ID:

dpe_1858

 Coordinate:

scaffold_58:408762-408912 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.1 -6.8

Flybase annnotation

exon [dper_GLEANR_20506:2]; CDS [Dper\GL18410-cds]; intron [Dper\GL18410-in]

No Repeatable elements found

mature
star
  1. scaffold_1190:4067-4086 +
  2. scaffold_1190:7635-7654 +
  3. dpe_1858  scaffold_58:408829-408848 -
  4. scaffold_254:1461-1480 +
  5. scaffold_254:9159-9178 +
  6. scaffold_254:11472-11491 +
  7. scaffold_254:19133-19152 +
  8. scaffold_969:3082-3101 +
  9. scaffold_2640:2372-2391 +
  10. scaffold_2884:1788-1807 +
  11. scaffold_689:627-646 +
  12. scaffold_846:1268-1287 -
  13. scaffold_3983:2236-2255 +
  14. scaffold_4138:200-219 -
  15. scaffold_6230:594-613 +
  16. scaffold_5789:985-1004 -
  17. scaffold_6354:880-899 +
  18. scaffold_5967:241-260 -
  19. scaffold_6073:1206-1225 +
  20. scaffold_9180:845-864 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ATTTCCAAATGTAAAAAAACGCACGTTGTTGCCAGAGAGTCTTGATTTCTTGTAATGTAAAGTTTCTTATCCATCTCTATGTAACATTATGTAAAATGTCCCAACCATGTATAATTAGTGGTTCAGCTGTTAAAATAACAGCCGTTAAAAATATTTGTAAATGCGTTAAAATGTAAAAACTGCGAAAACAAATAAAATTAGCTGAGGGTCACTGTGGCCAATCAGTCCTATTGTGCTCGCGCCGTCAACAC
******************************************************************************************************************...........(((((((...)))))))...............................****************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V042
embryo
 V057
head
..........................TGTTGCCAGAGAGTCTTGATTTCTTGT...................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0
...............................................TCTTGTAATGTAAAGTTTCTTATCCATC................................................................................................................................................................................ 28 0 1 1.00 1 1 0 0 0
.........................TTGTTGCCAGAGAGTCTTGATTTCTTG....................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0
...................................AGAGTCTTGATTTCTTGTAATGT................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0
............................................................................................................................................................................................................................ATCAGTCCTATTGTGCTCGCGCCGTCA.... 27 0 1 1.00 1 1 0 0 0
............................................................................................................................................................................................................................ATCAGTCCTATTGTGCTCGCGCCGGTA.... 27 2 1 1.00 1 1 0 0 0
.....................................AGTCTTGATTTCTTGTAATG.................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0
.................AACGCACGTTGTTGCCAGAGAGTCT................................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0
.................AACGCACGTTGTTGCCAGA....................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0
.................................................................................................................................................TAAAAATATTTGTAAATGCGTTAAAATG.............................................................................. 28 0 1 1.00 1 1 0 0 0
............................................................................................................................................................................................................................ATCAGTCCTATTGTGCTCGCGCC........ 23 0 15 0.40 6 5 1 0 0
............................................................................................................................................................................................................................ATCAGTCCTATTGTGCTCGCGCCG....... 24 0 15 0.27 4 4 0 0 0
............................................................................................................................................................................................................................ATCAGTCCTATTGTGCTCGCGC......... 22 0 16 0.19 3 3 0 0 0
...........................................................................................................................................................................................................................AATCAGTCCTATTGTGCTCGC........... 21 0 7 0.14 1 1 0 0 0
............................................................................................................................................................................................................................ATCAGTCCTATTGTGCTCGCGCCGTC..... 26 0 15 0.13 2 2 0 0 0
............................................................................................................................................................................................................................ATCAGTCCTATTGTGCTCGCCCC........ 23 1 15 0.07 1 1 0 0 0
.............................................................................................................................................................................................................................TCAGTCCTATTGTGCTCGCGCC........ 22 0 15 0.07 1 1 0 0 0
............................................................................................................................................................................................................................ATCAGTCCTATTGTGCTCGCGCCGT...... 25 0 15 0.07 1 1 0 0 0
............................................................................................................................................................................................................................ATCAGTCCGATTGTGCTCGCGCCG....... 24 1 15 0.07 1 1 0 0 0
............................................................................................................................................................................................................................ATCAGTCCTATTGTGCTCGCG.......... 21 0 16 0.06 1 0 0 1 0
..................................................................................................................TTAGTGGTTCAGCTGTTAAA..................................................................................................................... 20 0 20 0.05 1 1 0 0 0
..............................................................................................................................................................................................AATAAAATTAGCTGAGGGTCACTGT.................................... 25 0 20 0.05 1 1 0 0 0
......................................GTCTTGATTTCTTGTAATGTA................................................................................................................................................................................................ 21 0 20 0.05 1 1 0 0 0
....................................................................................................................................................................................TGCGAAAACAAATAAAAT..................................................... 18 0 20 0.05 1 1 0 0 0
.....................................................................................................................................................................................GCGAAAACAAATAAAATTAGCTGAGG............................................ 26 0 20 0.05 1 1 0 0 0
..................................................................................................................................................................................................AAATTAGCTGAGGGTCACTG..................................... 20 0 20 0.05 1 1 0 0 0
....................................................................................................................................................................................TGCGAAAAGAAATAAAATTAGCTGAG............................................. 26 1 20 0.05 1 1 0 0 0
.................................................................................................................................................................................................AAAATTAGCTGAGGGTCACT...................................... 20 0 20 0.05 1 1 0 0 0
..................GCGCACGTTATTGCCAGATA..................................................................................................................................................................................................................... 20 3 20 0.05 1 0 0 0 1

Anti-sense strand reads

TAAAGGTTTACATTTTTTTGCGTGCAACAACGGTCTCTCAGAACTAAAGAACATTACATTTCAAAGAATAGGTAGAGATACATTGTAATACATTTTACAGGGTTGGTACATATTAATCACCAAGTCGACAATTTTATTGTCGGCAATTTTTATAAACATTTACGCAATTTTACATTTTTGACGCTTTTGTTTATTTTAATCGACTCCCAGTGACACCGGTTAGTCAGGATAACACGAGCGCGGCAGTTGTG
******************************************************************************...........(((((((...)))))))...............................****************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V111
male body		 V057
head
 V042
embryo
 V050
head
..................TGCGTGCAACAACGGTCTCTCAGAACT.............................................................................................................................................................................................................. 27 0 1 6.00 6 1 5 0 0 0 0
.............................................................................................................................................................................................................CCCAGTGACACCGGTTAGTCAGGAT..................... 25 0 20 5.95 119 118 0 0 0 0 1
.................TTGCGTGCAACAACGGTCTCTCAGAACT.............................................................................................................................................................................................................. 28 0 1 4.00 4 4 0 0 0 0 0
...................GCGTGCAACAACGGTCTCTCAGAACT.............................................................................................................................................................................................................. 26 0 1 3.00 3 3 0 0 0 0 0
....................CGTGCAACAACGGTCTCTCAGAACT.............................................................................................................................................................................................................. 25 0 1 3.00 3 3 0 0 0 0 0
...................GCGTGCAACAACGGTCTCTCAGAAC............................................................................................................................................................................................................... 25 0 1 2.00 2 2 0 0 0 0 0
..................................CTCTCAGAACTAAAGAACATTACAT................................................................................................................................................................................................ 25 0 1 2.00 2 2 0 0 0 0 0
...................GCGTGCAACAACGGTCTGTCAGAACT.............................................................................................................................................................................................................. 26 1 1 1.00 1 1 0 0 0 0 0
............................................................................................................................................CGGCAATTTTTATAAACATTTACGCAAT................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
..................GGCGTGCAACAACGGTCTCTCAGAACT.............................................................................................................................................................................................................. 27 1 1 1.00 1 0 1 0 0 0 0
...........................................................TTCAAAGAATAGGTAGAGATACAT........................................................................................................................................................................ 24 0 1 1.00 1 0 0 1 0 0 0
................................................................................................................................................................................................................................CAGGATAACACGAGCGCGGCAGTT... 24 0 1 1.00 1 1 0 0 0 0 0
......................TGCAACAACGGTCTCTCAGAACT.............................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0
.....................GTGCAACAACGGTCTCTCAGAACT.............................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................................ATATTAATCACCAAGTCGACAATTTT.................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................TAATCACCAAGTCGACAATTTTATTGT............................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0
.....................GTGCAACAACGGTCTCTCAGAAC............................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
...............................GGTCTCTCAGAACTAAAGAAC....................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................................................................................................CCCAGTGACACCGGTTAGTCAGGA...................... 24 0 20 0.70 14 14 0 0 0 0 0
.............................................................................................................................................................................................................CCCAGTGACACCGGTTGGTCAGGAT..................... 25 1 20 0.50 10 10 0 0 0 0 0
............................................................................................................................................................................................................TCCCAGTGACACCGGTTAGTCAGGAT..................... 26 0 20 0.35 7 5 2 0 0 0 0
.........................................................................................................................................................................................................................GGTTAGTCAGGATAACACGAGCGC.......... 24 0 7 0.29 2 2 0 0 0 0 0
............................................................................................................................................CGGCAATTTTTATAAACATTT.......................................................................................... 21 0 8 0.25 2 0 2 0 0 0 0
................................................................................................................................................................................TTTGACGCTTTTGTTTATTTTAAT................................................... 24 0 4 0.25 1 1 0 0 0 0 0
....................................................................................................................................TTTATTGTCGGCAATTTTTATAAACAT............................................................................................ 27 0 8 0.25 2 2 0 0 0 0 0
......................TGCAGCAACGGTCTGTCAGAAT............................................................................................................................................................................................................... 22 3 4 0.25 1 0 0 0 1 0 0
..............................................................................................................................................................................................................CCAGTGACACCGGTTAGTCAGGAT..................... 24 0 20 0.15 3 0 2 1 0 0 0
........................................................................................................................................................................TTTACATTTTTGACGCTTTTGT............................................................. 22 0 20 0.15 3 3 0 0 0 0 0
......................................................................................................................................................................................................................ACCGGTTAGTCAGGATAACACGAGC............ 25 0 7 0.14 1 1 0 0 0 0 0
.........................................................................................................................................................................................................................GGTTAGTCAGGATAACACGAGCGCGG........ 26 0 7 0.14 1 0 0 1 0 0 0
......................................................................................................................................................................................................................ACCGGTTAGTCAGGATAACACGAGCG........... 26 0 7 0.14 1 1 0 0 0 0 0
..........................................................................................................................................................................................................................GTTAGTCAGGATAACACGAGCGCG......... 24 0 7 0.14 1 0 0 1 0 0 0
......................................................................................................................................................................................................................ACCGGTTAGTCAGGATAACACGAGCGCG......... 28 0 7 0.14 1 0 0 1 0 0 0
..........................................................................................................................................................................................................................GTTAGTCAGGATAACACGAGCGCGGC....... 26 0 7 0.14 1 0 0 1 0 0 0
.......................................................................................................................................................................................................................CCGGTTAGTCAGGATAACACGAGCGC.......... 26 0 7 0.14 1 1 0 0 0 0 0
.........................................................................................................................................................................................................................GGTTAGTCAGGATAACACGAGC............ 22 0 7 0.14 1 0 0 1 0 0 0
............................................................................................................................................CGGCAATTTTTATAAACATT........................................................................................... 20 0 8 0.13 1 1 0 0 0 0 0
....................................................................................................................................TTTATTGTCGGCAATTTTGATAAACAT............................................................................................ 27 1 8 0.13 1 1 0 0 0 0 0
.....................................................................................................................................TTATTGTCGGCAATTTTTAT.................................................................................................. 20 0 8 0.13 1 1 0 0 0 0 0
.............................................................................................................................................GGCAATTTTTATAAACATTTA......................................................................................... 21 0 8 0.13 1 1 0 0 0 0 0
.....................................................................................................................................TTATTGTCGGCAATTTTTATAAACATT........................................................................................... 27 0 8 0.13 1 1 0 0 0 0 0
.......................................................................................................................................ATTGTCGGCAATTTTTATAAACA............................................................................................. 23 0 8 0.13 1 1 0 0 0 0 0
....................................................................................................................................TTTATTGTCGGCAATTTTTATAAACATT........................................................................................... 28 0 8 0.13 1 1 0 0 0 0 0
.............................................................................................................................................................................................................CCCAGTGACACCGGTTCGTCAGGAT..................... 25 1 20 0.10 2 2 0 0 0 0 0
.............................................................................................................................................................................................................CGCAGTGACACCGGTTAGTCAGGAT..................... 25 1 20 0.10 2 2 0 0 0 0 0
...................................................................................................................................................................GCAATTTTACATTTTTGACGCTTTTGT............................................................. 27 0 20 0.10 2 2 0 0 0 0 0
................................................................................................................................................................................................................AGTGACACCGGTTAGTCAGGAT..................... 22 0 20 0.10 2 2 0 0 0 0 0
...............................................................................................................................................................................................................CAGTGACACCGGTTAGTCAGGAT..................... 23 0 20 0.10 2 2 0 0 0 0 0
..................................................................................................AGGGTTGGTTCATTTTAA....................................................................................................................................... 18 2 15 0.07 1 0 0 0 0 1 0
............................................................................................................................................................................................................................TAGTCAGGATAACACGAGCGCGGC....... 24 0 15 0.07 1 0 1 0 0 0 0
............................................................................................................................................................................................................................TAGTCAGGATAACACGAGCGCGGCAG..... 26 0 15 0.07 1 0 1 0 0 0 0
.......................GCAGCAACGGTCTGCCAGAAC............................................................................................................................................................................................................... 21 3 16 0.06 1 0 0 0 1 0 0
............................................................................................................................................................................................................................TAGTCAGGATAACACGAGCGC.......... 21 0 16 0.06 1 1 0 0 0 0 0
..............................................................................................................................................................................................................................GTCAGGATAACACGAGCGC.......... 19 0 16 0.06 1 0 0 1 0 0 0
....................................................................................................................................................................CAATTTTACATTTTTGACGCTTTTGT............................................................. 26 0 20 0.05 1 1 0 0 0 0 0
.............................................................................................................................................................................................................CCCAGTGACACCGGTTAGTCAGG....................... 23 0 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................................................................................ATCGACTCCCAGTGACACCGGTTAGT........................... 26 0 20 0.05 1 1 0 0 0 0 0
...............................................................................................................................ACAATTTGATTGTCGGTAC......................................................................................................... 19 3 20 0.05 1 0 0 0 1 0 0
.......................................................................................ATACATTTTACAGGGTTGGT................................................................................................................................................ 20 0 20 0.05 1 1 0 0 0 0 0
.............................................................................................................................................................................................................CCCAGTGACACCGGTTAGTCAGGATCGT.................. 28 3 20 0.05 1 1 0 0 0 0 0
..................................................................................................................................................................................................TTTAATCGACTCCCAGTGACACCGGT............................... 26 0 20 0.05 1 1 0 0 0 0 0
.............................................................................................................................................................................................................CCCAGTGACACCGGTTAGTCAGGAG..................... 25 1 20 0.05 1 1 0 0 0 0 0
.....................................................................................................................................................................AATTTTACATTTTTGACGCTTTTGT............................................................. 25 0 20 0.05 1 1 0 0 0 0 0
..................................................................................................................................................................................................................TGCCACCGGTTAGTCAGGAT..................... 20 1 20 0.05 1 0 0 1 0 0 0
..............................................................................................................................................................................................................CCAGTGACACCGGTTAGTCAGGA...................... 23 0 20 0.05 1 1 0 0 0 0 0
..................................................................................................................................................................CGCAATTTTACATTTTTGACGCTTTTG.............................................................. 27 0 20 0.05 1 1 0 0 0 0 0
.................................................................................................................................................................................................................GTGACACCGGTTCGTCAGGAT..................... 21 1 20 0.05 1 1 0 0 0 0 0
..................................CTCGCAGAACTAAAGAACATTACAT................................................................................................................................................................................................ 25 1 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................................................................................................CTCCCAGTGACACCGGTTAGTCAGGAT..................... 27 0 20 0.05 1 1 0 0 0 0 0
.............................................................................................................................................................................................................CCCAGTGACACCGGTTAGTCAGGATA.................... 26 0 20 0.05 1 1 0 0 0 0 0
.....................................................................................................................................................................................CGCTTTTGTTTATTTTAATC.................................................. 20 0 20 0.05 1 1 0 0 0 0 0
....................................................................................................................................................................................................................ACACCGGTTAGTCAGGAT..................... 18 0 20 0.05 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_58:408712-408962 - dpe_1858 ATTTCCAAATGTAAAAAAACGCACGTTGTTGCCAGAGAGTCTTGATTTCTTGTAATGTAAAGTTTCTTATCCATCTCTATGTAACATTATGTAAAATGTCCCAACCATGTATAATTAGTGGTTCAGCTGTTAAAATAACAGCCGTTAAAAATATTTGTAAATGCGTTAAAATGTAAAAACTGCGAAAACAAATAAAATTAGCTGAGGGTCACTGTGGCCAATCAGTCCTATTGTGCTCGCGCCGTCAACAC
dp5 XL_group3a:3297-3545 + ATTTCCAAATGTAAACAAACGCACGTTGTTGCCAGAGAGTCTTGATTTCTTGTAATGTAAAGTTCCTTATCCATTTCTATGTAACATTATGTAAAATAACCCAACCATGTATAATTAGTGGTTCAGCTGTTAAAATAACAGCCTTTAAAAATATTTGTAAATGCGTTTAAATGTAA-AACTGCGAA-ACAAATAAACTTAGCTGAGGGTCACTGTGGCCAATCAGTCCTATTGTGCTCGCGCCGTCGACAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
ATTTCCAAATGTAAAAAAACGCACGTTGTTGCCAGAGAGTCTTGATTTCTTGTAATGTAAAGTTTCTTATCCATCTCTATGTAACATTATGTAAAATGTCCCAACCATGTATAATTAGTGGTTCAGCTGTTAAAATAACAGCCGTTAAAAATATTTGTAAATGCGTTAAAATGTAAAAACTGCGAAAACAAATAAAATTAGCTGAGGGTCACTGTGGCCAATCAGTCCTATTGTGCTCGCGCCGTCAACACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................TGTTGCCAGAGAGTCTTGATTTCTTGT......................................................................................................................................................................................................2711.001010000
...............................................TCTTGTAATGTAAAGTTTCTTATCCATC................................................................................................................................................................................2811.001010000
.........................TTGTTGCCAGAGAGTCTTGATTTCTTG.......................................................................................................................................................................................................2711.001010000
...................................AGAGTCTTGATTTCTTGTAATGT.................................................................................................................................................................................................2311.001010000
............................................................................................................................................................................................................................ATCAGTCCTATTGTGCTCGCGCCGTCA....2711.001010000
.....................................AGTCTTGATTTCTTGTAATG..................................................................................................................................................................................................2011.001010000
.................AACGCACGTTGTTGCCAGAGAGTCT.................................................................................................................................................................................................................2511.001010000
.................AACGCACGTTGTTGCCAGA.......................................................................................................................................................................................................................1911.001010000
.................................................................................................................................................TAAAAATATTTGTAAATGCGTTAAAATG..............................................................................2811.001010000
............................................................................................................................................................................................................................ATCAGTCCTATTGTGCTCGCGCC........23150.406150000
............................................................................................................................................................................................................................ATCAGTCCTATTGTGCTCGCGCCG.......24150.274040000
............................................................................................................................................................................................................................ATCAGTCCTATTGTGCTCGCGC.........22160.193030000
...........................................................................................................................................................................................................................AATCAGTCCTATTGTGCTCGC...........2170.141010000
............................................................................................................................................................................................................................ATCAGTCCTATTGTGCTCGCGCCGTC.....26150.132020000
.............................................................................................................................................................................................................................TCAGTCCTATTGTGCTCGCGCC........22150.071010000
............................................................................................................................................................................................................................ATCAGTCCTATTGTGCTCGCGCCGT......25150.071010000
............................................................................................................................................................................................................................ATCAGTCCTATTGTGCTCGCG..........21160.061001000
..................................................................................................................TTAGTGGTTCAGCTGTTAAA.....................................................................................................................20200.051010000
..............................................................................................................................................................................................AATAAAATTAGCTGAGGGTCACTGT....................................25200.051010000
......................................GTCTTGATTTCTTGTAATGTA................................................................................................................................................................................................21200.051010000
....................................................................................................................................................................................TGCGAAAACAAATAAAAT.....................................................18200.051010000
.....................................................................................................................................................................................GCGAAAACAAATAAAATTAGCTGAGG............................................26200.051010000
..................................................................................................................................................................................................AAATTAGCTGAGGGTCACTG.....................................20200.051010000
.................................................................................................................................................................................................AAAATTAGCTGAGGGTCACT......................................20200.051010000
dp5
ATTTCCAAATGTAAACAAACGCACGTTGTTGCCAGAGAGTCTTGATTTCTTGTAATGTAAAGTTCCTTATCCATTTCTATGTAACATTATGTAAAATAACCCAACCATGTATAATTAGTGGTTCAGCTGTTAAAATAACAGCCTTTAAAAATATTTGTAAATGCGTTTAAATGTAA-AACTGCGAA-ACAAATAAACTTAGCTGAGGGTCACTGTGGCCAATCAGTCCTATTGTGCTCGCGCCGTCGACACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................................................................................................................................CTATTGTGCTCGCGCCGTCGACA.23119.001901900000000
....................................................................................................................................................................................TGCGAA-ACAAATAAACTTAGCTGAGGG...........................................27113.001301300000000
....................................................................................................................................................................................................................................TATTGTGCTCGCGCCGTCGACA.22106.906906900000000
...........................................................................................TAAAATAACCCAACCATGTATAATTA......................................................................................................................................2616.0060000000600
...........................................................................................................TGTATAATTAGTGGTTCAGCTGT.........................................................................................................................2315.0050000000500
..........................................................................................................................................................................................................................CAATCAGTCCTATTGTGCTCGCGC.........2415.0050000000500
....................................................................................................................................................................................TGCGAA-ACAAATAAACTTAGCTGAGGGT..........................................2814.0040300001000
............................................................................................................................................................................................................................ATCAGTCCTATTGTGCTCGCGC.........2214.0040300000010
.................................................TTGTAATGTAAAGTTCCTTATCCATT................................................................................................................................................................................2613.0030210000000
...................................................................................................................................................................................................................................CTATTGTGCTCGCGCCGTCGACAC2413.0030300000000
............................................................................................................................................................................................................................ATCAGTCCTATTGTGCTCGCGCCG.......2413.0030300000000
............................................................................................................................................................................................................................ATCAGTCCTATTGTGCTCGCGCC........2313.0030200000100
..........................................................................................................................................................................................................................CAATCAGTCCTATTGTGCTCGCG..........2312.0020000000020
...........................................................................................................TGTATAATTAGTGGTTCAGCTG..........................................................................................................................2212.0020000000200
...................................................................................................................................................................................................................................CTATTGTGCTCGCGCCGTCG....2012.0020100001000
............................................................................................................................................................................................................................ATCAGTCCTATTGTGCTCGCGCCGT......2512.0020200000000
............................................................................................................................................................................................................................ATCAGTCCTATTGTGCTCGCGCCGTC.....2612.0020000000200
......................................................................................................................................................................................................................TGGCCAATCAGTCCTATTGTGCTCGCGC.........2812.0020200000000
...............................................................................................................................................................AATGCGTTTAAATGTAA-AACT......................................................................2112.0020000000200
..............................................................................................................................................................AAATGCGTTTAAATGTAA-AACTG.....................................................................2312.0020000000200
...................................................................................................................................................................................................................................CTATTGTGCTCGCGCCGTCGAC..2212.0020200000000
....................................................................................................................................................................................................................................TATTGTGCTCGCGCCGTCGA...20101.201201200000000
....................................................................................................................................................................................TGCGAA-ACAAATAAACTTAGCTGAG.............................................2511.0010100000000
.....................................................................................................................................................................................GCGAA-ACAAATAAACTTAGCTG...............................................2211.0010100000000
...................................................................................................................................................................................................................................CTATTGTGCTCGCGCCGTCGACT.2311.0010100000000
......................................................................................................................................................................................................................TGGCCAATCAGTCCTATTGTGCTCGCG..........2711.0010100000000
...........................................................................................................TGTATAATTAGTGGTTCAGCT...........................................................................................................................2111.0010000000100
.................................................TTGTAATGTAAAGTTCCTTATCCAT.................................................................................................................................................................................2511.0010100000000
...........................................................................................................................................................TGTAAATGCGTTTAAATGTAA-AAC.......................................................................2411.0010000000100
...................CGCACGTTGTTGCCAGAGAGTCTTGAT.............................................................................................................................................................................................................2711.0010000001000
...........................................................................................................................................................TGTAAATGCGTTTAAATGTAA-AACT......................................................................2511.0010000000010
...................................................................................................................................................................................................................................CTATTGTGCTCGCGCCGTCA....2011.0010000001000
...................................................................................................................................................................................CTGCGAA-ACAAATAAACTTAGCTGAGGG...........................................2811.0010010000000
...................................................................................................................................................................................................................................CTATTGTGCTCGCGCCGTCGA...2111.0010100000000
...................................................................................................................................................................................CTGCGAA-ACAAATAAACTTAGC.................................................2211.0010100000000
.........TGTAAACAAACGCACGTTGTTGCCAGA.......................................................................................................................................................................................................................2711.0010100000000
...............................................................................................................................................................AATGCGTTTAAATGTAA-AACTGCGAA-................................................................2611.0010000000100
..............................................................................................................................................................................................AATAAACTTAGCTGAGGGTCACTG.....................................2411.0010100000000
....................................................................................................................................................................................................................................TATTGTGCTCGCGCCGTCGAC..21101.001001000000000
.....................................AGTCTTGATTTCTTGTAATGTAAA..............................................................................................................................................................................................2411.0010000000010
.TTTCCAAATGTAAACAAACGCACGT.................................................................................................................................................................................................................................2511.0010100000000
........ATGTAAACAAACGCACGTTGTTGCC..........................................................................................................................................................................................................................2511.0010100000000
...............................................................................................................................................................AATGCGTTTAAATGTAA-AACTGCG...................................................................2411.0010000000100
..........................................................................................................................................................................................................................CAATCAGTCCTATTG..................1511.0010000000010
........ATGTAAACAAACGCACGTTGTTGC...........................................................................................................................................................................................................................2411.0010100000000
.................................................TTGTAATGTAAAGTTCCTTATCC...................................................................................................................................................................................2311.0010100000000
...........................................................................................................................................................................................................................AATCAGTCCTATTGTGCTCGC...........2111.0010100000000
....................................................................................................................................................................................TGCGAA-ACAAATAAACTTAGCTGAGG............................................2611.0010100000000
.............................................................................................................................................................................................................................TCAGTCCTATTGTGCTCGCG..........2011.0010100000000
.............AACAAACGCACGTTGTTGCCAGAGA.....................................................................................................................................................................................................................2511.0010100000000
...................................................................................................................................................................................................ACTTAGCTGAGGGTCACTGTG...................................2111.0010100000000
......................................................................................................................................................ATATTTGTAAATGCGTTTAAATGT.............................................................................2411.0010100000000
...........................................................................................................TGTATAATTAGTGGTTCAGCTGTTA.......................................................................................................................2511.0010000000100
....................................................TAATGTAAAGTTCCTTATCC...................................................................................................................................................................................2011.0010100000000
...........TAAACAAACGCACGTTGTTGC...........................................................................................................................................................................................................................2111.0010000000010
....................................................................................................................................................................................................................................TATTGTGCTCGCGCCGTCGACAC23100.8080800000000
.....................................................................................................................................................................................................................................ATTGTGCTCGCGCCGTCGACA.21100.6060600000000
.....................................................................................................................................................................................................TTAGCTGAGGGTCACTGTGG..................................20100.5050200000210
........................................................................................................................................................................................................................................GTGCTCGCGCCGTCGACA.18100.4040400000000
.....................................................................................................................................................................................................................................ATTGTGCTCGCGCCGTCGAC..20100.3030300000000
......................................................................................................................................................................................................................................TTGTGCTCGCGCCGTCGACA.20100.3030300000000
......................................................................................................................................................................................................TAGCTGAGGGTCACTGTGGCCAAT.............................24100.2020200000000
....................................................................................................................................................................................................................................TATTGTGCTCGCGCCGTCG....19100.2020200000000
.......................................................................................................................................................................................................................................TGTGCTCGCGCCGTCGACA.19100.2020200000000
.................................................................................................................................................TAAAAATATTTGTAAATGCGT.....................................................................................2150.2010100000000
..........................................................................................................................................................................................................TGAGGGTCACTGTGGC.................................16100.2020000000200
......................................................................................................................................................................................................TAGCTGAGGGTCACTGTGG..................................19100.2020100000100
.......................................TCTTGATTTCTTGTAATGTAAAGTT...........................................................................................................................................................................................2560.1710100000000
...............................................................................................................TAATTAGTGGTTCAGCTGTTAA......................................................................................................................2270.1410000001000
...............................................................................................................TAATTAGTGGTTCAGCTGT.........................................................................................................................1970.1410000000010
........................................CTTGATTTCTTGTAATGTA................................................................................................................................................................................................1970.1410100000000
....................................................................................................................................................................................................................................TATTGTGCTCGCGCCGTCGAA..21100.1010100000000
......................................................................................................................................................................................................................................TTGTGCTCGCGCCGTCGAC..19100.1010100000000
.....................................................................................................................................................................................................................................ATTGTGCTCGCGCCGTCGA...19100.1010100000000
.......................................................................................................................................................................................................................................TGTGCTCGCGCCGTCGAC..18100.1010100000000
................................................................................................................................................................................................................TCACTGTGGCCAATCAGTC........................19100.1010100000000
......................................................................................................................................................................................................TAGCTGAGGGTCACTGTGGCCAATCAG..........................27100.1010100000000
.....................................................................................................................................................................................................TTAGCTGAGGGTCACTGTG...................................19100.1010100000000
......................................................................................................................................................................................................TAGCTGAGGGTCACTGTGGC.................................20100.1010100000000
.......................................................................................................................................................................................................AGCTGAGGGTCACTGTGGCCA...............................21100.1010100000000
......................................................................................................................................................................................................................................TTGTGCTCGCGCCGTCGA...18100.1010100000000
.......................................................................................................................................................................................................AGCTGAGGGTCACTGTGG..................................18100.1010100000000
.....................................................................................................................................................................................................TTAGCTGAGGGTCACTGTGGC.................................21100.1010100000000

Generated: 06/08/2015 at 04:47 PM