ID:

dpe_192

 Coordinate:

scaffold_28:68770-68845 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-37.9 -37.7 -37.6 -37.4

Flybase annnotation

Antisense to exon [dper_GLEANR_16141:1]; Antisense to CDS [Dper\GL15197-cds]

Repeatable elements

NameClassFamilyStrand
Gypsy8-I_Dpse-intLTRGypsy+
mature
  1. dpe_192  scaffold_28:68771-68795 -
  2. scaffold_3840:110-134 -
  3. scaffold_330:50695-50719 -
star
  1. dpe_192  scaffold_28:68809-68831 -
  2. scaffold_3840:148-170 -
  3. scaffold_330:50733-50755 -

Sense Strand Reads

CGGGTCAGCCACTGCCTCGGCCTTCGCCGTGTCTGCCGCCGCCTCGTCCGCCGCTGCCTCGGCCTTCGCCGCCTGGGCCGCCGTCGCTGCCGCCGTCGTCGCCATTCCTGCCGCTGAGGTCGTGGGGGCAGGTCTGGGGTTTCTCCTCCGCGGGTCCCTGTCATTACTGCCGAGTG
*************************************************((..((((((..((((((((.((((.(((.((.......((.((....)).)).......)).))).)))).))))))))))))..)).))************************************ 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V042
embryo
 M021
embryo
 V111
male body		 V057
head
....................................................................................................GCCATTCCTGCCGCTGAGGTCGTGG................................................... 25 0 3 136.67 410 372 30 0 8 0
....................................................................................................GCCATTCCTGCCGCTGAGGTCGTG.................................................... 24 0 3 39.67 119 116 1 0 1 1
....................................................................................................GCCATTCCTGCCGCTGAGGTCGTGGG.................................................. 26 0 3 19.33 58 58 0 0 0 0
....................................................................................................GCCATTCCTGCCGCTGAGGTCGT..................................................... 23 0 3 19.33 58 53 2 3 0 0
....................................................................................................GCCATTCCTGCCGCTGAGGTCG...................................................... 22 0 3 18.00 54 54 0 0 0 0
....................................................................................................GCCATTCCTGCCGCTGAGGTCGTGGGG................................................. 27 0 3 9.33 28 27 0 0 1 0
....................................................................................................GCCATTCCTGCCGCTGAGGTC....................................................... 21 0 3 9.00 27 27 0 0 0 0
.....................................................................................................CCATTCCTGCCGCTGAGGTCGTGG................................................... 24 0 3 6.00 18 18 0 0 0 0
....................................................................................................GCCATTCCGGCCGCTGAGGTCGTGG................................................... 25 1 3 4.00 12 12 0 0 0 0
....................................................................................................GCCATTCCTGCCGCTGAGGT........................................................ 20 0 3 3.67 11 11 0 0 0 0
....................................................................................................GCCATTCCTGCCGCTGCGGTCGT..................................................... 23 1 7 3.43 24 18 1 5 0 0
....................................................................................................GCCATTCCTGCCGCTGAGG......................................................... 19 0 3 2.67 8 8 0 0 0 0
...........................................................................................................CTGCGGCTTAAGTCGTGGG.................................................. 19 3 20 2.40 48 40 0 0 1 7
....................................................................................................GCCATTCCGGCCGCTGAGGTCGTG.................................................... 24 1 3 2.33 7 7 0 0 0 0
.....................................................................................................CCATTCCTGCCGCTGAGGTCGTG.................................................... 23 0 3 2.00 6 6 0 0 0 0
....................................................................................................GCCATTCCAGCCGCTGAGGTCGTGG................................................... 25 1 3 2.00 6 6 0 0 0 0
................TCGGCCTTCGCCGTGTCTGCCG.......................................................................................................................................... 22 0 5 1.80 9 9 0 0 0 0
.....................................GCCGCCTCGTCCGCCGCTGCCTC.................................................................................................................... 23 0 3 1.67 5 5 0 0 0 0
.....................................................................................................CCATTCCTGCCGCTGAGGTCGT..................................................... 22 0 3 1.67 5 5 0 0 0 0
..................................................................................................TCGCCATTCCTGCCGCTGAGGTCG...................................................... 24 0 3 1.67 5 4 1 0 0 0
.....................................................................................................CCATTCCTGCCGCTGAGGTCGTGGG.................................................. 25 0 3 1.33 4 4 0 0 0 0
....................................................................................................................................TCTGGGGTTTCTCCTCCGCGGGTC.................... 24 0 3 1.33 4 3 0 1 0 0
.....................................................................................................CCATTCCTGCCGCTGAGGTCG...................................................... 21 0 3 1.33 4 4 0 0 0 0
....................................................................................................GCCATTCCAGCCGCTGAGGTCG...................................................... 22 1 3 1.33 4 4 0 0 0 0
..................................................................................................TCGCCATTCCTGCCGCTGAGGTCGTGG................................................... 27 0 3 1.33 4 4 0 0 0 0
.....................................GCCGCCTCGTCCGCCGCTGCCT..................................................................................................................... 22 0 3 1.33 4 4 0 0 0 0
.....................................GCCGCCTCGTCCGCCGCTGCCTCGG.................................................................................................................. 25 0 3 1.33 4 4 0 0 0 0
........................................................................................................TTCCTGCCGCTGAGGTCGTGG................................................... 21 0 3 1.33 4 4 0 0 0 0
....................................................................................................GCCATTCCGGCCGCTGAGGTCGT..................................................... 23 1 3 1.33 4 4 0 0 0 0
.................CGGCCTTCGCCGTGTCTGCCG.......................................................................................................................................... 21 0 5 1.20 6 5 1 0 0 0
........................................................................................................TTCCTGCCGCTGAGGTCGTGGGG................................................. 23 0 3 1.00 3 3 0 0 0 0
......................................................................................................................................TGGGGTTTCTCCTCCGCGGGTCC................... 23 0 4 1.00 4 4 0 0 0 0
........................................................................................................TTCCTGCCGCTGAGGTCGTGGGGG................................................ 24 0 3 1.00 3 3 0 0 0 0
.....................................GCCGCCTCGTCCGCCGCTGCCTCG................................................................................................................... 24 0 3 1.00 3 3 0 0 0 0
...............................................................................................................................GCAGGTCTGGGGTTTCTCCTCC........................... 22 0 2 1.00 2 2 0 0 0 0
....................................................................................................GCCATTCCCGCCGCTGAGGTCGTGG................................................... 25 1 3 1.00 3 3 0 0 0 0
..................................................................................................TCGCCATTCCTGCCGCTGAGGTCGTG.................................................... 26 0 3 1.00 3 2 0 1 0 0
....................................................................................................GCCATTCCGGCCGCTGAGGTCGTGGG.................................................. 26 1 3 1.00 3 3 0 0 0 0
......................................................................................................................................TGGGGTTTCTCCTCCGCGGGT..................... 21 0 4 1.00 4 3 1 0 0 0
...............................................................................................................................GCAGGTCTGGGGTTTCTCCTCCG.......................... 23 0 2 1.00 2 2 0 0 0 0
................TCGGCCTTCGCCGTGTCTGCCGCCG....................................................................................................................................... 25 0 3 1.00 3 3 0 0 0 0
................................................................TTCGCCGCCTGGGCCGCCGTCGC......................................................................................... 23 0 3 1.00 3 3 0 0 0 0
....................................................................................................................................TCTGGGGTTTCTCCTCCGCGG....................... 21 0 3 1.00 3 3 0 0 0 0
................................................................................................................................CAGGTTTGGGGTTTCTCCTCCGC......................... 23 1 3 1.00 3 3 0 0 0 0
................TCGGCCTTCGCCGTGTCTGCCGC......................................................................................................................................... 23 0 4 0.75 3 3 0 0 0 0
...................................................................GCCGCCTGGGCCGCCGTCGCTG....................................................................................... 22 0 4 0.75 3 3 0 0 0 0
....................................................................................................GCCATTCCTGCCGCTGTGGTCGT..................................................... 23 1 4 0.75 3 2 1 0 0 0
...................................................................................................CGCCATTCCTGCCGCTGAGGTCGTGGG.................................................. 27 0 3 0.67 2 2 0 0 0 0
..........................................................TCGGCCTTCGCCGCCTGGGCCGCCG............................................................................................. 25 0 3 0.67 2 2 0 0 0 0
......................................................................................................CATTCCTGCCGCTGAGGTCGTGG................................................... 23 0 3 0.67 2 2 0 0 0 0
.......................TCGCCGTGTCTGCCGCCGCCTCGT................................................................................................................................. 24 0 3 0.67 2 2 0 0 0 0
.............................TGTCTGCCGCCGCCTCGTC................................................................................................................................ 19 0 3 0.67 2 2 0 0 0 0
.....................................GCCGCCTCGTCCGCCGCT......................................................................................................................... 18 0 3 0.67 2 2 0 0 0 0
....................................................................................................GCCATTCCAGCCGCTGAGGTCGTG.................................................... 24 1 3 0.67 2 2 0 0 0 0
......................TTCGCCGTGTCTGCCGCCGCCT.................................................................................................................................... 22 0 3 0.67 2 2 0 0 0 0
.....................................GCTGCCTCGTCCGCCGCTGCCTCG................................................................................................................... 24 1 3 0.67 2 2 0 0 0 0
......................TTCGCCGTGTCTGCCGCCG....................................................................................................................................... 19 0 3 0.67 2 2 0 0 0 0
.................................TGCCGCCGCCTCGTCCGCCG........................................................................................................................... 20 0 3 0.67 2 0 0 2 0 0
....................................................GCTGCCTCGGCCTTCGCCGCCTG..................................................................................................... 23 0 3 0.67 2 2 0 0 0 0
.....................................GCCGCCTCGTCCGCCGCTG........................................................................................................................ 19 0 3 0.67 2 2 0 0 0 0
....................................................................................................GCCATTCCTGCCGCTGAGGTCGTGT................................................... 25 1 3 0.67 2 2 0 0 0 0
......................................................TGCCTCGGCCTTCGCCGCCTGG.................................................................................................... 22 0 3 0.67 2 2 0 0 0 0
.................................TGCCGCCGCCTCGTCCGCCGCTG........................................................................................................................ 23 0 3 0.67 2 2 0 0 0 0
.........................................................................................................TCCTGCCGCTGAGGTCGTGGGGG................................................ 23 0 3 0.67 2 2 0 0 0 0
.................CGGCCTTCGCCGTGTCTGCCGCCG....................................................................................................................................... 24 0 3 0.67 2 1 1 0 0 0
.........................GCCGTGTCTGCCGCCGCCTCGTCC............................................................................................................................... 24 0 3 0.67 2 2 0 0 0 0
...................................................................................................CGCCATTCCTGCCGCTGAGGTCGTGG................................................... 26 0 3 0.67 2 2 0 0 0 0
....................................................................................................GCCATTCCTGCCGCTGAGGTCGG..................................................... 23 1 3 0.67 2 0 0 2 0 0
....................................................................................................GCCATTCCGGCCGCTGAGGTC....................................................... 21 1 3 0.67 2 2 0 0 0 0
....................................................................................................GCCATTCCTGCCGCTGAGGTCGTT.................................................... 24 1 3 0.67 2 1 1 0 0 0
.............................TGTCTGCCGCCGCCTCGTCCG.............................................................................................................................. 21 0 3 0.67 2 1 1 0 0 0
....................................................................................................GCCATTCCTACCGCTGAGGTCGTGG................................................... 25 1 3 0.67 2 2 0 0 0 0
..................................................................................................................................................TCCGCGGGTCCCTGTCGTTACTG....... 23 1 7 0.57 4 0 0 4 0 0
....................................................................................................GCCATTCCTGCCGCTGCGGTCGTT.................................................... 24 2 7 0.57 4 1 0 3 0 0
...............................................................................................................................GCAGGTCTGGGGTTTCTCC.............................. 19 0 2 0.50 1 1 0 0 0 0
...............................................................................................................................GCAGGTCTGGGGTTTCTCCCCCG.......................... 23 1 2 0.50 1 1 0 0 0 0
.......................................................................................................................................................GGGTCCCTGTCATTACTGCCGAGTG 25 0 2 0.50 1 1 0 0 0 0
.......................................................................................................................TCGCGGGGGCAGGTCTGGGG..................................... 20 1 2 0.50 1 1 0 0 0 0
.......................................................................................................................TCGCGGGGGCAGGTCTGG....................................... 18 1 2 0.50 1 1 0 0 0 0
........................................................................................................................................................GGTCCCTGTCATTACTGCCGA... 21 0 2 0.50 1 1 0 0 0 0
...............................................................................................................................GCAGGTCTGGGGTTTCTCCTCCGCGG....................... 26 0 2 0.50 1 1 0 0 0 0
......................................................................................................................................TGGGGTTTCTCCTCCGCGGG...................... 20 0 4 0.50 2 2 0 0 0 0
......................................................................................................................................TGGGGTTTCTCCTCCGCGGGTC.................... 22 0 4 0.50 2 2 0 0 0 0
..................................................................................................................................................TCCGCGGGTCCCTGTCATTACTTCCGA... 27 1 2 0.50 1 1 0 0 0 0
....................................................................................................GCCATTCCTGCCGCTGAGGTCGC..................................................... 23 1 5 0.40 2 2 0 0 0 0
....................................................................................................GCCATTCCTGCCGCTGAGA......................................................... 19 1 5 0.40 2 2 0 0 0 0
..................................................CCGCTGCCTCGGCCTTCGCCGC........................................................................................................ 22 0 3 0.33 1 1 0 0 0 0
....................................................................................................GTCATTCCTGCCGCTGAGGTCGTGG................................................... 25 1 3 0.33 1 1 0 0 0 0
....................................................................................................GCCATTCCCGCCGCTGAGGTCGT..................................................... 23 1 3 0.33 1 1 0 0 0 0
................................................................TTCGCCGCCTGGGCCGCCGT............................................................................................ 20 0 3 0.33 1 1 0 0 0 0
........................................................................................................TTCCTGCCGCTGAGGTCGTGGGA................................................. 23 1 3 0.33 1 0 1 0 0 0
...................................................................................................CGCCATTCCTGCCGCTGAGGTCG...................................................... 23 0 3 0.33 1 0 1 0 0 0
.....................................GCCGCCTCGTCCGCCGCTGCCTCGGC................................................................................................................. 26 0 3 0.33 1 1 0 0 0 0
....................................................................................................GCCATTCCTGCCGCTGAGGTCGTGA................................................... 25 1 3 0.33 1 1 0 0 0 0
....................................................................................................GCCATCCCTGCCGCTGAGGTCGT..................................................... 23 1 3 0.33 1 1 0 0 0 0
.....................................TCCGCCTCGTCCGCCGCTGCC...................................................................................................................... 21 1 3 0.33 1 1 0 0 0 0
....................................................................................................GCCATTCCTGCCGCTGAG.......................................................... 18 0 3 0.33 1 1 0 0 0 0
......................................................TGCCTCGGCCTTCGCCGCCTG..................................................................................................... 21 0 3 0.33 1 1 0 0 0 0
.........................GCCTTGTCTGCCGCCGCCTCG.................................................................................................................................. 21 1 3 0.33 1 1 0 0 0 0
..................................................CCGCTGCCTCGGCCTTCGCCGCCT...................................................................................................... 24 0 3 0.33 1 1 0 0 0 0
.........................GCCGTGTCTGCCGCCGACTCGT................................................................................................................................. 22 1 3 0.33 1 0 1 0 0 0
.....................................GCCGCCTCGTCCGCCGCTGCC...................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0
......................................................TGCCTCGGCCTTCGCCGCCTGGGAA................................................................................................. 25 2 3 0.33 1 1 0 0 0 0
........................CGCCGTGTCTGCCGCCGCCTCGTCC............................................................................................................................... 25 0 3 0.33 1 1 0 0 0 0
.........................................CCTCGTCCGCCGCTGCCTCGGC................................................................................................................. 22 0 3 0.33 1 1 0 0 0 0
......................TTCGCCGTGTCTGCCGCCGC...................................................................................................................................... 20 0 3 0.33 1 1 0 0 0 0
.....................................GCTGCCTCGTCCGCCGCTG........................................................................................................................ 19 1 3 0.33 1 1 0 0 0 0
................................................................TTCGCCGCCTGGGCCGCCGTC........................................................................................... 21 0 3 0.33 1 1 0 0 0 0
....................................................................................................ACCATTCCTGCCGCTGAGGTCGTGG................................................... 25 1 3 0.33 1 1 0 0 0 0
.....................................................................................................................................CTGGGGTTTCTCCTCCGCGGGT..................... 22 0 3 0.33 1 1 0 0 0 0
....................................................................................................................................TCTGGGGTTTCTCCTCCGCGGGT..................... 23 0 3 0.33 1 1 0 0 0 0
...................................................................................................GGCCATTCCTGCCGCTGAGGTCGTGG................................................... 26 1 3 0.33 1 1 0 0 0 0
....................................................................................................GCCATTCCTTCCGCTGAGGTCGTGGG.................................................. 26 1 3 0.33 1 1 0 0 0 0
................................................................TTCGCCGCCTGGGCCGCCGTCGCTT....................................................................................... 25 1 3 0.33 1 0 0 1 0 0
...............................................CCGCCGCTGCCTCGGCCTTCGCCGC........................................................................................................ 25 0 3 0.33 1 1 0 0 0 0
....................................................................................................GCCATTCCGGCCGCTGAGGTCTT..................................................... 23 2 3 0.33 1 1 0 0 0 0
....................................................................................................GCCATTCCTGCCGCTGAGGCCGTGG................................................... 25 1 3 0.33 1 1 0 0 0 0
...................................................................................................CGCCATTCCTGCCGCTGAGGTC....................................................... 22 0 3 0.33 1 1 0 0 0 0
....................................................................................................GCCATTCCTGCCGCTGAGGTCA...................................................... 22 1 3 0.33 1 1 0 0 0 0
......................................................................................................CATTCCTGCCGCTGAGGTCGT..................................................... 21 0 3 0.33 1 1 0 0 0 0
......................................CCGCCTCGACCGCCGCTGCCTCGGCCT............................................................................................................... 27 1 3 0.33 1 1 0 0 0 0
.............................................GTCCGCCGTTGCCTCGGCCTTCGCCGCC....................................................................................................... 28 1 3 0.33 1 1 0 0 0 0
.........................................CCTCGTCCGCCGCTGCCTCGGCCT............................................................................................................... 24 0 3 0.33 1 1 0 0 0 0
..................................................................................................TCGCCATTCCTGCCGCTGAGGTCGTGT................................................... 27 1 3 0.33 1 1 0 0 0 0
................................................................................................................................CAGGTTTGGGGTTTCTCCTCCG.......................... 22 1 3 0.33 1 1 0 0 0 0
....................................................................................................GCCATTCCTGCCGCTGAGGTCGTGAAA................................................. 27 3 3 0.33 1 1 0 0 0 0
................................................................................................................................CAGGTTTGGGGTTTCTCCTCCGCGGGT..................... 27 1 3 0.33 1 1 0 0 0 0
....................................................................................................................................TCTGGGGTTTCTCCTCCGCGGG...................... 22 0 3 0.33 1 1 0 0 0 0
....................................................................................................GCCATTCCTGCCGCTGAGGTCGTGGC.................................................. 26 1 3 0.33 1 1 0 0 0 0
.................................................................................................GTCGCCATTCCTGCCGCTGAGGTC....................................................... 24 0 3 0.33 1 1 0 0 0 0
.................................TGCCGCCGACTCGTCCGCCGCTG........................................................................................................................ 23 1 3 0.33 1 1 0 0 0 0
....................................................................................................................................TCTGGGGTGTCTCCTCCGCGGGTCC................... 25 1 3 0.33 1 1 0 0 0 0
................................................................TTCGCCATCTGGGCCGCCTTCGCTG....................................................................................... 25 3 3 0.33 1 1 0 0 0 0
...............................TCCGCCGCTGCCTCGTCCGCCGCTG........................................................................................................................ 25 2 3 0.33 1 0 0 1 0 0
.....................................GCCGCCTCGTCCGCCGCTGCCTCGGCCT............................................................................................................... 28 0 3 0.33 1 1 0 0 0 0
........................................GCCTCGTCCGCCGCTGCCTCG................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0
................................................................................................CGTCGCCATTCCTGCCGCTGAG.......................................................... 22 0 3 0.33 1 1 0 0 0 0
.........................GCCGTGTCTGCCGCCGCCTCGT................................................................................................................................. 22 0 3 0.33 1 0 1 0 0 0
.......................................................GCCTCGGCCTTCGCCGCCTG..................................................................................................... 20 0 3 0.33 1 1 0 0 0 0
.....................................GCCGCCTCGTCCGCCGCTA........................................................................................................................ 19 1 3 0.33 1 1 0 0 0 0
.........................GCCGTGTCGGCCGCCGCCTCGTCC............................................................................................................................... 24 1 3 0.33 1 1 0 0 0 0
....................................................................................................................................TCTGGGGGTTCTCCTCCGCGGGGT.................... 24 3 3 0.33 1 1 0 0 0 0
......................TTCGCCGTGTCTGCCGCCGCCTCG.................................................................................................................................. 24 0 3 0.33 1 1 0 0 0 0
....................................................................................................GCCATTCCGGCCGCTGAGGTCG...................................................... 22 1 3 0.33 1 1 0 0 0 0
.......................................................GCCTCGGCCTTCGCCGCCT...................................................................................................... 19 0 3 0.33 1 1 0 0 0 0
................TCGGCCTTCGCCGTGTCTGCCGCC........................................................................................................................................ 24 0 3 0.33 1 1 0 0 0 0
......................................................................................................CATTCCTGCCGCTGAGGTCGTG.................................................... 22 0 3 0.33 1 1 0 0 0 0
.............................................................................................CGTCGTCGCCATTCCTGCCGCTGAGG......................................................... 26 0 3 0.33 1 1 0 0 0 0
..................................................................................................TCGCCATTCCTGCCGCTGAGGTT....................................................... 23 1 3 0.33 1 1 0 0 0 0
....................................................................................................GCCATTCCAGCCGCTGAGGTCGTGGG.................................................. 26 1 3 0.33 1 1 0 0 0 0
.........................GCCGTGTCTGCCGCCGCCTCGTCCGCC............................................................................................................................ 27 0 3 0.33 1 1 0 0 0 0
...................................................................................................CGCCATTCCTGCCGCTGAGGTCGTG.................................................... 25 0 3 0.33 1 1 0 0 0 0
.....................................GCCGCCTCGTCCGCCGCTGCAA..................................................................................................................... 22 2 3 0.33 1 1 0 0 0 0
....................................................................................................................................TCTGGGGTTTCTCCTCCGCGGGTCC................... 25 0 3 0.33 1 1 0 0 0 0
......................TTCGCCGTGTCTGCCGCCGT...................................................................................................................................... 20 1 3 0.33 1 1 0 0 0 0
...................................................................................................TGCCATTCCTGCCGCTGAGGTCGTGG................................................... 26 1 3 0.33 1 1 0 0 0 0
....................................................................................................GCCATTCCTGCCGCTGGGGTCGTG.................................................... 24 1 3 0.33 1 1 0 0 0 0
....................................................................................................GCCATTCCCGCCGCTGAGGT........................................................ 20 1 3 0.33 1 1 0 0 0 0
...........................................TCGTCCGCCGCTGCCTCGG.................................................................................................................. 19 0 3 0.33 1 1 0 0 0 0
...............................TCTGCCGCCGCCTCGTCCG.............................................................................................................................. 19 0 3 0.33 1 1 0 0 0 0
....................................................................................................GCCATTCCTGCCGCTGAGGTCCTGG................................................... 25 1 3 0.33 1 0 1 0 0 0
.............................TGTCTGCCGCCGCCTCGTCCGCCGT.......................................................................................................................... 25 1 3 0.33 1 1 0 0 0 0
...............................................................................................TCGTCGCCATTCCTGCCGCTGAGGCC....................................................... 26 1 3 0.33 1 0 0 1 0 0
....................................................................................................GCCATTCCTGCCGCTGAGGTCGTGGGC................................................. 27 1 3 0.33 1 0 0 0 1 0
.........................GCCGTGTCTGCCGCCGCCTCG.................................................................................................................................. 21 0 3 0.33 1 1 0 0 0 0
.......................TCGCCGTGTCTGCCGCCGCCT.................................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0
................................................................TTCGCCGCCTGGGCCGCCGTAAA......................................................................................... 23 3 3 0.33 1 1 0 0 0 0
..................................................................................................TCGCCATTCCTGCCGCTGA........................................................... 19 0 3 0.33 1 1 0 0 0 0
....................................................................................................TCCATTCCTGCCGCTGAGGTCGTGG................................................... 25 1 3 0.33 1 1 0 0 0 0
.................................TGCCGCCGACTCGTCCGCCGCT......................................................................................................................... 22 1 3 0.33 1 0 1 0 0 0
.......................TCGCCGTGTCTGCCGCCGCCTCG.................................................................................................................................. 23 0 3 0.33 1 1 0 0 0 0
.........................GCCGTGTCTGCCGCCGCCTCGTA................................................................................................................................ 23 1 3 0.33 1 1 0 0 0 0
.....................................GCTGCCTCGTCCGCCGCTGCCT..................................................................................................................... 22 1 3 0.33 1 1 0 0 0 0
....................................................................................................GCCATTCCTCCCGCTGAGGTCGTGG................................................... 25 1 3 0.33 1 1 0 0 0 0
....................................................................................................GCCATTCCTGCCGCTGAGGGCG...................................................... 22 1 3 0.33 1 1 0 0 0 0
......................................................TGCCTCGGCCTTCGCCGCCT...................................................................................................... 20 0 3 0.33 1 1 0 0 0 0
.....................................................................................................CCATTCCTACCGCTGAGGTCGTG.................................................... 23 1 3 0.33 1 1 0 0 0 0
..............................................TCCGCCGCTGCCTCGGCCTTCGCCGC........................................................................................................ 26 0 3 0.33 1 1 0 0 0 0
.....................................GCTGCCTCGTCCGCCGCTGCCTC.................................................................................................................... 23 1 3 0.33 1 1 0 0 0 0
........................CGCCGTGTCTGCCGCCGCCTCGT................................................................................................................................. 23 0 3 0.33 1 1 0 0 0 0
......................................................TGCCTCGGCCTTCGCCGCCTGGG................................................................................................... 23 0 3 0.33 1 1 0 0 0 0
................TCGGCCTTCGCCGTGTCTGCCGCCGC...................................................................................................................................... 26 0 3 0.33 1 1 0 0 0 0
........................................................................................................TTCCTGCCGCTGAGGTCGTGGG.................................................. 22 0 3 0.33 1 1 0 0 0 0
....................................................................................................GCCATTCCTGCAGCTGAGGGCG...................................................... 22 2 3 0.33 1 0 1 0 0 0
....................................................................................................GCCATTCCTGCCGCTGAGGTCGTTT................................................... 25 2 3 0.33 1 1 0 0 0 0
....................................................................................................................................TCTGGGGTTTCTCCTCCGCGGGTT.................... 24 1 3 0.33 1 1 0 0 0 0
.......................................CGCCTCGTCCGCCGCTGCCTCGG.................................................................................................................. 23 0 3 0.33 1 1 0 0 0 0
..........................................................TCGGCCTTCGCCGCCTGGGTA................................................................................................. 21 2 3 0.33 1 1 0 0 0 0
..........................................................TCGGCCTTCGCCGCCTGGGCCGCA.............................................................................................. 24 1 3 0.33 1 1 0 0 0 0
....................................................................................................CCCATTCCTGCCGCTGAGGTCGT..................................................... 23 1 3 0.33 1 1 0 0 0 0
..............................................TCCGCCGCTGCCTCGGCCTTCGCCGCC....................................................................................................... 27 0 3 0.33 1 1 0 0 0 0
................................................................................................................................CAGGTTTGGGGTTTCTCCT............................. 19 1 3 0.33 1 1 0 0 0 0
.....................................................................................................CCATTCCTGCCGCTGAGGTCGTGGGG................................................. 26 0 3 0.33 1 1 0 0 0 0
......................................................TGCCTCGGGCTTCGCCGCCTGGGCCC................................................................................................ 26 2 3 0.33 1 1 0 0 0 0
....................................................................................................GTCATTCCGGCCGCTGAGGTCGTGG................................................... 25 2 3 0.33 1 1 0 0 0 0
...................................................................................................................................ATCTGGGGTTTCTCCTCCGCGG....................... 22 1 3 0.33 1 1 0 0 0 0
...............................................................................................TCGTCGCCATTCCTGCCGCTGAGG......................................................... 24 0 3 0.33 1 0 1 0 0 0
...........................................................................................................CTGCCGCTGAGGTCGTGG................................................... 18 0 7 0.29 2 2 0 0 0 0
.....................................................................................................CCATTCCTGCCGCTGCGGTCGT..................................................... 22 1 7 0.29 2 2 0 0 0 0
..........................................................................................................................TGGGGGTAGGTCTGGAGT.................................... 18 2 4 0.25 1 0 0 0 0 1
....................................................................................................GCCATTCCCGCCGCTGTGGTCGT..................................................... 23 2 4 0.25 1 1 0 0 0 0
.................................................................TCGCCGCTTGGGCCGCCTTCGCTGC...................................................................................... 25 2 4 0.25 1 1 0 0 0 0
...................................................................GCCGCTTGGGCCGCCTTCGCTG....................................................................................... 22 2 4 0.25 1 1 0 0 0 0
....................................................................................................GCCATTCCTGCCGCTGAAA......................................................... 19 2 8 0.25 2 2 0 0 0 0
.....................................................................................................CCATTCCTGCCGCTGTGGTCGT..................................................... 22 1 4 0.25 1 1 0 0 0 0
.................CGGCCTTCGCCGTGTCTGCCGC......................................................................................................................................... 22 0 4 0.25 1 1 0 0 0 0
....................................................................................................................................TCTGGGGTTTCTCCTCCGCG........................ 20 0 4 0.25 1 1 0 0 0 0
....................................................................................................GCCATTCCTGCCGCTGTGGTCGTT.................................................... 24 2 4 0.25 1 1 0 0 0 0
................TCGGCCTTCGCCGTGTCTGCCGCAG....................................................................................................................................... 25 1 4 0.25 1 1 0 0 0 0
.........................................................................................................TCCTGCCGTTGAGGTCGTGT................................................... 20 2 4 0.25 1 1 0 0 0 0
......................................................................................................................................TGGGGTTTCTCCTCCGCGGGTGC................... 23 1 4 0.25 1 1 0 0 0 0
......................................................................................................................................TGGGGTTTCTCCTCCGCGGGTCAA.................. 24 2 4 0.25 1 1 0 0 0 0
...............................................................................................TCGTCGCCATTCCTGCCGCTGCGG......................................................... 24 1 4 0.25 1 1 0 0 0 0
....................................................................................................GCCATTCCTGCCGCAGAGGTCGTGG................................................... 25 1 4 0.25 1 1 0 0 0 0
......................................................................................................CATTCCTGCCGCTGTGGTCGT..................................................... 21 1 4 0.25 1 1 0 0 0 0
..............................................TCCGCCGCTGCCTCGGCCT............................................................................................................... 19 0 4 0.25 1 1 0 0 0 0
......................................................................................................................................TGGGGTTTCTCCTCCGCGGGTCCCTG................ 26 0 4 0.25 1 1 0 0 0 0
..............................................TCCGCCGCTGCCTCGGCCTTCGT........................................................................................................... 23 1 4 0.25 1 1 0 0 0 0
.................................................................TCGCCGCTTGGGCCGCCTTCG.......................................................................................... 21 2 4 0.25 1 1 0 0 0 0
............................................................................................................................................TTCTCCTCCGCGGGTCCCTGTCA............. 23 0 4 0.25 1 1 0 0 0 0
..................................................................................................TAGCCATTCCTGCCGCTGTGGTCGTA.................................................... 26 3 4 0.25 1 0 0 1 0 0
.................................................................TCGCCGCCTGGGCCGCCGTCGCTG....................................................................................... 24 0 4 0.25 1 1 0 0 0 0
....................................................................................................GCCATTCCTGCAGCTGAGGA........................................................ 20 2 4 0.25 1 0 1 0 0 0
....................................................................................................GCCATTCCTGCCGCCGAGTTCGTG.................................................... 24 2 4 0.25 1 0 1 0 0 0
.....................................................................................................CCATTCCTGCCGCTGTGGTCGTT.................................................... 23 2 4 0.25 1 1 0 0 0 0
...................................................................................TCGCTGCCACCGTCGTCGCCATTCC.................................................................... 25 1 4 0.25 1 1 0 0 0 0
.................................................................TCGCCGCTTGGGCCGCCTTCGC......................................................................................... 22 2 4 0.25 1 1 0 0 0 0
...............................................................................................................................GCCGGTTTGGGGTTTCTCCTCCGCGGG...................... 27 2 4 0.25 1 1 0 0 0 0
..............................................TCCGCCGCTGCCTCGGCCTTCGCC.......................................................................................................... 24 0 4 0.25 1 1 0 0 0 0
............................................................................................CCGTCGTCGCCATTCCTGCCGCTGC........................................................... 25 1 4 0.25 1 1 0 0 0 0
.................................................................TCGCCGCCTGGGCCGCCTTCG.......................................................................................... 21 1 4 0.25 1 1 0 0 0 0
............TGCCTCGGCCTTCGCCGTGA................................................................................................................................................ 20 1 5 0.20 1 1 0 0 0 0
............TGCCTCGGCCTTCGCCGTGTCT.............................................................................................................................................. 22 0 5 0.20 1 1 0 0 0 0
...................................................................GCCATCTGGGCCGCCTTCGCTG....................................................................................... 22 3 10 0.20 2 2 0 0 0 0
.............GCCTCGGCCTTCGCCGTGTCTGT............................................................................................................................................ 23 1 5 0.20 1 1 0 0 0 0
...........GTGCCTCGGCCTTCGCCGTGTCTGC............................................................................................................................................ 25 1 5 0.20 1 1 0 0 0 0
..................................................................................................................................GGTTTGGGGTTTCTCCTCCGCGGG...................... 24 1 5 0.20 1 1 0 0 0 0
......................................................................................................................................TGGGGTTTGTCCTCCGCGGGT..................... 21 1 5 0.20 1 1 0 0 0 0
..................................................................................................TCGCCATTCCTGCCGCTG............................................................ 18 0 5 0.20 1 1 0 0 0 0
...........CTGCCTCGGCCTTCGCCGTGT................................................................................................................................................ 21 0 5 0.20 1 1 0 0 0 0
................TCGGCCTTCGCCGTGTCTGCC........................................................................................................................................... 21 0 5 0.20 1 1 0 0 0 0
............TGCCTCGGCCTTCGCCGTGTCTGCCGT......................................................................................................................................... 27 1 5 0.20 1 1 0 0 0 0
................TCGGCCTTCGCCGTGTCTGCCGT......................................................................................................................................... 23 1 5 0.20 1 1 0 0 0 0
.............GCCTCGGCCTTCGCCGTGTAA.............................................................................................................................................. 21 2 6 0.17 1 1 0 0 0 0
...........................................................................................................................................TTTCTCCTCCGCGGGTCCCTG................ 21 0 6 0.17 1 1 0 0 0 0
...........................................................................................................CTGCGGCTTAAGTCGTGGGG................................................. 20 3 12 0.17 2 1 0 0 0 1
............................................................................................................TGCCGCTGAGGTCGTGGG.................................................. 18 0 7 0.14 1 1 0 0 0 0
....................................................................................................GCCATTCCTGCCGCTGCGGTCGTA.................................................... 24 2 7 0.14 1 0 0 1 0 0
.................................................................TCGCCGCTTGGGCCGCCTTCGT......................................................................................... 22 3 7 0.14 1 1 0 0 0 0
............................................................................................................TGCCGCTGAGGTCGTGGGG................................................. 19 0 7 0.14 1 1 0 0 0 0
.......................................................................................................ATTCCGGCCGCTGAGCTCGC..................................................... 20 3 7 0.14 1 0 0 0 0 1
..................................................CCGCTGCCTCGGCCTTCGCC.......................................................................................................... 20 0 7 0.14 1 0 1 0 0 0
...........................................................................................................................................TTTCTCCTCCGCGGGTCTA.................. 19 2 7 0.14 1 1 0 0 0 0
...............................TCCGCCGCGGCCTCGTCCGC............................................................................................................................. 20 2 7 0.14 1 1 0 0 0 0
..................................................................................................................................................TCCGCGGGTCCCTGTCGTTACTGC...... 24 1 7 0.14 1 1 0 0 0 0
...........................................TCGTCCGCCGCCGCCTCGGCAA............................................................................................................... 22 3 7 0.14 1 1 0 0 0 0
....................................................GCTGCCTCGGCCTTCGCC.......................................................................................................... 18 0 7 0.14 1 1 0 0 0 0
...............................................................................................................................................TCCTCCGCGGGTCCCTGTCGTTACTGCA..... 28 2 7 0.14 1 0 0 1 0 0
...................................................................................................CGCCATTCCTGACGCTGCGGTCCTG.................................................... 25 3 7 0.14 1 0 1 0 0 0
............................................................................................................TGCCGCTGAGGTCGTGGGT................................................. 19 1 7 0.14 1 1 0 0 0 0
...................................................................GCCGTCTGGGTCGCCGTCGCTG....................................................................................... 22 2 8 0.13 1 1 0 0 0 0
.................................................................TCGCCGTCTGGGTCGCCGTCGCT........................................................................................ 23 2 8 0.13 1 1 0 0 0 0
...................................................................GCCATCTGGGCCGCCTTCGCTGC...................................................................................... 23 3 9 0.11 1 1 0 0 0 0
.........................................................................................................TCCTGCCGCTGCGGTCGT..................................................... 18 1 9 0.11 1 1 0 0 0 0
...........................................................................................................CTGCGGCTTAGGTCGTGGGA................................................. 20 3 9 0.11 1 1 0 0 0 0
.........................................................................TGGGCCGCCGTCGCTGCAA.................................................................................... 19 2 11 0.09 1 1 0 0 0 0
............................................................................................................................................TTCTCCTCCGCGGGTCCAAA................ 20 3 12 0.08 1 1 0 0 0 0
........................................GCCTCGTCCGCCGCTGTT...................................................................................................................... 18 2 14 0.07 1 0 1 0 0 0

Anti-sense strand reads

#########################################################################################################-----------------------------------------------------------------------
GCCCAGTCGGTGACGGAGCCGGAAGCGGCACAGACGGCGGCGGAGCAGGCGGCGACGGAGCCGGAAGCGGCGGACCCGGCGGCAGCGACGGCGGCAGCAGCGGTAAGGACGGCGACTCCAGCACCCCCGTCCAGACCCCAAAGAGGAGGCGCCCAGGGACAGTAATGACGGCTCAC
************************************((..((((((..((((((((.((((.(((.((.......((.((....)).)).......)).))).)))).))))))))))))..)).))************************************************* 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V042
embryo
 V111
male body		 M021
embryo
 V057
head
...................................................................................................................................................GGCGCCCAGGGACAGTAATGACG...... 23 0 2 5.00 10 9 0 1 0 0
.....................................................................................................................................................CGCCCAGGGACAGTAATGACG...... 21 0 2 3.50 7 6 1 0 0 0
..................................................................................................................................................AGGCGCCCAGGGACAGTAATGACG...... 24 0 2 2.50 5 4 0 1 0 0
.........................................................................................GGCGGCAGCAGCGGTAAGGAC.................................................................. 21 0 1 2.00 2 2 0 0 0 0
....................................................................................................................................................GCGCCCAGGGACAGCAATGACG...... 22 1 7 1.14 8 8 0 0 0 0
.......................................................................................ACGGCGGCAGCAGCGGTAAGGAC.................................................................. 23 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................GAGGCGCCCAGGGACAGTAATGACG...... 25 0 2 1.00 2 2 0 0 0 0
........................................................................................CGGCGGCAGCAGCGGTAAGGAC.................................................................. 22 0 1 1.00 1 1 0 0 0 0
........................................................................................CGGCGGCAGCAGGGGTAAGGA................................................................... 21 1 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................TGCCCAGGGACAGTAATGACG...... 21 1 2 1.00 2 1 1 0 0 0
......................................................................................GACGGCGGCAGCAGCGGTAAGGAC.................................................................. 24 0 1 1.00 1 1 0 0 0 0
........................................................................................................................................................CCAGGGACAGTAATGACGGCTC.. 22 0 2 1.00 2 2 0 0 0 0
........................................................................................CGGCGGCAGCAGCGGTAAGGA................................................................... 21 0 1 1.00 1 1 0 0 0 0
....................................................................................................................................................GCGCCCAGGGACAGTAATGACG...... 22 0 2 1.00 2 1 1 0 0 0
.........................................................................................................................................CCAAAGAGGAGGCGCCCA..................... 18 0 6 0.83 5 4 0 0 1 0
...................................................................................................................................................GGCGCCCAGGGACAGCAATGACG...... 23 1 7 0.57 4 4 0 0 0 0
.......................................................................................................................................................CCCAGGGACAGTAATGACGGCTC.. 23 0 2 0.50 1 1 0 0 0 0
..................................................................................................................ACTCCAGCACCCCCGTCCAGAC........................................ 22 0 2 0.50 1 1 0 0 0 0
.....................................................................................................................................................CGCCCAGGGACAGTAATGAC....... 20 0 2 0.50 1 1 0 0 0 0
...........................................................................................................GACGGCGACTCCAGCACCCCCGT.............................................. 23 0 4 0.50 2 2 0 0 0 0
......................................................................................................................................................GCCCAGGGACAGTAATGACG...... 20 0 2 0.50 1 1 0 0 0 0
.....................................................................................................................................................CGCCCAGGGACAGTAATGACGGCTC.. 25 0 2 0.50 1 1 0 0 0 0
.....................................................................................................................................................CGCCCAGGGACAGTAATGACGGCT... 24 0 2 0.50 1 1 0 0 0 0
........................................................................................................................................................CCAGGGACAGTAATGACGGCT... 21 0 2 0.50 1 1 0 0 0 0
...........................................................................................................................................................GGGACAGTAATGACGGCTC.. 19 0 2 0.50 1 1 0 0 0 0
.........................................................................................................................................................CAGGGACAGTAATGACGGCTC.. 21 0 2 0.50 1 1 0 0 0 0
.....................................................................................................................CCAGCGCCCCCGTCCAGACCCCAA................................... 24 1 2 0.50 1 1 0 0 0 0
......................................................................................................................................................GCCCAGGGACAGTAATGACGGCTC.. 24 0 2 0.50 1 1 0 0 0 0
..............................................................................................................GGCGACTCCAGCACCCCCGT.............................................. 20 0 4 0.50 2 2 0 0 0 0
.....................................................................................................................................................CGCCCAGGGACAGTAATGACGGC.... 23 0 2 0.50 1 1 0 0 0 0
.............................................................................................................................CCCGTCCAGACCCCAAAGAGGAGG........................... 24 0 2 0.50 1 1 0 0 0 0
...................................................................................................................................................GGCGCCCAGGGACAGTAATGAC....... 22 0 2 0.50 1 1 0 0 0 0
..............GGAGCCGGAAGCGGCACAGAC............................................................................................................................................. 21 0 5 0.40 2 1 1 0 0 0
................................................................................................GCAGCGGTAAGGACGGCGACT........................................................... 21 0 3 0.33 1 1 0 0 0 0
.................................................CGGCGACGGAGCCGGAAGCGGCGGAC..................................................................................................... 26 0 3 0.33 1 1 0 0 0 0
..........................................GAGCAGGCGGCGACGGAGCC.................................................................................................................. 20 0 3 0.33 1 1 0 0 0 0
..........................................GAGCAGGCGGCGACAGAGCC.................................................................................................................. 20 1 3 0.33 1 1 0 0 0 0
...............................................................................................AGCAGCGGTAAGGACGACGACTCCA........................................................ 25 1 3 0.33 1 1 0 0 0 0
...........................................................................................CGGCGGCAGCGGTAAGGAC.................................................................. 19 1 3 0.33 1 1 0 0 0 0
..............................................................................................AAGCAGCGGTAAGGACGGCGACT........................................................... 23 1 3 0.33 1 1 0 0 0 0
............................................GCAGGCGGCGACGGAGCC.................................................................................................................. 18 0 3 0.33 1 1 0 0 0 0
...................................................................................................................................CAGACCCCAAAGAGGAGGCGCCC...................... 23 0 3 0.33 1 1 0 0 0 0
.........................CGGCACAGACGGCGGCGGAGCA................................................................................................................................. 22 0 3 0.33 1 1 0 0 0 0
........................................................................................................................................................CCAGGGACAGTAATGATGGCTC.. 22 1 3 0.33 1 1 0 0 0 0
................................................................................................GCAGCGGTAAGGACGGCGACTCCA........................................................ 24 0 3 0.33 1 1 0 0 0 0
..........................................................................................ATTGCAGCAGCGGTAAGGACGGCGACT........................................................... 27 3 3 0.33 1 1 0 0 0 0
.........................................GGAGCAGGCGGCGACGGAGCC.................................................................................................................. 21 0 3 0.33 1 1 0 0 0 0
.......................AGCGGCACAGACGGCGGCGGAGCA................................................................................................................................. 24 0 3 0.33 1 1 0 0 0 0
..................................................GGCGACGGAGCCGGACGCGGCGGA...................................................................................................... 24 1 3 0.33 1 1 0 0 0 0
................................................................................................ACAGCGGTAAGGACGGCGACT........................................................... 21 1 3 0.33 1 1 0 0 0 0
....................TGAAGCGGCACAGACGGCGGCGGAG................................................................................................................................... 25 1 3 0.33 1 0 1 0 0 0
..............................................................................................CAGCAGCGGTAAGGACGGCGACT........................................................... 23 0 3 0.33 1 1 0 0 0 0
..................................................................................................................................................AGGCGCCCAGGGACAGCAATGACG...... 24 1 7 0.29 2 2 0 0 0 0
.................................................................................................................................................GAGGCGCCCAGGGACAGCAATGACG...... 25 1 7 0.29 2 2 0 0 0 0
..................................................................................................................................................AGGCGCCCAGGGACAGTAA........... 19 0 4 0.25 1 1 0 0 0 0
..............................................................................................................GGCGACTCCAGCCCCCCCGTC............................................. 21 1 4 0.25 1 1 0 0 0 0
.............................................CAGGCGGCGACGGAGCCGGA............................................................................................................... 20 0 4 0.25 1 1 0 0 0 0
..........................................................................................................................................AAAAGAGGAGGCGCCCAGGGACAGT............. 25 1 4 0.25 1 1 0 0 0 0
............................................................................................GGCAGCAGCGGTAAGGAC.................................................................. 18 0 4 0.25 1 1 0 0 0 0
......................................................................................................................................................GCCCAGGGACAGTAACGACGGCTC.. 24 1 4 0.25 1 1 0 0 0 0
................................................................................................................CGACTCCAGCACCCCCGT.............................................. 18 0 4 0.25 1 1 0 0 0 0
....................................................................................................................GCCAGCGCCCCCGTCGAGACCCCA.................................... 24 3 4 0.25 1 1 0 0 0 0
................................................................................................................................................AGAGGCGCGCAGGGACAGT............. 19 2 5 0.20 1 0 0 1 0 0
............ACGGAGCCGGAAGCGGCACAGAC............................................................................................................................................. 23 0 5 0.20 1 1 0 0 0 0
............ACGGAGCCGGAAGGGGCACAGA.............................................................................................................................................. 22 1 5 0.20 1 1 0 0 0 0
.............CGGAGCCGGAAGCGGCACAGAC............................................................................................................................................. 22 0 5 0.20 1 1 0 0 0 0
................................................................................................................................................GGAGGCGCCCAGGGACAGCAATGACG...... 26 1 7 0.14 1 1 0 0 0 0
..............................................................................................................................................GAGGAGGCGCCCAGGGACAGCAAT.......... 24 1 7 0.14 1 0 0 0 1 0
.................................................................................................................................................AAGGCGCCCAGGGACAGCAATGACG...... 25 2 7 0.14 1 1 0 0 0 0
....................................................................................................................................................GCGCCCAGGGACAGCAATGAC....... 21 1 7 0.14 1 1 0 0 0 0
......................................................................................................................................................GCCCAGGGACAGCAATGACG...... 20 1 7 0.14 1 1 0 0 0 0
..............................................................................................................GGCGACTCCAGCACCCCC................................................ 18 0 7 0.14 1 1 0 0 0 0
....................................................................................................................................................CCGCCCAGGGACAGCAATGACG...... 22 2 7 0.14 1 1 0 0 0 0
.....................................................................................................................................................CGCCCAGGGACAGCAATGACG...... 21 1 7 0.14 1 1 0 0 0 0
..............................................................................................................GGCGACTCCAGCACCCCG................................................ 18 1 8 0.13 1 1 0 0 0 0
.............................ACGGCTGGCGGCGGAGCAG................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_28:68720-68895 - dpe_192 CGGGTCAG------CCACTGCCTCGGCCTTC-------------GCCGTG------TCTGCCGCCGC---CTCGTCCGCCG------------CTGC---CTCG------GCCTTCGCCGCC------TGGG---CCGCCGTCGCTGCC------------------------GCCG---------T---CGTCG------------------------------------------------CCATTCCTGCCGCTGA----------------------------GGTCGTGGG-----------GGCAGGTCTGGGGTTTCTCCTCCGCGGGT---------------CCCTGTCATTACTGCCGAGTG
dp5 Unknown_group_749:12547-12707 - CGGGTCAG------CCGCTGCCTCGGCCTTC-------------GCCGTG------TCTGCCGCCGC---CTCGTCCGCCG------------CTGC---CTCG------G--------------------G---CCGCCGTCGCTGCC------------------------TCCG---------T---CGTCG------------------------------------------------CCATTCCTGCCGCTGA----------------------------GGTCGTGG------------GGCAGGTCTGGGGTTTCTCCTCCGCGGGT---------------CCCTGTCATTACTGCCGAGTG
droWil2 scf2_1100000004754:33265-33439 - CGCTGCAC------CCGCTGCCACTGCTGTA-------------CCCACC------GCCGCTGCACC---------CGCTG---CCAC---TTCTGTAC---CC------GC------TGCCACCACCGCTG---CCGCCGTTGCACCC------------------------GC---------------TGCCACTGCT------GTA---CCCGCCGACTATATGTC---TGCCATGCGGG----------------CTGCGGCCTCTCTCG------CCGCCCCCGC----------------------------------------------------------------CACTGGTCCCGAC--GCG
droVir3 scaffold_12970:8429782-8429969 - CGCCGTCG------TTGAGCTGCTCGCAC-TGCGCTCCGCACTAGCAGCA------GCTGCTGCTGC---TGTGGCCGCTG------------CAAC---TGCG------GCGCTCACCAGT------GCCG---CCGAAGGCGCTGCA---------------------------------------------------------GTC---GGCGTCG------------------------ACATTGTCGCCGTCGC----------------------------CGTGGTGGGCACCAGCGAGGGGGCGC---TAATGGGCCC-GCCGGCGGT------------------GGCCGTTGTCATT----G
droMoj3 scaffold_6540:27734547-27734711 - GGCGGCTG------CTGCCGCTGCGGCCGCC-------------GCAGTA------GCTGCCGCTGC---TGCTGCT---------GC---TGCTGT---GGCA------GCTGCCGCCGCC------GTTG---CCGTTACCGTTACC---------------GTTGTT---GCT------------GCTGTTGCTGCT------GTT---GCTGCCG---------A---T------GCTG----------------CCGATGCTGCTGTTG------CTGC----------------------------------------------------------------------TGCTGTTGTTGTTGTCGA
droGri2 scaffold_14612:1269-1444 - TGACGCTG------CTGCTGCTGCTGCTGTT-------------GGTGCTGCCGTTTTTGCTGCTGC---CGCTGCTGCTG------------CTGC---CGCT------GCTGCTGCTGCT------GCTG---CCGCTGCTGCCGCT---------------GCTGCT---GCT------------GCTGCTGCCGCT------GCT---GCTGTTG---------G---T------GCTG----------------CCGTTTTTGCTGCTGCTGATGCTGATGC-------------------------------------------------------------------TGCCGCTGCTGCT----G
droAna3 scaffold_13335:2354431-2354605 - CGCCTCCA------TTGCCGCCCACGCCCAC-------------GCCGAC------GCCGACGCCCACCTGG------------GAGC---CGCCGCCACCGCCGCCGCCG------CCGCC---------GTTGCCACTGCCGCTTCC------------------------AACG---------G---CGCCACTACCGCGTCCACC---GAGG------GCATTCATATT------GGGG----------------CCGTTGCCGCCGCCG------CCGCCG-----------------------------------------------------------------CCCTGGCGCTGCTGCT----G
droBip1 scf7180000396789:9634-9818 - CGGAGGCA------GCCTTTCTCCT-----GGCCTTC-------TCC--A---------ATATCCGT---CTTGTTCGCTG------C---TGC------CGTA------TCCTCCT-CGTC------CTCG---CCACCACCATCGCC------------------------------------------------CTCTCGCT-------TCCGTCG---------A---T----------CCGTCTTTGCCGCCAT----------------------------TCC-TTGG------------CGCTCCTTCGTCGGATCTGCTTCGC----CAGCTTTGCTCGGGCCCTCGCCATGTCCACC--GTG
droKik1 scf7180000302385:235374-235523 - CGCGTCCT------CCAAATCCTCCTCGGCC-------------GCCGCGA---TCTCCACCACGGT---CGCCGCCTCCACGG---------CCAC---GGAA------T------------------------CCGCCGCCACCTCC------------------------GCGA---------TCGCCGCCACCGCCACGACCACGGAAG----------------------------------------------CCACCGCCTCCTCCT------CCGC----------------------------------------------------------------------CGCCGCCACCACCGCGTG
droFic1 scf7180000453773:459601-459775 + TGCTAAAG------CTGGCGCTTCCGCTGAT-------------GCTGCC------GGCATTGCTACTCCCACCT------------C---CTCCGCCT---CC------GCTGCCGCCGCC------AACG---CCGCTGCCGCTGCC------------------------GACG---------T---CGACG------------------------------------------------ACGCCCGTCCCGGTGG----------------------------CGCTGGCA------------AACATTCCCGGTTCTTCTTATCTGCAACT---------------GTCTGTCGCCTCTGCCGATTC
droEle1 scf7180000490646:19360-19523 - CGCCACTG------GTACTGCCGCAGTCGTT-------------GTCGCT------GCCGCTGCTGT---CGTCTCT---------GCCGCCGCTGTCGCTGCTGTTGTCG------CTGCT---------GTTGTCACTGCTGCTGCC------------------------GTTA---------T---CGCTGCCGCTGCTGTCGTC---GCTGCCG----------------------------------------CCGCTGTCGCTGCTG------TTGTCGC-------------------------------------------------------------------TGTCGCTGCTGTT----G
droRho1 scf7180000778244:986-1162 + CGGCTGGT------CGGTAACTCGCGCGC-TGCCTTCTCT----GCCGCCT---TTTCTGCTGCAGT---CGTCTCTGCCG------------CCGC---TACA------GTCTTCGCTGTT------CTTA---TCGTTGATGTTACC---------------------------------------------GCTGCCGCTGTTGCT---GCT------------------------------------GCCGTCGT----------------------------TGTCGAT------TGCGGGTGAGGGGTCTTGTGTTTCCCTTC----------------------------AGCTCCCGTC--GTT
droBia1 scf7180000302126:820048-820202 + CGTCACGAGGTTGCACATTTCCACCG-------------------CCGCCA---GCTCCGCCGCCGC---CTCCTCCGCCACCGCCGC---GGTCGAA------------G------------------------CGTCCGCCGCCGCC------------------------GCCGTTGCCGCCAC---CACCGCCTCCGCGATCGAA---GCGGCCG----------------------------------------CCGCCGC------CT------CCTCCGC-------------------------------------------------------------------CGCCACCACCGCC----G
droTak1 scf7180000415380:285808-285960 + CGAAGCCA------CCGCCCCCGCCGTTGCC-------------GCCCCA---------GCTGCCGT---TGCTGCTGCCG------C---CGC------CGTA------GCCGCCTCCGCT------GGCG---CCACCATTGTTCCA------------------------GCC---------------GCCGTTGCC------GCC---GCCCTGG---------T---T------GTTC----------------CA-------------------------------CGG------------ACCACCGCCGCCGCTTCCGCCCTGC---------------------------------TGGTTCC
droEug1 scf7180000409045:4538-4708 - TGCCGCCG------TCGCTGCTGCTGCCGTC-------------GTCGTT------GCCGCCGCCGT---CGACGCT---------GC---CGCTGT---TATC------GC------CGCC---------G---CTGCTGTCGCTGCCGCTGTTGACGCTGCCGCTGTT---GTC------------GCTGCTGCTGTT------GTC---GCTGCCG---------G---T------GTTG----------------TCGCTGCCGCTGTTG------TCGC----------------------------------------------------------------------TGCCGCTGTTGTCGTTTT
dm3 chrX:8406494-8406589 - CGATACCG------CCATTGCCTCCGCCGCC-------------GCCGCC------GCCGCCACCTGCTCCT---CC---------TA---TTCCGCCG---CC------GC-------------------------------------------------------------------------------------------------------------------------------------------------------CGCCGCCGCCG------CCGC----------------------------------------------------------------------CGCCGCCGCCGCCGCCGC
droSim2 2r:19482344-19482487 + CGAATCCT------CCACGGCCACCGCGATC-------------GCCGCC------GCCACCGCGTC---------CACGG---CCGC---CTCCAAA------------T------------------------CCGCCGCCTCCTCC------------------------GCCG---------C---CGCCGCCACCACGACCACGGAATCCACCT----------------------------------------CCTCCTCCTCCTCCG------CCGC----------------------------------------------------------------------CGCCACCACCACCGCGTG
droSec2 scaffold_138:52138-52283 + TGCCGCTG------CCACTGCCGTCGCTGCC-------------GCTGTCG---TCGCTGCCGCTGT---CGTCGCTGCCG------------CTGTC---GTC------G---CTGCCG---------------CTGTCGTCGCTGCC------------------------GCTG---------T---CGTCGCTGCCGCTGTCGTC---GCTGCCG----------------------------------------CTGTCGT------TG------CTGCCGC-------------------------------------------------------------------TGTCGTTGCTGCC----G
droYak3 v2_chrUn_6893:7338-7504 - TGGTACTG------CTCCTGCCGCTGTCGCT-------------GCTGCT------GCCGCCGCTGCCTCTG------------CCGC---CGCCGCTACCGCTGCCGTCA------CTGTC---------G---CTACCGTCGCTGCCGCC---------------------GCTA---------T---CGCCGCCGCCGCTGTCGTT---GCTGCCG---------T---T------GTCG----------------CTGATGCCGCTATCG------CAGCCGT-------------------------------------------------------------------TGTCGTTGCTGCT----G
droEre2 scaffold_4929:22131503-22131659 + CATGTCAG------CGTCTGTTGGTGCCACT-------------GGCGCC------GCC------------CAACTCAATG------------GTGC---GCAA------CGCCTGGCCGCC------TGGT---CCACCTC--CCAGT---------ACT---GCTGGCGCTCG---------------CACCGTGGCC------CTT---CCTC------------AGCCT------GGGG----------------CAGTGGCGTGTGGCG------GTGT--------------------------------GGGCGTGCGC----------------------------------GTCGGCG----G

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
CGGGTCAG------CCACTGCCTCGGCCTTC-------------GCCGTG------TCTGCCGCCGC---CTCGTCCGCCG------------CTGC---CTCG------GCCTTCGCCGCC------TGGG---CCGCCGTCGCTGCC------------------------GCCG---------T---CGTCG------------------------------------------------CCATTCCTGCCGCTGA----------------------------GGTCGTGGG-----------GGCAGGTCTGGGGTTTCTCCTCCGCGGGT---------------CCCTGTCATTACTGCCGAGTGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................................................G------------------------------------------------CCATTCCTGCCGCTGA----------------------------GGTCGTGG.............................................................................253136.67410037230008
..................................................................................................................................................................................................G------------------------------------------------CCATTCCTGCCGCTGA----------------------------GGTCGTG..............................................................................24339.6711901161011
..................................................................................................................................................................................................G------------------------------------------------CCATTCCTGCCGCTGA----------------------------GGTCGTGGG-----------.................................................................26319.33580580000
..................................................................................................................................................................................................G------------------------------------------------CCATTCCTGCCGCTGA----------------------------GGTCGT...............................................................................23319.33583532000
..................................................................................................................................................................................................G------------------------------------------------CCATTCCTGCCGCTGA----------------------------GGTCG................................................................................22318.00540540000
..................................................................................................................................................................................................G------------------------------------------------CCATTCCTGCCGCTGA----------------------------GGTCGTGGG-----------G................................................................2739.33280270001
..................................................................................................................................................................................................G------------------------------------------------CCATTCCTGCCGCTGA----------------------------GGTC.................................................................................2139.00270270000
...................................................................................................................................................................................................................................................CCATTCCTGCCGCTGA----------------------------GGTCGTGG.............................................................................2436.00180180000
..................................................................................................................................................................................................G------------------------------------------------CCATTCCTGCCGCTGA----------------------------GGT..................................................................................2033.67110110000
..................................................................................................................................................................................................G------------------------------------------------CCATTCCTGCCGCTGA----------------------------GG...................................................................................1932.678080000
...................................................................................................................................................................................................................................................CCATTCCTGCCGCTGA----------------------------GGTCGTG..............................................................................2332.006060000
......................TCGGCCTTC-------------GCCGTG------TCTGCCG.....................................................................................................................................................................................................................................................................................................................2251.809090000
..............................................................GCCGC---CTCGTCCGCCG------------CTGC---CTC.............................................................................................................................................................................................................................................................................2331.675050000
...................................................................................................................................................................................................................................................CCATTCCTGCCGCTGA----------------------------GGTCGT...............................................................................2231.675050000
................................................................................................................................................................................................TCG------------------------------------------------CCATTCCTGCCGCTGA----------------------------GGTCG................................................................................2431.675041000
...................................................................................................................................................................................................................................................CCATTCCTGCCGCTGA----------------------------GGTCGTGGG-----------.................................................................2531.334040000
.........................................................................................................................................................................................................................................................................................................................TCTGGGGTTTCTCCTCCGCGGGT---------------C....................2431.334130000
...................................................................................................................................................................................................................................................CCATTCCTGCCGCTGA----------------------------GGTCG................................................................................2131.334040000
................................................................................................................................................................................................TCG------------------------------------------------CCATTCCTGCCGCTGA----------------------------GGTCGTGG.............................................................................2731.334040000
..............................................................GCCGC---CTCGTCCGCCG------------CTGC---CT..............................................................................................................................................................................................................................................................................2231.334040000
..............................................................GCCGC---CTCGTCCGCCG------------CTGC---CTCG------G.....................................................................................................................................................................................................................................................................2531.334040000
......................................................................................................................................................................................................................................................TTCCTGCCGCTGA----------------------------GGTCGTGG.............................................................................2131.334040000
.......................CGGCCTTC-------------GCCGTG------TCTGCCG.....................................................................................................................................................................................................................................................................................................................2151.206051000
......................................................................................................................................................................................................................................................TTCCTGCCGCTGA----------------------------GGTCGTGGG-----------G................................................................2331.003030000
...........................................................................................................................................................................................................................................................................................................................TGGGGTTTCTCCTCCGCGGGT---------------CC...................2341.004040000
......................................................................................................................................................................................................................................................TTCCTGCCGCTGA----------------------------GGTCGTGGG-----------GG...............................................................2431.003030000
..............................................................GCCGC---CTCGTCCGCCG------------CTGC---CTCG------......................................................................................................................................................................................................................................................................2431.003030000
....................................................................................................................................................................................................................................................................................................................GCAGGTCTGGGGTTTCTCCTCC..........................................2221.002020000
................................................................................................................................................................................................TCG------------------------------------------------CCATTCCTGCCGCTGA----------------------------GGTCGTG..............................................................................2631.003120000
...........................................................................................................................................................................................................................................................................................................................TGGGGTTTCTCCTCCGCGGGT---------------.....................2141.004031000
....................................................................................................................................................................................................................................................................................................................GCAGGTCTGGGGTTTCTCCTCCG.........................................2321.002020000
......................TCGGCCTTC-------------GCCGTG------TCTGCCGCCG..................................................................................................................................................................................................................................................................................................................2531.003030000
.................................................................................................................TTCGCCGCC------TGGG---CCGCCGTCGC...................................................................................................................................................................................................................................2331.003030000
.........................................................................................................................................................................................................................................................................................................................TCTGGGGTTTCTCCTCCGCGG......................................2131.003030000
......................TCGGCCTTC-------------GCCGTG------TCTGCCGC....................................................................................................................................................................................................................................................................................................................2340.753030000
....................................................................................................................GCCGCC------TGGG---CCGCCGTCGCTG.................................................................................................................................................................................................................................2240.753030000
.................................................................................................................................................................................................CG------------------------------------------------CCATTCCTGCCGCTGA----------------------------GGTCGTGGG-----------.................................................................2730.672020000
.....................................................................................................TCG------GCCTTCGCCGCC------TGGG---CCGCCG.......................................................................................................................................................................................................................................2530.672020000
....................................................................................................................................................................................................................................................CATTCCTGCCGCTGA----------------------------GGTCGTGG.............................................................................2330.672020000
.............................TC-------------GCCGTG------TCTGCCGCCGC---CTCGT.........................................................................................................................................................................................................................................................................................................2430.672020000
................................................TG------TCTGCCGCCGC---CTCGTC........................................................................................................................................................................................................................................................................................................1930.672020000
..............................................................GCCGC---CTCGTCCGCCG------------CT.....................................................................................................................................................................................................................................................................................1830.672020000
............................TTC-------------GCCGTG------TCTGCCGCCGC---CT............................................................................................................................................................................................................................................................................................................2230.672020000
............................TTC-------------GCCGTG------TCTGCCGCCG..................................................................................................................................................................................................................................................................................................................1930.672020000
..........................................................TGCCGCCGC---CTCGTCCGCCG------------.......................................................................................................................................................................................................................................................................................2030.672200000
................................................................................G------------CTGC---CTCG------GCCTTCGCCGCC------TG..................................................................................................................................................................................................................................................2330.672020000
..............................................................GCCGC---CTCGTCCGCCG------------CTG....................................................................................................................................................................................................................................................................................1930.672020000
..................................................................................................................................................................................................G------------------------------------------------CCATTCCTGCCGCTGA----------------------------GGTCGTGT.............................................................................2530.672020000
..............................................................................................TGC---CTCG------GCCTTCGCCGCC------TGG.................................................................................................................................................................................................................................................2230.672020000
..........................................................TGCCGCCGC---CTCGTCCGCCG------------CTG....................................................................................................................................................................................................................................................................................2330.672020000
.......................................................................................................................................................................................................................................................TCCTGCCGCTGA----------------------------GGTCGTGGG-----------GG...............................................................2330.672020000
.......................CGGCCTTC-------------GCCGTG------TCTGCCGCCG..................................................................................................................................................................................................................................................................................................................2430.672011000
............................................GCCGTG------TCTGCCGCCGC---CTCGTCC.......................................................................................................................................................................................................................................................................................................2430.672020000
.................................................................................................................................................................................................CG------------------------------------------------CCATTCCTGCCGCTGA----------------------------GGTCGTGG.............................................................................2630.672020000
..................................................................................................................................................................................................G------------------------------------------------CCATTCCTGCCGCTGA----------------------------GGTCGG...............................................................................2330.672200000
..................................................................................................................................................................................................G------------------------------------------------CCATTCCTGCCGCTGA----------------------------GGTCGTT..............................................................................2430.672011000
................................................TG------TCTGCCGCCGC---CTCGTCCG......................................................................................................................................................................................................................................................................................................2130.672011000
....................................................................................................................................................................................................................................................................................................................GCAGGTCTGGGGTTTCTCC.............................................1920.501010000
............................................................................................................................................................................................................................................................................................................................................GGGT---------------CCCTGTCATTACTGCCGAGTG2520.501010000
.............................................................................................................................................................................................................................................................................................................................................GGT---------------CCCTGTCATTACTGCCGA...2120.501010000
....................................................................................................................................................................................................................................................................................................................GCAGGTCTGGGGTTTCTCCTCCGCGG......................................2620.501010000
...........................................................................................................................................................................................................................................................................................................................TGGGGTTTCTCCTCCGCGGG.....................................2040.502020000
...........................................................................................................................................................................................................................................................................................................................TGGGGTTTCTCCTCCGCGGGT---------------C....................2240.502020000
..................................................................................................................................................................................................G------------------------------------------------CCATTCCTGCCGCTGA----------------------------GGTCGC...............................................................................2350.402020000
..................................................................................................................................................................................................G------------------------------------------------CCATTCCTGCCGCTGA----------------------------GA...................................................................................1950.402020000
..............................................................................CCG------------CTGC---CTCG------GCCTTCGCCGC...........................................................................................................................................................................................................................................................2230.331010000
.................................................................................................................TTCGCCGCC------TGGG---CCGCCGT......................................................................................................................................................................................................................................2030.331010000
......................................................................................................................................................................................................................................................TTCCTGCCGCTGA----------------------------GGTCGTGGG-----------A................................................................2330.331001000
.................................................................................................................................................................................................CG------------------------------------------------CCATTCCTGCCGCTGA----------------------------GGTCG................................................................................2330.331001000
..............................................................GCCGC---CTCGTCCGCCG------------CTGC---CTCG------GC....................................................................................................................................................................................................................................................................2630.331010000
..................................................................................................................................................................................................G------------------------------------------------CCATTCCTGCCGCTGA----------------------------GGTCGTGA.............................................................................2530.331010000
..................................................................................................................................................................................................G------------------------------------------------CCATTCCTGCCGCTGA----------------------------G....................................................................................1830.331010000
..............................................................................................TGC---CTCG------GCCTTCGCCGCC------TG..................................................................................................................................................................................................................................................2130.331010000
..............................................................................CCG------------CTGC---CTCG------GCCTTCGCCGCC------T...................................................................................................................................................................................................................................................2430.331010000
..............................................................GCCGC---CTCGTCCGCCG------------CTGC---C...............................................................................................................................................................................................................................................................................2130.331010000
..............................................................................................TGC---CTCG------GCCTTCGCCGCC------TGGG---AA...........................................................................................................................................................................................................................................2530.331010000
..............................C-------------GCCGTG------TCTGCCGCCGC---CTCGTCC.......................................................................................................................................................................................................................................................................................................2530.331010000
..................................................................C---CTCGTCCGCCG------------CTGC---CTCG------GC....................................................................................................................................................................................................................................................................2230.331010000
............................TTC-------------GCCGTG------TCTGCCGCCGC---..............................................................................................................................................................................................................................................................................................................2030.331010000
.................................................................................................................TTCGCCGCC------TGGG---CCGCCGTC.....................................................................................................................................................................................................................................2130.331010000
..........................................................................................................................................................................................................................................................................................................................CTGGGGTTTCTCCTCCGCGGGT---------------.....................2230.331010000
.........................................................................................................................................................................................................................................................................................................................TCTGGGGTTTCTCCTCCGCGGGT---------------.....................2330.331010000
.................................................................................................................TTCGCCGCC------TGGG---CCGCCGTCGCTT.................................................................................................................................................................................................................................2530.331100000
...........................................................................CCGCCG------------CTGC---CTCG------GCCTTCGCCGC...........................................................................................................................................................................................................................................................2530.331010000
.................................................................................................................................................................................................CG------------------------------------------------CCATTCCTGCCGCTGA----------------------------GGTC.................................................................................2230.331010000
..................................................................................................................................................................................................G------------------------------------------------CCATTCCTGCCGCTGA----------------------------GGTCA................................................................................2230.331010000
....................................................................................................................................................................................................................................................CATTCCTGCCGCTGA----------------------------GGTCGT...............................................................................2130.331010000
..................................................................C---CTCGTCCGCCG------------CTGC---CTCG------GCCT..................................................................................................................................................................................................................................................................2430.331010000
................................................................................................................................................................................................TCG------------------------------------------------CCATTCCTGCCGCTGA----------------------------GGTCGTGT.............................................................................2730.331010000
..................................................................................................................................................................................................G------------------------------------------------CCATTCCTGCCGCTGA----------------------------GGTCGTGAA-----------A................................................................2730.331010000
.........................................................................................................................................................................................................................................................................................................................TCTGGGGTTTCTCCTCCGCGGG.....................................2230.331010000
..................................................................................................................................................................................................G------------------------------------------------CCATTCCTGCCGCTGA----------------------------GGTCGTGGC-----------.................................................................2630.331010000
...............................................................................................................................................................................................GTCG------------------------------------------------CCATTCCTGCCGCTGA----------------------------GGTC.................................................................................2430.331010000
..............................................................GCCGC---CTCGTCCGCCG------------CTGC---CTCG------GCCT..................................................................................................................................................................................................................................................................2830.331010000
.................................................................GC---CTCGTCCGCCG------------CTGC---CTCG------......................................................................................................................................................................................................................................................................2130.331010000
..............................................................................................................................................................................................CGTCG------------------------------------------------CCATTCCTGCCGCTGA----------------------------G....................................................................................2230.331010000
............................................GCCGTG------TCTGCCGCCGC---CTCGT.........................................................................................................................................................................................................................................................................................................2230.331001000
...............................................................................................GC---CTCG------GCCTTCGCCGCC------TG..................................................................................................................................................................................................................................................2030.331010000
..............................................................GCCGC---CTCGTCCGCCG------------CTA....................................................................................................................................................................................................................................................................................1930.331010000
............................TTC-------------GCCGTG------TCTGCCGCCGC---CTCG..........................................................................................................................................................................................................................................................................................................2430.331010000
...............................................................................................GC---CTCG------GCCTTCGCCGCC------T...................................................................................................................................................................................................................................................1930.331010000
......................TCGGCCTTC-------------GCCGTG------TCTGCCGCC...................................................................................................................................................................................................................................................................................................................2430.331010000
....................................................................................................................................................................................................................................................CATTCCTGCCGCTGA----------------------------GGTCGTG..............................................................................2230.331010000
...............................................................................................................................................................................CG---------T---CGTCG------------------------------------------------CCATTCCTGCCGCTGA----------------------------GG...................................................................................2630.331010000
................................................................................................................................................................................................TCG------------------------------------------------CCATTCCTGCCGCTGA----------------------------GGTT.................................................................................2330.331010000
............................................GCCGTG------TCTGCCGCCGC---CTCGTCCGCC....................................................................................................................................................................................................................................................................................................2730.331010000
.................................................................................................................................................................................................CG------------------------------------------------CCATTCCTGCCGCTGA----------------------------GGTCGTG..............................................................................2530.331010000
..............................................................GCCGC---CTCGTCCGCCG------------CTGC---AA..............................................................................................................................................................................................................................................................................2230.331010000
.........................................................................................................................................................................................................................................................................................................................TCTGGGGTTTCTCCTCCGCGGGT---------------CC...................2530.331010000
............................TTC-------------GCCGTG------TCTGCCGCCGT---..............................................................................................................................................................................................................................................................................................................2030.331010000
.......................................................................TCGTCCGCCG------------CTGC---CTCG------G.....................................................................................................................................................................................................................................................................1930.331010000
........................................................TCTGCCGCCGC---CTCGTCCG......................................................................................................................................................................................................................................................................................................1930.331010000
................................................TG------TCTGCCGCCGC---CTCGTCCGCCG------------T......................................................................................................................................................................................................................................................................................2530.331010000
..................................................................................................................................................................................................G------------------------------------------------CCATTCCTGCCGCTGA----------------------------GGTCGTGGG-----------C................................................................2730.331000001
............................................GCCGTG------TCTGCCGCCGC---CTCG..........................................................................................................................................................................................................................................................................................................2130.331010000
.............................TC-------------GCCGTG------TCTGCCGCCGC---CT............................................................................................................................................................................................................................................................................................................2130.331010000
.................................................................................................................TTCGCCGCC------TGGG---CCGCCGTAAA...................................................................................................................................................................................................................................2330.331010000
................................................................................................................................................................................................TCG------------------------------------------------CCATTCCTGCCGCTGA----------------------------.....................................................................................1930.331010000
.............................TC-------------GCCGTG------TCTGCCGCCGC---CTCG..........................................................................................................................................................................................................................................................................................................2330.331010000
............................................GCCGTG------TCTGCCGCCGC---CTCGTA........................................................................................................................................................................................................................................................................................................2330.331010000
..............................................................................................TGC---CTCG------GCCTTCGCCGCC------T...................................................................................................................................................................................................................................................2030.331010000
..........................................................................TCCGCCG------------CTGC---CTCG------GCCTTCGCCGC...........................................................................................................................................................................................................................................................2630.331010000
..............................C-------------GCCGTG------TCTGCCGCCGC---CTCGT.........................................................................................................................................................................................................................................................................................................2330.331010000
..............................................................................................TGC---CTCG------GCCTTCGCCGCC------TGGG---.............................................................................................................................................................................................................................................2330.331010000
......................TCGGCCTTC-------------GCCGTG------TCTGCCGCCGC---..............................................................................................................................................................................................................................................................................................................2630.331010000
......................................................................................................................................................................................................................................................TTCCTGCCGCTGA----------------------------GGTCGTGGG-----------.................................................................2230.331010000
..................................................................................................................................................................................................G------------------------------------------------CCATTCCTGCCGCTGA----------------------------GGTCGTTT.............................................................................2530.331010000
.........................................................................................................................................................................................................................................................................................................................TCTGGGGTTTCTCCTCCGCGGGT---------------T....................2430.331010000
................................................................CGC---CTCGTCCGCCG------------CTGC---CTCG------G.....................................................................................................................................................................................................................................................................2330.331010000
.....................................................................................................TCG------GCCTTCGCCGCC------TGGG---TA...........................................................................................................................................................................................................................................2130.331010000
.....................................................................................................TCG------GCCTTCGCCGCC------TGGG---CCGCA........................................................................................................................................................................................................................................2430.331010000
..........................................................................TCCGCCG------------CTGC---CTCG------GCCTTCGCCGCC------....................................................................................................................................................................................................................................................2730.331010000
...................................................................................................................................................................................................................................................CCATTCCTGCCGCTGA----------------------------GGTCGTGGG-----------G................................................................2630.331010000
..........................................................................................................................................................................................T---CGTCG------------------------------------------------CCATTCCTGCCGCTGA----------------------------GG...................................................................................2430.331001000
.........................................................................................................................................................................................................................................................CTGCCGCTGA----------------------------GGTCGTGG.............................................................................1870.292020000
..................................................................................................................................................................................................G------------------------------------------------CCATTCCTGCCGCTGA----------------------------AA...................................................................................1980.252020000
.......................CGGCCTTC-------------GCCGTG------TCTGCCGC....................................................................................................................................................................................................................................................................................................................2240.251010000
.........................................................................................................................................................................................................................................................................................................................TCTGGGGTTTCTCCTCCGCG.......................................2040.251010000
...........................................................................................................................................................................................................................................................................................................................TGGGGTTTCTCCTCCGCGGGT---------------CAA..................2440.251010000
..........................................................................TCCGCCG------------CTGC---CTCG------GCCT..................................................................................................................................................................................................................................................................1940.251010000
...........................................................................................................................................................................................................................................................................................................................TGGGGTTTCTCCTCCGCGGGT---------------CCCTG................2640.251010000
..........................................................................TCCGCCG------------CTGC---CTCG------GCCTTCGT..............................................................................................................................................................................................................................................................2340.251010000
.................................................................................................................................................................................................................................................................................................................................TTCTCCTCCGCGGGT---------------CCCTGTCA.............2340.251010000
..................................................................................................................TCGCCGCC------TGGG---CCGCCGTCGCTG.................................................................................................................................................................................................................................2440.251010000
..........................................................................TCCGCCG------------CTGC---CTCG------GCCTTCGCC.............................................................................................................................................................................................................................................................2440.251010000
..............................................................................................................................................................................CCG---------T---CGTCG------------------------------------------------CCATTCCTGCCGCTGC----------------------------.....................................................................................2540.251010000
..................TGCCTCGGCCTTC-------------GCCGTG------A...........................................................................................................................................................................................................................................................................................................................2050.201010000
..................TGCCTCGGCCTTC-------------GCCGTG------TCT.........................................................................................................................................................................................................................................................................................................................2250.201010000
...................GCCTCGGCCTTC-------------GCCGTG------TCTGT.......................................................................................................................................................................................................................................................................................................................2350.201010000
................................................................................................................................................................................................TCG------------------------------------------------CCATTCCTGCCGCTG..................................................................................................................1850.201010000
.................CTGCCTCGGCCTTC-------------GCCGTG------T...........................................................................................................................................................................................................................................................................................................................2150.201010000
......................TCGGCCTTC-------------GCCGTG------TCTGCC......................................................................................................................................................................................................................................................................................................................2150.201010000
..................TGCCTCGGCCTTC-------------GCCGTG------TCTGCCGT....................................................................................................................................................................................................................................................................................................................2750.201010000
......................TCGGCCTTC-------------GCCGTG------TCTGCCGT....................................................................................................................................................................................................................................................................................................................2350.201010000
...................GCCTCGGCCTTC-------------GCCGTG------TAA.........................................................................................................................................................................................................................................................................................................................2160.171010000
................................................................................................................................................................................................................................................................................................................................TTTCTCCTCCGCGGGT---------------CCCTG................2160.171010000
..........................................................................................................................................................................................................................................................TGCCGCTGA----------------------------GGTCGTGGG-----------.................................................................1870.141010000
..........................................................................................................................................................................................................................................................TGCCGCTGA----------------------------GGTCGTGGG-----------G................................................................1970.141010000
..............................................................................CCG------------CTGC---CTCG------GCCTTCGCC.............................................................................................................................................................................................................................................................2070.141001000
................................................................................................................................................................................................................................................................................................................................TTTCTCCTCCGCGGGT---------------CTA..................1970.141010000
................................................................................G------------CTGC---CTCG------GCCTTCGCC.............................................................................................................................................................................................................................................................1870.141010000
..........................................................................................................................................................................................................................................................TGCCGCTGA----------------------------GGTCGTGGG-----------T................................................................1970.141010000
................................................................................................................................TGGG---CCGCCGTCGCTGCA------------------------A......................................................................................................................................................................................................19110.091010000
.................................................................................................................................................................................................................................................................................................................................TTCTCCTCCGCGGGT---------------CCAAA................20120.081010000
.................................................................GC---CTCGTCCGCCG------------CTGT---T...............................................................................................................................................................................................................................................................................18140.071001000
dp5
CGGGTCAG------CCGCTGCCTCGGCCTTC-------------GCCGTG------TCTGCCGCCGC---CTCGTCCGCCG------------CTGC---CTCG------G--------------------G---CCGCCGTCGCTGCC------------------------TCCG---------T---CGTCG------------------------------------------------CCATTCCTGCCGCTGA----------------------------GGTCGTGG------------GGCAGGTCTGGGGTTTCTCCTCCGCGGGT---------------CCCTGTCATTACTGCCGAGTGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................................................................................................................................................................................................................................................................................TGGGGTTTCTCCTCCGCGGGT---------------CC...................23112.002202200000000
...........................................................................................................................................................................................................................................................................................................................TGGGGTTTCTCCTCCGCGGGT---------------C....................22111.271401300100000
......................................................................................................................................................................................................................................................TTCCTGCCGCTGA----------------------------GGTCGTGG------------GGCAG............................................................2611.0010100000000
.............................................................................................................................................................................TCCG---------T---CGTCG------------------------------------------------CCATTCCTGCCGCTGA----------------------------G....................................................................................2711.0010100000000
......................................................................................................................................................................................................................................................TTCCTGCCGCTGA----------------------------GGTCGTG..............................................................................2020.5010100000000
......................................................................................................................................................................................................................................................TTCCTGCCGCTGA----------------------------GGTCGTGG------------.................................................................2120.5010100000000
.......................................................................................................................................................................................................................................................TCCTGCCGCTGA----------------------------GGTCGTGG------------GG...............................................................2220.5010100000000
................................................................................................................................................................................................TCG------------------------------------------------CCATTCCTGCCGCTG..................................................................................................................18140.3650500000000
...............................................................................................................................................GCTGCC------------------------TCCG---------T---CGTCG------------------------------------------------CCATTCC..........................................................................................................................2330.3310100000000
................................................................................................................................................................................................................................................................................................................................TTTCTCCTCCGCGGGT---------------CCCTGTCA.............2440.2510000000010
.........................................................................................................................................................................................................................................................................................................................TCTGGGGTTTCTCCTCCGCGG......................................2140.2510000100000
........................................................................................................................................................................................................................................................................................................................GTCTGGGGTTTCTCCTCCGCGGGT---------------C....................2540.2510100000000
...........................................................................................................................................................................................................................................................................................................................TGGGGTTTCTCCTCCGCGGGT---------------CCC..................24110.1820200000000
................................................................................................................................................................................................................................................................................................................................TTTCTCCTCCGCGGGT---------------CCCTGTC..............23130.1520110000000
...........................................................................................................................................................................................................................................................................................................................TGGGGTTTCTCCTCCGCGGGT---------------A....................22110.0910100000000
.............................................................................................................................................................................................................................................................................................................................GGGTTTCTCCTCCGCGGGT---------------.....................19120.0810100000000
................................................................................................................................................................................................................................................................................................................................TTTCTCCTCCGCGGGT---------------CCCTGT...............22130.0810100000000
..................................................................................................................................................................................................................................................................................................................................TCTCCTCCGCGGGT---------------CCCTGTC..............21130.0810100000000
.................................................................................................................................................................................................................................................................................................................................TTCTCCTCCGCGGGT---------------CCCTG................20130.0810100000000
..............................................................................................................................................................................................................................................................................................................................GGTTTCTCCTCCGCGGGT---------------CCCT.................22130.0810100000000
...............................................................................................................................................................................................................................................................................................................................GTTTCTCCTCCGCGGGT---------------CCC..................20140.0710100000000
...............................................................................................................................................................................................................................................................................................................................GTTTCTCCTCCGCGGGT---------------CC...................19140.0710100000000
...............................................................................................................................................................................................GTCG------------------------------------------------CCATTCCTGCCGCTG..................................................................................................................19140.0710100000000
droWil2
CGCTGCAC------CCGCTGCCACTGCTGTA-------------CCCACC------GCCGCTGCACC---------CGCTG---CCAC---TTCTGTAC---CC------GC------TGCCACCACCGCTG---CCGCCGTTGCACCC------------------------GC---------------TGCCACTGCT------GTA---CCCGCCGACTATATGTC---TGCCATGCGGG----------------CTGCGGCCTCTCTCG------CCGCCCCCGC----------------------------------------------------------------CACTGGTCCCGAC--GCGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................................................................................................................................................................................................................CTATATGTC---TGCCATGCGG..................................................................................................................................19200.10200020
..............................................................................................................................................................................................TGCCACTGCT------GTA---CCCGCCGA........................................................................................................................................................21200.10201010
..........................................................................................................................................................................................................................GACTATATGTC---TGCCATGCGGG----------------CTGC.............................................................................................................26200.05101000
.................................................................................................................................CTG---CCGCCGTTGCACCC------------------------GC---------------TG....................................................................................................................................................................................21200.05101000
..........................................................................................................................................................................................................................GACTATATGTC---TGCCATGCGGT----------------.................................................................................................................22200.05101000
......................................................................................AC---TTCTGTAC---CC------GC------TGCCACC.......................................................................................................................................................................................................................................................21200.05101000
...............................................................................TG---CCAC---TTCTGTAC---CC------GC------TGC...........................................................................................................................................................................................................................................................21200.05100001
...............................................................................................................................CGCTG---CCGCCGTTGCACCC------------------------GC---------------......................................................................................................................................................................................21200.05101000
...........................................................................................................................................................................................................................................................................TCTCTCG------CCGCCCCCGC----------------------------------------------------------------CACT..............21200.05101000
............................................................................................................................................................................................................................CTATATGTC---TGCCATGCGGG----------------C................................................................................................................21200.05100100
............................................................................CGCTG---CCAC---TTCTGTAC---CC------GC------..............................................................................................................................................................................................................................................................21200.05101000
.......................................................................................................................................................................................................T------GTA---CCCGCCGACTATATG.................................................................................................................................................19200.05101000
.........................................................................................................................................................................................................................................................................CCTCTCTCG------CCGCCCCCGC----------------------------------------------------------------C.................20200.05101000
..............................................................................................................................................................................................................................ATATGTC---TGCCATGCGGG----------------CTG..............................................................................................................21200.05101000
........................TGCTGTA-------------CCCACC------GCCGCTG.....................................................................................................................................................................................................................................................................................................................20200.05101000
droVir3
CGCCGTCG------TTGAGCTGCTCGCAC-TGCGCTCCGCACTAGCAGCA------GCTGCTGCTGC---TGTGGCCGCTG------------CAAC---TGCG------GCGCTCACCAGT------GCCG---CCGAAGGCGCTGCA---------------------------------------------------------GTC---GGCGTCG------------------------ACATTGTCGCCGTCGC----------------------------CGTGGTGGGCACCAGCGAGGGGGCGC---TAATGGGCCC-GCCGGCGGT------------------GGCCGTTGTCATT----GSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
GGCGGCTG------CTGCCGCTGCGGCCGCC-------------GCAGTA------GCTGCCGCTGC---TGCTGCT---------GC---TGCTGT---GGCA------GCTGCCGCCGCC------GTTG---CCGTTACCGTTACC---------------GTTGTT---GCT------------GCTGTTGCTGCT------GTT---GCTGCCG---------A---T------GCTG----------------CCGATGCTGCTGTTG------CTGC----------------------------------------------------------------------TGCTGTTGTTGTTGTCGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
TGACGCTG------CTGCTGCTGCTGCTGTT-------------GGTGCTGCCGTTTTTGCTGCTGC---CGCTGCTGCTG------------CTGC---CGCT------GCTGCTGCTGCT------GCTG---CCGCTGCTGCCGCT---------------GCTGCT---GCT------------GCTGCTGCCGCT------GCT---GCTGTTG---------G---T------GCTG----------------CCGTTTTTGCTGCTGCTGATGCTGATGC-------------------------------------------------------------------TGCCGCTGCTGCT----GSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
CGCCTCCA------TTGCCGCCCACGCCCAC-------------GCCGAC------GCCGACGCCCACCTGG------------GAGC---CGCCGCCACCGCCGCCGCCG------CCGCC---------GTTGCCACTGCCGCTTCC------------------------AACG---------G---CGCCACTACCGCGTCCACC---GAGG------GCATTCATATT------GGGG----------------CCGTTGCCGCCGCCG------CCGCCG-----------------------------------------------------------------CCCTGGCGCTGCTGCT----GSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
CGGAGGCA------GCCTTTCTCCT-----GGCCTTC-------TCC--A---------ATATCCGT---CTTGTTCGCTG------C---TGC------CGTA------TCCTCCT-CGTC------CTCG---CCACCACCATCGCC------------------------------------------------CTCTCGCT-------TCCGTCG---------A---T----------CCGTCTTTGCCGCCAT----------------------------TCC-TTGG------------CGCTCCTTCGTCGGATCTGCTTCGC----CAGCTTTGCTCGGGCCCTCGCCATGTCCACC--GTGSizeHit CountTotal NormTotal
No Reads
droKik1
CGCGTCCT------CCAAATCCTCCTCGGCC-------------GCCGCGA---TCTCCACCACGGT---CGCCGCCTCCACGG---------CCAC---GGAA------T------------------------CCGCCGCCACCTCC------------------------GCGA---------TCGCCGCCACCGCCACGACCACGGAAG----------------------------------------------CCACCGCCTCCTCCT------CCGC----------------------------------------------------------------------CGCCGCCACCACCGCGTGSizeHit CountTotal NormTotal
No Reads
droFic1
TGCTAAAG------CTGGCGCTTCCGCTGAT-------------GCTGCC------GGCATTGCTACTCCCACCT------------C---CTCCGCCT---CC------GCTGCCGCCGCC------AACG---CCGCTGCCGCTGCC------------------------GACG---------T---CGACG------------------------------------------------ACGCCCGTCCCGGTGG----------------------------CGCTGGCA------------AACATTCCCGGTTCTTCTTATCTGCAACT---------------GTCTGTCGCCTCTGCCGATTCSizeHit CountTotal NormTotal
No Reads
droEle1
CGCCACTG------GTACTGCCGCAGTCGTT-------------GTCGCT------GCCGCTGCTGT---CGTCTCT---------GCCGCCGCTGTCGCTGCTGTTGTCG------CTGCT---------GTTGTCACTGCTGCTGCC------------------------GTTA---------T---CGCTGCCGCTGCTGTCGTC---GCTGCCG----------------------------------------CCGCTGTCGCTGCTG------TTGTCGC-------------------------------------------------------------------TGTCGCTGCTGTT----GSizeHit CountTotal NormTotal
No Reads
droRho1
CGGCTGGT------CGGTAACTCGCGCGC-TGCCTTCTCT----GCCGCCT---TTTCTGCTGCAGT---CGTCTCTGCCG------------CCGC---TACA------GTCTTCGCTGTT------CTTA---TCGTTGATGTTACC---------------------------------------------GCTGCCGCTGTTGCT---GCT------------------------------------GCCGTCGT----------------------------TGTCGAT------TGCGGGTGAGGGGTCTTGTGTTTCCCTTC----------------------------AGCTCCCGTC--GTTSizeHit CountTotal NormTotal
No Reads
droBia1
CGTCACGAGGTTGCACATTTCCACCG-------------------CCGCCA---GCTCCGCCGCCGC---CTCCTCCGCCACCGCCGC---GGTCGAA------------G------------------------CGTCCGCCGCCGCC------------------------GCCGTTGCCGCCAC---CACCGCCTCCGCGATCGAA---GCGGCCG----------------------------------------CCGCCGC------CT------CCTCCGC-------------------------------------------------------------------CGCCACCACCGCC----GSizeHit CountTotal NormTotal
No Reads
droTak1
CGAAGCCA------CCGCCCCCGCCGTTGCC-------------GCCCCA---------GCTGCCGT---TGCTGCTGCCG------C---CGC------CGTA------GCCGCCTCCGCT------GGCG---CCACCATTGTTCCA------------------------GCC---------------GCCGTTGCC------GCC---GCCCTGG---------T---T------GTTC----------------CA-------------------------------CGG------------ACCACCGCCGCCGCTTCCGCCCTGC---------------------------------TGGTTCCSizeHit CountTotal NormTotal
No Reads
droEug1
TGCCGCCG------TCGCTGCTGCTGCCGTC-------------GTCGTT------GCCGCCGCCGT---CGACGCT---------GC---CGCTGT---TATC------GC------CGCC---------G---CTGCTGTCGCTGCCGCTGTTGACGCTGCCGCTGTT---GTC------------GCTGCTGCTGTT------GTC---GCTGCCG---------G---T------GTTG----------------TCGCTGCCGCTGTTG------TCGC----------------------------------------------------------------------TGCCGCTGTTGTCGTTTTSizeHit CountTotal NormTotal
No Reads
dm3
CGATACCG------CCATTGCCTCCGCCGCC-------------GCCGCC------GCCGCCACCTGCTCCT---CC---------TA---TTCCGCCG---CC------GC-------------------------------------------------------------------------------------------------------------------------------------------------------CGCCGCCGCCG------CCGC----------------------------------------------------------------------CGCCGCCGCCGCCGCCGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
No Reads
droSim2
CGAATCCT------CCACGGCCACCGCGATC-------------GCCGCC------GCCACCGCGTC---------CACGG---CCGC---CTCCAAA------------T------------------------CCGCCGCCTCCTCC------------------------GCCG---------C---CGCCGCCACCACGACCACGGAATCCACCT----------------------------------------CCTCCTCCTCCTCCG------CCGC----------------------------------------------------------------------CGCCACCACCACCGCGTGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
TGCCGCTG------CCACTGCCGTCGCTGCC-------------GCTGTCG---TCGCTGCCGCTGT---CGTCGCTGCCG------------CTGTC---GTC------G---CTGCCG---------------CTGTCGTCGCTGCC------------------------GCTG---------T---CGTCGCTGCCGCTGTCGTC---GCTGCCG----------------------------------------CTGTCGT------TG------CTGCCGC-------------------------------------------------------------------TGTCGTTGCTGCC----GSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................................................................................TGTC---GTC------G---CTGCCG---------------CTGTCGTCGC...................................................................................................................................................................................................................................24200.2044000
................................................................TGT---CGTCGCTGCCG------------CTGTC---GTC------G---C.................................................................................................................................................................................................................................................................24200.2044000
...............................................................................................................................................................................TG---------T---CGTCGCTGCCGCTGTCGTC---GC..............................................................................................................................................................24200.2044000
..............................................TGTCG---TCGCTGCCGCTGT---CGTCGC........................................................................................................................................................................................................................................................................................................24200.2044000
........................................................................................................................................TGTCGTCGCTGCC------------------------GCTG---------T---CGTCGC................................................................................................................................................................................24200.2044000
......................................................................................................................................................................................................................TGCCG----------------------------------------CTGTCGT------TG------CTGCCGC-------------------------------------------------------------------T.................22160.1933000
..........................................................TGCCGCTGT---CGTCGCTGCCG------------CTG....................................................................................................................................................................................................................................................................................23200.1533000
........................................................................................................................................................................................................................CCG----------------------------------------CTGTCGT------TG------CTGCCGC-------------------------------------------------------------------TGTCGT............2570.1411000
................................................................................................................................................................................................................................................................................TG------CTGCCGC-------------------------------------------------------------------TGTCGTTGCTGCC----G2370.1411000
...................................................................................................................................................................................................................................................................CTGTCGT------TG------CTGCCGC-------------------------------------------------------------------TGTCGTTGA.........2570.1411000
....................................................................................................................................................................................................................................................................TGTCGT------TG------CTGCCGC-------------------------------------------------------------------TGTCGTTG..........2370.1411000
........................................................................................................................................................................................................GCTGTCGTC---GCTGCCG----------------------------------------CTGTCGT------TG------C...........................................................................................2690.1111000
................................................................................................................................................................................................................C---GCTGCCG----------------------------------------CTGTCGT------TG------CTGCC.......................................................................................2290.1110010
..........................................................................................................................................................................................................TGTCGTC---GCTGCCG----------------------------------------CTGTCGT------TG------C...........................................................................................2490.1110001
.............................................................................................................................................................................................................CGTC---GCTGCCG----------------------------------------CTGTCGT------TG------............................................................................................2090.1111000
.......................................................................................................................................................................................................CGCTGTCGTC---GCTGCCG----------------------------------------CTGTCGT------TG------A...........................................................................................2790.1110001
..........................................................................................................................................................................................................TGTCGTC---GCTGCCG----------------------------------------CTGTCGT------TG------CTGC........................................................................................2790.1110001
....................................................................................................................................................................................................................GCTGCCG----------------------------------------CTGTCGT------TG------CTGCCGC-------------------------------------------------------------------T.................24160.0611000
.......................................................................GTCGCTGCCG------------CTGTC---GTC------G---CTGCC.............................................................................................................................................................................................................................................................24200.0511000
............................GCC-------------GCTGTCG---TCGCTGCCGCTGT---CG............................................................................................................................................................................................................................................................................................................25200.0510001
..............................................TGTCG---TCGCTGCCGCTGT---CGTCGCT.......................................................................................................................................................................................................................................................................................................25200.0511000
..................................................................................................................................................GCC------------------------GCTG---------T---CGTCGCTGCCGCTGTCG.....................................................................................................................................................................25200.0510001
..............................................TGTCG---TCGCTGCCGCTGT---CGTCGCTGC.....................................................................................................................................................................................................................................................................................................27200.0511000
................................................TCG---TCGCTGCCGCTGT---CGTCGCTG......................................................................................................................................................................................................................................................................................................24200.0511000
....................................................................................................................................................................................................TGCCGCTGTCGTC---GCTGCA..........................................................................................................................................................19200.0511000
........................................................................TCGCTGCCG------------CTGTC---GTC------G---CTGCCG---------------C............................................................................................................................................................................................................................................25200.0511000
..................................................................................................................................................................................................GCTGCCGCTGTCGTC---GCTGCCG----------------------------------------CTG..............................................................................................................25200.0511000
..........................................................TGCCGCTGT---CGTCGCTGCCG------------CTGTC---...............................................................................................................................................................................................................................................................................25200.0511000
................................................................TGT---CGTCGCTGCCG------------CTGTC---GTC------G---CTGC..............................................................................................................................................................................................................................................................27200.0511000
................................................................TGT---CGTCGCTGCCG------------CTGTC---GTC------G---CT................................................................................................................................................................................................................................................................25200.0511000
........................................................GCTGCCGCTGT---CGTCGCTGCCG------------CTG....................................................................................................................................................................................................................................................................................25200.0511000
..........................................................TGCCGCTGT---CGTCGCTGCA....................................................................................................................................................................................................................................................................................................19200.0511000
......................................................................................................TC------G---CTGCCG---------------CTGTCGTCGCTGCC------------------------GCTG---------..........................................................................................................................................................................................27200.0511000
....................................................................................................................................................................................................TGCCGCTGTCGTC---GCTGCCG----------------------------------------CTGTC............................................................................................................25200.0511000
..........................................................................................................................................TCGTCGCTGCC------------------------GCTG---------T---CGTCGCTG..............................................................................................................................................................................24200.0511000
...............................................................................................................................................................................TG---------T---CGTCGCTGCCGCTGTCGTC---GCT.............................................................................................................................................................25200.0511000
..........................................................................................................................................................................................T---CGTCGCTGCCGCTGTCGTC---GCTG............................................................................................................................................................24200.0511000
.............................................................................GCCG------------CTGTC---GTC------G---CTGCCG---------------CTGTCG.......................................................................................................................................................................................................................................25200.0510001
..........................................................TGCCGCTGT---CGTCGCTGCCG------------CT.....................................................................................................................................................................................................................................................................................22200.0511000
........................................................................................................................................TGTCGTCGCTGCC------------------------GCTG---------T---CGTCGCT...............................................................................................................................................................................25200.0511000
.............................................................................................................................................TCGCTGCC------------------------GCTG---------T---CGTCGCTGCCGCTG........................................................................................................................................................................27200.0511000
.......................TCGCTGCC-------------GCTGTCG---TCGCTGCCGCTG..................................................................................................................................................................................................................................................................................................................27200.0511000
...................................................................................................................TGCCG---------------CTGTCGTCGCTGCC------------------------GCTG---------T---CA....................................................................................................................................................................................26200.0510001
...........................................................GCCGCTGT---CGTCGCTGCCG------------CTGTC---G..............................................................................................................................................................................................................................................................................25200.0510001
....................................................................................................................................................................................................TGCCGCTGTCGTC---GCTGCCG----------------------------------------CT...............................................................................................................22200.0511000
.....................................................................................................................................................................................................GCCGCTGTCGTC---GCTGCCG----------------------------------------CTGTCG...........................................................................................................25200.0510001
................................................................................................TC---GTC------G---CTGCCG---------------CTGTCGTCGCTG.................................................................................................................................................................................................................................24200.0511000
.................................................................................................C---GTC------G---CTGCCG---------------CTGTCGTCGCTGCA------------------------.......................................................................................................................................................................................................25200.0511000
...................................................................................................................TGCCG---------------CTGTCGTCGCTGCC------------------------GCTG---------T---C.....................................................................................................................................................................................25200.0511000
....................................................................................................................................................................................................TGCCGCTGTCGTC---GCTGCCG----------------------------------------CTGTCA...........................................................................................................26200.0510001
......................................................TCGCTGCCGCTGT---CGTCGCTGCCG------------CTG....................................................................................................................................................................................................................................................................................27200.0511000
..............................................TGTCG---TCGCTGCCGCTGT---C.............................................................................................................................................................................................................................................................................................................19200.0511000
......................................................................CGTCGCTGCCG------------CTGTC---GTC------G---CTG...............................................................................................................................................................................................................................................................23200.0511000
.......................TCGCTGCC-------------GCTGTCG---TCGCTGCCGC....................................................................................................................................................................................................................................................................................................................25200.0511000
..............................................................................................................................................................................................CGTCGCTGCCGCTGTCGTC---GCTGC...........................................................................................................................................................24200.0511000
..............................................................................................................................................................................................CGTCGCTGCCGCTGTCGTC---GCTGCA..........................................................................................................................................................25200.0511000
...........................................................................................................................................CGTCGCTGCC------------------------GCTG---------T---CGTCGCTGC.............................................................................................................................................................................24200.0511000
..................................................................................................................................................................................................GCTGCCGCTGTCGTC---GCTG............................................................................................................................................................19200.0511000
.....................CGTCGCTGCC-------------GCTGTCG---TCGCTGCA......................................................................................................................................................................................................................................................................................................................25200.0511000
............................................GCTGTCG---TCGCTGCCGCTGT---CG............................................................................................................................................................................................................................................................................................................22200.0511000
...............................................................................................................................................GCTGCC------------------------GCTG---------T---CGTCGCTG..............................................................................................................................................................................19200.0511000
..............................................................................................................G---CTGCCG---------------CTGTCGTCGCTGCC------------------------GCTG---------..........................................................................................................................................................................................25200.0511000
........................................................................................................................................................................................................GCTGTCGTC---GCTGCCG----------------------------------------CTGTCG...........................................................................................................22200.0511000
.................................................................................................................................................TGCC------------------------GCTG---------T---CGTCGCTGCCGCTGTCA.....................................................................................................................................................................26200.0510001
.................................................................................................C---GTC------G---CTGCCG---------------CTGTCGTCGCTG.................................................................................................................................................................................................................................23200.0511000
............................................................................TGCCG------------CTGTC---GTC------G---CTGCCG---------------CT...........................................................................................................................................................................................................................................22200.0511000
......................................................................CGTCGCTGCCG------------CTGTC---GTC------G---CTGCA.............................................................................................................................................................................................................................................................25200.0511000
.....................CGTCGCTGCC-------------GCTGTCG---TCGCTG........................................................................................................................................................................................................................................................................................................................23200.0511000
..............................................................................................TGTC---GTC------G---CTGCCG---------------CTGTCGTCGCT..................................................................................................................................................................................................................................25200.0511000
.................................................................................................................................................TGCC------------------------GCTG---------T---CGTCGCTGCA............................................................................................................................................................................19200.0511000
................................................................................G------------CTGTC---GTC------G---CTGCCG---------------CTGTCG.......................................................................................................................................................................................................................................22200.0511000
...........................TGCC-------------GCTGTCG---TCGCTGCA......................................................................................................................................................................................................................................................................................................................19200.0511000
..........................................................................GCTGCCG------------CTGTC---GTC------G---CTGCCG---------------CTG..........................................................................................................................................................................................................................................25200.0511000
....................................................................................................................GCCG---------------CTGTCGTCGCTGCC------------------------GCTG---------T---CG....................................................................................................................................................................................25200.0510001
............................................................................TGCCG------------CTGTC---GTC------G---CTGCCG---------------CTGTC........................................................................................................................................................................................................................................25200.0511000
......................................................TCGCTGCCGCTGT---CGTCGCTGCCG------------C......................................................................................................................................................................................................................................................................................25200.0511000
...............................................................................................................................................GCTGCC------------------------GCTG---------T---CGTCGCTGCCGCTG........................................................................................................................................................................25200.0511000
.................................................................................................................................................TGCC------------------------GCTG---------T---CGTCGCTGCCGCT.........................................................................................................................................................................22200.0511000
.................................................CG---TCGCTGCCGCTGT---CGTCGCTGC.....................................................................................................................................................................................................................................................................................................24200.0511000
................................................................TGT---CGTCGCTGCCG------------CTGTC---...............................................................................................................................................................................................................................................................................19200.0511000
.........................GCTGCC-------------GCTGTCG---TCGCTGCCGCTG..................................................................................................................................................................................................................................................................................................................25200.0511000
...........................TGCC-------------GCTGTCG---TCGCTGCCGCTGT---C.............................................................................................................................................................................................................................................................................................................25200.0511000
..............................................................................................................................................................................................CGTCGCTGCCGCTGTCGTC---GCTG............................................................................................................................................................23200.0511000
......................................................................CGTCGCTGCCG------------CTGTC---GTC------G---CTGC..............................................................................................................................................................................................................................................................24200.0511000
......................................................................................................TC------G---CTGCCG---------------CTGTCGTCGCTGCC------------------------GC.....................................................................................................................................................................................................25200.0511000
........................................................................................................................................TGTCGTCGCTGCC------------------------GCTG---------T---C.....................................................................................................................................................................................19200.0511000
.................................................CG---TCGCTGCCGCTGT---CGTCGCTG......................................................................................................................................................................................................................................................................................................23200.0511000
...........................TGCC-------------GCTGTCG---TCGCTGCCGCT...................................................................................................................................................................................................................................................................................................................22200.0511000
.................................................................................................................................................TGCC------------------------GCTG---------T---CGTCGCTGCCGCTGTC......................................................................................................................................................................25200.0511000
..............................................................................................................G---CTGCCG---------------CTGTCGTCGCTG.................................................................................................................................................................................................................................19200.0511000
........................................................GCTGCCGCTGT---CGTCGCTG......................................................................................................................................................................................................................................................................................................19200.0511000
.......................................................................................................................G---------------CTGTCGTCGCTGCC------------------------GCTG---------T---CG....................................................................................................................................................................................22200.0511000
................................................................................................................................................................................................TCGCTGCCGCTGTCGTC---GCTGCCG----------------------------------------CTG..............................................................................................................27200.0511000
........................................................................TCGCTGCCG------------CTGTC---GTC------G---CTGCCG---------------CTG..........................................................................................................................................................................................................................................27200.0511000
.............................................................................................................................................TCGCTGCC------------------------GCTG---------T---CGTCGCTGCCGC..........................................................................................................................................................................25200.0511000
............................................................................TGCCG------------CTGTC---GTC------G---CTGCCG---------------CTGTCA.......................................................................................................................................................................................................................................26200.0510001
.............................................................................................................................................................................GCTG---------T---CGTCGCTGCCGCTGTCG.....................................................................................................................................................................22200.0511000
.....................CGTCGCTGCC-------------GCTGTCG---TCGCTGC.......................................................................................................................................................................................................................................................................................................................24200.0511000
.........................GCTGCC-------------GCTGTCG---TCGCTG........................................................................................................................................................................................................................................................................................................................19200.0511000
...........................................................................................................................................CGTCGCTGCC------------------------GCTG---------T---CGTCGCTGCA............................................................................................................................................................................25200.0511000
..........................................................TGCCGCTGT---CGTCGCTGCCG------------CTGTC---A..............................................................................................................................................................................................................................................................................26200.0510001
.................................................CG---TCGCTGCCGCTGT---CGTCGCTGCA....................................................................................................................................................................................................................................................................................................25200.0511000
..........................................................................................................................................................................................................TGTCGTC---GCTGCCG----------------------------------------CTGTC............................................................................................................19200.0511000
................................................................................................................................................................................................TCGCTGCCGCTGTCGTC---GCTGCCG----------------------------------------C................................................................................................................25200.0511000
...........................TGCC-------------GCTGTCG---TCGCTGCCGCTGT---CA............................................................................................................................................................................................................................................................................................................26200.0510001
..................................................G---TCGCTGCCGCTGT---CGTCGCTGCC....................................................................................................................................................................................................................................................................................................24200.0511000
...................................................................................................................TGCCG---------------CTGTCGTCGCTGCC------------------------GCT....................................................................................................................................................................................................22200.0511000
...........................................................................................................................................CGTCGCTGCC------------------------GCTG---------T---CGTCGCTG..............................................................................................................................................................................23200.0511000
...............................................................................................................................................................................TG---------T---CGTCGCTGCCGCTGTC......................................................................................................................................................................19200.0511000
..........................................................................GCTGCCG------------CTGTC---GTC------G---CTG...............................................................................................................................................................................................................................................................19200.0511000
.................................................................................................C---GTC------G---CTGCCG---------------CTGTCGTCGCTGC................................................................................................................................................................................................................................24200.0511000
..............................................................GCTGT---CGTCGCTGCCG------------CTGTC---G..............................................................................................................................................................................................................................................................................22200.0511000
..................................................................T---CGTCGCTGCCG------------CTGTC---GTC------G---CTG...............................................................................................................................................................................................................................................................24200.0511000
droYak3
TGGTACTG------CTCCTGCCGCTGTCGCT-------------GCTGCT------GCCGCCGCTGCCTCTG------------CCGC---CGCCGCTACCGCTGCCGTCA------CTGTC---------G---CTACCGTCGCTGCCGCC---------------------GCTA---------T---CGCCGCCGCCGCTGTCGTT---GCTGCCG---------T---T------GTCG----------------CTGATGCCGCTATCG------CAGCCGT-------------------------------------------------------------------TGTCGTTGCTGCT----GSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................TGCCGCTGTCGCT-------------GCTGCT------GCCGCCG.....................................................................................................................................................................................................................................................................................................................26226.5053000000000053
.................................................T------GCCGCCGCTGCCTCTG------------CCGC---CGCCG....................................................................................................................................................................................................................................................................................26117.0017020000000015
.....................................................................................CGC---CGCCGCTACCGCTGCCGTCA------CTT............................................................................................................................................................................................................................................................26117.0017000000000017
.............................................................................................................CA------CTGTC---------G---CTACCGTCGCTGCC...............................................................................................................................................................................................................................22210.0020000000000020
...TACTG------CTCCTGCCGCTGTCGCT-------------GC......................................................................................................................................................................................................................................................................................................................................24110.001007210000000
..........................................................................................................................................................................................................................................................................................GCCGT-------------------------------------------------------------------TGTCGTTGCTGC......17210.0020000000000020
.......................................................................................................................................................................................................................................................................TGCCGCTATCG------CAGCCGT-------------------------------------------------------------------..................1828.5017000000000017
............................................................................................................TCA------CTGTC---------G---CTACCGTCGCTGCCGCC---------------------GCTA---------..........................................................................................................................................................................................3027.5015000000000015
.................................................................................................TACCGCTGCCGTCA------CTGTC---------G---CTACCGT......................................................................................................................................................................................................................................2717.00707000000000
........................................................................................................................................TACCGTCGCTGCCGCC---------------------GCTA---------T---C.....................................................................................................................................................................................2226.5013000000000013
......TG------CTCCTGCCGCTGTCGCT-------------GCTG....................................................................................................................................................................................................................................................................................................................................2316.00605010000000
.............................................................CGCTGCCTCTG------------CCGC---CGCCGCTAAT...............................................................................................................................................................................................................................................................................2516.00600000000006
.......................................................................................................TGCCGTCA------CTGTC---------G---CTACCGTCGCT..................................................................................................................................................................................................................................2526.001205100000006
...TACTG------CTCCTGCCGCTGTCGCT-------------G.......................................................................................................................................................................................................................................................................................................................................2315.00504010000000
.........................................................................................................................................................................................................CTGTCGTT---GCTGCCG---------T---T------GTCG----------------CTGA.............................................................................................................2515.00500000000005
.......................................................................................................TGCCGTCA------CTGTC---------G---CTACCGTCGC...................................................................................................................................................................................................................................2424.50904410000000
.................................................................................................TACCGCTGCCGTCA------CTGTC---------G---CTACC........................................................................................................................................................................................................................................2514.00401300000000
....................................................................................................CGCTGCCGTCA------CTGTC---------G---CTAC.........................................................................................................................................................................................................................................2124.00800000000008
........................................................................................................................................................................................................................................T------GTCG----------------CTGATGCCGCTATCG------CAGCCG......................................................................................2614.00403010000000
.................................................T------GCCGCCGCTGCCTCTG------------CCGC---CGC......................................................................................................................................................................................................................................................................................2414.00403100000000
.......................................................................................................TGCCGTCA------CTGTC---------G---CTACCGTCGCTGC................................................................................................................................................................................................................................2724.00805100000002
TGGTACTG------CTCCTGCCGCTGTCGC......................................................................................................................................................................................................................................................................................................................................................2414.00403100000000
......................................................................................................................................................................................................................TGCCG---------T---T------GTCG----------------CTGATGCCGCTATCG------C...........................................................................................2714.00403010000000
.......................................................................................................TGCCGTCA------CTGTC---------G---CTACCGTCGCTG.................................................................................................................................................................................................................................2623.50706100000000
................................................................TGCCTCTG------------CCGC---CGCCGCTACCGCT............................................................................................................................................................................................................................................................................2513.00303000000000
TGGTACTG------CTCCTGCCGC............................................................................................................................................................................................................................................................................................................................................................1813.00300000000003
........................................................................................................................TC---------G---CTACCGTCGCTGCCGCC---------------------GCTA---------T---......................................................................................................................................................................................2533.00901000000008
........................................................................................................................................................................................................................................T------GTCG----------------CTGATGCCGCTATCG------CAGCCGT-------------------------------------------------------------------..................2713.00303000000000
......................................................................................................................................................................................................................TGCCG---------T---T------GTCG----------------CTGATGCCGCTATCG------............................................................................................2613.00303000000000
..............................................................................................CGCTACCGCTGCCGTCA------CTGTC---------G---C............................................................................................................................................................................................................................................2413.00301200000000
............................................GCTGCT------GCCGCCGCTGCCTCTG------------CCGC---.........................................................................................................................................................................................................................................................................................2612.00202000000000
......TG------CTCCTGCCGCTGTCGCT-------------GCTGC...................................................................................................................................................................................................................................................................................................................................2412.00202000000000
......................................................................................................................................................................................................................TGCCG---------T---T------GTCG----------------CTGATGCCGCTAT....................................................................................................2412.00202000000000
.............................................................................................................CA------CTGTC---------G---CTACCGTCGCTGC................................................................................................................................................................................................................................2122.00400100000003
.................................................................................................TACCGCTGCCGTCA------CTGTC---------G---CTACCG.......................................................................................................................................................................................................................................2612.00202000000000
................................................................................................................................................................................................................................................TCG----------------CTGATGCCGCTATCG------CAGCCGT-------------------------------------------------------------------..................2512.00202000000000
...TACTG------CTCCTGCCGCTGTCGCT-------------GCT.....................................................................................................................................................................................................................................................................................................................................2512.00202000000000
....................................................................................................CGCTGCCGTCA------CTGTC---------G---C............................................................................................................................................................................................................................................1822.00400000000004
................................................................................................................................................................................................................T---GCTGCCG---------T---T------GTCG----------------CTGATGCCGC.......................................................................................................2412.00200200000000
.................................................T------GCCGCCGCTGCCTCTG------------CCGC---.........................................................................................................................................................................................................................................................................................2112.00202000000000
..............................................................................................CGCTACCGCTGCCGTCA------CTGTC---------G---CTAC.........................................................................................................................................................................................................................................2712.00202000000000
........................................................................................................................................TACCGTCGCTGCCGCC---------------------GCTA---------T---CGCC..................................................................................................................................................................................2521.50302100000000
.......................................................................................................................................................................................................................................................................TGCCGCTATCG------CAGCCGT-------------------------------------------------------------------TGTCGTTGC.........2721.50303000000000
............................................................................................................TCA------CTGTC---------G---CTACCGTCGCTGCCGC.............................................................................................................................................................................................................................2521.50303000000000
........................................................................................................................................TACCGTCGCTGCCGCC---------------------GCTA---------T---......................................................................................................................................................................................2131.33400000000004
........................................................................................................GCCGTCA------CTGTC---------G---CTACCGTCGCTGC................................................................................................................................................................................................................................2621.00202000000000
.................................................................................................................................................................................................................................................CG----------------CTGATGCCGCTATCG------CAGCCGT-------------------------------------------------------------------TGT...............2711.00101000000000
........................................................................................................................................................................................................................................T------GTCG----------------CTGATGCCGCTATCG------CAGC........................................................................................2411.00100100000000
...............................................................................................................................................................................................................TT---GCTGCCG---------T---T------GTCG----------------CTGATGCCGC.......................................................................................................2511.00101000000000
.................................................................................................TACCGCTGCCGTCA------CTGTC---------G---CTACCGTC.....................................................................................................................................................................................................................................2811.00101000000000
................................................................TGCCTCTG------------CCGC---CGCCGCTACCGCTG...........................................................................................................................................................................................................................................................................2611.00101000000000
.......................................................................................................................................................................................................................GCCG---------T---T------GTCG----------------CTGATGCCGCTATCG------............................................................................................2511.00101000000000
.......................................................................................................................................................................................................................GCCG---------T---T------GTCG----------------CTGATGCCGCTATCG------CA..........................................................................................2711.00101000000000
...........................................................GCCGCTGCCTCTG------------CCGC---CGCCGCTAC................................................................................................................................................................................................................................................................................2611.00101000000000
..................................................................................................ACCGCTGCCGTCA------CTGTC---------G---CTACCGT......................................................................................................................................................................................................................................2611.00101000000000
...............TCCTGCCGCTGTCGCT-------------GCTGCT------GCCGC.......................................................................................................................................................................................................................................................................................................................2711.00101000000000
........................................................................................................................................................................................................................CCG---------T---T------GTCG----------------CTGATGCCGCTATCG------C...........................................................................................2511.00101000000000
..............CTCCTGCCGCTGTCGCT-------------GCTGC...................................................................................................................................................................................................................................................................................................................................2211.00101000000000
......................................................................................................................................................................................................................TGCCG---------T---T------GTCG----------------CTGATGCCGCTATC...................................................................................................2511.00101000000000
........................................................................................................................................................................................................................CCG---------T---T------GTCG----------------CTGATGCCGCTATCG------............................................................................................2411.00101000000000
..........................................................................................................................................................................................................................................................................CGCTATCG------CAGCCGT-------------------------------------------------------------------TGTCGTTGC.........2421.00201100000000
...............TCCTGCCGCTGTCGCT-------------GCTGCT------G...........................................................................................................................................................................................................................................................................................................................2311.00101000000000
....................................................................................................................................................................................................................................................................TGATGCCGCTATCG------CAGCCGT-------------------------------------------------------------------TGTC..............2511.00101000000000
.............................................................CGCTGCCTCTG------------CCGC---CGCCGCTACCG..............................................................................................................................................................................................................................................................................2611.00101000000000
.....................................................................................................................................................................................................................................................................GATGCCGCTATCG------CAGCCGT-------------------------------------------------------------------TGTCGT............2611.00101000000000
..................................................................CCTCTG------------CCGC---CGCCGCTACCGCTGCCG........................................................................................................................................................................................................................................................................2711.00101000000000
................................................................................................CTACCGCTGCCGTCA------CTGTC---------G---CTACC........................................................................................................................................................................................................................................2611.00101000000000
...............................................................CTGCCTCTG------------CCGC---CGCCGCTACCGC.............................................................................................................................................................................................................................................................................2511.00110000000000
......................................................................TG------------CCGC---CGCCGCTACCGCTGC..........................................................................................................................................................................................................................................................................2111.00101000000000
.................................................................................................TACCGCTGCCGTCA------CTGTC---------G---CTAT.........................................................................................................................................................................................................................................2411.00101000000000
...................................................................................................................................................................................................................................................................CTGATGCCGCTATCG------CAGCCGT-------------------------------------------------------------------TG................2411.00101000000000
.......................................................................................................................................................C---------------------GCTA---------T---CGCCGCCGCCGCTGTCGTT---G...............................................................................................................................................................2621.00202000000000
....ACTG------CTCCTGCCGCTGTCGCT-------------GC......................................................................................................................................................................................................................................................................................................................................2311.00101000000000
......................................................................................GC---CGCCGCTACCGCTGCCGTCA------CTG............................................................................................................................................................................................................................................................2511.00100100000000
............................................................................................................................................................................................................TCGTT---GCTGCCG---------T---T------GTCG----------------CTGATGCC.........................................................................................................2611.00101000000000
....................................................................TCTG------------CCGC---CGCCGCTACCGCTGCCGT.......................................................................................................................................................................................................................................................................2611.00101000000000
..............................................TGCT------GCCGCCGCTGCCTCTG------------CCGC---A........................................................................................................................................................................................................................................................................................2511.00101000000000
......TG------CTCCTGCCGCTGTCGCT-------------G.......................................................................................................................................................................................................................................................................................................................................2011.00101000000000
.............................................................CGCTGCCTCTG------------CCGC---CGCCGCTAC................................................................................................................................................................................................................................................................................2411.00101000000000
...........................................................................................CGCCGCTACCGCTGCCGTCA------CTG............................................................................................................................................................................................................................................................2311.00101000000000
...........................................................................................................................................................................................................GTCGTT---GCTGCCG---------T---T------GTCG----------------CTGATGC..........................................................................................................2611.00101000000000
..............................................TGCT------GCCGCCGCTGCCTCTG------------CCGC---CGC......................................................................................................................................................................................................................................................................................2711.00101000000000
.............................................................................................CCGCTACCGCTGCCGTCA------CTGTC---------G---C............................................................................................................................................................................................................................................2511.00101000000000
TGGTACTG------CTCCTGCCGCTGTCGCT-------------G.......................................................................................................................................................................................................................................................................................................................................2611.00101000000000
................................................................................................................................................................................................................T---GCTGCCG---------T---T------GTCG----------------CTGATGCCGCT......................................................................................................2511.00101000000000
........................................................................................................................................................................................................................................T------GTCG----------------CTGATGCCGCTATCG------CAGA........................................................................................2411.00100010000000
.................................................................................................................................................................................................................................................CG----------------CTGATGCCGCTATCG------CAGCCGT-------------------------------------------------------------------TG................2611.00101000000000
................................................................................................CTACCGCTGCCGTCA------CTGTC---------G---CTACCG.......................................................................................................................................................................................................................................2711.00101000000000
.....................................................................................................................................................................................................................................................................GATGCCGCTATCG------CAGCCGT-------------------------------------------------------------------TGTC..............2411.00101000000000
..................................................................................................ACCGCTGCCGTCA------CTGTC---------G---CTACCGTC.....................................................................................................................................................................................................................................2711.00101000000000
.......................................................................................................................................................................................................................................................................TGCCGCTATCG------CAGCCGT-------------------------------------------------------------------TGTCGTTG..........2621.00202000000000
..............................................................................................CGCTACCGCTGCCGTCA------CTGTC---------G---CT...........................................................................................................................................................................................................................................2511.00101000000000
.....................................................................................................................................................................................................GCCGCTGTCGTT---GCTGCCG---------T---T------GTCG----------------C................................................................................................................2621.00202000000000
.........................................................................................................................................................................................................................CG---------T---T------GTCG----------------CTGATGCCGCTATCG------CAG.........................................................................................2611.00101000000000
................CCTGCCGCTGTCGCT-------------GCT.....................................................................................................................................................................................................................................................................................................................................1811.00101000000000
......TG------CTCCTGCCGCTGTCGCT-------------........................................................................................................................................................................................................................................................................................................................................1911.00101000000000
...............................................................................................................................................................................................................................................GTCG----------------CTGATGCCGCTATCG------CAGCCG......................................................................................2511.00101000000000
......................................................................TG------------CCGC---CGCCGCTACCGCTGCCGTCA------A..............................................................................................................................................................................................................................................................2711.00101000000000
......TG------CTCCTGCCGCTGTCGCT-------------GC......................................................................................................................................................................................................................................................................................................................................2111.00101000000000
..............................................TGCT------GCCGCCGCTGCCTCTG------------CCGC---.........................................................................................................................................................................................................................................................................................2411.00101000000000
..........................................................................................................................................................................................................................G---------T---T------GTCG----------------CTGATGCCGCTATC...................................................................................................2111.00100100000000
..................................................................................................................................................................................................................................................G----------------CTGATGCCGCTATCG------CAGCCGT-------------------------------------------------------------------TG................2511.00101000000000
...............................................................................................................................................................................................................TT---GCTGCCG---------T---T------GTCG----------------CTGATGCC.........................................................................................................2311.00100100000000
..........................................................................................................................................................................................................................G---------T---T------GTCG----------------CTGATGCCGCTATCG------C...........................................................................................2311.00101000000000
...TACTG------CTCCTGCCGCTGTCGCT-------------GCTGC...................................................................................................................................................................................................................................................................................................................................2711.00101000000000
.......G------CTCCTGCCGCTGTCGCT-------------GCTGC...................................................................................................................................................................................................................................................................................................................................2311.00101000000000
....................................................................................................................................................................................................................................................................TGATGCCGCTATCG------CAGCCGT-------------------------------------------------------------------TGT...............2411.00101000000000
............................................................................................................TCA------CTGTC---------G---CTACCGTCGCTGC................................................................................................................................................................................................................................2221.00201100000000
.....................................................................................................................................................................................................................................................................GATGCCGCTATCG------CAGCCGT-------------------------------------------------------------------TGTCG.............2511.00101000000000
...........................................................................................CGCCGCTACCGCTGCCGTCA------CTGTC---------G---C............................................................................................................................................................................................................................................2711.00101000000000
................................................................................................................................................................................................................T---GCTGCCG---------T---T------GTCG----------------CTGATGCC.........................................................................................................2211.00100100000000
...............................................................................................................................................................................................................................................GTCG----------------CTGATGCCGCTATCG------CAGCCGT-------------------------------------------------------------------TG................2811.00101000000000
......................................................................TG------------CCGC---CGCCGCTACCGCTGCCG........................................................................................................................................................................................................................................................................2311.00101000000000
TGGTACTG------CTCCTGCCGCTGTCGCT-------------........................................................................................................................................................................................................................................................................................................................................2511.00101000000000
............................................................................................................TCA------CTGTC---------G---CTACCGTCGCTGCCG..............................................................................................................................................................................................................................2421.00202000000000
............................................................................................................................................................................................................TCGTT---GCTGCCG---------T---T------GTCG----------------CTGATGCCGC.......................................................................................................2811.00101000000000
.................................................T------GCCGCCGCTGCCTCTG------------CCGC---C........................................................................................................................................................................................................................................................................................2211.00100100000000
................................................................................................................................................................................................................................................TCG----------------CTGATGCCGCTATCG------CAGCCGT-------------------------------------------------------------------T.................2611.00101000000000
.....................................................................................CGC---CGCCGCTACCGCTGCCGTCA------A..............................................................................................................................................................................................................................................................2411.00101000000000
......................................................................................................CTGCCGTCA------CTGTC---------G---CTACCGTCGC...................................................................................................................................................................................................................................2520.50101000000000
.......................................................................................................TGCCGTCA------CTGTC---------G---CTACC........................................................................................................................................................................................................................................1920.50101000000000
.............................................................................................................................................TCGCTGCCGCC---------------------GCTA---------T---CGCC..................................................................................................................................................................................2020.50101000000000
..........................TCGCT-------------GCTGCT------GCCGCCGCTGCCTCTG------------................................................................................................................................................................................................................................................................................................2720.50101000000000
.................................................................................................................................................TGCCGCC---------------------GCTA---------T---CGCCGCC...............................................................................................................................................................................1920.50100100000000
..............................................................................................................................................................................................CGCCGCCGCCGCTGTCGTT---G...............................................................................................................................................................2020.50101000000000
.......................................................................................................................GTC---------G---CTACCGTCGCTGCCGCC---------------------GCTA---------T---......................................................................................................................................................................................2620.50101000000000
............................................................................................................TCA------CTGTC---------G---CTACCGTCGCTGCCGCC---------------------G......................................................................................................................................................................................................2720.50101000000000
............................................................................................................TCA------CTGTC---------G---CTACCGTCGCTGCCGCC---------------------GC.....................................................................................................................................................................................................2820.50101000000000
..........................................................................................................................................................................................................TGTCGTT---GCTGCCG---------T---T------GTCG----------------CTG..............................................................................................................2320.50101000000000
........................................................................................................................................................................................................................................................................GCCGCTATCG------CAGCCGT-------------------------------------------------------------------TGTCGTTG..........2520.50101000000000
..............................................TGCT------GCCGCCGCTGCCTCTG------------CC..............................................................................................................................................................................................................................................................................................2220.50100100000000
...............................................................................................................................................................................................................................................................................TCG------CAGCCGT-------------------------------------------------------------------TGTCGTTGCTGCT----G2420.50101000000000
.........................................................................................................................................ACCGTCGCTGCCGCC---------------------GCTA---------T---CGCCGC................................................................................................................................................................................2620.50101000000000
.................................................................................................................................................TGCCGCC---------------------GCTA---------T---CGCCGCCGCCG...........................................................................................................................................................................2320.50101000000000
......................................................................................................................TGTC---------G---CTACCGTCGCTGCCGCC---------------------GCTA---------..........................................................................................................................................................................................2620.50101000000000
..........................................................................................................................................................................................T---CGCCGCCGCCGCTGTCGTT---GCTGCC..........................................................................................................................................................2620.50101000000000
........................................................................................................................................TACCGTCGCTGCCGCC---------------------GCTA---------T---CGCCGC................................................................................................................................................................................2720.50101000000000
.......................................................................................................................................................................................................................................................................TGCCGCTATCG------CAGCCGT-------------------------------------------------------------------TGTCGTT...........2520.50101000000000
.....................................................................................................GCTGCCGTCA------CTGTC---------G---CTACCGTCG....................................................................................................................................................................................................................................2520.50101000000000
.................................................................................................................................................TGCCGCC---------------------GCTA---------T---CGCCGCCGCCGC..........................................................................................................................................................................2420.50101000000000
............................................GCTGCT------GCCGCCGCTGCCTCTG------------CC..............................................................................................................................................................................................................................................................................................2420.50101000000000
.......................................................................................................................................CTACCGTCGCTGCCGCC---------------------GCTA---------T---CGCC..................................................................................................................................................................................2620.50101000000000
............................................................................................................................................GTCGCTGCCGCC---------------------GCTA---------T---CGCCG.................................................................................................................................................................................2220.50101000000000
.......................................................................................................................................................................................................CGCTGTCGTT---GCTGCCG---------T---T------GTCG----------------C................................................................................................................2420.50101000000000
.............................................................................................................CA------CTGTC---------G---CTACCGTCGCTGCA...............................................................................................................................................................................................................................2220.50100000000001
..........................................................................................................................................................................................T---CGCCGCCGCCGCTGTCGTT---GCTGC...........................................................................................................................................................2520.50101000000000
..............................................TGCT------GCCGCCGCTGCCTCTG------------C...............................................................................................................................................................................................................................................................................................2120.50101000000000
..............................T-------------GCTGCT------GCCGCCGCTGCCTCT.............................................................................................................................................................................................................................................................................................................2220.50101000000000
.......................................................................................................................................................................................................................................................................TGCCGCTATCG------CAGCCGT-------------------------------------------------------------------TGTCGTC...........2520.50100100000000
..............................T-------------GCTGCT------GCCGCCGCTGCCTCTG------------AA..............................................................................................................................................................................................................................................................................................2520.50100100000000
..........................................................................................................CGTCA------CTGTC---------G---CTACCGTCGCTG.................................................................................................................................................................................................................................2320.50100100000000
.............................................................................................................................................................................................................................................................................TATCG------CAGCCGT-------------------------------------------------------------------TGTCGTTGCTGC......2420.50101000000000
................................................................................................................................................................................A---------T---CGCCGCCGCCGCTGTCGTT---GCTG............................................................................................................................................................2520.50101000000000
.........................................................................................................................C---------G---CTACCGTCGCTGCCGCC---------------------GCTA---------T---CGC...................................................................................................................................................................................2720.50101000000000
..........................................................................................................................................................................................T---CGCCGCCGCCGCTGTCGTT---GCTG............................................................................................................................................................2420.50101000000000
............................................................................................................................................................................................................TCGTT---GCTGCCG---------T---T------GTCG----------------CT...............................................................................................................2020.50100000010000
.................................................................................................................................................TGCCGCC---------------------GCTA---------T---CGCCGCCGCCGCT.........................................................................................................................................................................2520.50101000000000
..........................................................................................................CGTCA------CTGTC---------G---CTACCGTCGCTGC................................................................................................................................................................................................................................2420.50101000000000
..............................T-------------GCTGCT------GCCGCCGCTGCCTCTG------------C...............................................................................................................................................................................................................................................................................................2420.50101000000000
......................................................................................................................................................CC---------------------GCTA---------T---CGCCGCCGCCGCTGTCG.....................................................................................................................................................................2420.50100100000000
............................................................................................................TCA------CTGTC---------G---CTACCGTCGCTGCC...............................................................................................................................................................................................................................2320.50100000000001
............................................................................................................................................GTCGCTGCCGCC---------------------GCTA---------T---CGCCGCC...............................................................................................................................................................................2420.50100100000000
.......................................................................................................................................................................................................................................................................TGCCGCTATCG------CAGCCGT-------------------------------------------------------------------TGTCGTTGCT........2820.50101000000000
.....................................................................................................................................................................................................GCCGCTGTCGTT---GCTGCCG---------T---T------GT...................................................................................................................................2320.50100100000000
........................TGTCGCT-------------GCTGCT------GCCGCCGCTGCCTA..............................................................................................................................................................................................................................................................................................................2720.50101000000000
..........................................................................................................................................CCGTCGCTGCCGCC---------------------GCTA---------T---CGCCGC................................................................................................................................................................................2520.50101000000000
..........................................................................................................................................................................................T---CGCCGCCGCCGCTGTCGTT---GC..............................................................................................................................................................2220.50101000000000
TGGTACTG------CTCCTGCCGG............................................................................................................................................................................................................................................................................................................................................................1820.50100000000001
..............................T-------------GCTGCT------GCCGCCGCTGCCTCTG------------................................................................................................................................................................................................................................................................................................2320.50101000000000
..................TGCCGCTGTCGCT-------------GCTGCT------GCCGC.......................................................................................................................................................................................................................................................................................................................2420.50101000000000
..............................................................................................................A------CTGTC---------G---CTACCGTCGCTGCCGCC---------------------GC.....................................................................................................................................................................................................2620.50101000000000
........................................................................................................................................................................................................................................................................GCCGCTATCG------CAGCCGT-------------------------------------------------------------------TGTCGTTGC.........2620.50101000000000
..................................................................................................................................................................................................GCCGCCGCTGTCGTT---GCTGCCG---------T---T------G....................................................................................................................................2520.50101000000000
........................TGTCGCT-------------GCTGCT------GCCGCCGCTGCA................................................................................................................................................................................................................................................................................................................2530.33101000000000
...............................................................................................................................................................................................GCCGCCGCCGCTGTCGTT---GCTG............................................................................................................................................................2230.33100100000000
.................................................................................................................................................TGCCGCC---------------------GCTA---------T---CGCCGCCA..............................................................................................................................................................................2030.33101000000000
..................TGCCGCTGTCGCT-------------GCTGCT------GC..........................................................................................................................................................................................................................................................................................................................2140.25101000000000
droEre2
CATGTCAG------CGTCTGTTGGTGCCACT-------------GGCGCC------GCC------------CAACTCAATG------------GTGC---GCAA------CGCCTGGCCGCC------TGGT---CCACCTC--CCAGT---------ACT---GCTGGCGCTCG---------------CACCGTGGCC------CTT---CCTC------------AGCCT------GGGG----------------CAGTGGCGTGTGGCG------GTGT--------------------------------GGGCGTGCGC----------------------------------GTCGGCG----GSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................ACTCAATG------------GTGC---GCAA------CGCCTGGCC.............................................................................................................................................................................................................................................................2511.0011000000
......................................................................................................................................................................................................................TC------------AGCCT------GGGG----------------CAGTGGCGTGTGGCG------G...........................................................................................2711.0011000000
.............................................................................................................................................................................................................................................................................TGGCG------GTGT--------------------------------GGGCGTGCGC----------------------------------GTCGGCG----.2611.0011000000
................................................................................................................................................................................................................T---CCTC------------AGCCT------GGGG----------------CAGTGGCGTG.......................................................................................................2411.0011000000
..............................................................................ATG------------GTGC---GCAA------CGCCTGGCCGCC------TG..................................................................................................................................................................................................................................................2511.0011000000
......................................................................................................................................................................................................................TC------------AGCCT------GGGG----------------CAGTGGCGTGTA.....................................................................................................2311.0011000000
............................................................................................................................................................................................................................................................................GTGGCG------GTGT--------------------------------GGGCGTGCGC----------------------------------............2020.5011000000
.............................................................................................................................................................................................................................................................................TGGCG------GTGT--------------------------------GGGCGTGCGC----------------------------------GTCA........2320.5011000000
............................................................................................................................................TC--CCAGT---------ACT---GCTGGCGCTCG---------------CACCG.................................................................................................................................................................................2670.4333000000
....................................................................................................................................................T---------ACT---GCTGGCGCTCG---------------CACCGTGGCC------C.....................................................................................................................................................................2660.3322000000
...................................................................................................................................T---CCACCTC--CCAGT---------ACT---GCTGGCGCT.......................................................................................................................................................................................................2540.2511000000
.................................................................................................................................................................................................CGTGGCC------CTT---CCTC------------AGCCT------GGGG----------------.................................................................................................................2340.2511000000
.........................................................................................................................................ACCTC--CCAGT---------ACT---GCTGGCGCTCG---------------CACC..................................................................................................................................................................................2850.2011000000
...................................................................................................................................T---CCACCTC--CCAGT---------ACT---GCTGGCGC........................................................................................................................................................................................................2450.2011000000
................................................................................................................................TGGT---CCACCTC--CCAGT---------ACT---GCTGGCG.........................................................................................................................................................................................................2650.2011000000
................................................................................................................................................................T---GCTGGCGCTCG---------------CACCGTGGCC------C.....................................................................................................................................................................2360.1711000000
............................................................................................................................................TC--CCAGT---------ACT---GCTGGCGCTCG---------------CACCGTG...............................................................................................................................................................................2870.1411000000
....................................................................................................................................................T---------ACT---GCTGGCGCTCG---------------CACCGTGGCC------......................................................................................................................................................................2570.1411000000

Generated: 05/15/2015 at 02:43 PM