dpe_1875

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- AAGCAGAGACAGCATGACAGCACTGGGATTAGTTTTGCTATCAATGATGGGTAAGTGTGTAAGCGAGACAGCAGTGAGTGGGAGTGAGATTGCGAGTGGGAGTGGAGATCGGGAGACAGTGAGTGGTCTTATCGCATGCCCCTGAACATCGCCATAAAACATGGTCGAGAGGGGTCTTATCGAGGCATTCTGCACATCTATCACAGCTGCAATCAGCGTCAGTCGAGCAGGAATATCGTATATGTACATCG ************************************************............((......)).....(((((.((((((.(((..(((.((...(((((((............))))))).)).)))((((((.....(((((((.....)))).))).)))))).........))).))).))).)))))************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M021 embryo	V111 male body
..........................GATTAGTTTTGCTATCAATGATGGGCT......................................................................................................................................................................................................	27	2	1	3.00	3	3	0
.................................TTTGCTATCAATGATGGGCT......................................................................................................................................................................................................	20	2	1	2.00	2	2	0
...............................................................................................................................CTTATCGCATGCCCCTGAACATCGCC..................................................................................................	26	0	1	1.00	1	1	0
..........................GATTAGTTTTGCTATCAATGATGGGCC......................................................................................................................................................................................................	27	2	1	1.00	1	1	0
................................................................GATAAGGCAGTGAGTGGGAGTG.....................................................................................................................................................................	22	3	6	0.17	1	0	1
.................................TTTGCTAGCAATGATGGGCT......................................................................................................................................................................................................	20	3	14	0.07	1	1	0
......................................................................................AGACAGCGAGTGGGAGTGGA.................................................................................................................................................	20	2	15	0.07	1	0	1
.......................................................................CAGTGAGTGGGAGTGAAAGGG...............................................................................................................................................................	21	3	20	0.05	1	0	1

TTCGTCTCTGTCGTACTGTCGTGACCCTAATCAAAACGATAGTTACTACCCATTCACACATTCGCTCTGTCGTCACTCACCCTCACTCTAACGCTCACCCTCACCTCTAGCCCTCTGTCACTCACCAGAATAGCGTACGGGGACTTGTAGCGGTATTTTGTACCAGCTCTCCCCAGAATAGCTCCGTAAGACGTGTAGATAGTGTCGACGTTAGTCGCAGTCAGCTCGTCCTTATAGCATATACATGTAGC ************************************************............((......)).....(((((.((((((.(((..(((.((...(((((((............))))))).)).)))((((((.....(((((((.....)))).))).)))))).........))).))).))).)))))************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V057 head
.....................................................................................................................................AGTACGGGGACTTGCAGGGGTA................................................................................................	22	3	2	0.50	1	1
..........................................................................................................................................GGGGACTTGGAGCTGTAT...............................................................................................	18	2	6	0.17	1	1
........................................................................................................................................ACGGGGGCTTGTAGGGATA................................................................................................	19	3	20	0.05	1	1

Species	Coordinate	ID	Alignment
droPer2	scaffold_6:906779-907029 -	dpe_1875	AAGCAGAGA-CAGC-----------ATGACAGCACTGGGATTAGTTTTGCTATCAATGATGGGTAAGTGTGTAAGCGAGACAGCAGTGAGTGGGAGTGAGATTGCGAGTGGGAGTGGAGATCGGGAGACAGTGAGT---GGTCTTATCG-CATGCCCCTGAACATC----------------------------------GCCATAAAA---------------------------------------------C-A---------TGGTCG------------------------------------A-----GAGGGGTC-TTATCGAGGCATTCTGCACATCTATCA---CAGCTG-CAATCAGCGTCAGT-CGAG--CAGGAATATCGT------------------ATATGT---------ACATCG
dp5	2:25579056-25579306 -	dps_785	AAGCAGAGA-CAGC-----------ATGACAGCACTGGGATTAGTTCTGCTATCAATGATGGGTAAGTGTGTAAGCGAGACAGCAGTGAGTGGGTGTGAGATTGCGAGTGGGAGTGGAGATCGGGAGACAGTGAGT---GGTCTTATCG-CATGCCCCTGAACATC----------------------------------GCCATAAAA---------------------------------------------C-A---------TGGTCG------------------------------------A-----GAGGGGTC-TTATCGAGGCATTCTGCACATCTATCA---CAGCTG-CAATCAGCGTCAGT-CGAG--CAGGAATATCGT------------------ATATGA---------ACATCG
droWil2	scf2_1100000004902:4198741-4198988 +		-----------------------------------TGGGATTACTTTTGCTATCAATGATGGGTAAGTGA---------------------------------------------------GAGCTCACAGACAGCCCAGTCCTGCCCACCAACACCCATA--TCTAACCAATAAGCCATATCAGTGCGACCCTGAAAAA---------AAA--------AAC-------------------------GATA--AA--AAC-AA-----------AAATAGGCAACAGTTAGCTTGTTAGAG------AAACGACC---TTC-TTATCAGCGCATTCTGCGCGCCTGTCA-----CCGG-CAATTAAATTCAGT-C-CG--CCCTGAAAG----------AGAT------AAT-TATCTCGTCTGTA-ACTA
droVir3	scaffold_10117:3904-3988 +		TCGAG----GCAGC-----------AAGGCAGCGAGGC--------------------------------------------------------------------------------------------------------------AGCAAGGCAGCGAGACA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-AAGG--CAGCGA--------------------------------------------G
droMoj3	scaffold_6540:24766073-24766122 -		----------CAGT-----------ATGACAGCACTTGGATTACTTTTGCTATCTATGATGGGTAAGTGT---------------------------------------------------G----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2	scaffold_14830:2109586-2109633 -		-----------AGT-----------ATGACAGCACTTGGATTACTTTTGCTATCAATGATGGGTAAGTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3	scaffold_13340:13717151-13717362 -	dan_3073	ATATCAAGA-CATC-----------ATGACTGCCCTGGGATTAGTTTTGCTATCAATGATGGGTAAGTTA-------------------------------TTT-----------------CGAGTGCCGGTGAATA--CTTGTTATCGGA-G--------------------------------------------------------------------------GAGGGCGGCGGAATGCTGATAGCTCCTG-CTCACCTGCCTTATCGAGG--------------GGG----------------------------GC-TGCTCTTTGGTTTCTGGGCGCCCATCC---G-CTCGTCAATC-GCGTCAGC-TGGG--CCCTGATAATCC-----AT--------------------------ATATTA
droBip1	scf7180000396615:371436-371634 -		AG------A-CATC-----------ATGACAGCACTGGGATTAGTTTTGCTATCAATGATGGGTAAGTTA-------------------------------TTT-----------------CGAGGGCCG------------GTTATCGGG-----------AGT--------------------------------------------GGA--------GAATGC-----------------TGATAGCTT----CTCACCTGCCTTATCGG-----------------------------------------CAGGGGGC-TGTTCTTTAATTTCTGGGCGCCCATTC---G-CTTGTCAAT-CGCGTCAGC-TGGG--CCCTGATAATAT-----TATAA--------GTATA--------ATATAATA
droKik1	scf7180000302256:773311-773503 -		----------CAAC-----------ATGACAGCATTGGGATTAGTTCTGCTATCAATGATGGGTAAGTGT---------------------------------------------------CGTGTGCTCGAGAGGC-TTTCCTTATCGAG-----------TCT--------------------------------------------GCC------A-AATTGGAGA------------------AGATA--TC--ACA-C---------------------------------------CT----------------GC-TCCTCTACAATTTCTGCTCGCCCGTCCGTCCACCTG-CAATCAGTGTCCGC-TGAG--CCCTGACAGCTG-----TTATAT-------ACATAT---------TTAATA
droFic1	scf7180000453488:565361-565602 +		CATTA----GCAACAACATAACGAAATGACGGCACTGGGATTAGTTTTGCTAACAATGATGGGTAAGTTC---------------------------------------------------AGGGTGTTGGGAAGAC--TTTCTTATCGCATTGCCCCTGAAATT--------------------------------------------GTA--------AACCCA-GG------------------AGATA--TT--AA--AGTCTTATCAGGGGA-----------------------ATCGGTTTG------A---TT-TTAAAATAAAATTTCTGGGCGCCCATCA-----ACTG-CAATCAGCGTCAGT-TGAG--CACTGATAGCCACACACAGTAAT---G--TATATAT---------GCAACG
droEle1	scf7180000491080:2416742-2416961 +		----------CAAC-----------ATGACAGCACTGGGATTAGTTTTGCTATCAATGATGGGTAAGTGG---------------------------------------------------CGGGTGTTAGAGAGCC--TTTGTTATCGACATGCCCCTGGGAAT--------------------------------------------GTG--------AATCGG-AT------------------AGATA--GC--AAG-CCTCTTATCGGGGGT----------ATGGG---------TCG----G------T---TC-TTTTTTTTTAACTTCTGCGCTCCCAACA-----CCTG-CAATCAGCGTCAGC-TGAG--CACTGATAACCC-----CCCGAT------TATATAT---------GCAACG
droRho1	scf7180000779097:33653-33854 +		----------CAAC-----------ATGACAGCACTGGGATTAGTTCTGCTATCAATGATGGGTAAGTGG---------------------------------------------------CGAGTGTTAGAGAGGC--CTTCTTATCGACAAGCCCCTGGGAAT--------------------------------------------GTG--------CCTCTG-AT------------------AGATA--GC--ACA-CGCCTTATCGCGG---------------------------------------------------TTTTTAATTTCTGCGCGCCCATCA-----CCTG-CAATCAGCGTCAGC-TGAG--CACTGATAGCCT-----GACACT------AATATAT---------GCATCG
droBia1	scf7180000302075:3471239-3471454 +		----------CAAC-----------ATGACGGCACTGGGATTAGTTTTGCTATCCATGATGGGTAAGTGG---------------------------------------------------CGGGCTTTTGGGGCT-TGCTTCTTATCGACATGCCCCTGAGAGC--------------------------------------------ACC------AAAATTGA-CT------------------AGATA--C-ACGAGCCGCCTTATCGCAG-------------TGGTGATTT----TCA----G------T---TC-TTTTTGCTGGACTTCTGGGCGCCCATCA-----AGTG-CAATCAGCGTCAGC-TGA-------------------------T------AATATATGTTCC--GTATAATG
droTak1	scf7180000415763:145875-146110 +		----------CAAC-----------ATGACAGCACTGGGATTAGTTTTGCTATCCATGATGGGTAAGTGC---------------------------------------------------CGGGTGTTAGAGAGTC--TTCCTTATCGACATGCCCCTGAGAGT--------------------------------------------ACGATATACGAAATTGG-GG------------------AGATA--GC--GAACCGCCTTATCGCAGTAATG----------GT---------TA-----G-----GT--TTT-TATTTTTTGAATTCCTGAGCGCCCATCA-----ACTG-CAATCAGCGTCAGC-TGAG--CAGTGATAGCCC-----CACGATAATATTAATATAT---------GCACCG
droEug1	scf7180000409797:908817-909028 -		AAGCAAAGAGCAAC-----------ATGACAGCTTTGGGATTAGTTCTGCTATCGATGATGGGTAAGTGC---------------------------------------------------CGGGTGTTAGAGTC--TTTTTCTTATCAACTTGCCCCTGAGAAT--------------------------------------------ATA--------AATTGG-GG------------------AGATA--GTACCACCGGTCTTATCGC-----------------------------------------ATTTTTTGTTTTTGTTAAATTCCTGAGCGCCCATCA-----CCTG-TAATCAACGTCAGCCTGAG--CAGTGATAACCT-----CGCA-----------------------------G
dm3	chr3R:7283118-7283348 -		----------CAAC-----------ATGACAGCACTGGGATTAGTTCTGCTATCGATGATGGGTAAGTGC---------------------------------------------------CGGGTGTTAGGGTGC-TTTTCCTTATCGCCATGCCCCTGAGAACTT------------------------------------------ACC--------AATTGT-GC------------------AGATA--GC--ACC-CG-----------GTATG-GGAA-TGTGGGGCTATAAGATCG----G-----GT----T-TTTTTTTTGAATTCCTGAGCGCCCAGCA-----AGTG-CAATCTGCGTCAGC-TGAGCGCACTGATAGCCC-----AGAGAT------AATATAT---------GCATCG
droSim2	3r:13818208-13818442 +	dsi_15836	----------CAAC-----------ATGACAGCACTGGGATTAGTTCTGCTATCGATGATGGGTGAGTGC---------------------------------------------------CGGGTGTTAGGGAGC-TTTTCCTTATCGCCATGCCCCTGGGAACCA------------------------------------------ACC--------AATTGT-GC------------------AGATA--GC--ACC-CG-----------GAATG-GGAA-TGTGGTGCTATAAGATCG----A-----GTTTTTT-TTTTTTTTGAATTCCTGAGCGCCCAGCA-----AGTG-CAATCTGCGTCAGC-TGAGCGCACTGATAGCCC-----AGAGAT------AATATAT---------GCAGCG
droSec2	scaffold_0:14680328-14680562 +		AAGCA----GCAAC-----------ATGACAGCACTGGGATTAGTTCTGCTATCGATAATGGGTGAGTGC---------------------------------------------------CGGGTGTTAGGGAGC-TTTTCCTTATCGCCATGCCCCTGAGAACCA------------------------------------------ACC--------AATTGT-GC------------------AGATA--AC--ACC-CG-----------GAATG-GGAA-TGTGGTGCTATAAGATCG----A-----GT-------TTTTTTTGAATTCCTGAGCGCCCAGCA-----AGTG-CAATCTGCGTCAGC-CGAGCGCACTGATAGCCC-----AGAGAT------AATATAT---------GCAGCG
droYak3	3R:11317562-11317803 -		AAGCA----GCAAC-----------ATGACAGCACTGGGATTAATTCTGCTATCGATGATGGGTGAGTGC---------------------------------------------------CGGGTGTTAGGGAGTCTTTTCCTTATCGCCAAGGTCCTGAGAAC--------------------------------------------ACT--------AAATGT-GC------------------AGATA--GC--AGC-CG-----------GAATGCGGAA-TGTGGGGCTATTCGATCG----ATTC--GTTTTTT-TTTTTTTTGAATTCCTGAGCGCCAAGCA-----ACTG-CAATCTGCGCCAGC-TGAG--CACTGATAGCCC-----AGAGAT------AATATAT---------GCAGCG
droEre2	scaffold_4770:14337106-14337321 +		CA-------GCAAC-----------ATGACAGCACTGGGATTAGTTCTGCTATCGATGATGGGTGAGTGC----------------------------------------------------GGGTGTTAGGGAGTCTTTTCCTTATCGCCATGCCCCTGAAAAC--------------------------------------------ACT--------AAATGT-TC------------------AGATA--GT--ACC-CG-----------GAATTCGGAA-TGTGGGGCTATTAGAATG------------------GTTTCTTTGAATTCCTGAGCGCCAAGCA-----ACTG-CAATCTGCGTCAGC-TGAG--CACTGATAGCCC-----AGAGAT------AA--------------------

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droPer2

AAGCAGAGA-CAGC-----------ATGACAGCACTGGGATTAGTTTTGCTATCAATGATGGGTAAGTGTGTAAGCGAGACAGCAGTGAGTGGGAGTGAGATTGCGAGTGGGAGTGGAGATCGGGAGACAGTGAGT---GGTCTTATCG-CATGCCCCTGAACATC----------------------------------GCCATAAAA---------------------------------------------C-A---------TGGTCG------------------------------------A-----GAGGGGTC-TTATCGAGGCATTCTGCACATCTATCA---CAGCTG-CAATCAGCGTCAGT-CGAG--CAGGAATATCGT------------------ATATGT---------ACATCG	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
......................................GATTAGTTTTGCTATCAATGATGGGCT...............................................................................................................................................................................................................................................................................................................................................................................	27	1	3.00	3	3	0	0	0	0	0
.............................................TTTGCTATCAATGATGGGCT...............................................................................................................................................................................................................................................................................................................................................................................	20	1	2.00	2	2	0	0	0	0	0
..............................................................................................................................................CTTATCG-CATGCCCCTGAACATC----------------------------------GCC.....................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
......................................GATTAGTTTTGCTATCAATGATGGGCC...............................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0

dp5

AAGCAGAGA-CAGC-----------ATGACAGCACTGGGATTAGTTCTGCTATCAATGATGGGTAAGTGTGTAAGCGAGACAGCAGTGAGTGGGTGTGAGATTGCGAGTGGGAGTGGAGATCGGGAGACAGTGAGT---GGTCTTATCG-CATGCCCCTGAACATC----------------------------------GCCATAAAA---------------------------------------------C-A---------TGGTCG------------------------------------A-----GAGGGGTC-TTATCGAGGCATTCTGCACATCTATCA---CAGCTG-CAATCAGCGTCAGT-CGAG--CAGGAATATCGT------------------ATATGA---------ACATCG	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
.............................CAGCACTGGGATTAGTTCTGCT.............................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	1	0	0	0	0	0
...............................GCACTGGGATTAGTTCTGC..............................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0	0	0	0	0
........................................TTAGTTCTGCTATCAATGATGGGC................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................................ACTGGGATTAGTTCTGCTATC..........................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0	0	0	0	0
.AGCAGAGA-CAGC-----------ATGACAGCACTGG..........................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	1	0	0	0	0	0
........................................TTAGTTCTGCTATCAATGATGGGCT...............................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0
...........................GACAGCACTGGGATTAGTTCTGCTAT...........................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0
.......................................................................................................GCGAGTGGGAGTGGAGACA......................................................................................................................................................................................................................................................................................................................	19	10	0.20	2	0	2	0	0	0	0	0	0	0	0

droWil2

-----------------------------------TGGGATTACTTTTGCTATCAATGATGGGTAAGTGA---------------------------------------------------GAGCTCACAGACAGCCCAGTCCTGCCCACCAACACCCATA--TCTAACCAATAAGCCATATCAGTGCGACCCTGAAAAA---------AAA--------AAC-------------------------GATA--AA--AAC-AA-----------AAATAGGCAACAGTTAGCTTGTTAGAG------AAACGACC---TTC-TTATCAGCGCATTCTGCGCGCCTGTCA-----CCGG-CAATTAAATTCAGT-C-CG--CCCTGAAAG----------AGAT------AAT-TATCTCGTCTGTA-ACTA	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
.................................................CTATCAATGATGGGTAAGTG...........................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1
......................................................................................................................................GCCCAGTCCTGCCCACCAACACCC..................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0
...............................................................................................................................................................................................................................................................................................................................................TCTGCGCGCCTGTCA-----CCGG-........................................................................	19	1	1.00	1	1	0	0	0	0
...................................................ATCAATGATGGGTAAGTGA---------------------------------------------------GAG....................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	1	0
............................................................................................................................................................................................................................................................................................................................................CATTCTGCGCGCCTGTCA-----CCGG-........................................................................	22	1	1.00	1	1	0	0	0	0
..............................................................................................................................................................................................................................................................................................AGTTAGCTTGTTAGAG------AAA.........................................................................................................................	19	1	1.00	1	0	0	1	0	0
.........................................................................................................................................................................................................................................................................................................................ACC---TTC-TTATCAGCGCATTCTG.............................................................................................	22	1	1.00	1	0	1	0	0	0

droVir3

TCGAG----GCAGC-----------AAGGCAGCGAGGC--------------------------------------------------------------------------------------------------------------AGCAAGGCAGCGAGACA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-AAGG--CAGCGA--------------------------------------------G	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
..........................................................................................................................................................................................................................................................CA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-AAGG--...................................................	24	20	1.70	34	0	0	5	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	7	1	5	0	3	3	1	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................CA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------........................................................................	24	20	1.70	34	0	0	5	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	5	3	3	3	1	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................C--------------------------------------------------------------------------------------------------------------AGCAAGGCAGCGAGACA--------------------------------------------GCA--------AGG.................................................................................................................................................................................................................	24	20	1.60	32	0	0	5	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	7	0	5	0	3	3	1	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................CA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--GC--AAG-..........................................................................................................................................................................	23	20	1.60	32	0	0	2	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	3	2	0	5	9	3	0	0	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................CA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--.....................................................................	25	20	1.55	31	0	0	9	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	7	1	0	0	3	0	0	0	0	3	0	0	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................CA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-AAGG--C..................................................	25	20	1.50	30	0	0	9	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	7	0	0	0	3	0	0	0	0	3	0	0	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.....................................C--------------------------------------------------------------------------------------------------------------AGCAAGGCAGCGAGACA--------------------------------------------GCA--------AGGC................................................................................................................................................................................................................	25	20	1.45	29	0	0	9	0	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	0	0	3	0	0	0	0	3	0	0	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.....................................C--------------------------------------------------------------------------------------------------------------AGCAAGGCAGCGAGACA--------------------------------------------G..............................................................................................................................................................................................................................	19	20	1.40	28	0	0	0	0	5	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	13	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................CA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-AAGG--CA.................................................	26	20	1.30	26	0	0	12	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	4	0	0	0	0	1	0	0	0	5	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................C--------------------------------------------------------------------------------------------------------------AGCAAGGCAGCGAGACA--------------------------------------------GCA--------AGGCA...............................................................................................................................................................................................................	26	20	1.25	25	0	0	12	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	4	1	0	0	0	1	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................CA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-AAG......................................................	23	20	1.20	24	0	0	2	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	3	2	0	5	0	3	0	0	2	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................CA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--A....................................................................	26	20	1.20	24	0	0	12	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	4	0	0	0	0	1	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................C--------------------------------------------------------------------------------------------------------------AGCAAGGCAGCGAGACA--------------------------------------------GCA--------AG..................................................................................................................................................................................................................	23	20	1.15	23	0	0	2	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	3	2	0	5	0	3	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................CA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--G.................................................................................................................................................................................	19	20	1.00	20	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	6	0	5	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................CA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--GC--..............................................................................................................................................................................	20	20	0.90	18	0	0	4	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	4	0	0	0	0	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................CA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAG...........................................................	19	20	0.85	17	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	6	0	0	2	0	1	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........CAGC-----------AAGGCAGCGAGGC--------------------------------------------------------------------------------------------------------------AG..........................................................................................................................................................................................................................................................................................	19	18	0.83	15	0	0	1	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	2	4	0	0	1	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........CAGC-----------AAGGCAGCGAGGC--------------------------------------------------------------------------------------------------------------AGC.........................................................................................................................................................................................................................................................................................	20	18	0.78	14	0	0	2	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	0	0	2	0	0	0	1	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................CA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-.........................................................	20	20	0.75	15	0	0	4	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	3	3	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........CAGC-----------AAGGCAGCGAGGC--------------------------------------------------------------------------------------------------------------AGCAAGG.....................................................................................................................................................................................................................................................................................	24	11	0.73	8	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................CA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-A........................................................	21	20	0.70	14	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	5	2	1	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................C--------------------------------------------------------------------------------------------------------------AGCAAGGCAGCGAGACA--------------------------------------------GCA--------....................................................................................................................................................................................................................	21	20	0.65	13	0	0	3	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	5	0	1	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........CAGC-----------AAGGCAGCGAGGC--------------------------------------------------------------------------------------------------------------AGCAAG......................................................................................................................................................................................................................................................................................	23	11	0.64	7	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................CA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--GC--A.............................................................................................................................................................................	21	20	0.55	11	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	5	2	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................CA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AG...................................................................	27	20	0.55	11	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................C--------------------------------------------------------------------------------------------------------------AGCAAGGCAGCGAGACA--------------------------------------------GC.............................................................................................................................................................................................................................	20	20	0.50	10	0	0	0	1	1	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................GACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-AAGG--C..................................................	27	17	0.47	8	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................GACA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--.....................................................................	27	17	0.47	8	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................CAGCGAGACA--------------------------------------------GCA--------AGGCAG-CG------------------AG.......................................................................................................................................................................................	23	20	0.45	9	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	1	0	1	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................C--AGCGAGACAGC-AAGG--CAGCGA--------------------------------------------G	23	20	0.45	9	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	1	0	1	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................CAG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAG...............................................................	23	20	0.45	9	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	1	0	1	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................GACA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------........................................................................	26	17	0.41	7	0	0	4	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................GACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-AAGG--...................................................	26	17	0.41	7	0	0	4	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................C--------------------------------------------------------------------------------------------------------------AGCAAGGCAGCGAGACA--------------------------------------------GCA--------AGGCAG-.............................................................................................................................................................................................................	27	20	0.40	8	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................CAGCGAGGC--------------------------------------------------------------------------------------------------------------AGCAAGGCAGCG................................................................................................................................................................................................................................................................................	21	8	0.38	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................CAGCGAGACA--------------------------------------------GCA--------AGGCAG-CG------------------AGA......................................................................................................................................................................................	24	20	0.35	7	0	0	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................CAG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGA..............................................................	24	20	0.35	7	0	0	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................CA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-AAGG--CAG................................................	27	20	0.35	7	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................CAG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCG.................................................................	21	20	0.30	6	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........CAGC-----------AAGGCAGCGAGGC--------------------------------------------------------------------------------------------------------------AGCAAGGCAG..................................................................................................................................................................................................................................................................................	27	11	0.27	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................CAGCGAGGC--------------------------------------------------------------------------------------------------------------AGCAAGGCAGC.................................................................................................................................................................................................................................................................................	20	11	0.27	3	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........CAGC-----------AAGGCAGCGAGGC--------------------------------------------------------------------------------------------------------------AGCA........................................................................................................................................................................................................................................................................................	21	16	0.25	4	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................C--AGCGAGACAGC-AAGG--CAGCGA--------------------------------------------.	22	20	0.25	5	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................CAGCGAGACA--------------------------------------------GCA--------AGGCAG-CG------------------.........................................................................................................................................................................................	21	20	0.25	5	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................GACA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--GC--..............................................................................................................................................................................	22	20	0.25	5	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................C--AGCGAGACAGC-AAGG--CAGCG..............................................	21	20	0.25	5	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................GACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-.........................................................	22	20	0.25	5	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................GGC--------------------------------------------------------------------------------------------------------------AGCAAGGCAGCGAGACA--------------------------------------------GCA--------AGG.................................................................................................................................................................................................................	26	14	0.21	3	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................CAG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGA................................................................	22	20	0.20	4	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................AG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAG...............................................................	22	20	0.20	4	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................AGCGAGACA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--G.................................................................................................................................................................................	26	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................CAGCGAGACA--------------------------------------------GCA--------AGGCAG-CG------------------AGAC.....................................................................................................................................................................................	25	20	0.20	4	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................AGCGAGACA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--..................................................................................................................................................................................	25	20	0.20	4	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................C--------------------------------------------------------------------------------------------------------------AGCAAGGCAGCGAGACA--------------------------------------------GCA--------A...................................................................................................................................................................................................................	22	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................GACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAG...........................................................	21	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................ACA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--.....................................................................	26	20	0.20	4	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................AG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAG...........................................................	26	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................ACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-AAGG--C..................................................	26	20	0.20	4	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................GACA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--G.................................................................................................................................................................................	21	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................CA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--GC--AA............................................................................................................................................................................	22	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................CA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-AA.......................................................	22	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................CAGCGAGACA--------------------------------------------GCA--------AGGCAG-CG------------------A........................................................................................................................................................................................	22	20	0.20	4	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................AG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACA............................................................	25	20	0.20	4	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........GCAGC-----------AAGGCAGCGAGGC--------------------------------------------------------------------------------------------------------------AGCAAGG.....................................................................................................................................................................................................................................................................................	25	11	0.18	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..GAG----GCAGC-----------AAGGCAGCGAGGC--------------------------------------------------------------------------------------------------------------AGC.........................................................................................................................................................................................................................................................................................	24	12	0.17	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................AGCAAGGCAGCGAGACA--------------------------------------------GCA--------AGGCA...............................................................................................................................................................................................................	25	20	0.15	3	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................CGAGACA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--GC--..............................................................................................................................................................................	25	20	0.15	3	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................CAGCGAGACA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--G.................................................................................................................................................................................	27	20	0.15	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................AGCGAGACAGC-AAGG--CAGCGA--------------------------------------------G	22	20	0.15	3	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-.........................................................	25	20	0.15	3	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................CAG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAG...........................................................	27	20	0.15	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................A--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--A....................................................................	25	20	0.15	3	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................A--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-AAGG--CA.................................................	25	20	0.15	3	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................CAGCGAGGC--------------------------------------------------------------------------------------------------------------AGCAAGGCAGCGAGA.............................................................................................................................................................................................................................................................................	24	7	0.14	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................CAGCGAGGC--------------------------------------------------------------------------------------------------------------AGCAAGGCAGCGA...............................................................................................................................................................................................................................................................................	22	8	0.13	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................GACA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--GC--AAG-..........................................................................................................................................................................	25	17	0.12	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................GACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-AA.......................................................	24	17	0.12	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................GACA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--GC--AA............................................................................................................................................................................	24	17	0.12	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................GACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-AAG......................................................	25	17	0.12	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................C--AGCGAGACAGC-AAGG--CAGC...............................................	20	20	0.10	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................GACA--------------------------------------------GCA--------AGGCAG-CG------------------AGAC.....................................................................................................................................................................................	19	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................CGAGACAGC-AAGG--CAGCGA--------------------------------------------G	20	20	0.10	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................AGCGAGACA--------------------------------------------GCA--------AGGCAG-CG------------------AGA......................................................................................................................................................................................	23	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................AGCAAGGCAGCGAGACA--------------------------------------------GCA--------AGGCAG-.............................................................................................................................................................................................................	26	20	0.10	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................C--------------------------------------------------------------------------------------------------------------AGCAAGGCAGCGAGACA--------------------------------------------...............................................................................................................................................................................................................................	18	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................CAGCGAGACA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--..................................................................................................................................................................................	26	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................GGCAG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGA..............................................................	26	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
...........................................................................................................................................................CAGCGAGACA--------------------------------------------GCA--------AGGCAG-C............................................................................................................................................................................................................	20	20	0.10	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................AG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGA................................................................	21	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................G------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-.........................................................	24	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
...................................................................................................................................................................................................................................CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAG...............................................................	20	20	0.10	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................AG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGA..............................................................	23	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................AGCGAGACAGC-AAGG--CAGCGA--------------------------------------------.	21	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................A--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-AAGG--CAG................................................	26	20	0.10	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................C--------------------------------------------------------------------------------------------------------------AGCAAGGCAGCGAGACA--------------------------------------------GCA--------AGGCAT-.............................................................................................................................................................................................................	27	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................GGCAGCGAGACA--------------------------------------------GCA--------AGGCAG-CG------------------AGA......................................................................................................................................................................................	26	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
...............................................................................................................................................................GAGACA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--GC--..............................................................................................................................................................................	24	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
...............................................................................................................................................................................................................................CAG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGAC.............................................................	25	20	0.10	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................A--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AG...................................................................	26	20	0.10	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................CGAGACA--------------------------------------------GCA--------AGGCAG-CG------------------AG.......................................................................................................................................................................................	20	20	0.10	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................AGCGAGACA--------------------------------------------GCA--------AGGCAG-CG------------------A........................................................................................................................................................................................	21	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................GACA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--GC--A.............................................................................................................................................................................	23	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................AGCGAGACA--------------------------------------------GCA--------AGGCAG-CG------------------AG.......................................................................................................................................................................................	22	20	0.10	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................CAG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGC..................................................................	20	20	0.10	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
TCGAG----GCAGC-----------AAGGCAGCGAGGC--------------------------------------------------------------------------------------------------------------A...........................................................................................................................................................................................................................................................................................	24	11	0.09	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................CAGCGAGGC--------------------------------------------------------------------------------------------------------------AGCAAGGCAG..................................................................................................................................................................................................................................................................................	19	11	0.09	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............GC-----------AAGGCAGCGAGGC--------------------------------------------------------------------------------------------------------------AGCAAGGC....................................................................................................................................................................................................................................................................................	23	11	0.09	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........CAGC-----------AAGGCAGCGAGGC--------------------------------------------------------------------------------------------------------------AGCAAGT.....................................................................................................................................................................................................................................................................................	24	11	0.09	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............GC-----------AAGGCAGCGAGGC--------------------------------------------------------------------------------------------------------------AGCAAGG.....................................................................................................................................................................................................................................................................................	22	11	0.09	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........AGC-----------AAGGCAGCGAGGC--------------------------------------------------------------------------------------------------------------AGCAAGGCA...................................................................................................................................................................................................................................................................................	25	11	0.09	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........CAGC-----------AAGGCAGCGAGGC--------------------------------------------------------------------------------------------------------------AGCAAGGTG...................................................................................................................................................................................................................................................................................	26	11	0.09	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................AGGCAGCGAGGC--------------------------------------------------------------------------------------------------------------AGCAAGGCA...................................................................................................................................................................................................................................................................................	21	11	0.09	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
TCGAG----GCAGC-----------AAGGCAGCGAGGC--------------------------------------------------------------------------------------------------------------............................................................................................................................................................................................................................................................................................	23	11	0.09	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................GGCAGCGAGGC--------------------------------------------------------------------------------------------------------------AGCAAGG.....................................................................................................................................................................................................................................................................................	18	11	0.09	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........AGC-----------AAGGCAGCGAGGC--------------------------------------------------------------------------------------------------------------AGCAAG......................................................................................................................................................................................................................................................................................	22	11	0.09	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........CAGC-----------AAGGCAGCGAGGC--------------------------------------------------------------------------------------------------------------AGCAAGGC....................................................................................................................................................................................................................................................................................	25	11	0.09	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...AG----GCAGC-----------AAGGCAGCGAGGC--------------------------------------------------------------------------------------------------------------AGC.........................................................................................................................................................................................................................................................................................	23	12	0.08	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....G----GCAGC-----------AAGGCAGCGAGGC--------------------------------------------------------------------------------------------------------------............................................................................................................................................................................................................................................................................................	19	13	0.08	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....G----GCAGC-----------AAGGCAGCGAGGC--------------------------------------------------------------------------------------------------------------AGC.........................................................................................................................................................................................................................................................................................	22	13	0.08	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................GGC--------------------------------------------------------------------------------------------------------------AGCAAGGCAGCGAGACA--------------------------------------------GCA--------....................................................................................................................................................................................................................	23	14	0.07	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................GGC--------------------------------------------------------------------------------------------------------------AGCAAGGCAGCGAGACA--------------------------------------------GCA--------AGGCA...............................................................................................................................................................................................................	28	14	0.07	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................AGACA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--GC--AAG-..........................................................................................................................................................................	26	15	0.07	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................CGAGACA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--GC--A.............................................................................................................................................................................	26	15	0.07	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-A........................................................	26	15	0.07	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-AAG......................................................	26	15	0.07	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................GACA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--A....................................................................	28	17	0.06	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................GACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-AAGG--CA.................................................	28	17	0.06	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................GACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-AAGA--...................................................	26	18	0.06	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................GACA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--GC--AAG-A-------------------------------------------------------------------------------------------------........................................................................	26	18	0.06	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
TCGAG----GCAGC-----------AAGGCAGCGA.............................................................................................................................................................................................................................................................................................................................................................................................................	20	18	0.06	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........CAGC-----------AAGGCAGCGAGGC--------------------------------------------------------------------------------------------------------------A...........................................................................................................................................................................................................................................................................................	18	19	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................CA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-AAGG--CAT................................................	27	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................CAGCGAGACA--------------------------------------------GCA--------AGGCAG-.............................................................................................................................................................................................................	19	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................GACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGAC.............................................................	19	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................AGCGAGACA--------------------------------------------GCA--------AGGCAG-CG------------------AGAA.....................................................................................................................................................................................	24	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................CA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-AAT......................................................	23	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................CA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AT...................................................................	27	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................C--AGCGAGACAGC-AAGG--CAGCGA--------------------------------------------A	23	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................AG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGAC.............................................................	24	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................CA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-AATT--...................................................	24	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................ACA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--GC--..............................................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................AGCAAGGCAGCGAGACA--------------------------------------------GCA--------A...................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................AG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-AAGG--CAGCGA--------------------------------------------.	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................AG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-.........................................................	27	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................A--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--GC--AAG-..........................................................................................................................................................................	22	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................CA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--GC--AAG-A-------------------------------------------------------------------------------------------------........................................................................	24	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................CA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--GC--AAT-T-------------------------------------------------------------------------------------------------........................................................................	24	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................GCAG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAG...............................................................	24	20	0.05	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................CA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AA...................................................................	27	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................GACA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--..................................................................................................................................................................................	20	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................AGGCAG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------........................................................................	19	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................CA--------AGGCAG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------........................................................................	21	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................CA--------AGGCAG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGA................................................................	27	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGA..............................................................	19	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................ACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-.........................................................	21	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................GCAGCGAGACA--------------------------------------------GCA--------AGGCAG-CG------------------AGAC.....................................................................................................................................................................................	26	20	0.05	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................CA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--GC--AAT-..........................................................................................................................................................................	23	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................GCAGCGAGACA--------------------------------------------GCA--------AGGCAG-CG------------------AGA......................................................................................................................................................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................CAAGGCAGCGAGACA--------------------------------------------GCA--------AGGC................................................................................................................................................................................................................	22	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................C--------------------------------------------------------------------------------------------------------------AGCAAGGCAGCGAGACA--------------------------------------------GCA--------ATT.................................................................................................................................................................................................................	24	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................AGACA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--GC--..............................................................................................................................................................................	23	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................CGAGACA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--G.................................................................................................................................................................................	24	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................CAGCGAGACA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--A.................................................................................................................................................................................	27	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................G-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-.........................................................	26	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........CAGC-----------AAGGCAGCGAGGC--------------------------------------------------------------------------------------------------------------AGCC........................................................................................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................AG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-AAGG--...................................................	19	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................ACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-A........................................................	22	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-.........................................................	18	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................GCA--------AGGCAG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--.....................................................................	23	20	0.05	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-AAGG--CAC................................................	23	20	0.05	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................G-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAG...........................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................AGCGAGACA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--C.................................................................................................................................................................................	26	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................G-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-AAGG--CAGCC..............................................	23	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................GCGAGACA--------------------------------------------GCA--------AGGCAG-CG------------------AG.......................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................AGCAAGGCAGCGAGACA--------------------------------------------GCA--------AGGC................................................................................................................................................................................................................	24	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................CAG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAA...............................................................	23	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................ACA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--GC--A.............................................................................................................................................................................	22	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................A--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--GC--..............................................................................................................................................................................	19	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................GACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACA............................................................	20	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................A--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-AAG......................................................	22	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................G------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACA............................................................	22	20	0.05	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................C--------------------------------------------------------------------------------------------------------------AGCAAGGCAGCGAGACA--------------------------------------------GCA--------AGA.................................................................................................................................................................................................................	24	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................A--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-AAGG--C..................................................	24	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................AGCAAGGCAGCGAGACA--------------------------------------------GCA--------AG..................................................................................................................................................................................................................	22	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................AGGCAG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGA................................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................GGCAGCGAGACA--------------------------------------------GCA--------AGGCAG-CC------------------.........................................................................................................................................................................................	23	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................GCGAGACA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--G.................................................................................................................................................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................G-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAG...............................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................C--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-AAGG--CAGCGA--------------------------------------------.	27	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................AG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-AAGG--CA.................................................	21	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-AAGG--C..................................................	23	20	0.05	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................GCGAGACAGC-AAGG--CAGCGA--------------------------------------------G	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................A--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-AAGG--...................................................	23	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................CAG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AG...................................................................	19	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................CAAGGCAGCGAGACA--------------------------------------------GCA--------AGG.................................................................................................................................................................................................................	21	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................CAGCGAGACA--------------------------------------------GCA--------AGGCAG-CG------------------AA.......................................................................................................................................................................................	23	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................A--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------........................................................................	23	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................CAGCGAGACA--------------------------------------------GCA--------AGGCA...............................................................................................................................................................................................................	18	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................GCGAGACA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--GC--..............................................................................................................................................................................	26	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................AGGCAGCGAGACA--------------------------------------------GCA--------AGGCAG-CG------------------A........................................................................................................................................................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................A--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--.....................................................................	24	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................C--------------------------------------------------------------------------------------------------------------AGCAAGGCAGCGAGACA--------------------------------------------GCA--------AT..................................................................................................................................................................................................................	23	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................GCGAGACA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--..................................................................................................................................................................................	24	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................C--------------------------------------------------------------------------------------------------------------AGCAAGGCAGCGAGACA--------------------------------------------GCA--------AGGCAA-.............................................................................................................................................................................................................	27	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................GACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-A........................................................	23	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................C--AGCGAGACAGC-AAGG--CAG................................................	19	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................AG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGAA.............................................................	24	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................AGCGAGACA--------------------------------------------GCA--------AGGCAG-CG------------------AGAC.....................................................................................................................................................................................	24	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-AAGG--CAG................................................	23	20	0.05	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................CAGCGAGGC--------------------------------------------------------------------------------------------------------------AGCAAGGTC...................................................................................................................................................................................................................................................................................	18	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................GC--------------------------------------------------------------------------------------------------------------AGCAAGGCAGCGAGACA--------------------------------------------G..............................................................................................................................................................................................................................	20	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................G-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACA............................................................	24	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................CAGCGAGACA--------------------------------------------GCA--------AGGCAG-CG------------------AGAT.....................................................................................................................................................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................GACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-ATT......................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................AGCGAGACA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--GC--..............................................................................................................................................................................	27	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................CA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-AAGG--CAA................................................	27	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................CA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--..................................................................................................................................................................................	18	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-.........................................................	23	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................AGCAAGGCAGCGAGACA--------------------------------------------GC.............................................................................................................................................................................................................................	19	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................A--------AGGCAG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AG...................................................................	23	20	0.05	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................GCA--------AGGCAG-CG------------------AGACA--GC--..............................................................................................................................................................................	18	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................AG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAC...........................................................	26	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................A--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-AA.......................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................CAG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGAT.............................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................ACA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------........................................................................	25	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................C--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-AAGG--...................................................	21	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAG...........................................................	24	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................CAAGGCAGCGAGACA--------------------------------------------GCA--------AGGCAG-CG------------------A........................................................................................................................................................................................	27	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................C--AGCGAGACAGC-AAGG--CA.................................................	18	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................ACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-AAGG--...................................................	25	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................CA--------AGGCAG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--.....................................................................	22	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................AGGCAGCGAGACA--------------------------------------------GCA--------AGGCA...............................................................................................................................................................................................................	21	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................CAG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--A....................................................................	18	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................AGGCAG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--A....................................................................	21	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................GAGACA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--..................................................................................................................................................................................	22	20	0.05	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................GGCAG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCC.................................................................	23	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................AGCAAGGCAGCGAGACA--------------------------------------------GCA--------AGG.................................................................................................................................................................................................................	23	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................AAGGCAGCGAGACA--------------------------------------------GCA--------AGGCAG-.............................................................................................................................................................................................................	23	20	0.05	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................CA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACAGC-AAGA--...................................................	24	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................CAG-CG------------------AGACA--GC--AAG-G-------------------------------------------------------------------------------------------------C--AGCGAGACA............................................................	26	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................A--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--GC--AA............................................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................GCAAGGCAGCGAGACA--------------------------------------------GCA--------AGGC................................................................................................................................................................................................................	23	20	0.05	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................GACA--------------------------------------------GCA--------AGGCAG-CG------------------AGACA--GC--ATT-..........................................................................................................................................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

----------CAGT-----------ATGACAGCACTTGGATTACTTTTGCTATCTATGATGGGTAAGTGT---------------------------------------------------G----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
No Reads

droGri2

-----------AGT-----------ATGACAGCACTTGGATTACTTTTGCTATCAATGATGGGTAAGTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

droAna3

ATATCAAGA-CATC-----------ATGACTGCCCTGGGATTAGTTTTGCTATCAATGATGGGTAAGTTA-------------------------------TTT-----------------CGAGTGCCGGTGAATA--CTTGTTATCGGA-G--------------------------------------------------------------------------GAGGGCGGCGGAATGCTGATAGCTCCTG-CTCACCTGCCTTATCGAGG--------------GGG----------------------------GC-TGCTCTTTGGTTTCTGGGCGCCCATCC---G-CTCGTCAATC-GCGTCAGC-TGGG--CCCTGATAATCC-----AT--------------------------ATATTA	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
..........CATC-----------ATGACTGCCCTGGGATT......................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0
...................................................................................................................................................................................................................................................................................................G----------------------------GC-TGCTCTTTGGTTTCTGGG...........................................................................................	21	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................................................................................................................................TGATAGCTCCTG-CTCACCTGC.......................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0

droBip1

AG------A-CATC-----------ATGACAGCACTGGGATTAGTTTTGCTATCAATGATGGGTAAGTTA-------------------------------TTT-----------------CGAGGGCCG------------GTTATCGGG-----------AGT--------------------------------------------GGA--------GAATGC-----------------TGATAGCTT----CTCACCTGCCTTATCGG-----------------------------------------CAGGGGGC-TGTTCTTTAATTTCTGGGCGCCCATTC---G-CTTGTCAAT-CGCGTCAGC-TGGG--CCCTGATAATAT-----TATAA--------GTATA--------ATATAATA	Size	Hit Count	Total Norm	Total
No Reads

droKik1

----------CAAC-----------ATGACAGCATTGGGATTAGTTCTGCTATCAATGATGGGTAAGTGT---------------------------------------------------CGTGTGCTCGAGAGGC-TTTCCTTATCGAG-----------TCT--------------------------------------------GCC------A-AATTGGAGA------------------AGATA--TC--ACA-C---------------------------------------CT----------------GC-TCCTCTACAATTTCTGCTCGCCCGTCCGTCCACCTG-CAATCAGTGTCCGC-TGAG--CCCTGACAGCTG-----TTATAT-------ACATAT---------TTAATA	Size	Hit Count	Total Norm	Total
No Reads

droFic1

CATTA----GCAACAACATAACGAAATGACGGCACTGGGATTAGTTTTGCTAACAATGATGGGTAAGTTC---------------------------------------------------AGGGTGTTGGGAAGAC--TTTCTTATCGCATTGCCCCTGAAATT--------------------------------------------GTA--------AACCCA-GG------------------AGATA--TT--AA--AGTCTTATCAGGGGA-----------------------ATCGGTTTG------A---TT-TTAAAATAAAATTTCTGGGCGCCCATCA-----ACTG-CAATCAGCGTCAGT-TGAG--CACTGATAGCCACACACAGTAAT---G--TATATAT---------GCAACG	Size	Hit Count	Total Norm	Total
No Reads

droEle1

----------CAAC-----------ATGACAGCACTGGGATTAGTTTTGCTATCAATGATGGGTAAGTGG---------------------------------------------------CGGGTGTTAGAGAGCC--TTTGTTATCGACATGCCCCTGGGAAT--------------------------------------------GTG--------AATCGG-AT------------------AGATA--GC--AAG-CCTCTTATCGGGGGT----------ATGGG---------TCG----G------T---TC-TTTTTTTTTAACTTCTGCGCTCCCAACA-----CCTG-CAATCAGCGTCAGC-TGAG--CACTGATAACCC-----CCCGAT------TATATAT---------GCAACG	Size	Hit Count	Total Norm	Total
No Reads

droRho1

----------CAAC-----------ATGACAGCACTGGGATTAGTTCTGCTATCAATGATGGGTAAGTGG---------------------------------------------------CGAGTGTTAGAGAGGC--CTTCTTATCGACAAGCCCCTGGGAAT--------------------------------------------GTG--------CCTCTG-AT------------------AGATA--GC--ACA-CGCCTTATCGCGG---------------------------------------------------TTTTTAATTTCTGCGCGCCCATCA-----CCTG-CAATCAGCGTCAGC-TGAG--CACTGATAGCCT-----GACACT------AATATAT---------GCATCG	Size	Hit Count	Total Norm	Total
No Reads

droBia1

----------CAAC-----------ATGACGGCACTGGGATTAGTTTTGCTATCCATGATGGGTAAGTGG---------------------------------------------------CGGGCTTTTGGGGCT-TGCTTCTTATCGACATGCCCCTGAGAGC--------------------------------------------ACC------AAAATTGA-CT------------------AGATA--C-ACGAGCCGCCTTATCGCAG-------------TGGTGATTT----TCA----G------T---TC-TTTTTGCTGGACTTCTGGGCGCCCATCA-----AGTG-CAATCAGCGTCAGC-TGA-------------------------T------AATATATGTTCC--GTATAATG	Size	Hit Count	Total Norm	Total
No Reads

droTak1

----------CAAC-----------ATGACAGCACTGGGATTAGTTTTGCTATCCATGATGGGTAAGTGC---------------------------------------------------CGGGTGTTAGAGAGTC--TTCCTTATCGACATGCCCCTGAGAGT--------------------------------------------ACGATATACGAAATTGG-GG------------------AGATA--GC--GAACCGCCTTATCGCAGTAATG----------GT---------TA-----G-----GT--TTT-TATTTTTTGAATTCCTGAGCGCCCATCA-----ACTG-CAATCAGCGTCAGC-TGAG--CAGTGATAGCCC-----CACGATAATATTAATATAT---------GCACCG	Size	Hit Count	Total Norm	Total
No Reads

droEug1

AAGCAAAGAGCAAC-----------ATGACAGCTTTGGGATTAGTTCTGCTATCGATGATGGGTAAGTGC---------------------------------------------------CGGGTGTTAGAGTC--TTTTTCTTATCAACTTGCCCCTGAGAAT--------------------------------------------ATA--------AATTGG-GG------------------AGATA--GTACCACCGGTCTTATCGC-----------------------------------------ATTTTTTGTTTTTGTTAAATTCCTGAGCGCCCATCA-----CCTG-TAATCAACGTCAGCCTGAG--CAGTGATAACCT-----CGCA-----------------------------G	Size	Hit Count	Total Norm	Total
No Reads

dm3

----------CAAC-----------ATGACAGCACTGGGATTAGTTCTGCTATCGATGATGGGTAAGTGC---------------------------------------------------CGGGTGTTAGGGTGC-TTTTCCTTATCGCCATGCCCCTGAGAACTT------------------------------------------ACC--------AATTGT-GC------------------AGATA--GC--ACC-CG-----------GTATG-GGAA-TGTGGGGCTATAAGATCG----G-----GT----T-TTTTTTTTGAATTCCTGAGCGCCCAGCA-----AGTG-CAATCTGCGTCAGC-TGAGCGCACTGATAGCCC-----AGAGAT------AATATAT---------GCATCG	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
..............................................................................................................................................CTTATCGCCATGCCCCTGAG..............................................................................................................................................................................................................................................................................	20	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................TT------------------------------------------ACC--------AATTGT-GC------------------AGATA--GC--AA............................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................TA--GC--ACC-CG-----------GTATG-GGAA-TGTG..............................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............AC-----------ATGACAGCACTGGGATTAGTTCT................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................TAAGTGC---------------------------------------------------CGGGTGTTAGGGTG.........................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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...............................................................TAAGTGC---------------------------------------------------CGGGTGTTAGGGT..........................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................TTTCCTTATCGCCATGCCCCT.................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................TCCTGAGCGCCCAGCA-----AGTG-CAA.....................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................GAATTCCTGAGCGCCCAGCA-----AGTG-CAAT....................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................TGTGGGGCTATAAGATCG----G-----GT----T-TT............................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................AAGTGC---------------------------------------------------CGGGTGTTAGGGTGC-.......................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................GAA-TGTGGGGCTATAAGATCG----G-----G.....................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSim2

----------CAAC-----------ATGACAGCACTGGGATTAGTTCTGCTATCGATGATGGGTGAGTGC---------------------------------------------------CGGGTGTTAGGGAGC-TTTTCCTTATCGCCATGCCCCTGGGAACCA------------------------------------------ACC--------AATTGT-GC------------------AGATA--GC--ACC-CG-----------GAATG-GGAA-TGTGGTGCTATAAGATCG----A-----GTTTTTT-TTTTTTTTGAATTCCTGAGCGCCCAGCA-----AGTG-CAATCTGCGTCAGC-TGAGCGCACTGATAGCCC-----AGAGAT------AATATAT---------GCAGCG	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
...............................................................................................................................................................................................................................................................................................................................TT-TTTTTTTTGAATTCCTGAGC..........................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................GATGATGGGTGAGTG...........................................................................................................................................................................................................................................................................................................................................................................	15	20	0.15	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0

droSec2

AAGCA----GCAAC-----------ATGACAGCACTGGGATTAGTTCTGCTATCGATAATGGGTGAGTGC---------------------------------------------------CGGGTGTTAGGGAGC-TTTTCCTTATCGCCATGCCCCTGAGAACCA------------------------------------------ACC--------AATTGT-GC------------------AGATA--AC--ACC-CG-----------GAATG-GGAA-TGTGGTGCTATAAGATCG----A-----GT-------TTTTTTTGAATTCCTGAGCGCCCAGCA-----AGTG-CAATCTGCGTCAGC-CGAGCGCACTGATAGCCC-----AGAGAT------AATATAT---------GCAGCG	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
.............................................................................................................................................................................................................................................................................................................................................................A-----AGTG-CAATCTGCGTCAGC-CG.......................................................	21	1	2.00	2	0	2	0	0
............AC-----------ATGACAGCACTGGGATTAGTTCTGC..............................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	1	0
..........................................................................................................................................................................................................................................................................................................................GT-------TTTTTTTGAATTCCTGAGC..........................................................................................	21	1	1.00	1	0	0	1	0
...........AAC-----------ATGACAGCACTGGGATT......................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0
...............................GCACTGGGATTAGTTCTG...............................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0
.......................................ATTAGTTCTGCTATCGATAATGGGCT...............................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	1	0
.................................ACTGGGATTAGTTCTGCTATCG.........................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0
.......................................................................................................................................................................................................................................................AGATA--AC--ACC-CG-----------GAATG-GGAA-TGTGGT............................................................................................................................................	27	1	1.00	1	0	0	1	0
.............................CAGCACTGGGATTAGTTCTGCT.............................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0
..........................................AGTTCTGCTATCGATAATGGG.................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0
................................CACTGGGATTAGTTCTGC..............................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0
..........................................AGTTCTGCTATCGATAATGGGTGA..............................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0
...............................GCACTGGGATTAGTTCTGCTATC..........................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0
.........GCAAC-----------ATGACAGCACTGGG.........................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0
.............................CAGCACTGGGATTAGTTC.................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0
...........................................................................................................................................TTCCTTATCGCCATGCCCCTGAGA.............................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	1	0
....A----GCAAC-----------ATGACAGCACTGGGA........................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0

droYak3

AAGCA----GCAAC-----------ATGACAGCACTGGGATTAATTCTGCTATCGATGATGGGTGAGTGC---------------------------------------------------CGGGTGTTAGGGAGTCTTTTCCTTATCGCCAAGGTCCTGAGAAC--------------------------------------------ACT--------AAATGT-GC------------------AGATA--GC--AGC-CG-----------GAATGCGGAA-TGTGGGGCTATTCGATCG----ATTC--GTTTTTT-TTTTTTTTGAATTCCTGAGCGCCAAGCA-----ACTG-CAATCTGCGCCAGC-TGAG--CACTGATAGCCC-----AGAGAT------AATATAT---------GCAGCG	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
......................................GATTAATTCTGCTATCGATGATGGGCT...............................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...........AAC-----------ATGACAGCACTGGGATT......................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...................................................ATCGATGATGGGTGAGTGC---------------------------------------------------CGGGTGTTA..............................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..............................................................GTGAGTGC---------------------------------------------------CGGGTGTTAGGGAG.........................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.........................................................................................................................................................................................................................................................ATA--GC--AGC-CG-----------GAATGCGGAA-T.................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................GCCAAGCA-----ACTG-CAATCTGCGCCA............................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...........................GACAGCACTGGGATTAATTCTGC..............................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................TT-TTTTTTTTGAATTCCTGAGC..........................................................................................	22	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
................................CACTGGGATTAATTCTGCT.............................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
..............................AGCACTGGGATTAATTCTGCT.............................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.......................................ATTAATTCTGCTATCGATGATGGGTGAG.............................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...............................GCACTGGGATTAATTCTGCT.............................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0

droEre2

CA-------GCAAC-----------ATGACAGCACTGGGATTAGTTCTGCTATCGATGATGGGTGAGTGC----------------------------------------------------GGGTGTTAGGGAGTCTTTTCCTTATCGCCATGCCCCTGAAAAC--------------------------------------------ACT--------AAATGT-TC------------------AGATA--GT--ACC-CG-----------GAATTCGGAA-TGTGGGGCTATTAGAATG------------------GTTTCTTTGAATTCCTGAGCGCCAAGCA-----ACTG-CAATCTGCGTCAGC-TGAG--CACTGATAGCCC-----AGAGAT------AA--------------------	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
.A-------GCAAC-----------ATGACAGCACTGGGATTA.....................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	1	0	0
...........................GACAGCACTGGGATTAGTT..................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0	0
..............................AGCACTGGGATTAGTTCTGCT.............................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	1	0
.................................ACTGGGATTAGTTCTGCTAT...........................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1	0
................................CACTGGGATTAGTTCTGC..............................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0	0	0	0
..............................................................GTGAGTGC----------------------------------------------------GGGTGTTAGGGA..........................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1	0	0
.........................ATGACAGCACTGGGATTAGTTC.................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	1	0	0
...............................................................TGAGTGC----------------------------------------------------GGGTGTTAGGG...........................................................................................................................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0	0
...............................GCACTGGGATTAGTTCTGCTATCGAT.......................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	1	0	0
...........AAC-----------ATGACAGCACTGGGATTAGTTC.................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	1	0	0
...........AAC-----------ATGACAGCACTGGGATTAGC...................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0
............AC-----------ATGACAGCACTGGGATTAGTT..................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	1	0	0
...........AAC-----------ATGACAGCACTGGGATTA.....................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0	0
...........................................GTTCTGCTATCGATGATGGGCT...............................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	1	0	0
.........................ATGACAGCACTGGGATTAGTT..................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0	0
.........GCAAC-----------ATGACAGCACTGGGATTAGTTC.................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	1	0
.A-------GCAAC-----------ATGACAGCACTGGGAT.......................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0
....................................GGGATTAGTTCTGCTATCGATGAT....................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	1	0	0

dpe_1875

scaffold_6:906829-906979 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-36.3	-36.2	-36.1