATGCACCA----------------------------------------------------ATGCACCAA--TGCACCACTGCA-------------CCACCGGTTGAATCTCAGCA---G------CAGCAG---CAGCAGTACGGTGCTCCGTCTTACGA---------TGGCCAGCAGCAGCA---G------CCTGCAGCA---CAGTGGCAAAGA-TGCCGACGCTTAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGA---------TGGCCAGCAGCAGCA---G------CCTGCA................................2511.00100000000000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCA---G------CCTGCAGCA---CAG.......................2011.00100001000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTCCGTCTTACGA---------TG.............................................................1811.00100100000000000000
................................................................................................................................................................................................................................................TA---ACCTGT---GATCG-------AAAC-CCATGTCG--AACA..........................................................................................................................................................................................................................................................................................................2911.00100010000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTACGA---------TGGCCAGCAGCAGC.................................................2111.00100000000000100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA---G------CAGCAG---CAGCAGTA..........................................................................................18200.05100000000001000000
droSec2
TCT-----ATCTCCAACATATTC--TATCTATTGTATCTACATC----C---------------------------------------AATGTGAA------------------------TGTGTC--------------GTAT-GCACCTCCCAA-------------------CCAAC--------------AAA----ACAC----CACCCATCTA-CGAATTTAAAT-------CATA---ACCTGT---GACCG-------AAAC-CCATGTCG--AACATGCATGTTGGCACCACCAAA----------------CACCAC-TGCACC-------------------------------A--------------------------------------------ATGCACCAA--TGCACCACTGCA-------------CCACCGGTTGAATCTCAGCA---G------CAGCAG---CAGCAGTACGGTGC------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................................................................................AATGTGAA------------------------TGTGTC--------------GTAT-GCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020200
..........................................TC----C---------------------------------------AATGTGAA------------------------TGTGTC--------------GTAT-GCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000
.................................................................................................................................................................................................................................................A---ACCTGT---GACCG-------AAAC-CCATGTCG--..............................................................................................................................................................................................................................................................................................................2411.0010001
.........................................................................................ATGTGAA------------------------TGTGTC--------------GTAT-GCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
........................................................................................AATGTGAA------------------------TGTGTC--------------GTAT-GCACCTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---G------CAGCAG---CAGCAGTACGGT......................................................................................2011.0011000
...............................................................................................................................................................................................................................................................ACCG-------AAAC-CCATGTCG--AACA..........................................................................................................................................................................................................................................................................................................2011.0010100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGGTTGAATCTCAGCA---G------CAGCAG---C.................................................................................................2611.0011000
.....................................................................................................................................................................................................................................................ACCTGT---GACCG-------AAAC-CCATGTCG--..............................................................................................................................................................................................................................................................................................................2311.0010100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTTGAATCTCAGCA---G------CAGCAG---C.................................................................................................2411.0011000
.....................................................................................................................................................................................................................................................ACCTGT---GACCG-------AAAC-CCATGTCG--AA............................................................................................................................................................................................................................................................................................................2511.0011000
........................................................................................................................................................................................................................................................TGT---GACCG-------AAAC-CCATGTCG--AACA..........................................................................................................................................................................................................................................................................................................2411.0010100
.........................................................................................ATGTGAA------------------------TGTGTC--------------GTAT-G.....................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001
......................................TACATC----C---------------------------------------AATGTGAA------------------------TGTGTC--------------GTAT-G.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000
..................................................................................................................................................................................................................................................................................TGTCG--AACATGCATGTTGGCACCAC..........................................................................................................................................................................................................................................................................................2511.0010100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACCGGTTGAATCTCAGCA---..................................................................................................................2011.0010100
...........................................................................................................................................................................................................................................................................................CATGCATGTTGGCACCACCA........................................................................................................................................................................................................................................................................................2011.0010001
droYak3
TCT-----ATCTCCAACATATTC--TATCT-GTCTGTCCACATG----C---------------------------------------AATGTGAA------------------------TGTGTC--------------GTAT-GCACCTCCCAA-------------------CCAAC--------------AAA----ACAC----CAC-------------TCAAAT-------CATT---ACCTGT---GATCG-------CAAC-CCATGTCA--AACATGCATCTTGGCACCACCCAACTTCAATGCACCACCACTGCACC-------A--------------ATGCACCACTGCACCACTGCACCAATGCA-CCACTGCTCCA-------------------CTGCACCAC--TGCTCCACTGCA-------------CCACCGATTAAATATGAGCA---G------CAGCAG-------------------------------------------------------------------------------------------------CAGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................................................................................................................................................................................................................................TGT---GATCG-------CAAC-CCATGTCA--..............................................................................................................................................................................................................................................................................................................2015.00500000050000
..................................................................................................................................................................................................................AC-------------TCAAAT-------CATT---ACCTGT---GATCG-------CAAC-CC......................................................................................................................................................................................................................................................................................................................2912.00220000000000
..............................................................................................AA------------------------TGTGTC--------------GTAT-GCACCTCCCAA-------------------CCAAC--------------.....................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
......................................................................................................................................................................................................................................T-------CATT---ACCTGT---GATCG-------CAAC-CC......................................................................................................................................................................................................................................................................................................................2211.00110000000000
..........................................................................................................................................................................................................................................................T---GATCG-------CAAC-CCATGTCA--AA............................................................................................................................................................................................................................................................................................................2011.00101000000000
..........................................TG----C---------------------------------------AATGTGAA------------------------TGTGTC--------------GTAT-GCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
........................................................................................AATGTGAA------------------------TGTGTC--------------GTAT-GC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................C--TGCTCCACTGCA-------------CCACCG...................................................................................................................................1911.00100001000000
...............................................................................................................................................................................................................................................ATT---ACCTGT---GATCG-------CAAC-........................................................................................................................................................................................................................................................................................................................1811.00110000000000
......................................................................................................................................................................................................................................T-------CATT---ACCTGT---GATCG-------CAAC-C.......................................................................................................................................................................................................................................................................................................................2111.00110000000000
........................................................................................AATGTGAA------------------------TGTGTC--------------GTAT-GCACCTCCCA............................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
..................................................................................................................................................................................................................AC-------------TCAAAT-------CATT---ACCTGT---GATCG-------CA...........................................................................................................................................................................................................................................................................................................................2511.00101000000000
.....................................................................................................................................................................................................................................................................................................GGCACCACCCAACTTCAATGC.............................................................................................................................................................................................................................................................................2111.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCGATTAAATATGAGCA---G------C..........................................................................................................2111.00100000010000
..................TATTC--TATCT-GTCTGTCCACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001000000
........................................................................................AATGTGAA------------------------TGTGTC--------------GTAT-GCACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
........................................................................................................................................................................................................................................................TGT---GATCG-------CAAC-CCATGTCA--AACA..........................................................................................................................................................................................................................................................................................................2411.00100000010000
..........................ATCT-GTCTGTCCACATG----C---------------------------------------A..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
..............................................................................................................................................................................................................................................................................................................CAACTTCAATGCACCACCAC.....................................................................................................................................................................................................................................................................2011.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGATTAAATATGAGCA---G------CAGC.......................................................................................................2311.00100000010000
.............................................................................................GAA------------------------TGTGTC--------------GTAT-GCACCTCCCAA-------------------CCA.....................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGATTAAATATGAGCA---G------CAGC.......................................................................................................2211.00100000010000
...............................................................................................................................................................................................................................................................ATCG-------CAAC-CCATGTCA--AACATGCATCT...................................................................................................................................................................................................................................................................................................2711.00101000000000
............................................................................................TGAA------------------------TGTGTC--------------GTAT-GCACCTCCCAA-------------------CCA.....................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
........................................................................................................................................................................................................................................................TGT---GATCG-------CAAC-CCATGTCA--AA............................................................................................................................................................................................................................................................................................................2211.00100000010000
droEre2
TCT-----ATCTCCAACATATTC--TATCT-GTCTGTCCACATG----C---------------------------------------AATGTGAA------------------------TGTGTC--------------GTAT-GCACCTCCCAA-------------------CCAAC--------------AAA----ACAC----CGCCCATCTA-CGAAACCAAAT-------CATA---ACCTGT---GATCG-------AAAC-CCATGTCA--AACATGCATGTTGG-GCCACCAAA----------------CACCAC-TGCACC-------------------------------A--------------------------------------------CTGCACCAA--TGCACCACTGCA-------------CCACCGATTGAATATCAGCA---GCAGCAACAGCAG---CAGCAGTACGGTGCTCCGTCTTACGA---------TGGCCAGCAG----------------------------------------------------CSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGAATATCAGCA---GCAGCAAC..........................................................................................................2315.0052000120
..........................................TG----C---------------------------------------AATGTGAA------------------------TGTGTC--------------GTAT-GCACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0022000000
.........................TATCT-GTCTGTCCACATG----C---------------------------------------AAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0021000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACGGTGCTCCGTCTTACGA---------TGGCC..........................................................2612.0022000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG---CAGCAGTACGGTGCTCC.................................................................................2212.0020000020
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGAATATCAGCA---GCAGCAACAGC.......................................................................................................2612.0021000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAG---CAGCAGTACGGTGCT...................................................................................2111.0010000100
....................................................................................................................................................................................................................................AAT-------CATA---ACCTGT---GATCG-------AAAC-........................................................................................................................................................................................................................................................................................................................2211.0010010000
.........................................................................................................................................................................................................................................................................................AACATGCATGTTGG-GCCACCAAA----------------C.....................................................................................................................................................................................................................................................................2411.0011000000
..................................................................................................................................................................................................................................................................................TGTCA--AACATGCATGTTGG-GCCACCA........................................................................................................................................................................................................................................................................................2611.0011000000
........................................................................................................................TGTGTC--------------GTAT-GCACCTCCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
.............................................................................................GAA------------------------TGTGTC--------------GTAT-GCACCTCCCA............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAG---CAGCAGTACGGTGCTC..................................................................................2611.0011000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGATTGAATATCAGCA---GCAGCA............................................................................................................2411.0010010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTACGA---------TGGCCAGCAG----------------------------------------------------C2011.0010000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGAATATCAGCA---GCAGC.............................................................................................................2011.0010000010
...........................................................................................GTGAA------------------------TGTGTC--------------GTAT-GCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
........................................................................................................................TGTGTC--------------GTAT-GCACCTCCCAA-------------------C.......................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGTACGGTGCTCCG................................................................................1811.0011000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAG---CAGCAGTACGGT......................................................................................2011.0010000010
......................................................................................................................................................................................................................................................................................A--AACATGCATGTTGG-GCCACCA........................................................................................................................................................................................................................................................................................2211.0011000000
..............AACATATTC--TATCT-GTCTGTCCACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTACGA---------TGGCCAGCAG----------------------------------------------------C1911.0011000000
................................................................................................................................................................................................................................................TA---ACCTGT---GATCG-------AAAC-CCATGTCA--..............................................................................................................................................................................................................................................................................................................2511.0010000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGATTGAATATCAGCA---GCAGCAAC..........................................................................................................2511.0010000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGTACGGTGCTCCGTCTT............................................................................2211.0010000010
.................................................................................................................................................................................................................................................................................ATGTCA--AACATGCATGTTGG-GCCACC.........................................................................................................................................................................................................................................................................................2611.0011000000
......................................................................................................................................................................................................................ATCTA-CGAAACCAAAT-------CATA---ACCTGT---GAT......................................................................................................................................................................................................................................................................................................................................2911.0011000000
.................................................................................................................................................................................................................................................................................ATGTCA--AACATGCATGTTGG-GCCACCA........................................................................................................................................................................................................................................................................................2711.0011000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGATTGAATATCAGCA---GC................................................................................................................2011.0010000010
...........TCCAACATATTC--TATCT-GTCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
.........................................................................................ATGTGAA------------------------TGTGTC--------------GTAT-GCACCT................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
........................................CATG----C---------------------------------------AATGTGAA------------------------TGTGTC--------------GTAT-G.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCTTACGA---------TGGCCAGCA......................................................1911.0010000010
.........................................................................................ATGTGAA------------------------TGTGTC--------------GTAT-GCACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAG---CAGCAGTACGGTGCTC..................................................................................2511.0011000000
........................................................................................................................................................................................................................................................TGT---GATCG-------AAAC-CCATGTC.................................................................................................................................................................................................................................................................................................................1911.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAATATCAGCA---GCAGCAACA.........................................................................................................2311.0010000100
........................................................................................................................................................................................................................................................TGT---GATCG-------AAAC-CCATGTCA--..............................................................................................................................................................................................................................................................................................................2011.0010000100
...........................................................................................................................................................A-------------------CCAAC--------------AAA----ACAC----CGCCCATCTA-CG.........................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
...........................................................................................................................GTC--------------GTAT-GCACCTCCCAA-------------------CC......................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
.................................................................................................................................................................................................................................................................................................TGTTGG-GCCACCAAA----------------CACCAC-TGCACC-------------------------------..........................................................................................................................................................................................................................2711.0011000000
.....................................................................................................................................................................................................................................................ACCTGT---GATCG-------AAAC-CCATGTC.................................................................................................................................................................................................................................................................................................................2211.0010000100
...........................................................................................................................................................................................................................................................................................CATGCATGTTGG-GCCACCA........................................................................................................................................................................................................................................................................................1911.0011000000
.........................................................................................ATGTGAA------------------------TGTGTC--------------GTAT-GCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCTTACGA---------TGGCCAGC.......................................................1811.0011000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGAATATCAGCA---GCAGCA............................................................................................................2111.0010000010
.................................................................................................................................................................................................................................................................................................TGTTGG-GCCACCAAA----------------CACCAC-T..............................................................................................................................................................................................................................................................2211.0011000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATTGAATATCAGCA---GCAGCAAC..........................................................................................................2411.0010000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGTACGGTGCTCCGTCTTACGA---------T..............................................................2711.0011000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTACGGTGCTCCGTCTTACGA---------TGT............................................................2611.0010001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCGATTGAATATCAGCA---GCA...............................................................................................................2211.0011000000
.............................................................................................................................................................................................................................................................................................TGCATGTTGG-GCCACCAAA----------------CACC..................................................................................................................................................................................................................................................................2311.0011000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCAGCA---GCAGCAACAGCA......................................................................................................2011.0010000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAG---CAGCAGTACGGT......................................................................................2311.0010000010
...........................................................................................GTGAA------------------------TGTGTC--------------GTAT-GCACCTCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
....................................................................................................................................................................................................A----ACAC----CGCCCATCTA-CGA........................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
...............................................................................................................................................................................................................................AACCAAAT-------CATA---ACCTGT---GATCG-------AA...........................................................................................................................................................................................................................................................................................................................2511.0011000000
..........................................TG----C---------------------------------------AATGTGAA------------------------TGTGTC--------------GTAT-GCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
.........................................................................................................................................................................................................................................................................................AACATGCATGTTGG-GCCACCAAA----------------CACC..................................................................................................................................................................................................................................................................2711.0011000000
.............................................................................................................................................................................................................................................................................................TGCATGTTGG-GCCACCAAA----------------CACCA.................................................................................................................................................................................................................................................................2411.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG---CAGCAGTACGGTGCTC..................................................................................2011.0010001000
.................................................................................................................................................................................................................................................A---ACCTGT---GATCG-------AAAC-CCA.....................................................................................................................................................................................................................................................................................................................1911.0010000010
....................................................................................................................................................................................................................................AAT-------CATA---ACCTGT---GATCG-------A............................................................................................................................................................................................................................................................................................................................1911.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAGCAG---CAGCAGTACGGT......................................................................................2511.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAGCAG---CAGCAGT...........................................................................................2090.1110100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCA---GCAGCAACAGCAG---CA................................................................................................22110.0910001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAG---CAGCAGT...........................................................................................18190.0511000000

Generated: 06/08/2015 at 04:53 PM