ID:

dpe_1914

 Coordinate:

scaffold_6:4212942-4213092 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-20.2 -20.2 -20.0

Flybase annnotation

exon [dper_GLEANR_12724:5]; CDS [Dper\GL12579-cds]; intron [Dper\GL12579-in]

Repeatable elements

NameClassFamilyStrand
(A)nSimple_repeatSimple_repeat+
T-richLow_complexityLow_complexity+

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TACAGCGACAACAGCCTCACATCCTGCATTGATGCACCCACTCACTGGACGTAAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAAAATAAAAAAGTATGAGATTTCGGCAGCTGCTAATTTCTTTAGTTTTTTTTTTTTGGTTTCTTTTATTTTTCCTTTTTACTGTATGTAGTTAATATTAATAAAAAACAAAACAAAAGTACATTATGTTTAAGGGTACAAAAAAACCGAAAACGAAGG
**************************************************...((((((((.............(((((.((((((((....(((((.((((((.((.((((((..(((....)))))))))..)).)))))).)))))..)))))))).)))))..))))))))..........................************************************************** 		Read size # Mismatch Hit Count Total Norm Total V057
head
 V042
embryo
 M042
female body
 M021
embryo
........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAA............................................................................................................................................................... 36 1 17 12.18 207 89 118 0 0
........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAACAA............................................................................................................................................................... 36 1 1 10.00 10 7 3 0 0
.........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAA.............................................................................................................................................................. 36 1 19 9.26 176 74 102 0 0
...........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAA............................................................................................................................................................ 36 1 17 7.71 131 56 75 0 0
..........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAA............................................................................................................................................................. 36 1 18 7.56 136 65 71 0 0
............................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAA........................................................................................................................................................... 36 1 17 6.76 115 55 60 0 0
........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAA............................................................................................................................................................... 36 0 1 6.00 6 3 3 0 0
.............................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAA.......................................................................................................................................................... 36 1 18 5.39 97 50 47 0 0
........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAA............................................................................................................................................................... 36 1 18 5.39 97 50 47 0 0
...........................................................AAAAAAAAAAAAAAAAAAAAAAAAAGAAAACAAAAA............................................................................................................................................................ 36 1 1 5.00 5 4 1 0 0
............................................................AAAAAAAAAAAAAAAAAAAAAAAAGAAAACAAAAAA........................................................................................................................................................... 36 1 1 5.00 5 4 1 0 0
..........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAA............................................................................................................................................................. 36 1 16 4.94 79 33 46 0 0
.........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAA.............................................................................................................................................................. 36 1 16 4.81 77 43 34 0 0
...........................................................AAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAA............................................................................................................................................................ 36 1 17 4.59 78 42 36 0 0
.........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAACAAA.............................................................................................................................................................. 36 1 1 4.00 4 2 2 0 0
............................................................AAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAA........................................................................................................................................................... 36 1 16 4.00 64 38 26 0 0
.............................................................AAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAA.......................................................................................................................................................... 36 1 16 3.69 59 30 29 0 0
........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAATAA............................................................................................................................................................... 36 1 1 3.00 3 2 1 0 0
..........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAA............................................................................................................................................................. 36 0 1 2.00 2 1 1 0 0
........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAGAA............................................................................................................................................................... 36 1 2 2.00 4 0 4 0 0
.....................................................AGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAA.................................................................................................................................................................. 36 1 1 2.00 2 1 1 0 0
................................................................AAAAAAAAAAAAAAAAAAAAGAAAAGAAAAAAAAAA....................................................................................................................................................... 36 1 1 2.00 2 1 1 0 0
.........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAATAAAAGAAA.............................................................................................................................................................. 36 1 1 2.00 2 1 1 0 0
..........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAGAAAACAAAA............................................................................................................................................................. 36 1 1 2.00 2 0 2 0 0
.............................................................AAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAAAA.......................................................................................................................................................... 36 0 1 2.00 2 0 2 0 0
....................................................................AAAAAAAAAAAAAAAAGAAAAGAAAAAAAAAAAAAA................................................................................................................................................... 36 1 1 2.00 2 2 0 0 0
.........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAGA.............................................................................................................................................................. 36 1 1 2.00 2 1 1 0 0
............................................................AAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAAA........................................................................................................................................................... 36 0 1 2.00 2 1 1 0 0
..........................................................AAAAAAAAAAAAAAAAAAAA............................................................................................................................................................................. 20 0 20 1.65 33 0 0 33 0
.............................................................AAAAAAAAAAAAAAAAAAAAA......................................................................................................................................................................... 21 0 20 1.60 32 0 0 32 0
.........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAGAAA.............................................................................................................................................................. 36 1 2 1.50 3 2 1 0 0
.......................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGA................................................................................................................................................................ 36 1 2 1.50 3 2 1 0 0
............................................................AAAAAAAAAAAAAAAAAAAAAAAATAAAAGAAAAAA........................................................................................................................................................... 36 1 2 1.50 3 2 1 0 0
............................................................AAAAAAAAAAAAAAAAAAAAAAAACAAAAGAAAAAA........................................................................................................................................................... 36 1 3 1.33 4 3 1 0 0
...........................................................AAAAAAAAAAAAAAAAAAAAAAAAACAAAAGAAAAA............................................................................................................................................................ 36 1 3 1.33 4 1 3 0 0
...............................................................AAAAAAAAGCAAAAAAAAAAAGAAAAGAAAAAAAAA........................................................................................................................................................ 36 3 1 1.00 1 1 0 0 0
................................................................AAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAATAA....................................................................................................................................................... 36 1 1 1.00 1 1 0 0 0
...........................................................AAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAGA............................................................................................................................................................ 36 1 1 1.00 1 0 1 0 0
............................................................AAAAAAAAAAAAAAAAAAAAAAAAGAAAATAAAATA........................................................................................................................................................... 36 2 1 1.00 1 1 0 0 0
.............................................................AAAAAAAAAAAAAAAAAAAAAAACAAAAGACAAAAA.......................................................................................................................................................... 36 2 2 1.00 2 2 0 0 0
............................................................AAAAAAAAAAAACAAAAAAAAAAAGAAAAGAAAGAA........................................................................................................................................................... 36 2 1 1.00 1 0 1 0 0
.............................................................AAAAAAAAAAAAAAACAAAAAAAGAAAACAAAAAAA.......................................................................................................................................................... 36 2 1 1.00 1 1 0 0 0
............................................................AAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAACAA........................................................................................................................................................... 36 1 1 1.00 1 0 1 0 0
.........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGATA.............................................................................................................................................................. 36 1 1 1.00 1 0 1 0 0
............................................................AAATAAAAAAAAAAAAAAATAAAAGATAAGAAAAAA........................................................................................................................................................... 36 3 1 1.00 1 0 1 0 0
...............................................................AAAAAAAAAAAAAAAAAAAAAGAACACAAAACAATA........................................................................................................................................................ 36 3 1 1.00 1 0 1 0 0
.................................................................AAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAATAAA...................................................................................................................................................... 36 1 2 1.00 2 1 1 0 0
........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAAGAA............................................................................................................................................................... 36 1 1 1.00 1 1 0 0 0
...........................................................AAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGTAACA............................................................................................................................................................ 36 2 1 1.00 1 0 1 0 0
..........................................................AAAAAAAAAAAAACAAAAAAAAAAAAGACAAGAAAA............................................................................................................................................................. 36 2 1 1.00 1 0 1 0 0
............................................................AAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAGAAG........................................................................................................................................................... 36 2 1 1.00 1 1 0 0 0
...................................................................AAAAAAAAAAAAAAAAAGAAAAAAAAAAAATAAAAA.................................................................................................................................................... 36 1 1 1.00 1 1 0 0 0
............................................................AAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAACA........................................................................................................................................................... 36 1 1 1.00 1 1 0 0 0
............................................................AAAAAAAAAAAAAAAAAAACAAAAGAAAAGAAAAAA........................................................................................................................................................... 36 1 1 1.00 1 1 0 0 0
........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAGACAACAA............................................................................................................................................................... 36 2 2 1.00 2 1 1 0 0
..............................................................AGAAAAAAAAAAAAAAAAAAAAGAAAAGAAACAAAA......................................................................................................................................................... 36 3 1 1.00 1 1 0 0 0
........................................................AAAAAAAAAAAAAAAAAAAAGAAACAAAGAACAGAA............................................................................................................................................................... 36 3 1 1.00 1 1 0 0 0
.........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGACA.............................................................................................................................................................. 36 1 1 1.00 1 0 1 0 0
...................................................................AAAAAAAAAAAAAAAAAGAAAAGAAAAAAAAAAAAA.................................................................................................................................................... 36 1 1 1.00 1 0 1 0 0
.............................................................AAAAAAAAAAAAAAAAAAAAAAAGAAGAGACAAAC........................................................................................................................................................... 35 3 1 1.00 1 0 1 0 0
.........................................................AAAAAAAAAAGAACAAAAAAAAAAAAAGAAAAGAAA.............................................................................................................................................................. 36 2 1 1.00 1 0 1 0 0
..........................................................AAAAAAAAAAAAAAAAAAAGAAGAAAGAAGAGAAAA............................................................................................................................................................. 36 3 1 1.00 1 1 0 0 0
...........................................................AAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAACAA............................................................................................................................................................ 36 1 1 1.00 1 1 0 0 0
...........................................................AAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAT............................................................................................................................................................ 36 1 1 1.00 1 1 0 0 0
..........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGACAA............................................................................................................................................................. 36 1 1 1.00 1 0 1 0 0
...........................................................AAAAAAAAAAAAAAAAAAAAAAAAAGACAACAAAAA............................................................................................................................................................ 36 2 1 1.00 1 1 0 0 0
...............................................................AAAAAGAAAAAAAAAAAAAAAAAAAAGAAAAAAATA........................................................................................................................................................ 36 2 1 1.00 1 1 0 0 0
..........................................................AAAAAAAAAAAAAAAAAAAAAAAAAATAAAAGAAA.............................................................................................................................................................. 35 1 1 1.00 1 0 1 0 0
.................................................................AAAAAAAAAAAAAAAAAAAGACAAGAAAAAAAAAAA...................................................................................................................................................... 36 2 1 1.00 1 0 1 0 0
...........................................................AGAAAAAAAAACAAAAAAAAAGAAAGAAAAGAAAAA............................................................................................................................................................ 36 3 1 1.00 1 1 0 0 0
...........................................................AAAAAAAAAAAAAAAAAAAACAAAAGAATAGAAAAA............................................................................................................................................................ 36 2 1 1.00 1 0 1 0 0
...............................................................AAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAAACAA........................................................................................................................................................ 36 2 1 1.00 1 1 0 0 0
...............................................................AAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAAAAC......................................................................................................................................................... 35 1 1 1.00 1 0 1 0 0
........................................................AAAAAAAAAAAAAAAAAATAAAAAAAGAGAAAAGAA............................................................................................................................................................... 36 2 1 1.00 1 1 0 0 0
................................................................AAAAAAAAAAAAAAAAAAAACAAAAGAAAAAAACAA....................................................................................................................................................... 36 2 1 1.00 1 0 1 0 0
.............................................................AAAAAAAAAAAAAAAAAAAGAAAGAAAAGAAAAAAA.......................................................................................................................................................... 36 1 1 1.00 1 0 1 0 0
.........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAGAACAGAAA.............................................................................................................................................................. 36 1 1 1.00 1 1 0 0 0
................................................................AAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAATAA....................................................................................................................................................... 36 1 1 1.00 1 0 1 0 0
................CCACACCCTGCTTTGATGCACC..................................................................................................................................................................................................................... 22 3 1 1.00 1 1 0 0 0
.............................................................AAAAAAAAAAAAAAAAAAAAAAACAAAAGAAAAAAA.......................................................................................................................................................... 36 1 1 1.00 1 1 0 0 0
.............................................................AAAAAAAAAAAAAAAAAAAAAAAGCCAAGAAAAAAA.......................................................................................................................................................... 36 2 1 1.00 1 0 1 0 0
........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAGAATAGA................................................................................................................................................................ 35 1 1 1.00 1 0 1 0 0
..............................................................AAAAAAAAAAAAAAAAAAAAATCAAAAGAAAAAAA.......................................................................................................................................................... 35 2 1 1.00 1 1 0 0 0
................................................................AAAAAAAAAAAAAAAAAAAAGAAGAGAAAAACATAA....................................................................................................................................................... 36 2 1 1.00 1 0 1 0 0
.............................................................AAAAAAAAAAAAAAAAAAAAAAAGAAAACAAAAAAA.......................................................................................................................................................... 36 1 1 1.00 1 1 0 0 0
.............................................................AAAGAAAAAAAAAAAAAAGAAAAGAAAAGAAAAAAA.......................................................................................................................................................... 36 2 1 1.00 1 0 1 0 0
................................................TCGTATGTAAAAAAAAAAAAAAAAAAAAAAAAAAAA....................................................................................................................................................................... 36 2 1 1.00 1 0 1 0 0
........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAGAGAAAAGTA............................................................................................................................................................... 36 2 1 1.00 1 1 0 0 0
.............................................................AAAAAAAAAAAAAAAAAAAAAAATAAAAGAAAAAAA.......................................................................................................................................................... 36 1 2 1.00 2 1 1 0 0
...............................................................AAAAAAAAAAAAAAAAAACAAGAAAAGAAAAAAAAA........................................................................................................................................................ 36 2 1 1.00 1 0 1 0 0
.....................................................................AAAAAAAAAAAAAAAGAAAAATAAAGAATAAAAAAG.................................................................................................................................................. 36 3 1 1.00 1 1 0 0 0
............................................................AAAAAAAGAAAAAAAAAAAAAAAAGAAAACAAAAAA........................................................................................................................................................... 36 2 1 1.00 1 0 1 0 0
............................................................AAAAAAAAAAAAAAAAAAAAAAAAGATCAGAAAGAA........................................................................................................................................................... 36 3 1 1.00 1 0 1 0 0
........................................................AAAAAAAAAAAAAAACAAAACAAAAAGAGAAAAGAA............................................................................................................................................................... 36 3 1 1.00 1 0 1 0 0
...............................................................AAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAAAAAA........................................................................................................................................................ 36 1 1 1.00 1 0 1 0 0
............................................................AAAAAAAAAAAAAAAAAAAAAAAAGAAAATAAAAGA........................................................................................................................................................... 36 2 1 1.00 1 0 1 0 0
...........................................................AAAAAAAAAAAAAAAACAAAAAAAAGAAAACAAAAA............................................................................................................................................................ 36 2 1 1.00 1 1 0 0 0
..............................................................AAAAAAAAAAAAAAAAAAGAAAGAAAACCAAAAAAT......................................................................................................................................................... 36 3 1 1.00 1 1 0 0 0
................................................................AAAAAAAAAACAAAAAAAAAGAAAAGAAAAAAAAAA....................................................................................................................................................... 36 2 1 1.00 1 0 1 0 0
............................................................AAAAAAAAAAAAAAAAAAAAAAAAGAAGAGAAAAAG........................................................................................................................................................... 36 2 1 1.00 1 0 1 0 0
...............................................................AAAAAAAAAAAAAAAAACAAAGAAAAGAAAAAAAAA........................................................................................................................................................ 36 2 1 1.00 1 0 1 0 0
...................................................TAAGTAAAAACAAAAAAAAAAAAAAAAAAAAACAAA.................................................................................................................................................................... 36 3 1 1.00 1 0 1 0 0
............................................................AAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAGAAAA........................................................................................................................................................... 36 1 1 1.00 1 1 0 0 0
........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAGACAAGAA............................................................................................................................................................... 36 1 1 1.00 1 0 1 0 0
........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAGACAAAAGAA............................................................................................................................................................... 36 2 2 1.00 2 2 0 0 0
.........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAA.............................................................................................................................................................. 36 0 1 1.00 1 0 1 0 0
..........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAGATTAGAAAA............................................................................................................................................................. 36 2 1 1.00 1 0 1 0 0
.............................................TGGAAGTAAGAAAAAAAAGAAAAAAAAAAAAAAAAA.......................................................................................................................................................................... 36 3 1 1.00 1 1 0 0 0
...................................................................AAAAAAAAAAAAAAAAACAAAATAAAAAAATAAAAA.................................................................................................................................................... 36 2 1 1.00 1 1 0 0 0
...................................................................AAAAAAAAAAAAAAAAAGAAAAGAAAAAAATAACAA.................................................................................................................................................... 36 1 1 1.00 1 0 1 0 0
..................................................................AAAAAAAAAAAAAAAAAAAAAAAGAAAAAAATAAAA..................................................................................................................................................... 36 1 1 1.00 1 1 0 0 0
.........................................................AAAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAGAAA.............................................................................................................................................................. 36 1 1 1.00 1 1 0 0 0
...........................................................AAAAAAAAAAAAGAAAAAAAAATAAGGAAAGAAAAA............................................................................................................................................................ 36 3 1 1.00 1 1 0 0 0
........................................................AAAAAAAAAAAAAAAAAAAAAAAAA.......................................................................................................................................................................... 25 0 20 0.85 17 0 0 0 17
............................................................AAAAAAAAAAAAAAAAAAAAAAAACAAAACAAAAAA........................................................................................................................................................... 36 2 20 0.75 15 5 10 0 0
..........................................................AAAAAAAAAAAAAAAAAAAAAAAAAACAAAAGAAAA............................................................................................................................................................. 36 1 3 0.67 2 1 1 0 0
.........................................................AAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAACAAA.............................................................................................................................................................. 36 2 3 0.67 2 2 0 0 0
............................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAGACAAAA........................................................................................................................................................... 36 2 20 0.65 13 7 6 0 0
.......................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAGA................................................................................................................................................................ 36 2 20 0.55 11 5 6 0 0
.............................................................AAAAAAAAAAAAAAAAAAAAAAACAAAACAAAAAAA.......................................................................................................................................................... 36 2 19 0.53 10 6 4 0 0
............................................................AAAAAAAAAAAAAAAAAAAAAAAAGAAAAGACAAC............................................................................................................................................................ 35 2 2 0.50 1 1 0 0 0
.............................................................AAAAAAAAAAAAAAAAAAAAAAAGAAGAGCAAAAA........................................................................................................................................................... 35 2 2 0.50 1 0 1 0 0
..............................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAT......................................................................................................................................................... 36 1 2 0.50 1 1 0 0 0
..........................................................AAAAAAAAAAAAAAAAAAAAAAAAAGGAAAACAAAA............................................................................................................................................................. 36 2 2 0.50 1 0 1 0 0
...........................................................AAAAAAAAAAAAGAAAAAAAAAAAAGAAAAGCAAAA............................................................................................................................................................ 36 2 2 0.50 1 1 0 0 0
......................................................................AAAAAAAAAAAAAAGAAAAGAAGAAAAAAAAAAAGA................................................................................................................................................. 36 3 2 0.50 1 1 0 0 0
.........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAATAA............................................................................................................................................................... 35 1 2 0.50 1 1 0 0 0
..................................................................AAAAAAAAAAAAAAATAAGAAAAGAAAAAAAAAAAA..................................................................................................................................................... 36 2 2 0.50 1 1 0 0 0
..........................................................AAAAAAAAAAAAAAAAAAAAAAAACATAAAAGAGAA............................................................................................................................................................. 36 3 2 0.50 1 1 0 0 0
.........................................................AAAAAAAAAAAAAAACAAAAAAAAAAAGAAAACAAA.............................................................................................................................................................. 36 2 2 0.50 1 1 0 0 0
............................................................AAAAAAAAAAAAAAAAAAAAAAAAGAAATGACAGAA........................................................................................................................................................... 36 3 2 0.50 1 0 1 0 0
..............................................................ATAAAAAAAAAAAAAAAAAAAAGAAAACAAAAAAA.......................................................................................................................................................... 35 2 2 0.50 1 1 0 0 0
........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAACGAA............................................................................................................................................................... 36 1 2 0.50 1 0 1 0 0
...................................................................AAAAAAAAAAAAAAAAAGATAAGAAAAAAAAAAAAA.................................................................................................................................................... 36 2 2 0.50 1 0 1 0 0
...........................................................AAAAAAAAAAAAAAAAAAAAAAAAAGTAAAGAACAA............................................................................................................................................................ 36 2 2 0.50 1 0 1 0 0
.................................................................AAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAATAAA...................................................................................................................................................... 36 1 2 0.50 1 0 1 0 0
........................................................AAAAAAAACAAAAAAAAAAATAAAAAAAGAAAATAA............................................................................................................................................................... 36 3 2 0.50 1 1 0 0 0
........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAACAGAAGAA............................................................................................................................................................... 36 2 4 0.50 2 1 1 0 0
........................................................AAAAAAAAAAAAAAAAAAACAAAAAAAACAAAAGAA............................................................................................................................................................... 36 2 2 0.50 1 0 1 0 0
.........................................................AAAAAAAAAAAAAAAAAAAAAAAAACACAAAAGAAA.............................................................................................................................................................. 36 2 2 0.50 1 1 0 0 0
........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAACGAATAGA................................................................................................................................................................ 35 2 2 0.50 1 0 1 0 0
........................................................AAAAAAAAAAAAAAAAAAAAAACAAACAGAAAACAA............................................................................................................................................................... 36 3 2 0.50 1 0 1 0 0
..........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAGGAAACAAAA............................................................................................................................................................. 36 2 2 0.50 1 0 1 0 0
..........................................................AAAAAAAAAAAAAAAAAAAAAAGAAAGAAAATAAAA............................................................................................................................................................. 36 2 2 0.50 1 1 0 0 0
.............................................................AAAAAAAAAAAAAAAATAAAAAAGAAAATAAAAAAA.......................................................................................................................................................... 36 2 2 0.50 1 0 1 0 0
........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAACACAAGAA............................................................................................................................................................... 36 2 8 0.50 4 2 2 0 0
...........................................................AAAAAAAAAAAAAAAAAAAAAAAAAGCAACGAAACA............................................................................................................................................................ 36 3 2 0.50 1 0 1 0 0
.............................................................AAAAAAAAAAAATAAACAAAAAAGAAAAGAAAGAAA.......................................................................................................................................................... 36 3 2 0.50 1 1 0 0 0
..........................................................AAAAAAAAGAAAAAAAAAAAAAAAAAGAAAACAAAA............................................................................................................................................................. 36 2 2 0.50 1 1 0 0 0
.........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAGACAACAAA.............................................................................................................................................................. 36 2 2 0.50 1 0 1 0 0
............................................................AAAAAAAAAAAAAAAATAAAAAAAGAAAACAAAAAA........................................................................................................................................................... 36 2 2 0.50 1 0 1 0 0
........................................................AAAAAAAAAAAAAAAAAAAAAGAAAAAAGAAAACAA............................................................................................................................................................... 36 2 2 0.50 1 1 0 0 0
.........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAGACAACAA............................................................................................................................................................... 35 2 2 0.50 1 0 1 0 0
.........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAGCAAACAAA.............................................................................................................................................................. 36 2 2 0.50 1 0 1 0 0
....................................................AAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAA................................................................................................................................................................... 36 2 2 0.50 1 1 0 0 0
...........................................................AAAAAAAATAAAAAAAAAAAAAAAAGAAAACAAAAA............................................................................................................................................................ 36 2 2 0.50 1 1 0 0 0
..........................................................AAAAAAAAAAAAAAAAAAAAACAAAAGAAAATAAAA............................................................................................................................................................. 36 2 2 0.50 1 0 1 0 0
........................................................AAAAAAAAAAAAAAAAAAAAGAAAAAAACAAAAGAA............................................................................................................................................................... 36 2 2 0.50 1 0 1 0 0
...........................................................AAAAAAAAAAAAAAAAAAAAAAGAAGAAGAGAGAAA............................................................................................................................................................ 36 3 2 0.50 1 1 0 0 0
............................................................AAAAAAAAAGATAAAAAAAAAAAAGAAAACAAAAAA........................................................................................................................................................... 36 3 2 0.50 1 1 0 0 0
............................................................AAAAAAAAAAAAAAAAAAAAAAAAGAAAACCAAAAA........................................................................................................................................................... 36 2 2 0.50 1 1 0 0 0
.........................................................AAAAAAAAAAAAAACAAAAAAAAAAAAGAAAAGCAA.............................................................................................................................................................. 36 2 2 0.50 1 1 0 0 0
.........................................................AAAAAAAAAAAAAAAAAAGAAAAAAAAGAAAACAAA.............................................................................................................................................................. 36 2 2 0.50 1 1 0 0 0
.........................................................AAAAAAAAAAAAAAAAAAAAAAGAAAACAAAAGAAA.............................................................................................................................................................. 36 2 2 0.50 1 1 0 0 0
...................................................................AAAAAAAAAAAAAAAAAGAAAAGAAAAAAAAAAATA.................................................................................................................................................... 36 2 2 0.50 1 1 0 0 0
.............................................................AAAAAAAAAAAAAAAAAAAAAAAGAAAACAAACAAA.......................................................................................................................................................... 36 2 2 0.50 1 0 1 0 0
.........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGCAA.............................................................................................................................................................. 36 1 2 0.50 1 0 1 0 0
........................................................AAAAAAAAAAAAAAAAAAAAAAAATAAACAAAAGAA............................................................................................................................................................... 36 2 2 0.50 1 1 0 0 0
...........................................................AAAAAAAAAACAAAACAAAAAAAAAGATAAGAAAAA............................................................................................................................................................ 36 3 2 0.50 1 1 0 0 0
............................................................AAAAAAAAAAAAAAAATAAAAAAAGAGAAGAATAAA........................................................................................................................................................... 36 3 2 0.50 1 0 1 0 0
.........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAGAAA.............................................................................................................................................................. 36 2 20 0.50 10 0 10 0 0
..........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAACAGAAAA............................................................................................................................................................. 36 2 20 0.50 10 2 8 0 0
............................................................AAAAAAAAAAAAAAAAAAAAAAAAGACAACAAAAAA........................................................................................................................................................... 36 2 2 0.50 1 1 0 0 0
........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGA................................................................................................................................................................ 35 1 20 0.50 10 3 7 0 0
...........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGACAAA............................................................................................................................................................ 36 2 20 0.45 9 5 4 0 0
........................................................AAAAAAAAAAAAAAAAAAAAAAAACAAAGAAAACAA............................................................................................................................................................... 36 2 5 0.40 2 2 0 0 0
..........................................................AAAAAAAAAAAAAAAAAAAAAAAAAACACAAGAAAA............................................................................................................................................................. 36 2 5 0.40 2 1 1 0 0
...........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAACAA............................................................................................................................................................ 36 2 20 0.40 8 0 8 0 0
.........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAGAAACAAAA.............................................................................................................................................................. 36 2 20 0.35 7 3 4 0 0
.........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGA.............................................................................................................................................................. 36 2 20 0.35 7 0 7 0 0
...............................................................AAAAAAAAAAAAAAAACAAAAGAAAAGAGAAAAAAA........................................................................................................................................................ 36 3 3 0.33 1 0 1 0 0
..........................................................AAAAAAAAAAAAAAGAAAAAAAAAAATAAAAGAAGA............................................................................................................................................................. 36 3 3 0.33 1 0 1 0 0
................................................................AAAAAAAAAAAAAAAAAAAAGAAAAGAAAACAAAAA....................................................................................................................................................... 36 2 3 0.33 1 1 0 0 0
....................................................AAGTAGAAAAAGAAAAAAAAAAAAAAAAAAAAAAAA................................................................................................................................................................... 36 3 3 0.33 1 1 0 0 0
...........................................................AAAAAAAAAAAACAAAAAAAAAAAACAAAAGAAGAA............................................................................................................................................................ 36 3 3 0.33 1 1 0 0 0
....................................................................AAAAAAAAAAAAAAAAGAAAAAAAAAAAATAAAAAT................................................................................................................................................... 36 2 3 0.33 1 1 0 0 0
.........................................................AAAAAAAAAAAAAAAAGAAAAAAAAAAGACAACAAA.............................................................................................................................................................. 36 3 3 0.33 1 1 0 0 0
.........................................................AAAAAAAAAAAAACAAAAAAAAAAAAACAAAAGAAA.............................................................................................................................................................. 36 2 3 0.33 1 1 0 0 0
.................................................................AAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAATAGA...................................................................................................................................................... 36 2 3 0.33 1 0 1 0 0
........................................................AAAAAAAAAAAAAAGAAAAAAAAAAAAAGAATATAA............................................................................................................................................................... 36 3 3 0.33 1 1 0 0 0
.........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAGAGACGACA.............................................................................................................................................................. 36 3 3 0.33 1 0 1 0 0
.................................................................AAACAAAAAAAAAATAAAAGAAAAGAAAAAAAAAAA...................................................................................................................................................... 36 3 3 0.33 1 1 0 0 0
..........................................................AAAAAAAAAAAAAAACAAACAAAAAAGAAAATAAAA............................................................................................................................................................. 36 3 3 0.33 1 0 1 0 0
.......................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAGA................................................................................................................................................................ 36 2 3 0.33 1 1 0 0 0
...........................................................AAGAAAAAAAAAAAAATAAAAAAAAGAAAACAAAAA............................................................................................................................................................ 36 3 3 0.33 1 0 1 0 0
..........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAGAGACGAAAG............................................................................................................................................................. 36 3 3 0.33 1 0 1 0 0
..........................................................AAAAAAAAAAAAAAAAAAAAAACAAAGAAAACAAAA............................................................................................................................................................. 36 2 3 0.33 1 1 0 0 0
...........................................................AAAAAAAAAAAAAAAAAAAAGAAAAGAAAACAAAAA............................................................................................................................................................ 36 2 3 0.33 1 1 0 0 0
.....................................................AGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA.................................................................................................................................................................. 36 1 3 0.33 1 0 1 0 0
.........................................................AAAAAAAAAAAAAAAAACAAAAAAAAAGAAAA.................................................................................................................................................................. 32 1 3 0.33 1 0 1 0 0
........................................................AAAAAAAAAAAAAAAAAAAAAAAAAACAGAAAATAA............................................................................................................................................................... 36 2 3 0.33 1 0 1 0 0
.............................................................AAAAAAAAAAAAAAAAACAAAAACAAAAGAAAAAAA.......................................................................................................................................................... 36 2 3 0.33 1 1 0 0 0
.......................................................AAAAAAAAAAAAAAGAAAAAAAAAAAAAAGAAAAGA................................................................................................................................................................ 36 2 3 0.33 1 0 1 0 0
.............................................................AAAAAAAAAAAAGAAACAAAAAAGAAAACAAAAAAA.......................................................................................................................................................... 36 3 3 0.33 1 0 1 0 0
..................................................................AAAAAAAAAAAAAAAAAAGAAGAGAAAAACACAAAA..................................................................................................................................................... 36 3 3 0.33 1 0 1 0 0
...........................................................AAAAAAAAAAAAAAAAAAAAAAACAGAAAACAAAAA............................................................................................................................................................ 36 2 3 0.33 1 1 0 0 0
..........................................................AAAAAAAAAAAAAAAAAAAAAAAGAAGAAAAGAGC.............................................................................................................................................................. 35 3 3 0.33 1 0 1 0 0
...................................................................AAAAAAAAAAAAAAAAAAAAAAGAAAAAACTAAAAA.................................................................................................................................................... 36 2 3 0.33 1 0 1 0 0
.............................................................AAAAAAAAAAAAAAAAAGAAAGAGGAAAGAAAAAAA.......................................................................................................................................................... 36 3 3 0.33 1 1 0 0 0
........................................................AAAAAAAATAAAAAAAAAAAAAAAAAAAGACAACAA............................................................................................................................................................... 36 3 3 0.33 1 1 0 0 0
.........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAGAACAGACA.............................................................................................................................................................. 36 2 3 0.33 1 0 1 0 0
..............................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAGAACAAAAT......................................................................................................................................................... 36 2 3 0.33 1 0 1 0 0
.......................................................AAAAAAAGAAAAAAAAAAAAAAAAAAAAAGAAAAGA................................................................................................................................................................ 36 2 3 0.33 1 1 0 0 0
................TCACAGCCTGCTTTGATGCACT..................................................................................................................................................................................................................... 22 3 3 0.33 1 1 0 0 0
...........................................................AAAAAAAAAAAAAAAAAAACAAAAATAAAAGAAAAA............................................................................................................................................................ 36 2 3 0.33 1 1 0 0 0
.........................................................AAAAAAAAAAAAAAAAAAAACAAAAAAGAAAACAAA.............................................................................................................................................................. 36 2 3 0.33 1 1 0 0 0
.............................................................AAAAAAAAAAAAAAAAAAAAAAAGAAAAGTAACCAA.......................................................................................................................................................... 36 3 3 0.33 1 0 1 0 0
..........................................................AAAAAAAAAAAAAAAAAAAAGAAAAAGAAGACAAAA............................................................................................................................................................. 36 3 3 0.33 1 0 1 0 0
.........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAGAAT.............................................................................................................................................................. 36 2 3 0.33 1 0 1 0 0
.................................................................AAAAAAAAAAAAAAAAAAACAAAACAAAAAAATAAA...................................................................................................................................................... 36 2 3 0.33 1 0 1 0 0
.........................................................AAAAAAAAAAAAAAAAAAAAAAACAAAGAAAACAAA.............................................................................................................................................................. 36 2 3 0.33 1 1 0 0 0
.......................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAACAGA................................................................................................................................................................ 36 2 6 0.33 2 1 1 0 0
....................................................AAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA................................................................................................................................................................... 36 1 3 0.33 1 0 1 0 0
.......................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAAGA................................................................................................................................................................ 36 2 3 0.33 1 1 0 0 0
.............................................................AAAAAAAAAAAAAAAAAAACAAAGAACACAAAAAAA.......................................................................................................................................................... 36 3 3 0.33 1 1 0 0 0
.........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAATACAAGAAA.............................................................................................................................................................. 36 2 3 0.33 1 1 0 0 0
...........................................................AAAAAAAAAAAAAAAAAAAAAATAACAAAAGAAAAA............................................................................................................................................................ 36 2 3 0.33 1 1 0 0 0
.........................................................AAAAAAAAAAAAAAATAAAAAAAAATAGAAAACAAA.............................................................................................................................................................. 36 3 3 0.33 1 1 0 0 0
........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAGAATACAA............................................................................................................................................................... 36 2 3 0.33 1 1 0 0 0
............................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAAAA........................................................................................................................................................... 36 2 20 0.30 6 3 3 0 0
...........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAACAGAAAAA............................................................................................................................................................ 36 2 20 0.30 6 2 4 0 0
........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAGACAAAAA............................................................................................................................................................... 36 2 20 0.30 6 4 2 0 0
..........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAGAA............................................................................................................................................................. 36 2 20 0.30 6 2 4 0 0
.............................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAGACAAAAA.......................................................................................................................................................... 36 2 20 0.30 6 4 2 0 0
..........................................................AAAAAAAAAAAAAAAAAAAAAAAAA........................................................................................................................................................................ 25 0 20 0.30 6 0 0 6 0
........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAGAA............................................................................................................................................................... 36 2 20 0.30 6 2 4 0 0
.........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAGAACAAAAA.............................................................................................................................................................. 36 2 20 0.30 6 4 2 0 0
..................................................................AAAAAAAAAAAAAAAAAAAAAAAGACACAAATAAAA..................................................................................................................................................... 36 3 4 0.25 1 0 1 0 0
..........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAACAA............................................................................................................................................................. 36 2 20 0.25 5 1 4 0 0
...........................................................AAAAAAAAAAAAAAAAAAAAAAAAAGAACACAAAAA............................................................................................................................................................ 36 2 4 0.25 1 0 1 0 0
............................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAATA........................................................................................................................................................... 36 2 20 0.25 5 2 3 0 0
..............................................................AAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAAACA......................................................................................................................................................... 36 2 4 0.25 1 0 1 0 0
..............................................................AAAAAAAAAAAAAAAAGAAAAAGAAAAGAAAAAATA......................................................................................................................................................... 36 3 4 0.25 1 1 0 0 0
..................................................................AAAAAAAAAAAAAAGAAAAAAAAGAAGAAAATAAAA..................................................................................................................................................... 36 3 4 0.25 1 1 0 0 0
................................................................AAAAAAAAAAAAAAAAAAAAGAAAACGAAAAAACA........................................................................................................................................................ 35 3 4 0.25 1 1 0 0 0
...........................................................AAAAAAAAAAAAAAAAAAAAAAAGACAAAAGAAAGA............................................................................................................................................................ 36 3 4 0.25 1 1 0 0 0
............................................................AAAAAAAAAAAAAAAAAAAAAACACAAAAGAAAAAA........................................................................................................................................................... 36 2 4 0.25 1 1 0 0 0
.........................................................AAAAAAAAAAAAAAAAAAAAAAAACAAGAAAACAAT.............................................................................................................................................................. 36 3 4 0.25 1 0 1 0 0
..........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAGAAAACAGAA............................................................................................................................................................. 36 2 4 0.25 1 1 0 0 0
..........................................................AAAAAAAAAAAAAAGAAAAAAAAGAAGAAAATAAAA............................................................................................................................................................. 36 3 4 0.25 1 1 0 0 0
..........................................................AAAAAAAAAAAAAAAAAAAAAAAAAACAAAAGACAA............................................................................................................................................................. 36 2 4 0.25 1 1 0 0 0
........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAATAACAGAA............................................................................................................................................................... 36 2 4 0.25 1 1 0 0 0
.............................................................AAAAAAAAAAAAAAAAAAAAAAAGAAAACACAAAAA.......................................................................................................................................................... 36 2 4 0.25 1 1 0 0 0
........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAA....................................................................................................................................................................... 28 0 20 0.25 5 0 0 5 0
...................................................TAAACAAAAAAAAAAAAAAAAAAAAACAAAAAAGAA.................................................................................................................................................................... 36 3 4 0.25 1 0 1 0 0
.......................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAGA................................................................................................................................................................ 36 2 4 0.25 1 1 0 0 0
..........................................................AGAAAAAAAAAAAAAAAAAACAAAAAGAAAACAAAA............................................................................................................................................................. 36 3 4 0.25 1 1 0 0 0
.................................................................AAAAAAAAAAAAAAAAAAAGAAAAAAAAAACATAAA...................................................................................................................................................... 36 2 4 0.25 1 1 0 0 0
.............................................................AAAAAAAAAAAAAAAAAAAAAAAGAAGACAAAAACA.......................................................................................................................................................... 36 3 8 0.25 2 2 0 0 0
..............................................................AAAAAAAAAAAAAAAAAAAAAAAACAAGAAAACAAT......................................................................................................................................................... 36 3 4 0.25 1 0 1 0 0
...............................................GAGGTAATAAAAAAAAAAAAAAAAAAAAAAAAAAAA........................................................................................................................................................................ 36 3 4 0.25 1 0 1 0 0
...........................................................AAAAAAAAAAAAAAAAAAAAAACAAGAGAAGAAGAA............................................................................................................................................................ 36 3 4 0.25 1 1 0 0 0
.............................................................AAAAAAAAAAAAAAAAAAAAAAACAAAAGAAAAACA.......................................................................................................................................................... 36 2 4 0.25 1 0 1 0 0
........................................................AAAAAAAAAAAAAAAAAAATAAAAAAAATGAAAGAA............................................................................................................................................................... 36 3 4 0.25 1 0 1 0 0
...........................................................AAAAAAAAAAAAAATAAACAAAAAAGAAAACAAAAA............................................................................................................................................................ 36 3 4 0.25 1 1 0 0 0
........................................................AAAAAAAAAAAAAAAAAAAATATAAAAACAAAAGAA............................................................................................................................................................... 36 3 4 0.25 1 0 1 0 0
...........................................................AAAAAAAAAAAAAAGAAAAAAAAAACAAAAGAAAGA............................................................................................................................................................ 36 3 4 0.25 1 1 0 0 0
..........................................................AAAAAAAAAAAACAAAAAAAAAAAAACAAAAGAAA.............................................................................................................................................................. 35 2 4 0.25 1 1 0 0 0
........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAGA............................................................................................................................................................... 36 2 20 0.25 5 2 3 0 0
............................................................AAAAAAAAAAAAAAAAAAATAAAAGAAAATATAAAA........................................................................................................................................................... 36 3 4 0.25 1 1 0 0 0
............................................................AAAAAAAAAAAAAGAAAAAATAAACAAAAGAAAAAA........................................................................................................................................................... 36 3 4 0.25 1 1 0 0 0
........................................................AAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAGAA............................................................................................................................................................... 36 2 20 0.25 5 3 2 0 0
..........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAGTAAAGCAGA............................................................................................................................................................. 36 3 4 0.25 1 0 1 0 0
..............................................................AAAAAAAAAAAAAAAAAAAAAAGAGAAGACAAACA.......................................................................................................................................................... 35 3 4 0.25 1 0 1 0 0
...........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAACAAGAAAAA............................................................................................................................................................ 36 2 20 0.25 5 2 3 0 0
..........................................................AAAAAAAAAAAAAAAAAAAATAAGAACAAAAGAAAA............................................................................................................................................................. 36 3 4 0.25 1 0 1 0 0
...........................................................AAAAAAAAAAAAAAAAAAAAAAAAACAACAGAAAAA............................................................................................................................................................ 36 2 4 0.25 1 0 1 0 0
................TCACAGCCAGCATTGATGCACT..................................................................................................................................................................................................................... 22 3 4 0.25 1 1 0 0 0
..........................................................AAAAAAAAAAAAAAAAAAAAAAAAAATGAAAGAAAA............................................................................................................................................................. 36 2 4 0.25 1 0 1 0 0
............................................................AAAACAAAAAAAAAAACAAAAAAAGAAAACAAAAAA........................................................................................................................................................... 36 3 4 0.25 1 0 1 0 0
.........................................................AAAAAAAAAAAAAAAAAAAAAAAAACAGAAAAAAAA.............................................................................................................................................................. 36 2 19 0.21 4 2 2 0 0
.........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAGACAAAAAA.............................................................................................................................................................. 36 2 19 0.21 4 2 2 0 0
................................................................AAAAAAAAAAAAAAAAAAAAGAAAAGAAACAACAA........................................................................................................................................................ 35 3 5 0.20 1 0 1 0 0
....................................................................AAAAAAAAAAAAAAAAATAAAGAAAAAAATAAGAA.................................................................................................................................................... 35 3 5 0.20 1 1 0 0 0
............................................................AAAAAAAACAAAAAAAAAAAAACACAAAAGAAAAAA........................................................................................................................................................... 36 3 5 0.20 1 1 0 0 0
........................................................AAAAAAAAAAAAAAAAAAAAAACAAAAAGAAAAAAA............................................................................................................................................................... 36 2 20 0.20 4 4 0 0 0
................TCACAGCCTGCGTTGATGCGC...................................................................................................................................................................................................................... 21 3 5 0.20 1 1 0 0 0
..........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAGACAAGC................................................................................................................................................................ 33 2 5 0.20 1 0 1 0 0
............................................................AAAAAAAAAAAAAAAAAAATAAAAGAAAACAAACAA........................................................................................................................................................... 36 3 5 0.20 1 1 0 0 0
..........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAA.............................................................................................................................................................. 35 1 20 0.20 4 0 4 0 0
.......................................................TAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAGA................................................................................................................................................................ 36 2 5 0.20 1 1 0 0 0
.............................................................AAAAAAAAAAAAAAAAAAAAAACAAAAAGAAAAAAA.......................................................................................................................................................... 36 2 20 0.20 4 4 0 0 0
.........................................................AAAAAAAAAAAAAAAAAAAAAAAAAAACAAACGAAA.............................................................................................................................................................. 36 2 5 0.20 1 0 1 0 0
............................................................AAAAAAAAAAAAAAAAAAAAAACACACAAGAAAAAA........................................................................................................................................................... 36 3 5 0.20 1 1 0 0 0
...........................................................AAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAACAA............................................................................................................................................................ 36 2 20 0.20 4 2 2 0 0
.....................................................AGAAAAAAAAAAAAAAAAAAAAAAAAAACAAGAGAA.................................................................................................................................................................. 36 3 5 0.20 1 1 0 0 0
..........................................................AAAAAAAAAAAAAAAAAAAAAAAAAACAACAGAAA.............................................................................................................................................................. 35 2 5 0.20 1 1 0 0 0
........................................................AGAAAAAAAAAAAAAAAAAAAAAAAAAACAAGAGAA............................................................................................................................................................... 36 3 5 0.20 1 1 0 0 0
.................................................................TAAAAAAAAAAAAAAAAAAGAAAAGACAAAAAAAAA...................................................................................................................................................... 36 3 5 0.20 1 1 0 0 0
.................................................................AAAAAAAAAAAAAAAAAAAAAAAAGAAGAAAATAAA...................................................................................................................................................... 36 2 5 0.20 1 0 1 0 0
.........................................................AAAAAAAAAAAAAAAAAAAAAAAAGAAGAAAATAAA.............................................................................................................................................................. 36 2 5 0.20 1 0 1 0 0

Anti-sense strand reads

ATGTCGCTGTTGTCGGAGTGTAGGACGTAACTACGTGGGTGAGTGACCTGCATTCATTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTCTTTTTTTATTTTTTCATACTCTAAAGCCGTCGACGATTAAAGAAATCAAAAAAAAAAAACCAAAGAAAATAAAAAGGAAAAATGACATACATCAATTATAATTATTTTTTGTTTTGTTTTCATGTAATACAAATTCCCATGTTTTTTTGGCTTTTGCTTCC
**************************************************...((((((((.............(((((.((((((((....(((((.((((((.((.((((((..(((....)))))))))..)).)))))).)))))..)))))))).)))))..))))))))..........................************************************************** 		Read size # Mismatch Hit Count Total Norm Total V057
head
 V042
embryo
 M042
female body
.........TTGTCGAAGTGTAGGACCTAT............................................................................................................................................................................................................................. 21 3 4 0.25 1 1 0 0
...........................................................TTTTTTTTTTTTTTTTTTTTTTTTTGTTTTCT................................................................................................................................................................ 32 1 8 0.13 1 0 1 0
................................................................TTTTTTTTTTTTTTTTTTTTC...................................................................................................................................................................... 21 0 20 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_6:4212892-4213142 + dpe_1914 TACAGCGACAACAGCCTCACATCCTGCATTGATGCACCCACTCACTGGACGTAAGTAAAAAAAAAA-AAAAAA-----------A-A---------------------------------------AAAAAA---AA---AAGAAAAGAAAAAAATAAAAAAGT---------------------ATGAGA-----TTTCGGCAG-CTGCTAA-TTT-CTTTAGTTTTTTT-TT-TTTG-----GTT--------------------------TCTTTTATTTTTCC----------------------------TTTTTACTGTATGTAGTTAATATTAAT------AAAAAA--------------C-AAA---ACAAAAG--TA---CATTATG-TTTA-----AGGGTACAAAAAAACCGAAA----A--CGAAGG
dp5 2:28885455-28885682 + TACAGCGACAACAGCCTCACATCCTGCATTGATGCACCCACTCACTGGACGTAAGTAAAAAAAAAA-ACA-----------------------------------------------------------------------AGAAAAGAAAAATAAAA----------------AAAAG-----AATGAGA-----TTTCGGCAG-CTGCTAA-TTT-CTTTAGTTTTTTTTTG----------GTT--------------------------TCTTTTATTTTTCC----------------------------TTTTTACTGTATGTAGTTAATATTAAT------AAA-AA----------------CAA----A-----AGTA---CATTATG-TTTA-----AGGGTACAAAAAAACCGAAA----A--CGATGG
droWil2 scf2_1100000004902:4856034-4856331 - dwi_2493 TACAGCGACAACAGCCTCACATCCTGCATTGATGCACCCACTCACAGGACGTAAGTAAAAAAAAAA-AAAAAG-----------A-AAA-----------A-------------------AG----A----A---AA---AAG-----------------------AAACAAAAGCAAG-----AAAAAGA-----ACATTTCAAATTGCTACATTT-CTTT-------TTTTG----------GTTCACTTA---ACAATTTCTTTTTTTCTTCTTTTTTTTTTCTTTTTTTTTTTGTTTGTTTGTTTGTATG-GTT--TATGTATGTAGTTAATAAAAAT------TAAATA-------TA-----A-CAATTATCAA-----TATCAAATTATGGTTTATATATATGGTACGAAA----CGAACGCGTACGCCAAGG
droVir3 scaffold_13047:6844850-6845083 - dvi_15764 TACAGCGACAACAGCCTCACATCCTGCATTGATGCACCCACTCACTGGACGTAAGTAAAAAAAAAA-AAATTG-----------AAAAA-------------------------------TTG--AAAAAAA---AA---AAG----------------------------AAAAGGAA-----AATCTCA-----ACTCAGCAA-CTGCTAG-TTTTCTTT-CTTTTGGTTAA---------------------------------------TCTA----TTCTCT-------------------------TGGTTTT-TATGTATGTAGTTAATAGTTAATAA---CAAAAA--AAAAATAAAAACACAAA----T-----AC--------T-TC-TTC------GAGCT--------AACGAAC-------CGAAGG
droMoj3 scaffold_6540:2706455-2706680 - TACAGCGACAACAGCCTCACATCCTGCATTGATGCACCCACTCACTGGACGTAAGTAAAAAAAAAA-AAAAAA-----------A------------TTGATTA----------------AC---------T---AA---AA-----------------------------------AA-----AATGAAAGCTCGATTCAGCAG-CTGCTAC-TTT-TTTCTAGTT----AC--------------------AAAATA----------TTCTT-------CTTTTG----------------------------GTT--TATGTATGTAGTAAATAGTAAG------A-AAAACAAAAAATAAAAACA------CACAA-----TAT-----T-TA-CTTC-----AAGCTA--------ACGAAT-------CGATGG
droGri2 scaffold_14830:2719380-2719614 - TACAGCGACAACAGCCTCACATCCTGCATTGATGCACCCTCTCACTGGACGTAAGTAAAAAACAAT-TGAAAAA----------AATAA------------ACAAA--------------------AAAAAA---AA---AAG-----------------------------AAAAGAA-----AAGCTCA-----ACTCAGCAG-CTGACAG-TTT-TTTTTTTT-TTTTTTGTTTTGGTTAA---------AAA------------------CTA----TTTTCT-------------------------TG-GTT--TATGTATGTAGTAACTAGTTAC------A---AA--CTAAATGAAAACA-CAA----T-----AA--------TCT----C------GAGCT--------ACCGAAC-------CGAAGG
droAna3 scaffold_13340:11881933-11882141 - TACAGCGACAACAGCCTCACATCCTGCATTGATGCACCCACTCACTGGACGTAAGTAAAAAAA------------------------AA-------------------------------TCT--AAAAAGA---AA---AAG-----------------------------AAACCAA-----AATGAGA-----ACTCGGCAG-CCGCTAA-TTT-CTATAATTTTGTTTGA----------------------------------------------TTTTTCT----------------------------TTT--TGTGTATGTAGTTGATATTTTTA--T--GAA-AA--------------C-CAA----A-----AC--------TATG-TTTA-----AGGGTACAAGAGCTCCTAAT-------CGAAGG
droBip1 scf7180000396691:771669-771884 - TACAGCGACAACAGCCTCACATCCTGCATTGATGCACCCACTCACTGGACGTAAGTAAAAGATAAA-AAA----------------AAA-------------------------------TCT--AAAAAGA---AA---AAG-----------------------------AAACCAA-----AATGAGA-----ACTCGGCAG-CTGCTAA-TTT-CTATGATTTTGTTTGA----------------------------------------C------TTTTCT----------------------------TTT--TGTGTATGTAGTTGATATTTATA-----TAAAAA--------------C-CAA----A-----AC--------TATG-TTTA-----AGGGTACAAGAGCTCCTAAT-------CGAAGG
droKik1 scf7180000302809:460325-460541 - TACAGCGACAACAGCCTCACATCCTGCATTGATGCACCCACTCACTGGACGTAAGTAAAAA-TGAAAAGA----------------AAA-------------------------------TC----AAAAGA---AAAAGA---------------------------ACAA-AACCAA-----AATGAGA-----TCTCGGCAG-CTGCTAA-TTT-CTTTAATTTTGTTTCG-----------------------------------------------T-TTCC----------------------------TTT--TGTGTATGTAGTTGATATTTAT------AAGAAA--------------C-CAA---ATA----AC--------TATG-TTTA-----AGGGTACAACAAAACCGAAC-------CGAAGG
droFic1 scf7180000453800:319249-319488 + TACAGCGACAACAGCCTCACATCCTGCATTGATGCACCCACTCACTGGACGTAAGTAAAAAATAAA-AAAGAA-----------A-AAAAAACAAAACAAAACAAAAA-------ATAAATC----AAAAGA---AA-----------------------------AACCAAAT-----------ATGAGA-----ACTCGGCAG-CTGCTAA-TTT-CTTTCATTTTGTTTTG-----------------------------------------------TTTTCC----------------------------TTT--TGTGTATGTAGTTGATATTTATAAA---CAAAAA--------------C-CAA----T-----GA--------TATG-TTTA-----AGGGTACAAGAAATCCGAAC-------CGAAGG
droEle1 scf7180000491008:2429902-2430116 - TACAGCGACAACAGCCTCACATCCTGCATTGATGCACCCACTCACTGGACGTAAGTAAAAAATGAA-AAG----------------AAA-------------------------------TC----AAAAGA---AA-----------------------------AACCAAATACCAA-----AATGAGA-----ACTCGGCAG-CTGCTAA-TTT-CTTAAATTTTGTTTTG-----------------------------------------------TTTTCC----------------------------TTT--TGTGTATGTAGTTGATATTTAT------AAAAAA--------------C-CAA----T-----AA--------TATG-TTTA-----AGGGTACAAGAAATCCGAAC-------CAAAGG
droRho1 scf7180000758593:3486-3703 + TACAGCGACAACAGCCTCACATCCTGCATTGATGCACCCACTCACTGGACGTAAGTAAAAAATAAA-AAAA-------------AAAAT-------------------------------TC----AAAAGA---AA-----------------------------AACAAAATACAAA-----AATGAGA-----ACTCGGCAG-CTGCTAA-TTT-CTTTAATTTTGTTTCG-----------------------------------------------TTTTCC----------------------------TTT--TGTGTATGTAGTTGATATTTAT------GAAAAA--------------C-CAA----T-----AA--------TATG-TTTA-----AGGGTACAAGAAATCCGAAC-------CGAAGG
droBia1 scf7180000302075:3317647-3317876 + TACAGCGACAACAGCCTCACATCCTGCATTGATGCACCCACTCACTGGACGTAAGTAAAAAATAAA-AAACCA-AACCAAAAAAAAAAA-------------------------------TC----AAAAGA---AA-----------------------------AACCAAATACCAA-----AATGAGA-----ACTCGGCAG-CTGCTAA-TTT-CTTGAGTTTTATTTCG-----------------------------------------------TTTTCC----------------------------TTT--TGTGTATGTAGTTGATATTTAT------GAAAAA--------------C-CGA----T-----AA--------TATG-TTTA-----AGGGTACAAGAAATCCGAAC-------CGAAGG
droTak1 scf7180000415417:792141-792357 + TACAGCGACAACAGCCTCACATCCTGCATTGATGCACCCACTCACTGGACGTAAGTAAAAAATAAA-AAATA------------AAAAA-------------------------------TC----AAAAGA---AA-----------------------------AACCAAATACCAA-----AATGAGA-----ACTCGGCAG-CTGCTAA-TTT-CTTTGATTTTATTTCG-----------------------------------------------TTTTCC----------------------------TTT--TGTGTATGTAGTTGATATTTAT------GAA--A--------------C-CAA----T-----AA--------TATG-TTTA-----AGGGTACAAGAAATCCGAAC-------GTAAGG
droEug1 scf7180000409246:182748-182963 + TACAGCGACAACAGCCTCACATCCTGCATTGATGCACCCACTCACTGGACGTAAGTAAAAAAAAAA-TGAAAA-----------AAAAA-------------------------------TC----AAAAGA---AA-----------------------------AACCAAATACCAA-----AATGAGA-----ACTCGGCAG-CTGCTAA-TTT-CTTAAATTTTATTTCG-----------------------------------------------TTTTCC----------------------------TTT--TGTGTATGTAGTTGATATTTCTA--TATAAA--------------------------------AA--------TATG-TTTA-----AGGGTACAAGAAATCCGAAC-------CGAAGG
dm3 chr3R:13834682-13834935 + TACAGCGACAACAGCCTCACATCCTGCATTGATGCACCCACTCACTGGACGTAAGTAAAAAAAAAA-AAAAAA-----------A------------CTGAACAAAAA-------ATAAA----------------T---AAATAACGAGAAATTATCAAAAGCAAAACCAAATAGCTA-----TATGAGA-----ACTCAGCAG-CTGCTAA-TTT-CTTTGAGTTTGTTTTG-----------------------------------------------TTTTCC----------------------------TTT--TGTGTATGTAGTTGAGATCTAT------GAAATA--------------C-CAA----T-----ACTA---TTGTATG-TTTA-----AGGGTACAAGAAATCCGAAC-------CGAAGG
droSim2 3r:7435835-7436070 - dsi_27453 TACAGCGACAACAGCCTCACATCCTGCATTGATGCACCCACTCACTGGACGTAAGTAAAAAAAAA---------------------------------TGAACAAAAA-------ATAAAAC-AAATATAAA---AA---CAGTAACGAGAAATTATCAAAAGCAAA---------------------AGA-----ACTCGGCAG-CTGCTAA-TTT-CTTTGAGTTTGTTTTG-----------------------------------------------TTTTCC----------------------------TTT--TGTGTATGTAGTTGATATCTAT------GAAATA--------------C-CGA----T-----AC--------TATG-TTTA-----AGGGTACAAGAAATCCGAAC-------CGAAGG
droSec2 scaffold_12:321577-321821 - TACAGCGACAACAGCCTCACATCCTGCATTGATGCACCCACTCACTGGACGTAAGTAAAAAACAAA-AAAAAA-----------A------------ATGAACAAAAA-------ATAAAAT-AAATATAAA---AA---CAGTAACGAGAAATTATCAAAAGCAAA---------------------AGA-----ACTCGGCAG-CTGCTAA-TTT-CTTTGAGTTTGTTTTG-----------------------------------------------TTTTCC----------------------------TTT--TGAGTATGTAGTTGATATCTAT------GAAATG--------------C-CGA----T-----AC--------TATG-TTTA-----AGGGTACAAGAAATCCGAAC-------CGAAGG
droYak3 3R:2428344-2428605 + TACAGCGACAACAGCCTCACATCCTGCATTGATGCACCCACTCACTGGACGTAAGTAAAAAATGA------------------------------------ACAAAAAATGAAAAATAAAAC-AAATATAAAACAAA---CAGTAA--AGAAATAATCAAAAGTAAAACCAAATAGCAAAACGAAATGAGA-----GCTCGGCAG-CTGCTAG-TTT-CATTGAGTTTGTTTTG-----------------------------------------------TTTTCC----------------------------TTT--TGTGTATGTAGTTGATATTTAT------GAAATA--------------C-CGA----T-----AG--------TATG-TGTA-----AGGGTACAAGAAATCCGAGC-------CGAAGG
droEre2 scaffold_4770:7791210-7791456 - TACAGCGACAACAGCCTCACATCCTGCATTGATGCACCCACTCACTGGACGTAAGTAAAAAATAAA------------------------------------CAAAAA-------ATAAAAC-AAATATAAA---AA---CAGTAAAG-GAAATTATCAAAAGTAAAACCAAATAGCA------AATGAGA-----ACTCGGCAG-CTGCTAA-TTT-CTTTGAGTTTGTTTTG-----------------------------------------------TTTTCC----------------------------TTT--TGTGTATGTAGTTGATATCTAT------GAAATA--------------C-CGA----T-----AG--------TATG-TTTA-----AGGGTACAAGAAATCCGAAC-------CGAAGG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
TACAGCGACAACAGCCTCACATCCTGCATTGATGCACCCACTCACTGGACGTAAGTAAAAAAAAAA-AAAAAA-----------A-A---------------------------------------AAAAAA---AA---AAGAAAAGAAAAAAATAAAAAAGT---------------------ATGAGA-----TTTCGGCAG-CTGCTAA-TTT-CTTTAGTTTTTTT-TT-TTTG-----GTT--------------------------TCTTTTATTTTTCC----------------------------TTTTTACTGTATGTAGTTAATATTAAT------AAAAAA--------------C-AAA---ACAAAAG--TA---CATTATG-TTTA-----AGGGTACAAAAAAACCGAAA----A--CGAAGGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................AAAAAAAAAA-AAAAAA-----------A-A---------------------------------------AAAAAA---AA---AAGAAAAGAA..................................................................................................................................................................................................................................................................................................3616.006003030
..........................................................AAAAAAAA-AAAAAA-----------A-A---------------------------------------AAAAAA---AA---AAGAAAAGAAAA................................................................................................................................................................................................................................................................................................3612.002001010
.............................................................AAAAA-AAAAAA-----------A-A---------------------------------------AAAAAA---AA---AAGAAAAGAAAAAAA.............................................................................................................................................................................................................................................................................................3612.002002000
............................................................AAAAAA-AAAAAA-----------A-A---------------------------------------AAAAAA---AA---AAGAAAAGAAAAAA..............................................................................................................................................................................................................................................................................................3612.002001010
..........................................................AAAAAAAA-AAAAAA-----------A-A---------------------------------------AAAA......................................................................................................................................................................................................................................................................................................................20201.65330330000
.............................................................AAAAA-AAAAAA-----------A-A---------------------------------------AAAAAA---AA---............................................................................................................................................................................................................................................................................................................21201.60320320000
...........................................................AAAAAAA-AAAAAA-----------A-A---------------------------------------AAAAAA---AA---AAGAAAAGAAAAT...............................................................................................................................................................................................................................................................................................3611.001000010
...............................................................AAA-AAAAAA-----------A-A---------------------------------------AAAAAA---AA---AAGAAAAGAAAAAAAC............................................................................................................................................................................................................................................................................................3511.001001000
.........................................................AAAAAAAAA-AAAAAA-----------A-A---------------------------------------AAAAAA---AA---AAGAAAAGAAA.................................................................................................................................................................................................................................................................................................3611.001001000
........................................................AAAAAAAAAA-AAAAAA-----------A-A---------------------------------------AAAAAA---A................................................................................................................................................................................................................................................................................................................25200.85171700000
..........................................................AAAAAAAA-AAAAAA-----------A-A---------------------------------------AAAAAA---AA---A...........................................................................................................................................................................................................................................................................................................25200.306060000
..............................................................AAAA-AAAAAA-----------A-A---------------------------------------AAAAAA---AA---AAGAAAAGAAAAAACA............................................................................................................................................................................................................................................................................................3640.251001000
........................................................AAAAAAAAAA-AAAAAA-----------A-A---------------------------------------AAAAAA---AA---AA..........................................................................................................................................................................................................................................................................................................28200.255050000
dp5
TACAGCGACAACAGCCTCACATCCTGCATTGATGCACCCACTCACTGGACGTAAGTAAAAAAAAAA-ACA-----------------------------------------------------------------------AGAAAAGAAAAATAAAA----------------AAAAG-----AATGAGA-----TTTCGGCAG-CTGCTAA-TTT-CTTTAGTTTTTTTTTG----------GTT--------------------------TCTTTTATTTTTCC----------------------------TTTTTACTGTATGTAGTTAATATTAAT------AAA-AA----------------CAA----A-----AGTA---CATTATG-TTTA-----AGGGTACAAAAAAACCGAAA----A--CGATGGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droWil2
TACAGCGACAACAGCCTCACATCCTGCATTGATGCACCCACTCACAGGACGTAAGTAAAAAAAAAA-AAAAAG-----------A-AAA-----------A-------------------AG----A----A---AA---AAG-----------------------AAACAAAAGCAAG-----AAAAAGA-----ACATTTCAAATTGCTACATTT-CTTT-------TTTTG----------GTTCACTTA---ACAATTTCTTTTTTTCTTCTTTTTTTTTTCTTTTTTTTTTTGTTTGTTTGTTTGTATG-GTT--TATGTATGTAGTTAATAAAAAT------TAAATA-------TA-----A-CAATTATCAA-----TATCAAATTATGGTTTATATATATGGTACGAAA----CGAACGCGTACGCCAAGGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................ATATATGGTACGAAA----CGAACGCGTA........2511.00101000
.......................................................TAAAAAAAAAA-AAAAAG-----------A-AAA-----------A-------------------A...............................................................................................................................................................................................................................................................................................................................2330.33100010
...............................................................AAA-AAAAAG-----------A-AAA-----------A-------------------AG----A----A---AA---AAG-----------------------AAAA..............................................................................................................................................................................................................................................................................27120.08100010
droVir3
TACAGCGACAACAGCCTCACATCCTGCATTGATGCACCCACTCACTGGACGTAAGTAAAAAAAAAA-AAATTG-----------AAAAA-------------------------------TTG--AAAAAAA---AA---AAG----------------------------AAAAGGAA-----AATCTCA-----ACTCAGCAA-CTGCTAG-TTTTCTTT-CTTTTGGTTAA---------------------------------------TCTA----TTCTCT-------------------------TGGTTTT-TATGTATGTAGTTAATAGTTAATAA---CAAAAA--AAAAATAAAAACACAAA----T-----AC--------T-TC-TTC------GAGCT--------AACGAAC-------CGAAGGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................TGCACCCACTCACTGGAC......................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000000000000000000000000000000000000000000000000000000000000
..............................................................AAAA-AAATTG-----------AAAAA-------------------------------TTG--AT.........................................................................................................................................................................................................................................................................................................................2050.201000100000000000000000000000000000000000000000000000000000000000
droMoj3
TACAGCGACAACAGCCTCACATCCTGCATTGATGCACCCACTCACTGGACGTAAGTAAAAAAAAAA-AAAAAA-----------A------------TTGATTA----------------AC---------T---AA---AA-----------------------------------AA-----AATGAAAGCTCGATTCAGCAG-CTGCTAC-TTT-TTTCTAGTT----AC--------------------AAAATA----------TTCTT-------CTTTTG----------------------------GTT--TATGTATGTAGTAAATAGTAAG------A-AAAACAAAAAATAAAAACA------CACAA-----TAT-----T-TA-CTTC-----AAGCTA--------ACGAAT-------CGATGGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......ACAACAGCCTCACATCCTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
droGri2
TACAGCGACAACAGCCTCACATCCTGCATTGATGCACCCTCTCACTGGACGTAAGTAAAAAACAAT-TGAAAAA----------AATAA------------ACAAA--------------------AAAAAA---AA---AAG-----------------------------AAAAGAA-----AAGCTCA-----ACTCAGCAG-CTGACAG-TTT-TTTTTTTT-TTTTTTGTTTTGGTTAA---------AAA------------------CTA----TTTTCT-------------------------TG-GTT--TATGTATGTAGTAACTAGTTAC------A---AA--CTAAATGAAAACA-CAA----T-----AA--------TCT----C------GAGCT--------ACCGAAC-------CGAAGGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
TACAGCGACAACAGCCTCACATCCTGCATTGATGCACCCACTCACTGGACGTAAGTAAAAAAA------------------------AA-------------------------------TCT--AAAAAGA---AA---AAG-----------------------------AAACCAA-----AATGAGA-----ACTCGGCAG-CCGCTAA-TTT-CTATAATTTTGTTTGA----------------------------------------------TTTTTCT----------------------------TTT--TGTGTATGTAGTTGATATTTTTA--T--GAA-AA--------------C-CAA----A-----AC--------TATG-TTTA-----AGGGTACAAGAGCTCCTAAT-------CGAAGGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................TCACATCCTGCATTGATGCACCC.................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
.............................................................................................................................AAAAAGA---AA---AAG-----------------------------AAACCA......................................................................................................................................................................................................................................................................1830.331010000
droBip1
TACAGCGACAACAGCCTCACATCCTGCATTGATGCACCCACTCACTGGACGTAAGTAAAAGATAAA-AAA----------------AAA-------------------------------TCT--AAAAAGA---AA---AAG-----------------------------AAACCAA-----AATGAGA-----ACTCGGCAG-CTGCTAA-TTT-CTATGATTTTGTTTGA----------------------------------------C------TTTTCT----------------------------TTT--TGTGTATGTAGTTGATATTTATA-----TAAAAA--------------C-CAA----A-----AC--------TATG-TTTA-----AGGGTACAAGAGCTCCTAAT-------CGAAGGSizeHit CountTotal NormTotal
No Reads
droKik1
TACAGCGACAACAGCCTCACATCCTGCATTGATGCACCCACTCACTGGACGTAAGTAAAAA-TGAAAAGA----------------AAA-------------------------------TC----AAAAGA---AAAAGA---------------------------ACAA-AACCAA-----AATGAGA-----TCTCGGCAG-CTGCTAA-TTT-CTTTAATTTTGTTTCG-----------------------------------------------T-TTCC----------------------------TTT--TGTGTATGTAGTTGATATTTAT------AAGAAA--------------C-CAA---ATA----AC--------TATG-TTTA-----AGGGTACAACAAAACCGAAC-------CGAAGGSizeHit CountTotal NormTotal
No Reads
droFic1
TACAGCGACAACAGCCTCACATCCTGCATTGATGCACCCACTCACTGGACGTAAGTAAAAAATAAA-AAAGAA-----------A-AAAAAACAAAACAAAACAAAAA-------ATAAATC----AAAAGA---AA-----------------------------AACCAAAT-----------ATGAGA-----ACTCGGCAG-CTGCTAA-TTT-CTTTCATTTTGTTTTG-----------------------------------------------TTTTCC----------------------------TTT--TGTGTATGTAGTTGATATTTATAAA---CAAAAA--------------C-CAA----T-----GA--------TATG-TTTA-----AGGGTACAAGAAATCCGAAC-------CGAAGGSizeHit CountTotal NormTotal
No Reads
droEle1
TACAGCGACAACAGCCTCACATCCTGCATTGATGCACCCACTCACTGGACGTAAGTAAAAAATGAA-AAG----------------AAA-------------------------------TC----AAAAGA---AA-----------------------------AACCAAATACCAA-----AATGAGA-----ACTCGGCAG-CTGCTAA-TTT-CTTAAATTTTGTTTTG-----------------------------------------------TTTTCC----------------------------TTT--TGTGTATGTAGTTGATATTTAT------AAAAAA--------------C-CAA----T-----AA--------TATG-TTTA-----AGGGTACAAGAAATCCGAAC-------CAAAGGSizeHit CountTotal NormTotal
No Reads
droRho1
TACAGCGACAACAGCCTCACATCCTGCATTGATGCACCCACTCACTGGACGTAAGTAAAAAATAAA-AAAA-------------AAAAT-------------------------------TC----AAAAGA---AA-----------------------------AACAAAATACAAA-----AATGAGA-----ACTCGGCAG-CTGCTAA-TTT-CTTTAATTTTGTTTCG-----------------------------------------------TTTTCC----------------------------TTT--TGTGTATGTAGTTGATATTTAT------GAAAAA--------------C-CAA----T-----AA--------TATG-TTTA-----AGGGTACAAGAAATCCGAAC-------CGAAGGSizeHit CountTotal NormTotal
No Reads
droBia1
TACAGCGACAACAGCCTCACATCCTGCATTGATGCACCCACTCACTGGACGTAAGTAAAAAATAAA-AAACCA-AACCAAAAAAAAAAA-------------------------------TC----AAAAGA---AA-----------------------------AACCAAATACCAA-----AATGAGA-----ACTCGGCAG-CTGCTAA-TTT-CTTGAGTTTTATTTCG-----------------------------------------------TTTTCC----------------------------TTT--TGTGTATGTAGTTGATATTTAT------GAAAAA--------------C-CGA----T-----AA--------TATG-TTTA-----AGGGTACAAGAAATCCGAAC-------CGAAGGSizeHit CountTotal NormTotal
No Reads
droTak1
TACAGCGACAACAGCCTCACATCCTGCATTGATGCACCCACTCACTGGACGTAAGTAAAAAATAAA-AAATA------------AAAAA-------------------------------TC----AAAAGA---AA-----------------------------AACCAAATACCAA-----AATGAGA-----ACTCGGCAG-CTGCTAA-TTT-CTTTGATTTTATTTCG-----------------------------------------------TTTTCC----------------------------TTT--TGTGTATGTAGTTGATATTTAT------GAA--A--------------C-CAA----T-----AA--------TATG-TTTA-----AGGGTACAAGAAATCCGAAC-------GTAAGGSizeHit CountTotal NormTotal
No Reads
droEug1
TACAGCGACAACAGCCTCACATCCTGCATTGATGCACCCACTCACTGGACGTAAGTAAAAAAAAAA-TGAAAA-----------AAAAA-------------------------------TC----AAAAGA---AA-----------------------------AACCAAATACCAA-----AATGAGA-----ACTCGGCAG-CTGCTAA-TTT-CTTAAATTTTATTTCG-----------------------------------------------TTTTCC----------------------------TTT--TGTGTATGTAGTTGATATTTCTA--TATAAA--------------------------------AA--------TATG-TTTA-----AGGGTACAAGAAATCCGAAC-------CGAAGGSizeHit CountTotal NormTotal
No Reads
dm3
TACAGCGACAACAGCCTCACATCCTGCATTGATGCACCCACTCACTGGACGTAAGTAAAAAAAAAA-AAAAAA-----------A------------CTGAACAAAAA-------ATAAA----------------T---AAATAACGAGAAATTATCAAAAGCAAAACCAAATAGCTA-----TATGAGA-----ACTCAGCAG-CTGCTAA-TTT-CTTTGAGTTTGTTTTG-----------------------------------------------TTTTCC----------------------------TTT--TGTGTATGTAGTTGAGATCTAT------GAAATA--------------C-CAA----T-----ACTA---TTGTATG-TTTA-----AGGGTACAAGAAATCCGAAC-------CGAAGGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................................................................................................................................................................................................................TTTCC----------------------------TTT--TGTGTATGTAGT............................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TCCTGCATTGATGCACCCACTCACTGGAC......................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CCTGCATTGATGCACCCACTCACTGGAC......................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................T--TGTGTATGTAGTTGAGATCTAT------GA..........................................................................................2511.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................ATAACGAGAAATTATCAAAA......................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GACAACAGCCTCACATCCTGCATT..........................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................TGTATGTAGTTGAGATCTAT------GA..........................................................................................2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................ATAACGAGAAATTATCAAA.......................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................TCC----------------------------TTT--TGTGTATGTAGTTGAGAT......................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
...................................................TAAGTAAAAAAAAAA-AAAAA................................................................................................................................................................................................................................................................................................................................................................................2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................AGTAAAAAAAAAA-AAAAAA-----------....................................................................................................................................................................................................................................................................................................................................................................19200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................TGGACGTAAGTAAAAAAGT........................................................................................................................................................................................................................................................................................................................................................................................1940.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TACAGCGACAACAGCCTCACATCCTGCATTGATGCACCCACTCACTGGACGTAAGTAAAAAAAAA---------------------------------TGAACAAAAA-------ATAAAAC-AAATATAAA---AA---CAGTAACGAGAAATTATCAAAAGCAAA---------------------AGA-----ACTCGGCAG-CTGCTAA-TTT-CTTTGAGTTTGTTTTG-----------------------------------------------TTTTCC----------------------------TTT--TGTGTATGTAGTTGATATCTAT------GAAATA--------------C-CGA----T-----AC--------TATG-TTTA-----AGGGTACAAGAAATCCGAAC-------CGAAGGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................................................................................................................................................................................................TT-CTTTGAGTTTGTT.................................................................................................................................................................................................................1520.50100000010000000000
droSec2
TACAGCGACAACAGCCTCACATCCTGCATTGATGCACCCACTCACTGGACGTAAGTAAAAAACAAA-AAAAAA-----------A------------ATGAACAAAAA-------ATAAAAT-AAATATAAA---AA---CAGTAACGAGAAATTATCAAAAGCAAA---------------------AGA-----ACTCGGCAG-CTGCTAA-TTT-CTTTGAGTTTGTTTTG-----------------------------------------------TTTTCC----------------------------TTT--TGAGTATGTAGTTGATATCTAT------GAAATG--------------C-CGA----T-----AC--------TATG-TTTA-----AGGGTACAAGAAATCCGAAC-------CGAAGGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................................................................................................................................................................................................................TTTG-----------------------------------------------TTTTCC----------------------------TTT--TGAGTATGTAGTTG..........................................................................................................2711.0010010
.........................................................................................................................................................................................................................................G-----------------------------------------------TTTTCC----------------------------TTT--TGAGTATGTAGTT...........................................................................................................2311.0010100
droYak3
TACAGCGACAACAGCCTCACATCCTGCATTGATGCACCCACTCACTGGACGTAAGTAAAAAATGA------------------------------------ACAAAAAATGAAAAATAAAAC-AAATATAAAACAAA---CAGTAA--AGAAATAATCAAAAGTAAAACCAAATAGCAAAACGAAATGAGA-----GCTCGGCAG-CTGCTAG-TTT-CATTGAGTTTGTTTTG-----------------------------------------------TTTTCC----------------------------TTT--TGTGTATGTAGTTGATATTTAT------GAAATA--------------C-CGA----T-----AG--------TATG-TGTA-----AGGGTACAAGAAATCCGAGC-------CGAAGGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................................................................................................................................................GAAATGAGA-----GCTCGGCAG-CTG.......................................................................................................................................................................................................................................2120.50100000010000
droEre2
TACAGCGACAACAGCCTCACATCCTGCATTGATGCACCCACTCACTGGACGTAAGTAAAAAATAAA------------------------------------CAAAAA-------ATAAAAC-AAATATAAA---AA---CAGTAAAG-GAAATTATCAAAAGTAAAACCAAATAGCA------AATGAGA-----ACTCGGCAG-CTGCTAA-TTT-CTTTGAGTTTGTTTTG-----------------------------------------------TTTTCC----------------------------TTT--TGTGTATGTAGTTGATATCTAT------GAAATA--------------C-CGA----T-----AG--------TATG-TTTA-----AGGGTACAAGAAATCCGAAC-------CGAAGGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................................................................................................................................................AAAG-GAAATTATCAAAAGT....................................................................................................................................................................................................................................................................................1911.0011000000

Generated: 06/08/2015 at 04:52 PM