ID:

dpe_1919

 Coordinate:

scaffold_6:4506130-4506364 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-31.8 -31.5 -31.5

Flybase annnotation

CDS [Dper\GL12608-cds]; exon [dper_GLEANR_12751:1]; exon [dper_GLEANR_12751:2]; CDS [Dper\GL12608-cds]; intron [Dper\GL12608-in]

No Repeatable elements found

Sense Strand Reads

##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CGACTTTGACTACTGTCCTTTTTACAAGGAATTTATAACCCTGTCGCGAGGTGAGTGACGAAACTATAGTAGAACGTATGTATATTTTATGCGAAGTCTGTTCCCCTCCGTGGCGTCCAGAGATCGCCTTGGAGGTTTAAGTACTTCGCAGAGCAACTGTAGCAAATCATTCACCTGCGTCAAAGTGAAGTTAAATTTGGATGTGGTTTTGGGTCTGCTCACAGATCACAGCTGTCAGAATGCCACTATCTGAAATCGACTAACGATTCATTCTTATTATTGCAGCCATTGAATTAGACGCCTTCGTTGAACCCGATCCTTCACTGCTGCGAGAG
****************************************************************************************.((((((((((.....((((((.((((((....)).)))).))))))....)).))))))))..(((..((............))..)))..*********************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M021
embryo
 M042
female body
 V042
embryo
 V111
male body		 V057
head
 V050
head
........................................................................................ATGCGAAGTCTGTTCCCCTCCGTG............................................................................................................................................................................................................................... 24 0 1 24.00 24 16 2 3 3 0 0
........................................................................................ATGCGAAGTCTGTTCCCCTCCGTGGC............................................................................................................................................................................................................................. 26 0 1 12.00 12 9 3 0 0 0 0
..................................................................................................................GTCCAGAGATCGCCTTGGA.......................................................................................................................................................................................................... 19 0 1 4.00 4 4 0 0 0 0 0
.......................................................................................................................................................AGCAACTGTAGCAAATCATTCACCTGCGT........................................................................................................................................................... 29 0 1 4.00 4 4 0 0 0 0 0
........................................................................................ATGCGAAGTCTGTTCCCCT.................................................................................................................................................................................................................................... 19 0 1 3.00 3 3 0 0 0 0 0
........................................................................................ATGCGAAGTCTGTTCCCCTCCGTGGCGT........................................................................................................................................................................................................................... 28 0 1 3.00 3 1 1 0 1 0 0
........................................................................................ATGCGAAGTCTGTTCCCCTCCGTGG.............................................................................................................................................................................................................................. 25 0 1 3.00 3 0 1 1 1 0 0
........................................................................................ATGCGAAGTCTGTTCCCCTCC.................................................................................................................................................................................................................................. 21 0 1 2.00 2 0 1 0 0 0 1
.............................................................................................................................................................................................................GTTTTGGGTCTGCTCACA................................................................................................................ 18 0 1 2.00 2 0 0 2 0 0 0
...............................................................................................................................................CTTCGCAGAGCAACTGTAGCAAATCA...................................................................................................................................................................... 26 0 1 2.00 2 0 2 0 0 0 0
..............................................................................................................................................................................................................TTTTGGGTCTGCTCACAGAT............................................................................................................. 20 0 1 2.00 2 0 0 1 1 0 0
.......................................................................................................................................................AGCAACTGTAGCAAATCATTCACC................................................................................................................................................................ 24 0 1 2.00 2 2 0 0 0 0 0
........................................................................................ATGCGAAGTCTGATCCCCTCCGTG............................................................................................................................................................................................................................... 24 1 1 2.00 2 2 0 0 0 0 0
.........................................................................................................................................................CAACTGTAGCAAATCATTCACCTGC............................................................................................................................................................. 25 0 1 2.00 2 2 0 0 0 0 0
..............................................................................................AGTCTGTTCCCCTCCGTGG.............................................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................TGCGAAGTCTGTTCCCCTCCGTG............................................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0
........................................................................................................................................................................................GTGAAGTTAAATTTGGATGT................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
............................................................................................................................................................................................................GGTTTTGGGTCTGCTCAC................................................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0
........................................................................................ATGCGAACTCTGTTGCCCTCCGTG............................................................................................................................................................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0
........................................................................................................................................................................................GTGAAGTTAAATTTGGATGC................................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................GAGGTTTAAGTACTTCGCAGAGCA.................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 1 0
........................................................................................ATGCGAAGTCTGTTCCCCTCCGCGGC............................................................................................................................................................................................................................. 26 1 1 1.00 1 1 0 0 0 0 0
.........................................................................................................................................................CAACTGTAGCAAATCATTCACCTGCGT........................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................AGTCTGGTCCCCTCCGTGGC............................................................................................................................................................................................................................. 20 1 1 1.00 1 0 0 1 0 0 0
........................................................................................ATGCGAAGTCTGTTCCCCCCCGTGG.............................................................................................................................................................................................................................. 25 1 1 1.00 1 1 0 0 0 0 0
................................................................................................................GCGTCCAGAGATCGCCTTGGA.......................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................TATGCGAAGTCTGTTCCCCTCCGTGG.............................................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................................................................................................................................TTTGGGTCTGCTCACAGAT............................................................................................................. 19 0 1 1.00 1 0 0 1 0 0 0
..............................................................................................AGTCTGTTCCCCTCCGTGGC............................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................................................................CTTCGCAGAGCAACTGTACCAAAT........................................................................................................................................................................ 24 1 1 1.00 1 0 0 0 0 1 0
.................................................................................................................................................TCGCAGAGCAACTGTAGCAAATC....................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0
........................................................................................................CCTCCGTGGCGTCCAGAGATCGCCTTG............................................................................................................................................................................................................ 27 0 1 1.00 1 0 0 1 0 0 0
........................................................................................................................................................................................GTGAAGTTAAATTTGGATGTGG................................................................................................................................. 22 0 1 1.00 1 0 0 1 0 0 0
........................................................................................ATGCGAAGTCTGTTCCCCTCCGTGAC............................................................................................................................................................................................................................. 26 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................................................................CTTCGCAGAGCAACTGTAGCAAATCATT.................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................................................................CTTCGCAGAGCAACTGTAGCAAATC....................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0
..................................................................................................................GTCCAGAGATCGCCTTGGG.......................................................................................................................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0
..................................ATAACCCTACTGCGAGGTG.......................................................................................................................................................................................................................................................................................... 19 3 14 0.07 1 0 1 0 0 0 0
..........................................................................................................................................................................................TAAGTTTATTTTGGATGTGGT................................................................................................................................ 21 3 17 0.06 1 0 0 0 0 1 0
........ACTACTGACTTTTTTACAA.................................................................................................................................................................................................................................................................................................................... 19 2 20 0.05 1 0 1 0 0 0 0

Anti-sense strand reads

GCTGAAACTGATGACAGGAAAAATGTTCCTTAAATATTGGGACAGCGCTCCACTCACTGCTTTGATATCATCTTGCATACATATAAAATACGCTTCAGACAAGGGGAGGCACCGCAGGTCTCTAGCGGAACCTCCAAATTCATGAAGCGTCTCGTTGACATCGTTTAGTAAGTGGACGCAGTTTCACTTCAATTTAAACCTACACCAAAACCCAGACGAGTGTCTAGTGTCGACAGTCTTACGGTGATAGACTTTAGCTGATTGCTAAGTAAGAATAATAACGTCGGTAACTTAATCTGCGGAAGCAACTTGGGCTAGGAAGTGACGACGCTCTC
***********************************************************************************************************************************************************.((((((((((.....((((((.((((((....)).)))).))))))....)).))))))))..(((..((............))..)))..**************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V057
head
 V042
embryo
.............................................CGCTCCACTGACTGCGTTGAT............................................................................................................................................................................................................................................................................. 21 2 1 1.00 1 1 0
.......................................................................................ACACGCTTCAGGCAAGGGAA.................................................................................................................................................................................................................................... 20 3 4 0.25 1 1 0
.....................................................................................................................................................................................................................AGACGGGTGTCTAGTGTT........................................................................................................ 18 2 9 0.11 1 1 0
...............................................................................................................................................................................................................................................................................................................AGGAACTAGGGCTATGAAG............. 19 3 16 0.06 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_6:4506080-4506414 + dpe_1919 CGACTTTGACTACTGTCCTTTTTACAAGGAATTTATAACCCTGTCGCGAGGTGAGTGACGAAACTATAGTAGAACG-------------------------------------------------TATG--TATA--TTTTATGCGAAGTCTGTTCCCCTCCGTGGCGTCCAGAGATCGCCTT-GGAGGTTTAAGTACTTCGCAGAGCAACTGT---AGCA-AATCATTCACCTGCGTCAAAGTGAAGTTAAATTTGGATGTGGTTTTGGGTCTGCTCACAGATCA---------------------------------------------------------------------------------------------------CAGCT----------------------------------------------------------GTCAGAATGC------------------------CACT---------ATCTGAAATC------GACTAA----C-------GAT---------------------------------------------------------T-----CATTCTTA---TTATTGCAGCCATTGAATTAGACGCCTTCGTTGAACCCGATCCTTCACTGCTGCGAGAG
dp5 2:29182099-29182438 + dps_860 CGACTTTGACTACGGTCCTTTTTACAAGGAATTTATAACCCTGTCGCGAGGTGAGTGACGAAACTATAGTAGAACG-------------------------------------------------TATG--TATA--TTTTATGCGAAGTCTGTTCCCCTCCGTGGCGTCCAGAGATCGCCTT-GGAGGTTTAAGTACTTCGCAGAGCAACTGT---AGCA-AATCATTCACCTGCGTCCAAGTGAAGTTAAATTTGGATGTGGTTTTGGGTCTGCTCACAGATCA---------------------------------------------------------------------------------------------------CAGCTA-----------------------------------------------------ACGTGTCAGAATGC------------------------CACT---------ATCTGAAATC------GACTAA----C-------GAT---------------------------------------------------------T-----CATTCTTA---TTATTGCAGCCATTGAATTAGACGCCTTCGTTGAACCCGATCCTTCACTGCTGCGAGAG
droWil2 scf2_1100000004902:4246442-4246749 + dwi_2474 TGAATTTGACTATGAACCGTTCTACAAGGAGTTTATAACCTTGTCGCGAGGTAAGCATTGGAA-------------------G------------------------------------------------GG-C--TGCTGTGCGAAACCTGTTCCCCTTGCTGGCGTGCAGTGATAGCCTT-CAAGGTTTTAAGGTTTCGCAAATCAAATGTACAGAGC-AAAAATTCACCCGCCTCCAAGTGAAGCACTATTGGTCAGCGGTTTTGATTTTGCTTACAGTTTA---------------------------------------------------------------------------------------------------AA--------------------------------------------------------------------AGA---------------CAATCCCAAAC------------------TTC------GATT------------------------------------------------------A------------TAACCTAT-----CCT--------TCTTTATAGCTATTGACATTGATGCCTTTCAAGTGCCAGATGCGCAACTTCTGCGCGAA
droVir3 scaffold_12855:6043390-6043744 + dvi_4147 TGACTTCAACTATGACCCCTTCTACAAGGAGTTCATAACGCTGTCGAGAGGTAAGCAGCCCAA-------------------GCC--------------------TG---------------------GCCAC-A--GGATGTGCGACATCTGTTCCCCTTGCTGGCGTGCAGTTGTAGCCAA-AAAGGTTTTAAGATCTCGCAGAGCAAACT----AAGCAAATGTTTCACTCGCAACCAATCGCAGTTGTATTGGGCTGCGCTTTTGTATTTGCTGACACT---------------------ATTCATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACATATACATATATTTTGATAAGGAAATTAATTGATTGATGTTCAAGAGACTATTTAACTGAACTGCC--------------AATATTATTTCTAGCCATTGAAATAGATTCGTTTCGCGTGCCCGATGCGCAGCTGCAGCGCGAG
droMoj3 scaffold_6540:6362578-6362795 + dmo_1843 TGACTTTGACTACGAGCCCTTCTACAAGGAGTTCATAACGCTGTCGCGAGGTAAGTCGTA-AGC--------------------------------ACATAAGACTC------------------------GC-T--CCACATGCGACATTTGTTCCCCTTGCTGGCGTGCAGCTGTAGCCAG-AAAGGTTTCAAGATGTCGCAGAGCAAACA----GAGCAACTGTTTCACCCGCATCCAACTGAAGTACTATTGGGTTGCGCTTTTGAATTTGCTCACAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_14906:8017254-8017488 - TGACTTTGACTACGAGCCCTTCTACAAGGAGTTCATAACTCTGTCCAGAGGTAGGAGATCA--CTTTCA-------------GAT--------------------TGGGTGTAGCATTTATATTATATA--TA-T--ATTTTTGTGGAATCTGTTCCCCTGGTTGGCGTTGAGTTGTAGCCAA-AAAGGTTTTAAGATTTCGCACAGTAAAC-T---GGGC-AAATGTTCACTCGCATCCAACTCGAGTTGTTGTCGAATGTGCTTTTGGATTTGCCCACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13340:10595153-10595478 - dan_3015 CGACTTCGATTACGAACCGTTTTATAAGGAGTTTATTACACTCTCAAGGGGTACGTTAGA-CACCAAA--------------T------------------------------------------------CC-C--CTCCATGTGATGTCTGTTCCCCTCGCTTACTTTAAA-CTTGGTTTG-GGAGGTTTAAAGACATCGCAGATCAAGCA----GAGC-CATCATTCACCCGCATCCAAGTGAAGACATATTGGATCATGGTTTTAGATGGGCTTACAGTTTC---------------------------------------------------------------------------------------------------CCGTT----------------------------------------------------------TCCTCAA---TATTTAATT------------------------CTATG--------TTTGTCTGATCAAATACT-------GAT---------------------------------------TTTT--------------------GAT--------TCTTTGCAGCTATCGACATTGACGCTTTCCAGGTGCCCGATCCGCACGTGCTTCGCGAG
droBip1 scf7180000396374:479506-479821 + TGACTTCGACTACGAACCGTTTTATAAGGAGTTCATTACGCTCTCAAGGGGTAAGTTAGA-AATCATA--------------G------------------------------------------------TA-C--CTCCATGTTATGTCTGTTCCCCTCGCTTGCTTCGAA-GTTAGTTTG-GGAGGTTTAAAGACATCGCAGATCAAGCA----GAGC-CATCATTCACCCGTATCCAAGTGAAGACTTATTGGATCATGGTTTTAGATGGGCTTACAAT---------------------AATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTCTC-----------------ATAATTT------GATCAAATACTTATACTTAAT---------------------------------------TCTT--------------------GAT--------TATTTGCAGCTATCGACATTGACTCCTTTCAGGTGCCCGATCCTCAGGTCCTTCGCGAG
droKik1 scf7180000302475:376630-376973 - TGACTTTGACTATGAGCCGTTCTACAAGGAGTTTATAACTCTATCAAGAGGTAAGATGA--GAC-ATAAAAAAAGT-------------------------------------------------TAAT--TACTTCCCAAGTTCGAAGTCTGTTCCCCTCGTTGGTGTTCAAGTCTCGCCGG-AGAGGTTTTAAGACTTCGCAGATCAAACAT---GAGC-AATCATTCACCCGCGTCCAAGTGAAGTCCAATTAGCTTGTGGTTTTGGATTGGCTTACATGCAA---------------------------------------------------------------------------------------------------CTTAT----------------------------------------------------------GTCTTTATTT-----A------------------CATTAAATTATT-ACATAAAATCTGGTCTGATTAA----C-------GTT---------------------------------------------------------T-----CGT--------TTTTTGCAGCCATCGAACTCGACGCCTTTCAGGTACCGGATGCCCAGGTTCTTCGCGAG
droFic1 scf7180000453488:617302-617670 - TGATTTTGACTACGAGCCGTTCTACAAGGAATTTATCACTTTATCAAGGGGTAAGCTTATAAAT--------------------------------GTATT----------------TTT--TTC--GGATTT-T--ATTTTTGCGAAGTCTGTTCCCCTGGTTGGCGTTTTATTTTCGTCGG-TAAGGTTTTAAGACTTCGCAGATTAACCTT---GAGC-AATCATTCACCCGCGTCCAAGTGAAGCCCAATTGGTTTGTGGTTTTGGATTGGCTTACAAATCTTTATATACAATCTAGATGAATAATATATTATACTACTTGTAA-------------------------------------------------------------------------------------------------------------------------------GGC----------------CA--CCCTTTTT---------A---------------------------------------------------------------------TACTATTTTT-ACT---------AATATTGAGGTGTT---CACTTTACAGCTATTGAACTGGACGCCTTTCAAGAGCCAGACGCCCAGATGCTACGCGAG
droEle1 scf7180000491080:2467012-2467395 - TGACTTCGACTACGAGCCGTTCTACAAGGAGTTCATTACGCTCTCAAGGGGTAAGAAA---------------ATGTTTGGTTATT--TTAATGAAGTCAT----------------TTC--TTC--AAGATG-T--TCATATGCGAAGTCTGTTCCCCTCGTTGGCGTTTAAATTTGGCCTT-TGAGGTTTTAAGACTTCGCAGATCAATCAT---GTGC-AATCATTCACCCGCGTCCAAGTGAAGCCCAATTGGCTCGTGGTTTTGGATTGGCTTACAAGCCATTAAAT----------------------------------AAAGCCACTCAATATTTATTTAAGT--------TATATAATTTTAAGATCTCCTTTTCTAAATTATTGAAGTAA--------------------------------------------------CA---------------------CAACTC----------------------------------------------------------------------------------------------T---------------------TAT--------CCCTCGCAGCCATCGAACTGGACGCCTTCCAAGTGCCAGATGCCCAGATGCTCCGCGAG
droRho1 scf7180000779097:84384-84748 - TGACTTCGACTACGAGCCGTTCTATAAGGAGTTCATCACACTCTCAAGAGGTAAGATATG-AAGAATTA--------------------------------TTATTA-GTGGA----AAC--TTT--AAGTTA-T--ACATATGCGGAGTCTGTTCCCCTCGTAGGCGTTTAAGTTTCGCCTT-GGAGGTTTTAAGACTTCGCAGATCAATCAT---GAGC-AATCATTCACCCGCGTCCAAGTGAAGTCCAATTGGTTCGTGGTTTTGGATTGGCTTACAAGCCATAAAAT-------------------------------------------------CTATTTAAGGAATGGCAATTTATA----------------------GTT----------------------------------------------------------TTTAGT---------------------ATCCCCCTTCT---------A---------------------------------------------------------------------GATTACCTTTAACT---------AA-----T-----T---CTCTTTTCAGCCATCGAACTAGACGCCTTTCAAGTGCCAGATGCCCAAATGCTCCGCGAG
droBia1 scf7180000302075:3526755-3527111 - TGACTTTGATTACGAGCCTTTTTACAAAGAATTCATCACTCTTTCAAGAGGTAAGTCAAAGCAATGGCAT-----GTAA---------------GATCAAC----------------TTC--TTT--AAGTTT-T--ACACATGCGAAGTCTGTTCCCCTTCTTGGCGTTGAGTTTTCGCTTG-GGCGGTTTTAAGACTTCGCAGATCAAACAA---GAGC-AATCATTCACCCGCGTCCAAGTGAAGCCCAATGGGTTCGTGGTTTTGGATTGGCTTACAAG---------------------TATAACT----------------------------------------------------------------------------------------------------------------------------------------------------ATTCCATTCTATT-------------------CCATC--------GTTG-------------------------------------------------ACGATAAAAATGCTCTTTAGTAATAGATCC--------------CAT-CTCTTTACAGCCATTGAAATGGACTCCTTTAAAGTACCAGATGCCCAAATGCTGCGAGAG
droTak1 scf7180000415763:204600-204857 - T--------------------------------------------------------------------------------------------------------------------------------------------ATGCGAAGTCTGTTCCCCTTGCTGGCGTTGAATTTTCGCCTG-GGAGGTTTAAAGACTTCGCAGATGAAATAT---GAGC-AATCATTCACCCGCGTCCAAGTGAAGCTCAATTGGTGCGTGGTTTTGGATTGGCTTACAAT---------------------ACTAAAA----------------------------------------------------------------------------------------------------------------------------------------------------ATGTCTTTAAATAAGACTATTCCTTAT---------A---------------------------------------------------------------------GATAATATTTAATAATAAAACC--------------TAT-TTTCTAACAGCCATTGAAATGGACGCCTTTCAAATACCAGATGCCCAAATGCTGCGCGAG
droEug1 scf7180000409797:860738-861088 + TGACTTTGACTACGAGCCTTTCTACAAGGAGTTCATCACGCTTTCAAGAGGTAATTGTTTAAA-------------------T------------------------------------------------GT-C--ACATATGCGAAGTCTGTTCCCCTCATTGGCATTAAATTTTTGTCTA-GGAGGTTTTAAGACTTTGCAGATTAAACAT---AAGC-AATCATTCACCCGCGACCAAGTGAAGTCTATTTGGTTCGTGGTTTTGGATTGGCTTACAAGGCA---------------------------------------------------------------------------------------------------AAATTATTAAAACAAGAGTAAAGTACAAAATTTATATAAAATAAGTTATCCTTACTTTGATATATTAGTTTAC------------------------TA-----------------------------------------------------------------------------------------------------C--AT-----TT--------TTATTTACAGCCATCGAATTGGATGCCTTTCAAGAACCGGATCCTCAAATGCTGCGAGAA
dm3 chr3R:7236483-7236827 + TGACTTTGACTACGAGCCGTTTTACAAGGAGTTCATCACGTTGTCAAGAGGTAAGTCCTTTAA-------------------GTCTGC------TATTCAT----------------TTC--TTA--TGGGTT-T--TAATGTGCGAAGTCTGTTCCCCTGTTTGGCGTTCAATTTTCGCCTG-AAAGGTTTTAAGACTTCGTAGATCAAATAT---AAGC-AATCATTCACCCGCATCCAAGTGAAGCTCAATTGGTTCGTGGTTTTGGATTGGCTTACAAG---------------------AATAATA----------------------------------------------------------------------------------------------------------------------------------------------------AAATAAATATATAGCAATCCGTACACT---------A---------------------------------------------------------------------GATGATGTTTAATGA--GGACC--------------T----TTTTTGCAGCTATCGAACTGGACGCCTTCCAGGTGCCAGATGCCCAGATGCTGCGCGAA
droSim2 3r:13864917-13865261 - dsi_17710 TGATTTTGACTACGAGCCGTTTTACAAGGAGTTCATCACGTTGTCAAGAGGTAAGTCTTT-----------------CT---GTCTGT------TATTCAT----------------TTC--GTA--GGGTTT-T--CAATGTGCGAAGTCTGTTCCCCTGTTTGGCGTTCAATTTTCGCCTG-AAAGGTTTTAAGACTTCGCAGATCAAATAT---GAGC-AATCATTCACCCGCATCCAAGTGAAGCTCAATTGGTTCGTGGTTTTGGATTGGCTTACAAG---------------------AATAATA----------------------------------------------------------------------------------------------------------------------------------------------------AAATAAATGTATAACAATACTACCATT---------A---------------------------------------------------------------------TATGATATTTAATGA--TAACC--------------TA---TTTTTGCAGCCATCGAACTGGACTCTTTCCAGGTGCCAGATGCCCAGATGCTGCGCGAA
droSec2 scaffold_0:14727123-14727468 - dse_524 TGACTTTGACTACGAGCCGTTTTACAAGGAGTTCATCACGTTGTCAAGAGGTAAGTCTTT-----------------CT---GTCTAT------TATTCAT----------------TTC--TTA--GGGTTT-T--CAATGTGCGAAGTCTGTTCCCCTGTTTGGCGTTCAATTTTCGCCTAAAAAGGTTTTAAGACTTCGCAGATGAAATAT---GAGC-AATCATTCACCCGCATCCAAGTGAAGCTCAATTGGTTCGTGGTTTTGGATTGGCTTACAAG---------------------AATAATA----------------------------------------------------------------------------------------------------------------------------------------------------AAATAAATATATAACAATCCTCACATT---------A---------------------------------------------------------------------GATGATATTTAATGA--GAACC--------------TA---TTTTTGCAGCCATCGAACTGGACTCTTTCCAGGTGCCAGATGCCCAGATGCTGCGCGAA
droYak3 3R:11269318-11269675 + dya_1009 TGACTTTGACTATGAGCCGTTCTACAAGGAGTTCATCACGCTGTCAAGAGGTACGTCCTCAAACTTTAAT-----TTTT---------------GAGTAAT----------------TTC--TTA--GGTTTT-T--TAATGTGCGAAATCTGTTCCCCTCGTTGGCGTTCAATTTTCGCCTG-TAAGGTTTTAAGATTTCGCAGATCAAATAT---AAGC-AATCATTCACCCGCGTCCAAGTGAAGCACAATTGGTTCGTGGTTTTGGATTGGCTTACAAA---------------------ATTCCTA-----------------------------------------------------------------------------CT----------------------------------------------------------TTCAG-----TAAATAATATTATTCCAATCTAAACATT---------T---------------------------------------------------------------------GTTTATATTTAATGA---AACA--------------TC---TTTTTACAGCTATCGAGCTAGACGCCTTTCAGGTGCCGGATGCCCAGATGCTGCGCGAG
droEre2 scaffold_4770:14386240-14386471 - der_627 TGACTTTGACTACGAGCCCTTTTACAAGGAGTTCATCACGCTGTCAAGAGGTAAGTCCTCGAACTACAAT-----TTTT---------------CAGTAAT----------------TTC--TTA--AGGTTT-T--CAATATGCGAAGTC-GTTCCCCTCATTGGCGTTCAATTTTCGCCTG-TAAGGTTTTAAGACTCCGCAGAACAATTAT---AAGC-AATCATTCACCCGCGTCCAAGTGAAGCTCAATTGGTTCGTGGTTTTGGATTTGCTTACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
CGACTTTGACTACTGTCCTTTTTACAAGGAATTTATAACCCTGTCGCGAGGTGAGTGACGAAACTATAGTAGAACG-------------------------------------------------TATG--TATA--TTTTATGCGAAGTCTGTTCCCCTCCGTGGCGTCCAGAGATCGCCTT-GGAGGTTTAAGTACTTCGCAGAGCAACTGT---AGCA-AATCATTCACCTGCGTCAAAGTGAAGTTAAATTTGGATGTGGTTTTGGGTCTGCTCACAGATCA---------------------------------------------------------------------------------------------------CAGCT----------------------------------------------------------GTCAGAATGC------------------------CACT---------ATCTGAAATC------GACTAA----C-------GAT---------------------------------------------------------T-----CATTCTTA---TTATTGCAGCCATTGAATTAGACGCCTTCGTTGAACCCGATCCTTCACTGCTGCGAGAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................................................................................................ATGCGAAGTCTGTTCCCCTCCGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24124.00241623003
.............................................................................................................................................ATGCGAAGTCTGTTCCCCTCCGTGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26112.0012930000
.......................................................................................................................................................................GTCCAGAGATCGCCTT-GGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.004400000
.............................................................................................................................................................................................................AGCAACTGT---AGCA-AATCATTCACCTGCGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2914.004400000
.............................................................................................................................................ATGCGAAGTCTGTTCCCCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.003300000
.............................................................................................................................................ATGCGAAGTCTGTTCCCCTCCGTGGCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.003110001
.............................................................................................................................................ATGCGAAGTCTGTTCCCCTCCGTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.003011001
.............................................................................................................................................ATGCGAAGTCTGTTCCCCTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002010100
.......................................................................................................................................................................................................................................................................GTTTTGGGTCTGCTCACA................................................................................................................................................................................................................................................................................................................................................................................................1812.002002000
.....................................................................................................................................................................................................CTTCGCAGAGCAACTGT---AGCA-AATCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002020000
........................................................................................................................................................................................................................................................................TTTTGGGTCTGCTCACAGAT.............................................................................................................................................................................................................................................................................................................................................................................................2012.002001001
.............................................................................................................................................................................................................AGCAACTGT---AGCA-AATCATTCACC................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002200000
...............................................................................................................................................................................................................CAACTGT---AGCA-AATCATTCACCTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002200000
...................................................................................................................................................AGTCTGTTCCCCTCCGTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
..............................................................................................................................................TGCGAAGTCTGTTCCCCTCCGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
..................................................................................................................................................................................................................................................GTGAAGTTAAATTTGGATGT...................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
......................................................................................................................................................................................................................................................................GGTTTTGGGTCTGCTCAC.................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
..................................................................................................................................................................................................................................................GTGAAGTTAAATTTGGATGC...................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.........................................................................................................................................................................................GAGGTTTAAGTACTTCGCAGAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000010
...............................................................................................................................................................................................................CAACTGT---AGCA-AATCATTCACCTGCGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.....................................................................................................................................................................GCGTCCAGAGATCGCCTT-GGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
............................................................................................................................................TATGCGAAGTCTGTTCCCCTCCGTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.........................................................................................................................................................................................................................................................................TTTGGGTCTGCTCACAGAT.............................................................................................................................................................................................................................................................................................................................................................................................1911.001001000
...................................................................................................................................................AGTCTGTTCCCCTCCGTGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.......................................................................................................................................................................................................TCGCAGAGCAACTGT---AGCA-AATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
.............................................................................................................................................................CCTCCGTGGCGTCCAGAGATCGCCTT-G................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000
..................................................................................................................................................................................................................................................GTGAAGTTAAATTTGGATGTGG.................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000
.....................................................................................................................................................................................................CTTCGCAGAGCAACTGT---AGCA-AATCATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.....................................................................................................................................................................................................CTTCGCAGAGCAACTGT---AGCA-AATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
.......................................................................................................................................................................GTCCAGAGATCGCCTT-GGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
dp5
CGACTTTGACTACGGTCCTTTTTACAAGGAATTTATAACCCTGTCGCGAGGTGAGTGACGAAACTATAGTAGAACG-------------------------------------------------TATG--TATA--TTTTATGCGAAGTCTGTTCCCCTCCGTGGCGTCCAGAGATCGCCTT-GGAGGTTTAAGTACTTCGCAGAGCAACTGT---AGCA-AATCATTCACCTGCGTCCAAGTGAAGTTAAATTTGGATGTGGTTTTGGGTCTGCTCACAGATCA---------------------------------------------------------------------------------------------------CAGCTA-----------------------------------------------------ACGTGTCAGAATGC------------------------CACT---------ATCTGAAATC------GACTAA----C-------GAT---------------------------------------------------------T-----CATTCTTA---TTATTGCAGCCATTGAATTAGACGCCTTCGTTGAACCCGATCCTTCACTGCTGCGAGAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................................................................................ATGCGAAGTCTGTTCCCCTCCGTGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26116.001601231000000
.............................................................................................................................................ATGCGAAGTCTGTTCCCCTCCGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24113.001301100002000
.............................................................................................................................................ATGCGAAGTCTGTTCCCCTCCGTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2518.0080600101000
.....................................................................................................................................................................................................CTTCGCAGAGCAACTGT---AGCA-AATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2514.0040200000020
......................................................................................................................................................................................................TTCGCAGAGCAACTGT---AGCA-AATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030210000000
.....................................................................................................................................................................................................CTTCGCAGAGCAACTGT---AGCA-AATCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030300000000
.............................................................................................................................................ATGCGAAGTCTGTTCCCCTCCGTGGCGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.0020001001000
.....................................................................................................................................................................................................CTTCGCAGAGCAACTGT---AGCA-AATCATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020110000000
...................................................................................................................................................................................................................................................................TGTGGTTTTGGGTCTGCTCAC.................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000011000
.....................................................................................................................................................................................................CTTCGCAGAGCAACTGT---AGCA-AAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020100000010
.............................................................................................................................................ATGCGAAGTCTGTTCCCCTCCGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020010100000
.......................................................................................................................................................................................................................................................................GTTTTGGGTCTGCTCACAGAT.............................................................................................................................................................................................................................................................................................................................................................................................2112.0020200000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGATCCTTCACTGCTGCGAGAG2312.0020200000000
..............................................................................................................................................TGCGAAGTCTGTTCCCCTCCGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020200000000
..............................................................................................................................................TGCGAAGTCTGTTCCCCTCCGTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020200000000
.............................................................................................................................................ATGCGAAGTCTGTTCCCCTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020101000000
...........................................................................................................................................................CCCCTCCGTGGCGTCCAGAGATCGCCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000001000
.....................................................................................................................................................................................................CTTCGCAGAGCAACTGT---AGCA-AATCAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010000000
.....................................................................................................................................................................................................CTTCGCAGAGCAACTGT---AGCA-A..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010000
..............................................................................................................................................TGCGAAGTCTGTTCCCCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
..........................................................................................................................................................TCCCCTCCGTGGCGTCCAGAGATCGCCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
..............................................................................................................................................TGCGAAGTCTGTTCCCCTCCGTGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
...................................................................................................................................................................................................................TGT---AGCA-AATCATTCACCTGCGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.............................................................................................................................................ATGCGAAGTCTGTTCCCCTCCGTGGCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
...................................................................................................................................................................................................................................................................TGTGGTTTTGGGTCTGCTCACA................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.....................................................................................................................................................................................................................T---AGCA-AATCATTCACCTGCGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
...................................................................................................................................................AGTCTGTTCCCCTCCGTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
....................................................................................................................................................................................................................GT---AGCA-AATCATTCACCTGCGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001000000
.....................................................................................................................................................................GCGTCCAGAGATCGCCTT-GGAGGTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010000000
.......................................................................................................................................................................................................TCGCAGAGCAACTGT---AGCA-AATCATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010001000000
..............................ATTTATAACCCTGTCGCGAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..................................................................................................................................................................................................GTACTTCGCAGAGCAACTGT---A...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.......................................................................................................................................................................................................TCGCAGAGCAACTGT---AGCA-AATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
............................................................................................................................................................................GAGATCGCCTT-GGAGGTTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
...............................................................................................................................................................................................................................ATCATTCACCTGCGTCCAAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAACCCGATCCTTCACTGCTGC.....2411.0010000100000
.....................................................................................................................................................................................................CTTCGCAGAGCAACTGT---AGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...................................................................................................................................................................................................................................................................TGTGGTTTTGGGTCTGCTCACAGAT.............................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
...................................................................................................................................................................................................................................................................TGTGGTTTTGGGTCTGCTCA..................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.......................................................................................................................................................................................................................................CCTGCGTCCAAGTGAAGTTAAATTTG........................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.........................................................................................................................................................................................................................................................................TTTGGGTCTGCTCACAGATT............................................................................................................................................................................................................................................................................................................................................................................................2020.5011000000000
droWil2
TGAATTTGACTATGAACCGTTCTACAAGGAGTTTATAACCTTGTCGCGAGGTAAGCATTGGAA-------------------G------------------------------------------------GG-C--TGCTGTGCGAAACCTGTTCCCCTTGCTGGCGTGCAGTGATAGCCTT-CAAGGTTTTAAGGTTTCGCAAATCAAATGTACAGAGC-AAAAATTCACCCGCCTCCAAGTGAAGCACTATTGGTCAGCGGTTTTGATTTTGCTTACAGTTTA---------------------------------------------------------------------------------------------------AA--------------------------------------------------------------------AGA---------------CAATCCCAAAC------------------TTC------GATT------------------------------------------------------A------------TAACCTAT-----CCT--------TCTTTATAGCTATTGACATTGATGCCTTTCAAGTGCCAGATGCGCAACTTCTGCGCGAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................................................................................................................................GTGCGAAACCTGTTCCCCTTGCTGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.00420020
.............................................................................................................................................GTGCGAAACCTGTTCCCCTTGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.00301110
......................................................................................................................................................................................................TTCGCAAATCAAATGTACAGAGC-...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
......................................................................................................................................................................................................TTCGCAAATCAAATGTACAGAGC-AAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100001
....................................................................................................................................................................................................................................................................GCGGTTTTGATTTTGCTTACAGTT.............................................................................................................................................................................................................................................................................................................................................................................................2411.00110000
..................................................................................................................................................................................................................................................GTGAAGCACTATTGGTCAGCGGTTTTGA...........................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100
.............................................................................................................................................GTGCGAAACCTGTTCCCCTTGCTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
.............................................................................................................................................GTGCGAAACCTGTTCCCCTTGCTGGCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100
..............................................................................................................................................TGCGAAACCTGTTCCCCTTGCTGGCGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100001
..................................................................................................................................................................................................................................................................CAGCGGTTTTGATTTTGCTTACAGTT.............................................................................................................................................................................................................................................................................................................................................................................................2611.00100001
.............................................................................................................................................GTGCGAAACCTGTTCCCCTTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001
.............................................................................................................................................GTGCGAAACCTGTTCCCCTTGCTGGCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
.............................................................................................................................................................CCTTGCTGGCGTGCAGTGATAGCCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100001
....................................................................................................................................................................................................................GTACAGAGC-AAAAATTCACCCGCCTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
............................................................................................................................................................................................................................................................ATTGGTCAGCGGTTTTGAT..........................................................................................................................................................................................................................................................................................................................................................................................................1911.00100001
........................................................................................................................................................................................................................................................................TTTTGATTTTGCTTACAGTTT............................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
...................................................................................................................................................................................................................................................................AGCGGTTTTGATTTTGCTTACAGTT.............................................................................................................................................................................................................................................................................................................................................................................................2511.00100001
...................................................................................................................................................AACCTGTTCCCCTTGCTGGCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
................................................................................................................................................................................................................................................................GTCAGCGGTTTTGATTTTGCTTACA................................................................................................................................................................................................................................................................................................................................................................................................2511.00100001
.........................................................................................................................................................................................................................GAGC-AAAAATTCACCCGCCTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
......................................................................................................................................................................................................TTCGCAAATCAAATGTACAGAGC-AAAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000
...................................................................................................................................................AACCTGTTCCCCTTGCTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100001
droVir3
TGACTTCAACTATGACCCCTTCTACAAGGAGTTCATAACGCTGTCGAGAGGTAAGCAGCCCAA-------------------GCC--------------------TG---------------------GCCAC-A--GGATGTGCGACATCTGTTCCCCTTGCTGGCGTGCAGTTGTAGCCAA-AAAGGTTTTAAGATCTCGCAGAGCAAACT----AAGCAAATGTTTCACTCGCAACCAATCGCAGTTGTATTGGGCTGCGCTTTTGTATTTGCTGACACT---------------------ATTCATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACATATACATATATTTTGATAAGGAAATTAATTGATTGATGTTCAAGAGACTATTTAACTGAACTGCC--------------AATATTATTTCTAGCCATTGAAATAGATTCGTTTCGCGTGCCCGATGCGCAGCTGCAGCGCGAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................GTGCGACATCTGTTCCCCTTGCTGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26174.00742000000000000000000000000000000000000000000000000000000000000072
.............................................................................................................................................GTGCGACATCTGTTCCCCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1918.008101000000000000000000000000000000000000000000000000000000000006
.............................................................................................................................................GTGCGACATCTGTTCCCCTTGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2317.007006000000000000010000000000000000000000000000000000000000000000
.............................................................................................................................................GTGCGACATCTGTTCCCCTTGCTGGCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2816.006000000000000000000000000000000000000000000000000000000000000033
......................................................................................................................................................................................................CTCGCAGAGCAAACT----AAGCAAATGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................2515.005000000000000001120000000000000000000000000000000000000000000010
.............................................................................................................................................GTGCGACATCTGTTCCCCTTGCTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2515.005001000000000000000000000000000000000000000000000000000000000004
.....................................................................................................................................................................................................TCTCGCAGAGCAAACT----AAGCAAATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2515.005101000000000001010000000000000000000000000000000000000000000010
......................................................................................................................................................................................................CTCGCAGAGCAAACT----AAGCAAAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2315.005002000000000000110000000000000000000000000000000000000000000010
...................................................................................................................................................................................................................................................................TGCGCTTTTGTATTTGCTGACACT---------------------A........................................................................................................................................................................................................................................................................................................................................................................2514.004002000000000000101000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................TCTCGCAGAGCAAACT----AAGCAAAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.003002000000000000010000000000000000000000000000000000000000000000
......................................................................................................................................................................................................CTCGCAGAGCAAACT----AAGCAAATGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.003001000000000000200000000000000000000000000000000000000000000000
......................................................................................................................................................................................................CTCGCAGAGCAAACT----AAGCAAATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.003001000000000001000000000000000000100000000000000000000000000000
.............................................................................................................................................GTGCGACATCTGTTCCCCTTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.003000000000000000000000000000000000000000000000000000000000000003
.......................................................................................................................................................................................................TCGCAGAGCAAACT----AAGCAAATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002001000000000000010000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................TTTCACTCGCAACCAATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002000000000000000000000000000000000000000000000000000000000000002
..............................................................................................................................................TGCGACATCTGTTCCCCTTGCTGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002000000000000000000000000000000000000000000000000000000000000002
.............................................................................................................................................GTGCGACATCTGTTCCCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002100000000000000000000000000000000000000000000000000000000000001
.......................................................................................................................................................................................................TCGCAGAGCAAACT----AAGCAAATGTTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002000000000000000200000000000000000000000000000000000000000000000
.............................................................................................................................................GTGCGACATCTGTTCCCCTTGCTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002000000000000000000000000000000000000000000000000000000000000002
......................................................................................................................................................................................................CTCGCAGAGCAAACT----AAGCAAATGTTTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.002000000000000000000000000000000010000000000000000000000000000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCAAGAGACTATTTAACTGAA...................................................................................2311.001010000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................TTGGGCTGCGCTTTTGTATTTG......................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................................................................................GTATTGGGCTGCGCTTTTGTAT.........................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000100000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................TCTGTTCCCCTTGCTGGCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................TCGCAGAGCAAACT----AAGCAAATGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000001000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................GATCTCGCAGAGCAAACT----AAGCAAATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000100000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................CACTCGCAACCAATCGCAGTTGTATT..........................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000010000000000000000000000000000000000
...................................................................................................................................................................................................................................................CGCAGTTGTATTGGGCTGCGCTTTTGTATTTGCTGACACT---------------------.........................................................................................................................................................................................................................................................................................................................................................................4011.001000000000000000000000000000000000000000000000000000000010000000
......................................................................................................................................................................................................................................................AGTTGTATTGGGCTGCGCTTTTGTATT........................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000010
...................................................................................................................................................................................................GATCTCGCAGAGCAAACT----AAGCAAAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000100000000000000000000000000000000000000000000000
..............................................................................................................................................TGCGACATCTGTTCCCCTTGCTGGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGATTCGTTTCGCGTG........................1811.001000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................AGGTTTTAAGATCTCGCAGAGCAAACT----................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................CCCCTTGCTGGCGTGCAGTTGTAGCCAA-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000100000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................GCGCTTTTGTATTTGCTGACACT---------------------A........................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................TTTGTATTTGCTGACACT---------------------A........................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................GTTCCCCTTGCTGGCGTGCAGTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000010000000000000000000000000000000000000000000000
.................................................................................................................................................................GCTGGCGTGCAGTTGTAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................................CTCGCAGAGCAAACT----AAGCAAATGTTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000001000
................................................................................................................................................................................................................................................AATCGCAGTTGTATTGGGC......................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................................ATCTGTTCCCCTTGCTGGCGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................TTTGTATTTGCTGACACT---------------------.........................................................................................................................................................................................................................................................................................................................................................................1811.001010000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................TCGCAGAGCAAACT----AAGCAAATGTTTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000010000000000000000000000000000000
..................................................................................................................................................ACATCTGTTCCCCTTGCTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................TGCGACATCTGTTCCCCTTGCTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................CATCTGTTCCCCTTGCTGGCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000100000000000000000000000000000000000000000000000000
.............................................................................................................................................GTGCGACATCTGTTCCCCTTGCTGGCGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001000000000000000000000000000000000000000000000000000000000000100
.............................................................................................................................................................CCTTGCTGGCGTGCAGTTGTAGCCAA-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000100000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................CGCTTTTGTATTTGCTGACACT---------------------A........................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................TCGCAACCAATCGCAGTTGTATTGGGC......................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000010000
..........................................................................................................................................................................................................................................................GTATTGGGCTGCGCTTTTGTATT........................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000010000000000000000000000000000000
...........................................................................................................................................................................................................................GCAAATGTTTCACTCGCAACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................CGCAGAGCAAACT----AAGCAAATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................................................ATTGGGCTGCGCTTTTGTATTTGCTGACACT---------------------A........................................................................................................................................................................................................................................................................................................................................................................3211.001000000000000000000000000000000000000000000000000000000001000000
.................................................................................................................................................................GCTGGCGTGCAGTTGTAGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGTTTCGCGTGCCCGATG.................2111.001000000000000000000000000000000000000000000000000000000000000100
....................................................................................................................................................ATCTGTTCCCCTTGCTGGCGTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000001
.......................................................................................................................................................................................................................................................................CTTTTGTATTTGCTGACACT---------------------A........................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................TCGCAGAGCAAACT----AAGCAAATGTTTCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000100000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................TCGCAGTTGTATTGGGCTG....................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................GTGCGACATCTGTTCCCCTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000001
droMoj3
TGACTTTGACTACGAGCCCTTCTACAAGGAGTTCATAACGCTGTCGCGAGGTAAGTCGTA-AGC--------------------------------ACATAAGACTC------------------------GC-T--CCACATGCGACATTTGTTCCCCTTGCTGGCGTGCAGCTGTAGCCAG-AAAGGTTTCAAGATGTCGCAGAGCAAACA----GAGCAACTGTTTCACCCGCATCCAACTGAAGTACTATTGGGTTGCGCTTTTGAATTTGCTCACAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................................................................................................................................................................................................GTCGCAGAGCAAACA----GAGCAACTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................25119.00193000115
......................................................................................................................................................................................................GTCGCAGAGCAAACA----GAGCAACTGTTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................27115.0015800007
......................................................................................................................................................................................................GTCGCAGAGCAAACA----GAGCAACTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2419.009300006
.....................................................................................................................................................................................................TGTCGCAGAGCAAACA----GAGCAACTGTTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2815.005100004
......................................................................................................................................................................................................GTCGCAGAGCAAACA----GAGCAACTGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.004200002
.....................................................................................................................................................................................................TGTCGCAGAGCAAACA----GAGCAACTGTTTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2913.003100002
..............................................................................................................................................TGCGACATTTGTTCCCCTTGCTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002200000
......................................................................................................................................................................................................GTCGCAGAGCAAACA----GAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002100001
......................................................................................................................................................................................................GTCGCAGAGCAAACA----GAGCAACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002100001
.............................................................................................................................................ATGCGACATTTGTTCCCCTTGCTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002200000
.....................................................................................................................................................................................................TGTCGCAGAGCAAACA----GAGCAACTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002000101
.............................................................................................................................................ATGCGACATTTGTTCCCCTTGCTGGCGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.002100010
................................................................................................................................................................TGCTGGCGTGCAGCTGTAGCCAG-A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
...................................................................................................................................................................................................................................................TGAAGTACTATTGGGTTG....................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
...........................................................................................................................................................CCCCTTGCTGGCGTGCAGCTGTAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000100
................................................................................................................................................................................................CAAGATGTCGCAGAGCAAACA----................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
............................................................................................................................................................................................GTTTCAAGATGTCGCAGAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
..........................................................................................................................................................................................................................................................CTATTGGGTTGCGCTTTTGAATTTGCTC...................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.........................................................................................................................................................................GCAGCTGTAGCCAG-AAAGGTTTCAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
.............................................................................................................................................ATGCGACATTTGTTCCCCTTGCTGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
..........................................................................................................................................................TCCCCTTGCTGGCGTGCAGCTGTAGCCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
................................................................................................................................................................................................................................................AACTGAAGTACTATTGGGT......................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
.......................................................................................................................................................................................................TCGCAGAGCAAACA----GAGCAACTGTTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.....................................................................................................................................................................................................................................................................CGCTTTTGAATTTGCTCACAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2211.001100000
......................................................................................................................................................................................................GTCGCAGAGCAAACA----GAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
.......................................................................................................................................................................................................TCGCAGAGCAAACA----GAGCAACTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.............................................................................................................................................ATGCGACATTTGTTCCCCTTGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
..............................................................................................................................................TGCGACATTTGTTCCCCTTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..............................................................................................................................................................................................................................ACTGTTTCACCCGCATCCAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.....................................................................................................................................................................................AG-AAAGGTTTCAAGATGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
..........................................................................................................................................................TCCCCTTGCTGGCGTGCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
............................................................................................................................................................................................GTTTCAAGATGTCGCAGAGCAAACA----GAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000001
.............................................................................................................................................ATGCGACATTTGTTCCCCTTGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
......................................................................................................................................................................................................GTCGCAGAGCAAACA----GAGCAACTGTTTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.........................................................................................................................................................................................................GCAGAGCAAACA----GAGCAACTGTTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
........................................................................................................................................................................................AAAGGTTTCAAGATGTCGCAGAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000010
.............................................................................................................................................................CCTTGCTGGCGTGCAGCTGTAGCCAG-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
........................................................................................................................................................................................................................................................TACTATTGGGTTGCGCTTTTGAATTTGCT....................................................................................................................................................................................................................................................................................................................................................................................................2911.001100000
...........................................................................................................................................................................................................................................................TATTGGGTTGCGCTTTTGAATT........................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
........................................................................................................................................................................................................................................................TACTATTGGGTTGCGCTTTTGAATTTGC.....................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.........................................................................................................................................................................................AAGGTTTCAAGATGTCGCAGAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.......................................................................................................................................................................................................TCGCAGAGCAAACA----GAGCAACTGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.......................................................................................................................................................................................................................................................GTACTATTGGGTTGCGCTTTTGA...........................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
.....................................................................................................................................................................................................TGTCGCAGAGCAAACA----GAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
.................................................................................................................................................................GCTGGCGTGCAGCTGTAGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
..................................................................................................................................................................................................AGATGTCGCAGAGCAAACA----GAGCAACTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
droGri2
TGACTTTGACTACGAGCCCTTCTACAAGGAGTTCATAACTCTGTCCAGAGGTAGGAGATCA--CTTTCA-------------GAT--------------------TGGGTGTAGCATTTATATTATATA--TA-T--ATTTTTGTGGAATCTGTTCCCCTGGTTGGCGTTGAGTTGTAGCCAA-AAAGGTTTTAAGATTTCGCACAGTAAAC-T---GGGC-AAATGTTCACTCGCATCCAACTCGAGTTGTTGTCGAATGTGCTTTTGGATTTGCCCACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.....................................................................................................................................................................................................................T---GGGC-AAATGTTCACTCGCATCCA........................................................................................................................................................................................................................................................................................................................................................................................................................................2413.00330
..................................................................................................................................................................................................................................................................ATGTGCTTTTGGATTTGCCCA..................................................................................................................................................................................................................................................................................................................................................................................................2112.00211
..................................................................................................................................................................................................................................................................ATGTGCTTTTGGATTTGCCCACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2312.00211
..................................................................................................................................................................................................................................................................ATGTGCTTTTGGATTTGCCC...................................................................................................................................................................................................................................................................................................................................................................................................2011.00101
...................................................................................................................................................................................................................................................................TGTGCTTTTGGATTTGCCCACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2211.00101
.....................................................................................................................................................................................................................T---GGGC-AAATGTTCACTCGCATCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110
.............................................................................................................................................TTGTGGAATCTGTTCCCCTGGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110
...................................................................................................................................................................................................................................................................TGTGCTTTTGGATTTGCCCA..................................................................................................................................................................................................................................................................................................................................................................................................2011.00101
droAna3
CGACTTCGATTACGAACCGTTTTATAAGGAGTTTATTACACTCTCAAGGGGTACGTTAGA-CACCAAA--------------T------------------------------------------------CC-C--CTCCATGTGATGTCTGTTCCCCTCGCTTACTTTAAA-CTTGGTTTG-GGAGGTTTAAAGACATCGCAGATCAAGCA----GAGC-CATCATTCACCCGCATCCAAGTGAAGACATATTGGATCATGGTTTTAGATGGGCTTACAGTTTC---------------------------------------------------------------------------------------------------CCGTT----------------------------------------------------------TCCTCAA---TATTTAATT------------------------CTATG--------TTTGTCTGATCAAATACT-------GAT---------------------------------------TTTT--------------------GAT--------TCTTTGCAGCTATCGACATTGACGCTTTCCAGGTGCCCGATCCGCACGTGCTTCGCGAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................................................................................................................................................................................................................CATGGTTTTAGATGGGCTTACAGTT.............................................................................................................................................................................................................................................................................................................................................................................................25140.00403730000
...................................................................................................................................................................................................................................................................CATGGTTTTAGATGGGCTTACAGTTT............................................................................................................................................................................................................................................................................................................................................................................................26130.00302730000
.............................................................................................................................................ATGTGATGTCTGTTCCCCTCGCTTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25127.00272610000
....................................................................................................................................................................................................................................................................ATGGTTTTAGATGGGCTTACAGTT.............................................................................................................................................................................................................................................................................................................................................................................................24111.0011920000
....................................................................................................................................................................................................................................................................ATGGTTTTAGATGGGCTTACAGTTT............................................................................................................................................................................................................................................................................................................................................................................................2517.007520000
.............................................................................................................................................ATGTGATGTCTGTTCCCCTCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2215.005210002
......................................................................................................................................................................................................ATCGCAGATCAAGCA----GAGC-CATCATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2615.005220001
.............................................................................................................................................ATGTGATGTCTGTTCCCCTCGCTTACTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2814.004310000
.......................................................................................................................................................................................................TCGCAGATCAAGCA----GAGC-CATCATTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.004310000
........................................................................................................................................................................................................................................................................TTTTAGATGGGCTTACAGTTT............................................................................................................................................................................................................................................................................................................................................................................................2113.003300000
......................................................................................................................................................................................................ATCGCAGATCAAGCA----GAGC-CATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.003210000
.....................................................................................................................................................................................................CATCGCAGATCAAGCA----GAGC-CATCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.003300000
.............................................................................................................................................ATGTGATGTCTGTTCCCCTCGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.003200010
......................................................................................................................................................................................................ATCGCAGATCAAGCA----GAGC-...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.003010011
................................................................................................................................................................................................................................................................GATCATGGTTTTAGATGGGCTTACAGTT.............................................................................................................................................................................................................................................................................................................................................................................................2813.003210000
..................................................................................................................................................................................................................................................................TCATGGTTTTAGATGGGCTTACAGTTT............................................................................................................................................................................................................................................................................................................................................................................................2713.003210000
.................................................................................................................................................................................................................................................................ATCATGGTTTTAGATGGGCTTACAGTTT............................................................................................................................................................................................................................................................................................................................................................................................2812.002200000
.............................................................................................................................................ATGTGATGTCTGTTCCCCTCGCTTACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.002200000
.....................................................................................................................................................................................................CATCGCAGATCAAGCA----GAGC-CATCATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.002200000
.......................................................................................................................................................................................................TCGCAGATCAAGCA----GAGC-CATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002200000
.................................................................................................................................................................................................................................................................ATCATGGTTTTAGATGGGCTTACAGTT.............................................................................................................................................................................................................................................................................................................................................................................................2712.002110000
................................................................................................................................................................................................................................................................GATCATGGTTTTAGATGGGC.....................................................................................................................................................................................................................................................................................................................................................................................................2012.002020000
................................................................................................................................................................................................................AAGCA----GAGC-CATCATTCACCCGCATCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................2712.002200000
.......................................................................................................................................................................................................................................................................GTTTTAGATGGGCTTACAGTTT............................................................................................................................................................................................................................................................................................................................................................................................2212.002200000
......................................................................................................................................................................................................ATCGCAGATCAAGCA----GAGC-CATCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002100010
........................................................................................................................................................................................................CGCAGATCAAGCA----GAGC-CATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.............................................................................................................................................ATGTGATGTCTGTTCCCCTCGCTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.....................................................................................................................................................................................................................................................................TGGTTTTAGATGGGCTTACAGTT.............................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
...................................................................................................................................................................................................................................................................CATGGTTTTAGATGGGCTTACAGT..............................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
....................................................................................................................................................................................................................................................GAAGACATATTGGATCATGGTT...............................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
..................................................................................................................................................................................................................................................................TCATGGTTTTAGATGGGCTTACAGTT.............................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.......................................................................................................................................................................................................................................................................GTTTTAGATGGGCTTACAGTT.............................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
............................................................................................................................................................CCCTCGCTTACTTTAAA-CTTGGTTTG-G................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
..................................................................................................................................................................CTTACTTTAAA-CTTGGTTTG-G................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
..........................................................................................................................................................................AAA-CTTGGTTTG-GGAGGTTTAAAGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000010
................................................................................................................................................................CGCTTACTTTAAA-CTTGGTTTG-G................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000
...............................................................................................................................................GTGATGTCTGTTCCCCTCGCTTAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
.......................................................................................................................................................................................................TCGCAGATCAAGCA----GAGC-CATCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
..........................................................................................................................................................................AAA-CTTGGTTTG-GGAGGTTTAAAGACATC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001010000
..........................................................................................................................................TCCATGTGATGTCTGTTCCCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...............................................................................................................................................................................................TAAAGACATCGCAGATCAAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
..........................................................................................................................................................................AAA-CTTGGTTTG-GGAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
..................................................................................................................................................................................................................................................................TCATGGTTTTAGATGGGCT....................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
....................................................................................................................................................................................................................................................................ATGGTTTTAGATGGGCTTACA................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.......................................................................................................................................................................................................TCGCAGATCAAGCA----GAGC-CATCATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
.....................................................................................................................................................................................................CATCGCAGATCAAGCA----GAGC-C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
......................................................................................................................................................................................................ATCGCAGATCAAGCA----GAGC-CATCATTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
....................................................................................................................................................................................................................................................................ATGGTTTTAGATGGGCTT...................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000
............................................................................................................................................................................................................GATCAAGCA----GAGC-CATCATTCACCCGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
...............................................................................................................................................................................................................................................CAAGTGAAGACATATTGGATC.....................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.............................................................................................................................................ATGTGATGTCTGTTCCCCTCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.....................................................................................................................................................................................................CATCGCAGATCAAGCA----GAGC-CATCATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
........................................................................................................................................................................................................................................................................TTTTAGATGGGCTTACAGTT.............................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.....................................................................................................................................................................................................CATCGCAGATCAAGCA----GAGC-CAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
...................................................................................................................................................................................................................................................................CATGGTTTTAGATGGGCTTACAGC..............................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
......................................................................................................................................................................................................ATCGCAGATCAAGCA----GAGC-CAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
..............................................................................................................................................................................................................................CATCATTCACCCGCATCCAAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.................................................................................................................................................................................................................................CATTCACCCGCATCCAAGTGAAGACAT.............................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
......................................................................................................................................................................................................................................................................GGTTTTAGATGGGCTTACAGTC.............................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
..............................................................................................................................................TGTGATGTCTGTTCCCCTCGCTTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
..............................GTTTATTACACTCTCAAGGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.........................................................................................................................................................................................................................................................................TTTAGATGGGCTTACAGTTT............................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
...................................................................................................................................................................................................................................................................CATGGTTTTAGATGGGCTT...................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
droBip1
TGACTTCGACTACGAACCGTTTTATAAGGAGTTCATTACGCTCTCAAGGGGTAAGTTAGA-AATCATA--------------G------------------------------------------------TA-C--CTCCATGTTATGTCTGTTCCCCTCGCTTGCTTCGAA-GTTAGTTTG-GGAGGTTTAAAGACATCGCAGATCAAGCA----GAGC-CATCATTCACCCGTATCCAAGTGAAGACTTATTGGATCATGGTTTTAGATGGGCTTACAAT---------------------AATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTCTC-----------------ATAATTT------GATCAAATACTTATACTTAAT---------------------------------------TCTT--------------------GAT--------TATTTGCAGCTATCGACATTGACTCCTTTCAGGTGCCCGATCCTCAGGTCCTTCGCGAGSizeHit CountTotal NormTotal
No Reads
droKik1
TGACTTTGACTATGAGCCGTTCTACAAGGAGTTTATAACTCTATCAAGAGGTAAGATGA--GAC-ATAAAAAAAGT-------------------------------------------------TAAT--TACTTCCCAAGTTCGAAGTCTGTTCCCCTCGTTGGTGTTCAAGTCTCGCCGG-AGAGGTTTTAAGACTTCGCAGATCAAACAT---GAGC-AATCATTCACCCGCGTCCAAGTGAAGTCCAATTAGCTTGTGGTTTTGGATTGGCTTACATGCAA---------------------------------------------------------------------------------------------------CTTAT----------------------------------------------------------GTCTTTATTT-----A------------------CATTAAATTATT-ACATAAAATCTGGTCTGATTAA----C-------GTT---------------------------------------------------------T-----CGT--------TTTTTGCAGCCATCGAACTCGACGCCTTTCAGGTACCGGATGCCCAGGTTCTTCGCGAGSizeHit CountTotal NormTotal
No Reads
droFic1
TGATTTTGACTACGAGCCGTTCTACAAGGAATTTATCACTTTATCAAGGGGTAAGCTTATAAAT--------------------------------GTATT----------------TTT--TTC--GGATTT-T--ATTTTTGCGAAGTCTGTTCCCCTGGTTGGCGTTTTATTTTCGTCGG-TAAGGTTTTAAGACTTCGCAGATTAACCTT---GAGC-AATCATTCACCCGCGTCCAAGTGAAGCCCAATTGGTTTGTGGTTTTGGATTGGCTTACAAATCTTTATATACAATCTAGATGAATAATATATTATACTACTTGTAA-------------------------------------------------------------------------------------------------------------------------------GGC----------------CA--CCCTTTTT---------A---------------------------------------------------------------------TACTATTTTT-ACT---------AATATTGAGGTGTT---CACTTTACAGCTATTGAACTGGACGCCTTTCAAGAGCCAGACGCCCAGATGCTACGCGAGSizeHit CountTotal NormTotal
No Reads
droEle1
TGACTTCGACTACGAGCCGTTCTACAAGGAGTTCATTACGCTCTCAAGGGGTAAGAAA---------------ATGTTTGGTTATT--TTAATGAAGTCAT----------------TTC--TTC--AAGATG-T--TCATATGCGAAGTCTGTTCCCCTCGTTGGCGTTTAAATTTGGCCTT-TGAGGTTTTAAGACTTCGCAGATCAATCAT---GTGC-AATCATTCACCCGCGTCCAAGTGAAGCCCAATTGGCTCGTGGTTTTGGATTGGCTTACAAGCCATTAAAT----------------------------------AAAGCCACTCAATATTTATTTAAGT--------TATATAATTTTAAGATCTCCTTTTCTAAATTATTGAAGTAA--------------------------------------------------CA---------------------CAACTC----------------------------------------------------------------------------------------------T---------------------TAT--------CCCTCGCAGCCATCGAACTGGACGCCTTCCAAGTGCCAGATGCCCAGATGCTCCGCGAGSizeHit CountTotal NormTotal
No Reads
droRho1
TGACTTCGACTACGAGCCGTTCTATAAGGAGTTCATCACACTCTCAAGAGGTAAGATATG-AAGAATTA--------------------------------TTATTA-GTGGA----AAC--TTT--AAGTTA-T--ACATATGCGGAGTCTGTTCCCCTCGTAGGCGTTTAAGTTTCGCCTT-GGAGGTTTTAAGACTTCGCAGATCAATCAT---GAGC-AATCATTCACCCGCGTCCAAGTGAAGTCCAATTGGTTCGTGGTTTTGGATTGGCTTACAAGCCATAAAAT-------------------------------------------------CTATTTAAGGAATGGCAATTTATA----------------------GTT----------------------------------------------------------TTTAGT---------------------ATCCCCCTTCT---------A---------------------------------------------------------------------GATTACCTTTAACT---------AA-----T-----T---CTCTTTTCAGCCATCGAACTAGACGCCTTTCAAGTGCCAGATGCCCAAATGCTCCGCGAGSizeHit CountTotal NormTotal
No Reads
droBia1
TGACTTTGATTACGAGCCTTTTTACAAAGAATTCATCACTCTTTCAAGAGGTAAGTCAAAGCAATGGCAT-----GTAA---------------GATCAAC----------------TTC--TTT--AAGTTT-T--ACACATGCGAAGTCTGTTCCCCTTCTTGGCGTTGAGTTTTCGCTTG-GGCGGTTTTAAGACTTCGCAGATCAAACAA---GAGC-AATCATTCACCCGCGTCCAAGTGAAGCCCAATGGGTTCGTGGTTTTGGATTGGCTTACAAG---------------------TATAACT----------------------------------------------------------------------------------------------------------------------------------------------------ATTCCATTCTATT-------------------CCATC--------GTTG-------------------------------------------------ACGATAAAAATGCTCTTTAGTAATAGATCC--------------CAT-CTCTTTACAGCCATTGAAATGGACTCCTTTAAAGTACCAGATGCCCAAATGCTGCGAGAGSizeHit CountTotal NormTotal
No Reads
droTak1
T--------------------------------------------------------------------------------------------------------------------------------------------ATGCGAAGTCTGTTCCCCTTGCTGGCGTTGAATTTTCGCCTG-GGAGGTTTAAAGACTTCGCAGATGAAATAT---GAGC-AATCATTCACCCGCGTCCAAGTGAAGCTCAATTGGTGCGTGGTTTTGGATTGGCTTACAAT---------------------ACTAAAA----------------------------------------------------------------------------------------------------------------------------------------------------ATGTCTTTAAATAAGACTATTCCTTAT---------A---------------------------------------------------------------------GATAATATTTAATAATAAAACC--------------TAT-TTTCTAACAGCCATTGAAATGGACGCCTTTCAAATACCAGATGCCCAAATGCTGCGCGAGSizeHit CountTotal NormTotal
No Reads
droEug1
TGACTTTGACTACGAGCCTTTCTACAAGGAGTTCATCACGCTTTCAAGAGGTAATTGTTTAAA-------------------T------------------------------------------------GT-C--ACATATGCGAAGTCTGTTCCCCTCATTGGCATTAAATTTTTGTCTA-GGAGGTTTTAAGACTTTGCAGATTAAACAT---AAGC-AATCATTCACCCGCGACCAAGTGAAGTCTATTTGGTTCGTGGTTTTGGATTGGCTTACAAGGCA---------------------------------------------------------------------------------------------------AAATTATTAAAACAAGAGTAAAGTACAAAATTTATATAAAATAAGTTATCCTTACTTTGATATATTAGTTTAC------------------------TA-----------------------------------------------------------------------------------------------------C--AT-----TT--------TTATTTACAGCCATCGAATTGGATGCCTTTCAAGAACCGGATCCTCAAATGCTGCGAGAASizeHit CountTotal NormTotal
No Reads
dm3
TGACTTTGACTACGAGCCGTTTTACAAGGAGTTCATCACGTTGTCAAGAGGTAAGTCCTTTAA-------------------GTCTGC------TATTCAT----------------TTC--TTA--TGGGTT-T--TAATGTGCGAAGTCTGTTCCCCTGTTTGGCGTTCAATTTTCGCCTG-AAAGGTTTTAAGACTTCGTAGATCAAATAT---AAGC-AATCATTCACCCGCATCCAAGTGAAGCTCAATTGGTTCGTGGTTTTGGATTGGCTTACAAG---------------------AATAATA----------------------------------------------------------------------------------------------------------------------------------------------------AAATAAATATATAGCAATCCGTACACT---------A---------------------------------------------------------------------GATGATGTTTAATGA--GGACC--------------T----TTTTTGCAGCTATCGAACTGGACGCCTTCCAGGTGCCAGATGCCCAGATGCTGCGCGAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
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Ovary		V064
Ovary		V0642
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Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
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Head		V081
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Embryo		V083
Male-body		V084
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CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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...............................................................................................................................................GCGAAGTCTGTTCCCCTGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................GTGCGAAGTCTGTTCCCCTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCCAGGTGCCAGATGCCC..............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
..ACTTTGACTACGAGCCGTTTTACAAGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.....................................................................................................................................................................................................CTTCGTAGATCAAATAT---AAGC-AATCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................GCGAAGTCTGTTCCCCTGTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................ACTTCGTAGATCAAATAT---AAGC-AATCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................GCTCAATTGGTTCGTGGTTT..............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.............................................................................................................................................GTGCGAAGTCTGTTCCCCTGTTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................TTTCGCCTG-AAAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001
...................................................................................................................................................................................................................................................................CGTGGTTTTGGATTGGCTTACAAG---------------------AA.......................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.................................................................................................................................................................................................................................................AGTGAAGCTCAATTGGTTCGTGG.................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................CGTAGATCAAATAT---AAGC-...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
......TGACTACGAGCCGTTTTACAAGGAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.............................AGTTCATCACGTTGTCAAGAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................CTGTTCCCCTGTTTGGCGTTCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TGATTTTGACTACGAGCCGTTTTACAAGGAGTTCATCACGTTGTCAAGAGGTAAGTCTTT-----------------CT---GTCTGT------TATTCAT----------------TTC--GTA--GGGTTT-T--CAATGTGCGAAGTCTGTTCCCCTGTTTGGCGTTCAATTTTCGCCTG-AAAGGTTTTAAGACTTCGCAGATCAAATAT---GAGC-AATCATTCACCCGCATCCAAGTGAAGCTCAATTGGTTCGTGGTTTTGGATTGGCTTACAAG---------------------AATAATA----------------------------------------------------------------------------------------------------------------------------------------------------AAATAAATGTATAACAATACTACCATT---------A---------------------------------------------------------------------TATGATATTTAATGA--TAACC--------------TA---TTTTTGCAGCCATCGAACTGGACTCTTTCCAGGTGCCAGATGCCCAGATGCTGCGCGAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............................................................................................................................................GTGCGAAGTCTGTTCCCCTGTTTGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26124.0024112280000000100000
.............................................................................................................................................GTGCGAAGTCTGTTCCCCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19113.001352500000000100000
.............................................................................................................................................GTGCGAAGTCTGTTCCCCTGTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23111.0011010100000000000000
.......................................................................................................................................................................................................................................................................GTTTTGGATTGGCTTACAAG---------------------A........................................................................................................................................................................................................................................................................................................................................................................2119.00990000000000000000
.............................................................................................................................................GTGCGAAGTCTGTTCCCCTGTTTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2417.00700070000000000000
.............................................................................................................................................GTGCGAAGTCTGTTCCCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1816.00640200000000000000
....................................................................................................................................................GTCTGTTCCCCTGTTTGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1915.00503110000000000000
.........................................................................................................................................................................................................................................................................TTTGGATTGGCTTACAAG---------------------A........................................................................................................................................................................................................................................................................................................................................................................1912.00210000000001000000
..............................................................................................................................................................................................TTTAAGACTTCGCAGATC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00220000000000000000
.............................................................................................................................................GTGCGAAGTCTGTTCCCCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00211000000000000000
.............................................................................................................................................GTGCGAAGTCTGTTCCCCTGTTTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200020000000000000
..............................................................................................................................................TGCGAAGTCTGTTCCCCTGTTTGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200020000000000000
.............................................................................................................................................GTGCGAAGTCTGTTCCCCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00210100000000000000
.............................................................................................................................................GTGCGAAGTCTGTTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1512.00200000000002000000
......................................................................................................................................................................................................TTCGCAGATCAAATAT---GAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000000000
.....................................................................................................................................................................................................CTTCGCAGATCAAATAT---GAGC-AAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000000000000000
.............................................................................................................................................GTGCGAAGTCTGTTCCCCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000100000
.............................................................................................................................................GTGCGAAGTCTGTTCCCCTGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGAACTGGACTCTTTCCAGGTGCC......................2611.00101000000000000000
.......................................................................................................................................................................................................................................CCCGCATCCAAGTGAAGCTCAAT...........................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000000000000000
..............................................................................................................................................................................TTTCGCCTG-AAAGGTTTTAAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000001000000000
.........................................................................................................................................................................................................................................CGCATCCAAGTGAAGCTCAATTGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000001000000000
.............................................................................................................................................GTGCGAAGTCTGTTCCCAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
....................................................................................................................................................................................CTG-AAAGGTTTTAAGACTTCGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
.............................................................................................................................................GTGCGAAGTCTGTTCCCCTGTTTGGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000000000
.....................................................................................................................................................................................................CTTCGCAGATCAAATAT---GAGC-AATCATTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100100000000000000
.......................................................................................................................................................................................................................................................................GTTTTGGATTGGCTTACAAG---------------------G........................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
........................................................................................................................................................................................AAAGGTTTTAAGACTTCGCAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000100000000
.............................................................................................................................................................................................TTTTAAGACTTCGCAGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010000000000000
...............................................................................................................................................GCGAAGTCTGTTCCCCTGTTTGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000001000000
.................................................................................................................................................................................................................................................AGTGAAGCTCAATTGGTT......................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
.............................................................................................................................................GTGCGAAGTCTGTTCCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.00100000000001000000
......................................................................................................................................................................................................................................................................GGTTTTGGATTGGCTTACAAG---------------------A........................................................................................................................................................................................................................................................................................................................................................................2211.00110000000000000000
.......................................................................................................................................................................GTTCAATTTTCGCCTG-AAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
.....................................................................................................................................................................................................CTTCGCAGATCAAATA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1611.00100000001000000000
.............................................................................................................................................GTGCGAAGTCTGTTCCCCTGTTTGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000000000
.....................................................................................................................................................................................................CTTCGCAGATCAAATAT---GAGC-AATCATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100010000000000000
...................................................................................................................................................AGTCTGTTCCCCTGTTTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000000000
................................................................................................................................................................................................................................................................GTTCGTGGTTTTGGATTGGC.....................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
..........................................................................................................................................................................................................................................................................TTGGATTGGCTTACAAG---------------------A........................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
.............................................................................................................................................................................................................................................................TTGGTTCGTGGTTTTGGATTGGCTTACA................................................................................................................................................................................................................................................................................................................................................................................................2811.00100010000000000000
..........................................................................................................................................................................................................................................................................TTGGATTGGCTTACAAG---------------------G........................................................................................................................................................................................................................................................................................................................................................................1820.50110000000000000000
droSec2
TGACTTTGACTACGAGCCGTTTTACAAGGAGTTCATCACGTTGTCAAGAGGTAAGTCTTT-----------------CT---GTCTAT------TATTCAT----------------TTC--TTA--GGGTTT-T--CAATGTGCGAAGTCTGTTCCCCTGTTTGGCGTTCAATTTTCGCCTAAAAAGGTTTTAAGACTTCGCAGATGAAATAT---GAGC-AATCATTCACCCGCATCCAAGTGAAGCTCAATTGGTTCGTGGTTTTGGATTGGCTTACAAG---------------------AATAATA----------------------------------------------------------------------------------------------------------------------------------------------------AAATAAATATATAACAATCCTCACATT---------A---------------------------------------------------------------------GATGATATTTAATGA--GAACC--------------TA---TTTTTGCAGCCATCGAACTGGACTCTTTCCAGGTGCCAGATGCCCAGATGCTGCGCGAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................................................................................................................................GTGCGAAGTCTGTTCCCCTGTTTGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26186.00863431165
.............................................................................................................................................GTGCGAAGTCTGTTCCCCTGTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2318.0081511
.............................................................................................................................................GTGCGAAGTCTGTTCCCCTGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2115.0051022
.............................................................................................................................................GTGCGAAGTCTGTTCCCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1815.0050041
.......................................................................................................................................................................................................................................................................GTTTTGGATTGGCTTACAAG---------------------A........................................................................................................................................................................................................................................................................................................................................................................2114.0040220
........................................................................................................................................................................................................................................................................TTTTGGATTGGCTTACAAG---------------------A........................................................................................................................................................................................................................................................................................................................................................................2014.0040130
.............................................................................................................................................GTGCGAAGTCTGTTCCCCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030021
.....................................................................................................................................................................................................CTTCGCAGATGAAATAT---GAGC-AATCATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.0030030
.............................................................................................................................................GTGCGAAGTCTGTTCCCCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0021100
.............................................................................................................................................GTGCGAAGTCTGTTCCCCTGTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020101
....................................................................................................................................................................................................................................................................GTGGTTTTGGATTGGCTTACAAG---------------------A........................................................................................................................................................................................................................................................................................................................................................................2412.0020101
.........................................................................................................................................................................................................................................................................TTTGGATTGGCTTACAAG---------------------A........................................................................................................................................................................................................................................................................................................................................................................1912.0020011
..............................................................................................................................................TGCGAAGTCTGTTCCCCTGTTTGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0022000
.................................................................................................................................................................................................................................................................TTCGTGGTTTTGGATTGGCTTACAAG---------------------A........................................................................................................................................................................................................................................................................................................................................................................2712.0020101
.............................................................................................................................................GTGCGAAGTCTGTTCCCCTGTTTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020110
............................................................................................................................................................................................................................................................ATTGGTTCGTGGTTTTGGA..........................................................................................................................................................................................................................................................................................................................................................................................................1912.0020110
.......................................................................................................................................................................................................TCGCAGATGAAATAT---GAGC-AATCATTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020002
........................................................................................................................................................................................................CGCAGATGAAATAT---GAGC-...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020020
..................................................................................................................................................................................................................................................................TCGTGGTTTTGGATTGGCTTACAAG---------------------A........................................................................................................................................................................................................................................................................................................................................................................2612.0021001
.....................................................................................................................................................................................................................................................................TGGTTTTGGATTGGCTTACAAG---------------------A........................................................................................................................................................................................................................................................................................................................................................................2312.0020011
..............................................................................................................................................................................TTTCGCCTAAAAAGGTTTTAAGACTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
..........................................................................................................................................................................................................CAGATGAAATAT---GAGC-AAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
.....................................................................................................................................................................................................CTTCGCAGATGAAATAT---GAGC-AATCTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100
...................................................................................................................................................AGTCTGTTCCCCTGTTTGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
.....................................................................................................................................................................................................................................................................TGGTTTTGGATTGGCTTACAAG---------------------.........................................................................................................................................................................................................................................................................................................................................................................2211.0010010
.................................................................................................................................................................................................................................CATTCACCCGCATCCAAGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
......................................................................................................................................................................................................................................................................GGTTTTGGATTGGCTTACAAG---------------------A........................................................................................................................................................................................................................................................................................................................................................................2211.0010100
..............................................................................................................................................TGCGAAGTCTGTTCCCCTGTTTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000
......................................................................................................................................................................................................................................ACCCGCATCCAAGTGAAGCTCAATT..........................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010001
...................................................................................................................................................................................................................................................................CGTGGTTTTGGATTGGCTTACAAG---------------------A........................................................................................................................................................................................................................................................................................................................................................................2511.0010010
......................................................................................................................................................................................................TTCGCAGATGAAATAT---GAGC-AATCATTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100
.....................................................................................................................................................................................................CTTCGCAGATGAAATAT---GAGC-AATCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
.........................................................................................................................................................................................................GCAGATGAAATAT---GAGC-AAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
............................................................................................................................................................................................................................................ATCCAAGTGAAGCTCAATTGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000
......................................................................................................................................................................................................TTCGCAGATGAAATAT---GAGC-AATCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010001
.....................................................................................................................................................................................................................T---GAGC-AATCATTCACCCGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
...................................................................................................................................................................................................................................................................CGTGGTTTTGGATTGGCTTACAAG---------------------AA.......................................................................................................................................................................................................................................................................................................................................................................2611.0010010
.............................................................................................................................................GTGCGAAGTCTGTTCCCCTGTTTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100
......................................................................................................................................................................................................TTCGCAGATGAAATAT---GAGC-AATCATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000
..........................................................................................................................................................................................................................................................................TTGGATTGGCTTACAAG---------------------A........................................................................................................................................................................................................................................................................................................................................................................1811.0010010
........................................................................................................................................................................................................................................................CTCAATTGGTTCGTGGTTTTGGATT........................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100
......................................................................................................................................................................................................TTCGCAGATGAAATAT---GAGC-AATCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010001
.....................................................................................................................................................................................................CTTCGCAGATGAAATAT---GAGC-AATT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100
.....................................................................................................................................................................................................................................CACCCGCATCCAAGTGAAGCTCAATTG.........................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
.............................AGTTCATCACGTTGTCAAGAGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
......................................................................................................................................................................................................................................ACCCGCATCCAAGTGAAGCTCAATTGG........................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010001
......................................................................................................................................................................................................TTCGCAGATGAAATAT---GAGC-...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
.......GACTACGAGCCGTTTTACAAGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
........................................................................................................................................................................................................................................CCGCATCCAAGTGAAGCTCAATTGGTTC.....................................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000
.......................................................................................................................................................................................................TCGCAGATGAAATAT---GAGC-...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
................................................................................................................................................................................................................................................AAGTGAAGCTCAATTGGTTC.....................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
droYak3
TGACTTTGACTATGAGCCGTTCTACAAGGAGTTCATCACGCTGTCAAGAGGTACGTCCTCAAACTTTAAT-----TTTT---------------GAGTAAT----------------TTC--TTA--GGTTTT-T--TAATGTGCGAAATCTGTTCCCCTCGTTGGCGTTCAATTTTCGCCTG-TAAGGTTTTAAGATTTCGCAGATCAAATAT---AAGC-AATCATTCACCCGCGTCCAAGTGAAGCACAATTGGTTCGTGGTTTTGGATTGGCTTACAAA---------------------ATTCCTA-----------------------------------------------------------------------------CT----------------------------------------------------------TTCAG-----TAAATAATATTATTCCAATCTAAACATT---------T---------------------------------------------------------------------GTTTATATTTAATGA---AACA--------------TC---TTTTTACAGCTATCGAGCTAGACGCCTTTCAGGTGCCGGATGCCCAGATGCTGCGCGAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................................................................................GTGCGAAATCTGTTCCCCTCGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23153.00530251113220000
.............................................................................................................................................GTGCGAAATCTGTTCCCCTCGTTGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26146.00465122310050000
.............................................................................................................................................GTGCGAAATCTGTTCCCCTCGTTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24112.001204101060000
.............................................................................................................................................GTGCGAAATCTGTTCCCCTCGTTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2515.00504000010000
...........................................................................................................................................................................................................................................................AATTGGTTCGTGGTTTTGGA..........................................................................................................................................................................................................................................................................................................................................................................................................2013.00300000030000
.......................................................................................................................................................................................................................................................................GTTTTGGATTGGCTTACAAA---------------------A........................................................................................................................................................................................................................................................................................................................................................................2113.00310101000000
....................................................................................................................................................ATCTGTTCCCCTCGTTGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00210100000000
.......................................................................................................................................................................GTTCAATTTTCGCCTG-TAAGGTTTTAAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.00200000020000
.............................................................................................................................................GTGCGAAATCTGTTCCCCTCGTTGGCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.00200000020000
.............................................................................................................................................................................TTTTCGCCTG-TAAGGTTTTAAGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200000020000
.............................................................................................................................................GTGCGAAATCTGTTCCCCTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00201000100000
.............................................................................................................................................GTGCGAAATCTGTTCCCCTCGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00201000010000
...................................................................................................................................................................................................................................................................CGTGGTTTTGGATTGGCTTACAAA---------------------A........................................................................................................................................................................................................................................................................................................................................................................2512.00211000000000
............................................................................................................................................................................ATTTTCGCCTG-TAAGGTTTTAAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
.....................................................................................................................................................................................................TTTCGCAGATCAAATAT---AAGC-AAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
................................................................................................................................................................................................................................TCATTCACCCGCGTCCAAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
..............................................................................................................................................TGCGAAATCTGTTCCCCTCGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
...................................................................................................................................................AATCTGTTCCCCTCGTTGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
............................................................................................................................................................................................................................................................ATTGGTTCGTGGTTTTGGAT.........................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.................................................................................................................................................................................................................................CATTCACCCGCGTCCAAGTGAAGC................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
.........................................................................................................................................................................TCAATTTTCGCCTG-TAAGGTTTTAAGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
.............................................................................................................................................GTGCGAAATCTGTTCCCCTCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.............................................................................................................................................GTGCGAAATCTGTTCCCCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
......................................................................................................................................................................................................TTCGCAGATCAAATAT---AAGC-AATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000
.......................................................................................................................................................................................................TCGCAGATCAAATAT---AAGC-AAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
..............................................................................................................................................................................................................TCAAATAT---AAGC-AATCATTCACCCGCGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000
.................................................................................................................................................................................................................................CATTCACCCGCGTCCAAGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.............................................................................................................................................GTGCGAAATCTGTTCCCCTCGTTGGCGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000
........................................................................................................................................................................................................................................................CACAATTGGTTCGTGGTTTTGGATTGGCT....................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000
.........................................................................................................................................................................................................................................................................TTTGGATTGGCTTACAAA---------------------A........................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
...................................................................................................................................................................................................................TAT---AAGC-AATCATTCACCCGCGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
...........................................................................................................................................................................................................................................................AATTGGTTCGTGGTTTTGGATTGGCT....................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
.....................................................................................................................................................................................................TTTCGCAGATCAAATAT---AAGC-A..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
...............................................................................................................................................................................................................CAAATAT---AAGC-AATCATTCACCCGCGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
....................................................................................................................................................ATCTGTTCCCCTCGTTGGCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.............................................................................................................................................GTGCGAAATCTGTTCCCCTCGTTGGCGTTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.00100000010000
......................................................................................................................................................................................................TTCGCAGATCAAATAT---AAGC-AATCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
......................................................................................................................................................................................................TTCGCAGATCAAATAT---AAGC-AATCATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000
..............................................................................................................................................TGCGAAATCTGTTCCCCTCGTTGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
.......................ACAAGGAGTTCATCACGCTGTCAAGAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCGAGCTAGACGCCTTTCAGGTGCC......................2711.00100100000000
...................................................................................................................................................................................CCTG-TAAGGTTTTAAGATTTCGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
.............................................................................................................................................GTGCGAAATCTGTTCCCCTCGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
............................................................................................................................................................................................GTTTTAAGATTTCGCAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000
..........................................................................................................................................................................................................................................................CAATTGGTTCGTGGTTTTGGATTGGC.....................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
......................................................................................................................................................................................................TTCGCAGATCAAATAT---AAGC-AATCATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000
droEre2
TGACTTTGACTACGAGCCCTTTTACAAGGAGTTCATCACGCTGTCAAGAGGTAAGTCCTCGAACTACAAT-----TTTT---------------CAGTAAT----------------TTC--TTA--AGGTTT-T--CAATATGCGAAGTC-GTTCCCCTCATTGGCGTTCAATTTTCGCCTG-TAAGGTTTTAAGACTCCGCAGAACAATTAT---AAGC-AATCATTCACCCGCGTCCAAGTGAAGCTCAATTGGTTCGTGGTTTTGGATTTGCTTACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................................................................................................................................ATGCGAAGTC-GTTCCCCTCATTGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................251329.00329701307192470
.............................................................................................................................................ATGCGAAGTC-GTTCCCCTCATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................221115.001153311163160
.............................................................................................................................................ATGCGAAGTC-GTTCCCCTCATTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23139.0039120112320
.............................................................................................................................................ATGCGAAGTC-GTTCCCCTCATTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24131.003120200810
.............................................................................................................................................ATGCGAAGTC-GTTCCCCTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19110.00105100220
..............................................................................................................................................TGCGAAGTC-GTTCCCCTCATTGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24110.00105000410
.................................................................................................................................................................................................................................................................TTCGTGGTTTTGGATTTGCTTACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2419.0090010440
.............................................................................................................................................ATGCGAAGTC-GTTCCCCTCATTGGCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2618.0086000200
.................................................................................................................................................................................................................................................................TTCGTGGTTTTGGATTTGCTTAC.................................................................................................................................................................................................................................................................................................................................................................................................2318.0080000440
.................................................................................................................................................................................................................................................................TTCGTGGTTTTGGATTTGCTT...................................................................................................................................................................................................................................................................................................................................................................................................2116.0060000240
.............................................................................................................................................ATGCGAAGTC-GTTCCCCTCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2015.0052001110
.....................................................................................................................................................................................................................T---AAGC-AATCATTCACCCGCGTCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................2314.0040000040
.....................................................................................................................................................................................................CTCCGCAGAACAATTAT---AAGC-...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0043100000
.............................................................................................................................................ATGCGAAGTC-GTTCCCCTCATTGGCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.0040000400
...................................................................................................................................................AGTC-GTTCCCCTCATTGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.0041001110
.......................................................................................................................................................................GTTCAATTTTCGCCTG-TAAGGTTTTAAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2913.0031000200
.................................................................................................................................................................................................................................................................TTCGTGGTTTTGGATTTGCTTA..................................................................................................................................................................................................................................................................................................................................................................................................2213.0031000110
.............................................................................................................................................ATGCGAAGTC-GTTCCCCTCAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0032000100
...............................................................................................................................................GCGAAGTC-GTTCCCCTCATTGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0021000100
.........................................................................................................................................................................................................................................................TCAATTGGTTCGTGGTTTTGGATTTGCT....................................................................................................................................................................................................................................................................................................................................................................................................2812.0021100000
...........................................................................................................................................................................................................................................................AATTGGTTCGTGGTTTTGGA..........................................................................................................................................................................................................................................................................................................................................................................................................2012.0020002000
..............................................................................................................................................TGCGAAGTC-GTTCCCCTCATTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0022000000
.....................................................................................................................................................................................................CTCCGCAGAACAATTAT---AAGC-AATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0022000000
..........................................................................................................................................................................................................................................................CAATTGGTTCGTGGTTTTGGATTTGC.....................................................................................................................................................................................................................................................................................................................................................................................................2612.0020200000
............................................................................................................................................................................................................................................................ATTGGTTCGTGGTTTTGGA..........................................................................................................................................................................................................................................................................................................................................................................................................1912.0020001100
.......................................................................................................................................................................GTTCAATTTTCGCCTG-TAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0022000000
.................................................................................................................................................................................................................................................................TTCGTGGTTTTGGATTTGCT....................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000110
..............................................................................................................................................TGCGAAGTC-GTTCCCCTCATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0021000100
..............................................................................................................................................................................................................................AATCATTCACCCGCGTCCAAGTGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000
....................................................................................................................................................................................CTG-TAAGGTTTTAAGACTCCGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000
.....................................................................................................................................................................................................CTCCGCAGAACAATTAT---AAGC-AATCATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000000
......................................................................................................................................................................CGTTCAATTTTCGCCTG-TAAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
.............................................................................................................................................ATGCGAAGTC-GTTCCCCTCATTGGCGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
..............................................................................................................................................................................................................................AATCATTCACCCGCGTCCAAGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
...........................................................................................................................................................................................................................................................AATTGGTTCGTGGTTTTGGATT........................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001000
.............................................................................................................................................ATGCGAAGTC-GTTCCCCTCAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000
.....................................................................................................................................................................................................CTCCGCAGAACAATTAT---AAGC-AATCATTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010100000
......................................................................................................................................................................................................................................ACCCGCGTCCAAGTGAAGCTCAATTGGTT......................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000100
.............................................................................................................................................ATGCGAAGTC-GTTCCCCTCATTGGCGTTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0011000000
........................................................................................................................................................................................................................................................CTCAATTGGTTCGTGGTTTTGGATTTGCT....................................................................................................................................................................................................................................................................................................................................................................................................2911.0010100000
..................................................................................................................................................................................................................TTAT---AAGC-AATCATTCACCCGCGTCCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000100
................................................................................................................................................................................................................................TCATTCACCCGCGTCCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000
..............................................................................................................................................................................................TTTAAGACTCCGCAGAACAATTAT---AAGC-...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000000
.................................................................................................................................................GAAGTC-GTTCCCCTCATTGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
.................................................................................................................................................................................................................................................................TTCGTGGTTTTGGATTTGC.....................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
..................................................................................................................................................................................................................TTAT---AAGC-AATCATTCACCCGCGTCCA........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
...........................................................................................................................................................................................................................................................AATTGGTTCGTGGTTTTGGATTTG......................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010
...................................................................................................................................................................................................................TAT---AAGC-AATCATTCACCCGCGTCCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000100
.............................................................................................................................................ATGCGAAGTC-GTTCCCCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000100
.....................................................................................................................................................................................................................................................AAGCTCAATTGGTTCGTGGTTTTGGA..........................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
...................................................................................................................................................AGTC-GTTCCCCTCATTGGCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001000
............................................................................................................................................................................................................................................................ATTGGTTCGTGGTTTTGGAT.........................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
...........................................................................................................................................................................................................................................................AATTGGTTCGTGGTTTTGGATTTGCT....................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
..............................................................................................................................................................................TTTCGCCTG-TAAGGTTTTAAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
..........................................................................................................................................................................................AGGTTTTAAGACTCCGCAGAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
..............................................................................................................................................................................TTTCGCCTG-TAAGGTTTTAAGACTCCGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000010
.............................................................................................................................................ATGCGAAGTC-GTTCCCCTCATTGGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
.......................................................................................................................................................................GTTCAATTTTCGCCTG-TAAGGTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000
............................................................................................................................................TATGCGAAGTC-GTTCCCCTCATTGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
......................................................................................................................................................................................................TCCGCAGAACAATTAT---AAGC-AATCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
...............................................................................................................................................................................................................................................................GGTTCGTGGTTTTGGATTTGC.....................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
.........................................................................................................................................................................................................................................CGCGTCCAAGTGAAGCTCAATTGGTTC.....................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
.............................................................................................................................................................................................................................................................TTGGTTCGTGGTTTTGGA..........................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
.............................................................................................................................................................................................TTTTAAGACTCCGCAGAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
.....................................................................................................................................................................................................CTCCGCAGAACAATTAT---AAGC-AATCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
.....................................................................................................................................................................................................CTCCGCAGAACAATTAT---AAGC-AATCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
....................................................................................................................................................................................................ACTCCGCAGAACAATTAT---AAGC-...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000
......................................................................................................................................................................................................................................................AGCTCAATTGGTTCGTGGTTTTGGATC........................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000
...........................................................................................................................................................................................................................................................AATTGGTTCGTGGTTTTGGATTTGC.....................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
..................................................................................................................................................................................................................................................GTGAAGCTCAATTGGTTCGTG..................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
............................................................................................................................................................................ATTTTCGCCTG-TAAGGTTTTAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
.....................................................................................................................................................................................................CTCCGCAGAACAATTAT---AAGC-A..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010000
.......................................................................................................................................................................................................................................CCCGCGTCCAAGTGAAGCTCAATTG.........................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
..............................................................................................................................................TGCGAAGTC-GTTCCCCTCATTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
..........................................................................................................................................................................................................................................................CAATTGGTTCGTGGTTTTGGA..........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
...............................................................................................................................................................................................................................ATCATTCACCCGCGTCCAAGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000

Generated: 06/08/2015 at 04:51 PM