ID:

dpe_1844

 Coordinate:

scaffold_56:270930-271080 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.5 -8.3 -7.8 -7.7

Flybase annnotation

exon [dper_GLEANR_460:1]; CDS [Dper\GL22408-cds]; intron [Dper\GL22408-in]

No Repeatable elements found

mature
star
  1. scaffold_24:1115407-1115425 +
  2. dpe_1844  scaffold_56:271011-271029 -

Sense Strand Reads

--################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AGATGACTGGTTTTACCAACGGCGGATTCGAGAACGATGAGCCCGTCAAGGTGAGTCTTTCGGATTGCTTTCTGGTCGGCCTGGTCCCAGTAAATCTTAATGAGTTCTGAGCTCTGAGTTCTTCCTTGAATGCCAGCTGTTCTTTGTTATTGGTGAACGTCAATGTTAACGTACGCAATATGAAATCACCGGCTCCCTCAAAGACTTTAACTCGAAGAAAGATCAAACAAATCGCAAACTTTAATTCAAAC
****************************************************************.........((((((....((..(((....((.....))...))).)).)))).))*********************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M021
embryo
 V042
embryo
 M042
female body
 V057
head
 V111
male body
............................CGAGAACGATGAGCCCGT............................................................................................................................................................................................................. 18 0 1 58.00 58 58 0 0 0 0
............................CGAGAACGATGAGCCCGTC............................................................................................................................................................................................................ 19 0 1 33.00 33 32 0 1 0 0
............................CGAGAACGATGAGCCCGTCA........................................................................................................................................................................................................... 20 0 1 10.00 10 10 0 0 0 0
............TTACCAACGGCGGATTCGA............................................................................................................................................................................................................................ 19 0 1 8.00 8 7 1 0 0 0
.........................ATTCGAGAACGATGAGCCC............................................................................................................................................................................................................... 19 0 1 6.00 6 6 0 0 0 0
..........................TTCGAGAACGATGAGCCC............................................................................................................................................................................................................... 18 0 1 5.00 5 5 0 0 0 0
............TTACCAACGGCGGATTCGAGAAC........................................................................................................................................................................................................................ 23 0 1 4.00 4 4 0 0 0 0
..........................TTCGAGAACGATGAGCCCGT............................................................................................................................................................................................................. 20 0 1 4.00 4 3 0 1 0 0
............TTACCAACGGCGGATTCGAGAACGATGA................................................................................................................................................................................................................... 28 0 1 3.00 3 3 0 0 0 0
................................................................TTGCTTTCTGGTCGGCCT......................................................................................................................................................................... 18 0 1 3.00 3 3 0 0 0 0
.......................GGATTCGAGAACGATGAGCCCGTC............................................................................................................................................................................................................ 24 0 1 3.00 3 3 0 0 0 0
...........................TCGAGAACGATGAGCCCGTC............................................................................................................................................................................................................ 20 0 1 3.00 3 3 0 0 0 0
.........................ATTCGAGAACGATGAGCC................................................................................................................................................................................................................ 18 0 1 3.00 3 3 0 0 0 0
............................CGAGAACGATGAGCCCGG............................................................................................................................................................................................................. 18 1 1 3.00 3 3 0 0 0 0
..........................TTCGAGAACGATGAGCCCGTC............................................................................................................................................................................................................ 21 0 1 3.00 3 3 0 0 0 0
.....................GCGGATTCGAGAACGATGAGCCCGTC............................................................................................................................................................................................................ 26 0 1 3.00 3 3 0 0 0 0
.........................ATTCGAGAACGATGAGCCCGT............................................................................................................................................................................................................. 21 0 1 2.00 2 2 0 0 0 0
..........................TTCGAGAACGATGAGCCCGTCAAGCCGAA.................................................................................................................................................................................................... 29 3 1 2.00 2 2 0 0 0 0
............................CGAGAACGATGAGCCCGTCAAGCCGA..................................................................................................................................................................................................... 26 2 1 2.00 2 2 0 0 0 0
...........................TCGAGAACGATGAGCCCGT............................................................................................................................................................................................................. 19 0 1 2.00 2 2 0 0 0 0
............................CGAGAACGATGAGCCCGTCAAGCCGG..................................................................................................................................................................................................... 26 3 1 2.00 2 2 0 0 0 0
...........TTTACCAACGGCGGATTCGAGAAC........................................................................................................................................................................................................................ 24 0 1 2.00 2 2 0 0 0 0
.............................GAGAACGATGAGCCCGTC............................................................................................................................................................................................................ 18 0 1 2.00 2 2 0 0 0 0
.....................................................................................................GAGTTCTGAGCTCTGAGTT................................................................................................................................... 19 0 2 1.50 3 3 0 0 0 0
.............................................................................................ATCTTAATGAGTTCTGAGCTCTGAGTT................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
............TTACCAACGGCGGATTCGAGAACGATGG................................................................................................................................................................................................................... 28 1 1 1.00 1 1 0 0 0 0
......................CGGATTCGAGAACGATGAGCCCGT............................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................TTTGTTATTGGTGAACGTCAATGTTAAC................................................................................. 28 0 1 1.00 1 1 0 0 0 0
..........................TTCGAGAACGATGAGCCCGC............................................................................................................................................................................................................. 20 1 1 1.00 1 1 0 0 0 0
............TTACCAACGGCGGATTCGAGAACTAT..................................................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0
...........TTTACCAACGGCGGATTCGAGAACG....................................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0
.............TACCAACGGCGGATTCGA............................................................................................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0
...........TTTACCAACGGCGGATTC.............................................................................................................................................................................................................................. 18 0 1 1.00 1 1 0 0 0 0
........................GATTCGAGAACGATGAGCCCGC............................................................................................................................................................................................................. 22 1 1 1.00 1 1 0 0 0 0
..............ACCAACGGCGGATTCGAGAAC........................................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0
............TTACCAACGGCGGATTCGAGAACGATG.................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
........................GATTCGAGAACGATGAGCCC............................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
............................CGAGAACGATGAGCCCGTCAAG......................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
............................CGGGAACGATGAGCCCGTC............................................................................................................................................................................................................ 19 1 1 1.00 1 1 0 0 0 0
.............TACCAACGGCGGATTCGAGAACGAT..................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
................CAACGGCGGATTCGAGAACGATGA................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
........................................................CTTTCGGATTGCTTTCTGGG............................................................................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0
........................................................CTTTCGGATTGCTTTCTGGTCGGCCTGGT...................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................TCTTTGTTATTGGTGAACGT........................................................................................... 20 0 1 1.00 1 0 1 0 0 0
.................AACGGCGGATTCGAGAAC........................................................................................................................................................................................................................ 18 0 1 1.00 1 0 1 0 0 0
.........................................................................................GTAAATCTTAATGAGTTCTGAGCT.......................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
........................................................CTTTCGGATTGCTTTCTGGT............................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
............TTACCAACGGCGGATTCGAGA.......................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
............TTACCAACGGCGGAATCGAGAACGAT..................................................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0
...............................GAACGATGAGCCCGTCAAGCC....................................................................................................................................................................................................... 21 2 1 1.00 1 0 0 1 0 0
............................CGAGAACGATGAGCCCGC............................................................................................................................................................................................................. 18 1 1 1.00 1 1 0 0 0 0
............................CGAGGACGATGAGCCCGT............................................................................................................................................................................................................. 18 1 2 0.50 1 1 0 0 0 0
........GGTTTTACCAACTGCGGCT................................................................................................................................................................................................................................ 19 2 3 0.33 1 1 0 0 0 0
.........................................................................................................................ATCCTCGAGTGCCAGCTGTTCT............................................................................................................ 22 3 3 0.33 1 0 0 0 1 0
............................CGAGAACGATGAGCCCAC............................................................................................................................................................................................................. 18 2 6 0.17 1 1 0 0 0 0
.........GTTTTACCAACTGCGGCT................................................................................................................................................................................................................................ 18 2 8 0.13 1 0 0 1 0 0
................................................................TTGCTTTCTGGGCGGCGT......................................................................................................................................................................... 18 2 9 0.11 1 0 0 0 1 0
.........GTTTTACCAACTGCGGCTA............................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 1

Anti-sense strand reads

TCTACTGACCAAAATGGTTGCCGCCTAAGCTCTTGCTACTCGGGCAGTTCCACTCAGAAAGCCTAACGAAAGACCAGCCGGACCAGGGTCATTTAGAATTACTCAAGACTCGAGACTCAAGAAGGAACTTACGGTCGACAAGAAACAATAACCACTTGCAGTTACAATTGCATGCGTTATACTTTAGTGGCCGAGGGAGTTTCTGAAATTGAGCTTCTTTCTAGTTTGTTTAGCGTTTGAAATTAAGTTTG
***********************************************************************************************************************************.........((((((....((..(((....((.....))...))).)).)))).))**************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V050
head
 V057
head
.................................................................................................................GAGTCAGGAAGCAACTTACGGT.................................................................................................................... 22 3 1 1.00 1 1 0
....................................................................................................................................................................................ACTTTAGTGGCGCAGGGCGT................................................... 20 3 2 0.50 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_56:270880-271130 - dpe_1844 AGATGACTGGTTTTACCAACGGCGGATTCGAGAACGATGAGCCCGTCAAGGTGAGTCTTTC-GGATT-----GCTTTCTG-GTCGGCCTG-------------GT--------------------------------------CCCAG-TAAATCTTAATGAGTTCTGAG---CTCTGAGTTCTTCCTTGA---ATGCCAGCTGTT-------CTTTGTTATTGGTGAAC----GTCAATGTTAACGTACGCAATATGAAATCACCGGCTC------------CCTCAAAGACTTTAACTCGAAGAAAGA-TCAAACAAATCGCAAACTTTAATTCAAAC
dp5 XL_group3b:244565-244802 - AGATGACTGGTTTTACCAACGGCGGATTCGAGAACGATGAGCCCGTCAAGGTGAGTCTTTC-GGATT-----GCTTCCTG-GTCGGCCTG-------------GT--------------------------------------CCCAG-TAAATCTTAATGAGTTCTGAG---CTCTGAGTTCTTCCTTGA---ATGCCAGCTGTT-------CTTT-----------------GTTAATGTTAACGTACGCAATATGAAATCACCGGCTC------------CCTCAAAGACTTTAACTCGAAGAAAGA-TCAAACAAATCGCAAACTTTAATTCAAAC
droWil2 scf2_1100000004963:4639386-4639445 - AAATGACTGGTTTTACCAACGCCGGCTTCGAAAACGATGAGCCAGTTAAGGTAAGTTGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12970:6506041-6506099 - AAATGACTGGTTTTACCAACGCCGGCTTTGAGAATGATGAGCCCGTCAAGGTGAGTGTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6473:1485422-1485477 + AGATGACTGGTTTTACAAACGCTGGCTTCGAGAACGATGAGCCCGTCAAGGTGAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_14853:5984850-5984908 + AAATGACTGGTTTTACTAACGGCGGCTTTGAGAACGATGAGCCCGTCAAGGTGAGTCTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13334:600482-600542 - CGATGACTGGCTTCACCAACGCTGGTTTTGAAAACGATGAGCCCGTCAAGGTGAGTGTTTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396431:957301-957361 + CGATGACTGGCTTCACCAACGCTGGTTTTGAAAACGATGAGCCCGTCAAGGTGAGTGTTTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000301542:126794-126852 - AGATGACTGGTTTCACGAACGCCGGTTTCGAAAACGATGAGCCCGTCAAGGTGAGTGTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000454077:1356191-1356443 - AGATGACTGGTTTCACGAACGCCGGCTTCGAGAACGATGAGCCCGTCAAGGTGAGTGTTCC-GTAGT-----ACCTTTTT-GTTTTTTTTT-T-T-----------------------------------------------------TGGGTTCCCAAGTAGTTCTCT-CCCCGAGGAGTGCTTACCTGG---TTTTCACCTCCTCATCATTCATTCATCTTGAACAAGTGCTGGACACGTCAACGTACCCATAATGAAATCACCGGC--------------CCACAAATCTTGTAAACAAAGGCGGGC-GAAAAGAAATCGCGAAACG------AGGC
droEle1 scf7180000490546:608584-608831 - AGATGACTGGTTTCACGAACGCCGGTTTCGAGAACGATGAGCCCGTCAAGGTGAGTGTTCC-GTAGT-----GCCTTTTT--------------TGGGGTCTGGT-------------------------------------------CTGGGTCCCAAGTAGTTCTCT-CCCCGTGGAGTGCCTACCTGG---ATTTCACCTCCT-------CATTCATCTTGAACAAGTGCCGGACACGTCAACGTACCCACAATGAAATCACCGGC--------------CCACAAATCTTGTAAACAAAGGCAGGC-GAAAAGAAATCACAAAATTGGGCTCA---
droRho1 scf7180000779614:68370-68633 - AGATGACTGGTTTCACCAACGCCGGTTTCGAGAACGATGAGCCCGTCAAGGTGAGTGTTCC-GTAGT-----GCCTTTT---------------TGGGGTCTGGATCTGGGACT----------GAGTCTGAGT--------------CTGGGTCCCAAGTAGTTCTCT-CCCCGAGGAGTGCTTACCTGGT--ATTCCACCTTCC-------CATTCATCTTGAACAAGTGCTGGACACGTCAACGTACCCACAATGAAATCACCGCT--------------AAACAAATCTTGTAAACAAAGGCAGGC-GAAAAGAAATCACGAAATA------AGGC
droBia1 scf7180000302421:1406415-1406691 - AGATGACTGGTTTCACGAACGCCGGCTTCGAGAACGACGAGCCCGTCAAGGTGAGTGTTCC-GTGGT-----GCCTTTTTGGCC------------GGGTCTGGATTCGGGGCTCT-------GGATTCTGGGTTCCGGGGTC-----CGGGGTCCCAAGTAGTTCTCT-CGCCGGCGAGTGCCTACCTGG---CAGCCACCTCCT-------CATTCATCTTGAGCAAGTGCTGGACACGTCAACGCACCCATAATGAAATCACCGGCCCACAGCCCGCAGCCCACAAGTCTTGTAAACAAAGGCAGGC-CAAAAGAA---------------------
droTak1 scf7180000415568:167331-167588 + AGATGACTGGTTTCACGAACGCCGGTTTCGAGAACGATGAGCCCGTCAAGGTGAGTGTTTT---------------------------------TTGGGTCTGAAATTGGGAATCTCGAATCAGGAATCTGGAATCCGGAGTT-----CCAAGTCCCAAGTAGTT-----------------CTTACCTGATGATTTTCACCTCCT-------CATTCATCTTGAACAAGTGCTGGACACGTCAACGTACCCATAATGAAATCACCGGC--------------CCACAAATCTTGTAAACAAAGGCAGGCCAAAAAGAAATCACGAAATG------AGGC
droEug1 scf7180000409065:130436-130495 - AGATGACTGGTTTCACGAACGCCGGTTTCGAGAACGATGAGCCCGTCAAGGTGAGTGTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chrX:16822726-16822983 + AGATGACTGGTTTCACGAACGCCGGTTTCGAGAACGATGAGCCCGTCAAGGTGAGTGTGTATATTTTGTTGTGG----------GCCCTG-CGATGGGATCTGGA-------------------------------------------TGGGATCCCAAGTAGTTCTCCAGTCCGAGGAGTGCTTACCTGA---TTCTCACCTCCT--TC--TCATTCATCTTGAACAAGCGCTGGACACGTCAACGTACCCATAATGAAATCACCGGC--------------CCACAAATCTTGTAAACAAAGGCGGGC-GAAAAGAAATTACGAAACA------AGGC
droSim2 x:15923059-15923317 + dsi_26777 AGATGACTGGTTTCACGAACGCCGGTTTCGAGAACGATGAGCCCGTCAAGGTGAGTGTTTGTATATTGTTGTGC----------GCCCTG-GTATGGGATCTGGA-------------------------------------------TGGGATCCCAAGTAGTTCTCCAGTCCGAGGAGTGCTTACCTGG---CTCCCACCTCCC-ACC--TCATTCATCTTGAACAAGCACTGGACACGTCAACGTACCCATAATGAAATCACCGGC--------------CCACAAATCTTGTAAACAAAGGCGAGC-GAAAAGAAATTACGAAACA------AGGC
droSec2 scaffold_17:656762-657020 + AGATGACTGGTTTCACGAACGCCGGTTTCGAGAACGATGAGCCCGTCAAGGTGAGTGTTTATATTTTGTTGTGC----------GCCCTG-GTATGGGATTTGGA-------------------------------------------TGGGATCCCAAGTAGTTCTCCAGCCCGAGGAGTGCTTACCTGG---CTCCCTCCTCCC-ACC--TCATTCATCTTGAAGAAGCGCTGGACACGTCAACGTACCCATAATGAAATCACCGGC--------------CCACAAATCTTGTAAACAAAGGCGAGC-GAAAAGAAATTACGAAACA------AGGC
droYak3 X:15433378-15433631 + dya_1437 AGATGACTGGTTTCACGAACGCCGGTTTCGAGAACGATGAGCCCGTCAAGGTGAGTGTTTT-ACTTTGTTATGG----------GTTCTG-GGATGGGATATGGC-------------------------------------------TGGGATCCCAAGTAGTTCTCCACCTCGTGGAGTGCTTACCTGG---CTTGCACCTCCT-------CATTCATCTTGAACAAGCGCTGGACACGTCAACGTACCCATAATGAAATCACCGGC--------------CCACAAATCTTGTAAACAAAGGCGGGC-GAAGAGAAATTACGAAACA------AGGC
droEre2 scaffold_4690:7177677-7177925 + AGATGACTGGTTTCACGAACGCCGGTTTCGAGAACGATGAGCCCGTCAAGGTGAGTGTTTT-ATTTTGCTGTGG----------GTTCT------GGGATCTGGA-------------------------------------------TGGGGTCCCAAGTAGTTCTCCACACCGAGGAGTGCTTACCTGG---TTTCCACCTCCT-------CATTCATCTTGAACAAGCGCTGGACACGTCAATGTACCCATAATGAAATCACCGGC--------------CCACAAATCTTGTAAACAAAGGCGGGC-GAAAAGAAATTACGAAACA------AGGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
AGATGACTGGTTTTACCAACGGCGGATTCGAGAACGATGAGCCCGTCAAGGTGAGTCTTTC-GGATT-----GCTTTCTG-GTCGGCCTG-------------GT--------------------------------------CCCAG-TAAATCTTAATGAGTTCTGAG---CTCTGAGTTCTTCCTTGA---ATGCCAGCTGTT-------CTTTGTTATTGGTGAAC----GTCAATGTTAACGTACGCAATATGAAATCACCGGCTC------------CCTCAAAGACTTTAACTCGAAGAAAGA-TCAAACAAATCGCAAACTTTAATTCAAACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................CGAGAACGATGAGCCCGT......................................................................................................................................................................................................................................................................................................18158.00585800000
............................CGAGAACGATGAGCCCGTC.....................................................................................................................................................................................................................................................................................................19133.00333210000
............................CGAGAACGATGAGCCCGTCA....................................................................................................................................................................................................................................................................................................20110.00101000000
............TTACCAACGGCGGATTCGA.....................................................................................................................................................................................................................................................................................................................1918.008701000
.........................ATTCGAGAACGATGAGCCC........................................................................................................................................................................................................................................................................................................1916.006600000
..........................TTCGAGAACGATGAGCCC........................................................................................................................................................................................................................................................................................................1815.005500000
............TTACCAACGGCGGATTCGAGAAC.................................................................................................................................................................................................................................................................................................................2314.004400000
..........................TTCGAGAACGATGAGCCCGT......................................................................................................................................................................................................................................................................................................2014.004310000
............TTACCAACGGCGGATTCGAGAACGATGA............................................................................................................................................................................................................................................................................................................2813.003300000
.................................................................TT-----GCTTTCTG-GTCGGCCT...........................................................................................................................................................................................................................................................1813.003300000
.......................GGATTCGAGAACGATGAGCCCGTC.....................................................................................................................................................................................................................................................................................................2413.003300000
...........................TCGAGAACGATGAGCCCGTC.....................................................................................................................................................................................................................................................................................................2013.003300000
.........................ATTCGAGAACGATGAGCC.........................................................................................................................................................................................................................................................................................................1813.003300000
............................CGAGAACGATGAGCCCGG......................................................................................................................................................................................................................................................................................................1813.003300000
..........................TTCGAGAACGATGAGCCCGTC.....................................................................................................................................................................................................................................................................................................2113.003300000
.....................GCGGATTCGAGAACGATGAGCCCGTC.....................................................................................................................................................................................................................................................................................................2613.003300000
.........................ATTCGAGAACGATGAGCCCGT......................................................................................................................................................................................................................................................................................................2112.002200000
...........................TCGAGAACGATGAGCCCGT......................................................................................................................................................................................................................................................................................................1912.002200000
...........TTTACCAACGGCGGATTCGAGAAC.................................................................................................................................................................................................................................................................................................................2412.002200000
.............................GAGAACGATGAGCCCGTC.....................................................................................................................................................................................................................................................................................................1812.002200000
................................................................................................................................................................GAGTTCTGAG---CTCTGAGTT..............................................................................................................................................................1921.503300000
........................................................................................................................................................ATCTTAATGAGTTCTGAG---CTCTGAGTT..............................................................................................................................................................2711.001100000
............TTACCAACGGCGGATTCGAGAACGATGG............................................................................................................................................................................................................................................................................................................2811.001100000
......................CGGATTCGAGAACGATGAGCCCGT......................................................................................................................................................................................................................................................................................................2411.001100000
......................................................................................................................................................................................................................TTTGTTATTGGTGAAC----GTCAATGTTAAC..............................................................................................2811.001100000
..........................TTCGAGAACGATGAGCCCGC......................................................................................................................................................................................................................................................................................................2011.001100000
...........TTTACCAACGGCGGATTCGAGAACG................................................................................................................................................................................................................................................................................................................2511.001001000
.............TACCAACGGCGGATTCGA.....................................................................................................................................................................................................................................................................................................................1811.001100000
...........TTTACCAACGGCGGATTC.......................................................................................................................................................................................................................................................................................................................1811.001100000
........................GATTCGAGAACGATGAGCCCGC......................................................................................................................................................................................................................................................................................................2211.001100000
..............ACCAACGGCGGATTCGAGAAC.................................................................................................................................................................................................................................................................................................................2111.001100000
............TTACCAACGGCGGATTCGAGAACGATG.............................................................................................................................................................................................................................................................................................................2711.001100000
........................GATTCGAGAACGATGAGCCC........................................................................................................................................................................................................................................................................................................2011.001100000
............................CGAGAACGATGAGCCCGTCAAG..................................................................................................................................................................................................................................................................................................2211.001100000
.............TACCAACGGCGGATTCGAGAACGAT..............................................................................................................................................................................................................................................................................................................2511.001100000
................CAACGGCGGATTCGAGAACGATGA............................................................................................................................................................................................................................................................................................................2411.001100000
........................................................CTTTC-GGATT-----GCTTTCTG-GG.................................................................................................................................................................................................................................................................2011.001100000
........................................................CTTTC-GGATT-----GCTTTCTG-GTCGGCCTG-------------GT--------------------------------------.....................................................................................................................................................................................................2911.001100000
.............................................................................................................................................................................................................T-------CTTTGTTATTGGTGAAC----GT........................................................................................................2011.001001000
.................AACGGCGGATTCGAGAAC.................................................................................................................................................................................................................................................................................................................1811.001001000
...................................................................................................................................................G-TAAATCTTAATGAGTTCTGAG---CT.....................................................................................................................................................................2411.001100000
........................................................CTTTC-GGATT-----GCTTTCTG-GT.................................................................................................................................................................................................................................................................2011.001100000
............TTACCAACGGCGGATTCGAGA...................................................................................................................................................................................................................................................................................................................2111.001100000
...............................GAACGATGAGCCCGTCAAGCC................................................................................................................................................................................................................................................................................................2111.001010000
............................CGAGAACGATGAGCCCGC......................................................................................................................................................................................................................................................................................................1811.001100000
............................CGAGAACGATGAGCCCAC......................................................................................................................................................................................................................................................................................................1860.171100000
dp5
AGATGACTGGTTTTACCAACGGCGGATTCGAGAACGATGAGCCCGTCAAGGTGAGTCTTTC-GGATT-----GCTTCCTG-GTCGGCCTG-------------GT--------------------------------------CCCAG-TAAATCTTAATGAGTTCTGAG---CTCTGAGTTCTTCCTTGA---ATGCCAGCTGTT-------CTTT-----------------GTTAATGTTAACGTACGCAATATGAAATCACCGGCTC------------CCTCAAAGACTTTAACTCGAAGAAAGA-TCAAACAAATCGCAAACTTTAATTCAAACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................GATTCGAGAACGATGAGCCC........................................................................................................................................................................................................................................................................................................2014.0040310000000
.......................GGATTCGAGAACGATGAGCCCGTC.....................................................................................................................................................................................................................................................................................................2413.0030300000000
........................GATTCGAGAACGATGAGCCCGTC.....................................................................................................................................................................................................................................................................................................2312.0020200000000
.........GTTTTACCAACGGCGGATTCG......................................................................................................................................................................................................................................................................................................................2112.0020200000000
...............................GAACGATGAGCCCGTCAAGC.................................................................................................................................................................................................................................................................................................2012.0020100100000
............TTACCAACGGCGGATTCGA.....................................................................................................................................................................................................................................................................................................................1912.0020200000000
................CAACGGCGGATTCGAGAACGATG.............................................................................................................................................................................................................................................................................................................2311.0010000100000
.........GTTTTACCAACGGCGGATT........................................................................................................................................................................................................................................................................................................................1911.0010100000000
............................CGAGAACGATGAGCCCGTC.....................................................................................................................................................................................................................................................................................................1911.0010100000000
..................................................................................................................................................................GTTCTGAG---CTCTGAGTTCTTCCTTGA---..................................................................................................................................................2611.0010010000000
........GGTTTTACCAACGGCGGATTCGA.....................................................................................................................................................................................................................................................................................................................2311.0010100000000
...........TTTACCAACGGCGGATTCGAGAAC.................................................................................................................................................................................................................................................................................................................2411.0010100000000
............TTACCAACGGCGGATTCGAGAAC.................................................................................................................................................................................................................................................................................................................2311.0010100000000
............TTACCAACGGCGGATTCGAGAACG................................................................................................................................................................................................................................................................................................................2411.0010100000000
................................AACGATGAGCCCGTCAAGCC................................................................................................................................................................................................................................................................................................2011.0010100000000
...........................TCGAGAACGATGAGCCCGT......................................................................................................................................................................................................................................................................................................1911.0010100000000
.................AACGGCGGATTCGAGAACGATG.............................................................................................................................................................................................................................................................................................................2211.0010100000000
........GGTTTTACCAACGGCGGATT........................................................................................................................................................................................................................................................................................................................2011.0010100000000
.....................GCGGATTCGAGAACGATG.............................................................................................................................................................................................................................................................................................................1811.0010100000000
............................CGAGAACGATGAGCCCGTCA....................................................................................................................................................................................................................................................................................................2011.0010000100000
................CAACGGCGGATTCGAGAACGATGAGCC.........................................................................................................................................................................................................................................................................................................2711.0010100000000
....GACTGGTTTTACCAACGGC.............................................................................................................................................................................................................................................................................................................................1911.0010100000000
................CAACGGCGGATTCGAGAACG................................................................................................................................................................................................................................................................................................................2011.0010100000000
....GACTGGTTTTACCAACGGCGGATT........................................................................................................................................................................................................................................................................................................................2411.0010100000000
...............................GAACGATGAGCCCGTCAAGCC................................................................................................................................................................................................................................................................................................2111.0010100000000
droWil2
AAATGACTGGTTTTACCAACGCCGGCTTCGAAAACGATGAGCCAGTTAAGGTAAGTTGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................GGCTTCGAAAACGATGAGC..........................................................................................................................................................................................................................................................................................................1913.00300030
............TTACCAACGCCGGCTTCGAAAAC.................................................................................................................................................................................................................................................................................................................2312.00220000
........GGTTTTACCAACGCCGGCTT........................................................................................................................................................................................................................................................................................................................2012.00211000
................CAACGCCGGCTTCGAAAACGATGAG...........................................................................................................................................................................................................................................................................................................2511.00100010
.................AACGCCGGCTTCGAAAACGATGAGCC.........................................................................................................................................................................................................................................................................................................2611.00100010
................CAACGCCGGCTTCGAAAACGATGAGCCA........................................................................................................................................................................................................................................................................................................2811.00100010
............................CGAAAACGATGAGCCAGTT.....................................................................................................................................................................................................................................................................................................1911.00100010
.............................GAAAACGATGAGCCAGTTAA...................................................................................................................................................................................................................................................................................................2011.00100010
..........................TTCGAAAACGATGAGCCAGTTAAGCC................................................................................................................................................................................................................................................................................................2611.00100100
...........................TCGAAAACGATGAGCCAGTTAAG..................................................................................................................................................................................................................................................................................................2311.00100001
.............TACCAACGCCGGCTTCGA.....................................................................................................................................................................................................................................................................................................................1811.00100010
.................AACGCCGGCTTCGAAAAC.................................................................................................................................................................................................................................................................................................................1811.00100010
................................AACGATGAGCCAGTTAAGC.................................................................................................................................................................................................................................................................................................1911.00100010
..........................TTCGAAAACGATGAGCCA........................................................................................................................................................................................................................................................................................................1811.00100010
droVir3
AAATGACTGGTTTTACCAACGCCGGCTTTGAGAATGATGAGCCCGTCAAGGTGAGTGTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.AATGACTGGTTTTACCAACGCC.............................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
......................CGGCTTTGAGAATGATGAGCC.........................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000010000000000000000000000000
...................CGCCGGCTTTGAGAATGATGA............................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000001000
.......................GGCTTTGAGAATGATGAGCCCGTCAAGC.................................................................................................................................................................................................................................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
.........................CTTTGAGAATGATGAGCCCGTC.....................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000001000
..............ACCAACGCCGGCTTTGAGAATGATGA............................................................................................................................................................................................................................................................................................................2611.001010000000000000000000000000000000000000000000000000000000000000
droMoj3
AGATGACTGGTTTTACAAACGCTGGCTTCGAGAACGATGAGCCCGTCAAGGTGAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........GGTTTTACAAACGCTGGCTTCGA.....................................................................................................................................................................................................................................................................................................................2311.001000001
.................AACGCTGGCTTCGAGAACGATGAGCCC........................................................................................................................................................................................................................................................................................................2711.001100000
.....................CTGGCTTCGAGAACGATGA............................................................................................................................................................................................................................................................................................................1911.001100000
.................AACGCTGGCTTCGAGAACG................................................................................................................................................................................................................................................................................................................1911.001000001
........GGTTTTACAAACGCTGGCTTCGAG....................................................................................................................................................................................................................................................................................................................2411.001100000
........GGTTTTACAAACGCTGGCTT........................................................................................................................................................................................................................................................................................................................2011.001100000
............TTACAAACGCTGGCTTCGA.....................................................................................................................................................................................................................................................................................................................1911.001100000
........GGTTTTACAAACGCTGGCTTCGAGAA..................................................................................................................................................................................................................................................................................................................2611.001100000
droGri2
AAATGACTGGTTTTACTAACGGCGGCTTTGAGAACGATGAGCCCGTCAAGGTGAGTCTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
....................GGCGGCTTTGAGAACGATGAGCCC........................................................................................................................................................................................................................................................................................................2411.00110
.............................GAGAACGATGAGCCCGTCAAGCC................................................................................................................................................................................................................................................................................................2311.00101
..............................AGAACGATGAGCCCGTCAAGCCA...............................................................................................................................................................................................................................................................................................2320.50101
droAna3
CGATGACTGGCTTCACCAACGCTGGTTTTGAAAACGATGAGCCCGTCAAGGTGAGTGTTTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................AAACGATGAGCCCGTCAAGC.................................................................................................................................................................................................................................................................................................2012.002010010
.......................GGTTTTGAAAACGATGAGCCC........................................................................................................................................................................................................................................................................................................2112.002020000
..........................TTTGAAAACGATGAGCCCGTCAAGCC................................................................................................................................................................................................................................................................................................2612.002011000
........................GTTTTGAAAACGATGAGCCCGTCAA...................................................................................................................................................................................................................................................................................................2512.002000020
..........................TTTGAAAACGATGAGCCC........................................................................................................................................................................................................................................................................................................1812.002020000
...........................TTGAAAACGATGAGCCCGTCAAGCC................................................................................................................................................................................................................................................................................................2511.001010000
.............CACCAACGCTGGTTTTGAAAAC.................................................................................................................................................................................................................................................................................................................2211.001010000
.........................TTTTGAAAACGATGAGCCC........................................................................................................................................................................................................................................................................................................1911.001010000
................CAACGCTGGTTTTGAAAACGATGAGCCC........................................................................................................................................................................................................................................................................................................2811.001010000
........................GTTTTGAAAACGATGAGCCC........................................................................................................................................................................................................................................................................................................2011.001010000
...................................GATGAGCCCGTCAAGGTGAGT............................................................................................................................................................................................................................................................................................2111.001001000
................................AACGATGAGCCCGTCAAGCC................................................................................................................................................................................................................................................................................................2011.001010000
...............................AAACGATGAGCCCGTCAAGCC................................................................................................................................................................................................................................................................................................2111.001010000
.........................TTTTGAAAACGATGAGCCCGC......................................................................................................................................................................................................................................................................................................2111.001010000
..........................TTTGAAAACGATGAGCCCGTC.....................................................................................................................................................................................................................................................................................................2111.001010000
..........................TTTGAAAACGATGAGCCCGTCAAGC.................................................................................................................................................................................................................................................................................................2511.001000010
......CTGGCTTCACCAACGCTGGT..........................................................................................................................................................................................................................................................................................................................2011.001010000
......CTGGCTTCACCAACGCTGGTT.........................................................................................................................................................................................................................................................................................................................2111.001010000
...TGACTGGCTTCACCAACGCTGGT..........................................................................................................................................................................................................................................................................................................................2311.001010000
..ATGACTGGCTTCACCAACGCTGG...........................................................................................................................................................................................................................................................................................................................2311.001100000
..........................TTTGAAAACGATGAGCCCGC......................................................................................................................................................................................................................................................................................................2011.001010000
.............CACCAACGCTGGTTTTGAAAACGA...............................................................................................................................................................................................................................................................................................................2411.001100000
.................AACGCTGGTTTTGAAAACGATGAGCCC........................................................................................................................................................................................................................................................................................................2711.001010000
................CAACGCTGGTTTTGAAAACGATGAGC..........................................................................................................................................................................................................................................................................................................2611.001100000
...........TTCACCAACGCTGGTTTTGAAAAC.................................................................................................................................................................................................................................................................................................................2411.001010000
droBip1
CGATGACTGGCTTCACCAACGCTGGTTTTGAAAACGATGAGCCCGTCAAGGTGAGTGTTTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
AGATGACTGGTTTCACGAACGCCGGTTTCGAAAACGATGAGCCCGTCAAGGTGAGTGTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
AGATGACTGGTTTCACGAACGCCGGCTTCGAGAACGATGAGCCCGTCAAGGTGAGTGTTCC-GTAGT-----ACCTTTTT-GTTTTTTTTT-T-T-----------------------------------------------------TGGGTTCCCAAGTAGTTCTCT-CCCCGAGGAGTGCTTACCTGG---TTTTCACCTCCTCATCATTCATTCATCTTGAACAAGTGCTGGACACGTCAACGTACCCATAATGAAATCACCGGC--------------CCACAAATCTTGTAAACAAAGGCGGGC-GAAAAGAAATCGCGAAACG------AGGCSizeHit CountTotal NormTotal
No Reads
droEle1
AGATGACTGGTTTCACGAACGCCGGTTTCGAGAACGATGAGCCCGTCAAGGTGAGTGTTCC-GTAGT-----GCCTTTTT--------------TGGGGTCTGGT-------------------------------------------CTGGGTCCCAAGTAGTTCTCT-CCCCGTGGAGTGCCTACCTGG---ATTTCACCTCCT-------CATTCATCTTGAACAAGTGCCGGACACGTCAACGTACCCACAATGAAATCACCGGC--------------CCACAAATCTTGTAAACAAAGGCAGGC-GAAAAGAAATCACAAAATTGGGCTCA---SizeHit CountTotal NormTotal
No Reads
droRho1
AGATGACTGGTTTCACCAACGCCGGTTTCGAGAACGATGAGCCCGTCAAGGTGAGTGTTCC-GTAGT-----GCCTTTT---------------TGGGGTCTGGATCTGGGACT----------GAGTCTGAGT--------------CTGGGTCCCAAGTAGTTCTCT-CCCCGAGGAGTGCTTACCTGGT--ATTCCACCTTCC-------CATTCATCTTGAACAAGTGCTGGACACGTCAACGTACCCACAATGAAATCACCGCT--------------AAACAAATCTTGTAAACAAAGGCAGGC-GAAAAGAAATCACGAAATA------AGGCSizeHit CountTotal NormTotal
No Reads
droBia1
AGATGACTGGTTTCACGAACGCCGGCTTCGAGAACGACGAGCCCGTCAAGGTGAGTGTTCC-GTGGT-----GCCTTTTTGGCC------------GGGTCTGGATTCGGGGCTCT-------GGATTCTGGGTTCCGGGGTC-----CGGGGTCCCAAGTAGTTCTCT-CGCCGGCGAGTGCCTACCTGG---CAGCCACCTCCT-------CATTCATCTTGAGCAAGTGCTGGACACGTCAACGCACCCATAATGAAATCACCGGCCCACAGCCCGCAGCCCACAAGTCTTGTAAACAAAGGCAGGC-CAAAAGAA---------------------SizeHit CountTotal NormTotal
No Reads
droTak1
AGATGACTGGTTTCACGAACGCCGGTTTCGAGAACGATGAGCCCGTCAAGGTGAGTGTTTT---------------------------------TTGGGTCTGAAATTGGGAATCTCGAATCAGGAATCTGGAATCCGGAGTT-----CCAAGTCCCAAGTAGTT-----------------CTTACCTGATGATTTTCACCTCCT-------CATTCATCTTGAACAAGTGCTGGACACGTCAACGTACCCATAATGAAATCACCGGC--------------CCACAAATCTTGTAAACAAAGGCAGGCCAAAAAGAAATCACGAAATG------AGGCSizeHit CountTotal NormTotal
No Reads
droEug1
AGATGACTGGTTTCACGAACGCCGGTTTCGAGAACGATGAGCCCGTCAAGGTGAGTGTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
AGATGACTGGTTTCACGAACGCCGGTTTCGAGAACGATGAGCCCGTCAAGGTGAGTGTGTATATTTTGTTGTGG----------GCCCTG-CGATGGGATCTGGA-------------------------------------------TGGGATCCCAAGTAGTTCTCCAGTCCGAGGAGTGCTTACCTGA---TTCTCACCTCCT--TC--TCATTCATCTTGAACAAGCGCTGGACACGTCAACGTACCCATAATGAAATCACCGGC--------------CCACAAATCTTGTAAACAAAGGCGGGC-GAAAAGAAATTACGAAACA------AGGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................GAACGATGAGCCCGTCAA...................................................................................................................................................................................................................................................................................................1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TCACGAACGCCGGTTTCGAGAACG................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....ACTGGTTTCACGAACGCCGGTTTCGA.....................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................GAACGATGAGCCCGTCAAGCCA...............................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TCACGAACGCCGGTTTCGAGAAC.................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TTCACGAACGCCGGTTTCGA.....................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TTTCGAGAACGATGAGCC.........................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................GAACGATGAGCCCGTCAAGC.................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TTCGAGAACGATGAGCCCGTCAAGCC................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............CGAACGCCGGTTTCGAGAAC.................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GGTTTCACGAACGCCGGTTTC.......................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................ACGCCGGTTTCGAGAACGATGA............................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
......CTGGTTTCACGAACGCCGGT..........................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TTTCGAGAACGATGAGCCC........................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..........TTTCACGAACGCCGGTTTCGA.....................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................TCCAGTCCGAGGAGTGCT............................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
........GGTTTCACGAACGCCGGTTTCG......................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...........TTCACGAACGCCGGTTTCGAGAACGATG.............................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CCGGTTTCGAGAACGATGAGCC.........................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..................ACGCCGGTTTCGAGAACGATG.............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................GAGAACGATGAGCCCGTC.....................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
....GACTGGTTTCACGAACGCC.............................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AACGCCGGTTTCGAGAAC.................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................GAACGATGAGCCCGTCAAGCC................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............CGAACGCCGGTTTCGAGAACGATGAGC..........................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.............CACGAACGCCGGTTTCGAGAACGATGA............................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........GTTTCACGAACGCCGGTTTCGAGA...................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................GAGAACGATGAGCCCGTCAAG..................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................ACCTCCT--TC--TCATTCATC.......................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AACGCCGGTTTCGAGAACGATGAGCCC........................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CGAGAACGATGAGCCCGTCAA...................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................AGAACGATGAGCCCGTCAA...................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
..........................TTCGAGAACGATGAGCCCGT......................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GGTTTCACGAACGCCGGTTTCGAGA...................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................TGAGCCCGTCAAGGTGAGTGT..........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................TAGTTCTCCAGTCCGAGGTTG...............................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................ACGATGAGCCCGTCAAGCCA...............................................................................................................................................................................................................................................................................................2050.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
droSim2
AGATGACTGGTTTCACGAACGCCGGTTTCGAGAACGATGAGCCCGTCAAGGTGAGTGTTTGTATATTGTTGTGC----------GCCCTG-GTATGGGATCTGGA-------------------------------------------TGGGATCCCAAGTAGTTCTCCAGTCCGAGGAGTGCTTACCTGG---CTCCCACCTCCC-ACC--TCATTCATCTTGAACAAGCACTGGACACGTCAACGTACCCATAATGAAATCACCGGC--------------CCACAAATCTTGTAAACAAAGGCGAGC-GAAAAGAAATTACGAAACA------AGGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........GGTTTCACGAACGCCGGTTTCGAGAAC.................................................................................................................................................................................................................................................................................................................2716.00605100000000000000
............................CGAGAACGATGAGCCCGT......................................................................................................................................................................................................................................................................................................1816.00605100000000000000
...............................................................................................................................................................................................................................................................................................................GGCGAGC-GAAAAGAA.....................1585.25420000001681152000000
..........................TTCGAGAACGATGAGCCCGT......................................................................................................................................................................................................................................................................................................2014.00404000000000000000
..........................TTCGAGAACGATGAGCCC........................................................................................................................................................................................................................................................................................................1813.00302100000000000000
.GATGACTGGTTTCACGAACGCC.............................................................................................................................................................................................................................................................................................................................2213.00303000000000000000
...........................TCGAGAACGATGAGCCCGT......................................................................................................................................................................................................................................................................................................1912.00202000000000000000
........................GTTTCGAGAACGATGAGCCCGT......................................................................................................................................................................................................................................................................................................2212.00201100000000000000
.......................GGTTTCGAGAACGATGAGCCCGT......................................................................................................................................................................................................................................................................................................2312.00201100000000000000
.........................TTTCGAGAACGATGAGCCC........................................................................................................................................................................................................................................................................................................1912.00200200000000000000
............TCACGAACGCCGGTTTCGAGA...................................................................................................................................................................................................................................................................................................................2112.00200200000000000000
...........................TCGAGAACGATGAGCCCGG......................................................................................................................................................................................................................................................................................................1911.00101000000000000000
......................CGGTTTCGAGAACGATGAGCCC........................................................................................................................................................................................................................................................................................................2211.00101000000000000000
.......................GGTTTCGAGAACGATGAGCCCGG......................................................................................................................................................................................................................................................................................................2311.00101000000000000000
..........................TTCGAGAACGATGAGCCCGTCAA...................................................................................................................................................................................................................................................................................................2311.00101000000000000000
.........GTTTCACGAACGCCGGTTTCGAGAAC.................................................................................................................................................................................................................................................................................................................2611.00101000000000000000
........................GTTTCGAGAACGATGAGCCC........................................................................................................................................................................................................................................................................................................2011.00101000000000000000
.GATGACTGGTTTCACGAAC................................................................................................................................................................................................................................................................................................................................1911.00101000000000000000
...................CGCCGGTTTCGAGAACGATGAGCC.........................................................................................................................................................................................................................................................................................................2411.00101000000000000000
...........TTCACGAACGCCGGTTTCGAGAAC.................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
........GGTTTCACGAACGCCGGTTTC.......................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
.............................GAGAACGATGAGCCCGTCA....................................................................................................................................................................................................................................................................................................1911.00101000000000000000
.........GTTTCACGAACGCCGGTTTCGA.....................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
........GGTTTCACGAACGCCGGTTTCGA.....................................................................................................................................................................................................................................................................................................................2311.00101000000000000000
....................GCCGGTTTCGAGAACGATGAGCCC........................................................................................................................................................................................................................................................................................................2411.00101000000000000000
AGATGACTGGTTTCACGAACGCC.............................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
........GGTTTCACGAACGCCGGTTT........................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
.........................................................................................................................................................................................................................CATCTTGAACAAGCACTGGACACGT..................................................................................................2511.00100010000000000000
....................GCCGGTTTCGAGAACGATGAGCC.........................................................................................................................................................................................................................................................................................................2311.00100100000000000000
..ATGACTGGTTTCACGAACGCC.............................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
...........................TCGAGAACGATGAGCCCGTCAA...................................................................................................................................................................................................................................................................................................2211.00100100000000000000
........GGTTTCACGAACGCCGGTTTCGAG....................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
..................................................................TGTTGTGC----------GCCCTG-GTATGG...................................................................................................................................................................................................................................................2011.00100000000000100000
...............................................................................................................................................................................................................................................................................................................GGCGAGC-GAAAAGAAA....................1680.50400000001201000000
............................CGAGAACGATGAGCCCGG......................................................................................................................................................................................................................................................................................................1820.50101000000000000000
................................................................................................................................................................................................................................................................................................................GCGAGC-GAAAAGAAA....................15110.09100000010000000000
...............................................................................................................................................................................................................................................................................................................GGCGAGC-GAAAAGAAG....................16200.05100000010000000000
droSec2
AGATGACTGGTTTCACGAACGCCGGTTTCGAGAACGATGAGCCCGTCAAGGTGAGTGTTTATATTTTGTTGTGC----------GCCCTG-GTATGGGATTTGGA-------------------------------------------TGGGATCCCAAGTAGTTCTCCAGCCCGAGGAGTGCTTACCTGG---CTCCCTCCTCCC-ACC--TCATTCATCTTGAAGAAGCGCTGGACACGTCAACGTACCCATAATGAAATCACCGGC--------------CCACAAATCTTGTAAACAAAGGCGAGC-GAAAAGAAATTACGAAACA------AGGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................ACGATGAGCCCGTCAAGCC................................................................................................................................................................................................................................................................................................1914.0040040
.............................GAGAACGATGAGCCCGTC.....................................................................................................................................................................................................................................................................................................1813.0030030
.GATGACTGGTTTCACGAACGCCGG...........................................................................................................................................................................................................................................................................................................................2412.0020020
................................AACGATGAGCCCGTCAAGC.................................................................................................................................................................................................................................................................................................1912.0020020
...................CGCCGGTTTCGAGAACGATGAGCCC........................................................................................................................................................................................................................................................................................................2512.0020020
................GAACGCCGGTTTCGAGAA..................................................................................................................................................................................................................................................................................................................1812.0020020
.............CACGAACGCCGGTTTCGAG....................................................................................................................................................................................................................................................................................................................1911.0010010
...................CGCCGGTTTCGAGAACGATGAGCCCGT......................................................................................................................................................................................................................................................................................................2711.0010010
................GAACGCCGGTTTCGAGAACG................................................................................................................................................................................................................................................................................................................2011.0010010
............................CGAGAACGATGAGCCCGT......................................................................................................................................................................................................................................................................................................1811.0010010
....................GCCGGTTTCGAGAACGATGAGCCC........................................................................................................................................................................................................................................................................................................2411.0010010
.........................TTTCGAGAACGATGAGCCC........................................................................................................................................................................................................................................................................................................1911.0010010
....GACTGGTTTCACGAACGCC.............................................................................................................................................................................................................................................................................................................................1911.0010010
.........................................................................................................................................................................AGCCCGAGGAGTGCTTACCTGG---CTCC..............................................................................................................................................2611.0010010
...TGACTGGTTTCACGAACGCCGG...........................................................................................................................................................................................................................................................................................................................2211.0010010
...............................GAACGATGAGCCCGTCAAGC.................................................................................................................................................................................................................................................................................................2011.0010010
.............................GAGAACGATGAGCCCGTCA....................................................................................................................................................................................................................................................................................................1911.0010010
...........TTCACGAACGCCGGTTTCGAGAAC.................................................................................................................................................................................................................................................................................................................2411.0010010
....GACTGGTTTCACGAACGC..............................................................................................................................................................................................................................................................................................................................1811.0010010
............................CGAGAACGATGAGCCCGTCAAGGTGA..............................................................................................................................................................................................................................................................................................2611.0010010
.........GTTTCACGAACGCCGGTTTCGAGAA..................................................................................................................................................................................................................................................................................................................2511.0010010
...............................GAACGATGAGCCCGTCAAGCC................................................................................................................................................................................................................................................................................................2111.0010010
..........TTTCACGAACGCCGGTTT........................................................................................................................................................................................................................................................................................................................1811.0011000
.......................GGTTTCGAGAACGATGAGCCC........................................................................................................................................................................................................................................................................................................2111.0010010
............................CGAGAACGATGAGCCCGTC.....................................................................................................................................................................................................................................................................................................1911.0010010
.............CACGAACGCCGGTTTCGAGAA..................................................................................................................................................................................................................................................................................................................2111.0010010
.GATGACTGGTTTCACGAACGCC.............................................................................................................................................................................................................................................................................................................................2211.0010010
.GATGACTGGTTTCACGAACGC..............................................................................................................................................................................................................................................................................................................................2111.0010010
.........GTTTCACGAACGCCGGTTTCGA.....................................................................................................................................................................................................................................................................................................................2211.0010010
..........TTTCACGAACGCCGGTTTCGAGAA..................................................................................................................................................................................................................................................................................................................2411.0010010
................................AACGATGAGCCCGTCAAGCCA...............................................................................................................................................................................................................................................................................................2120.5010010
droYak3
AGATGACTGGTTTCACGAACGCCGGTTTCGAGAACGATGAGCCCGTCAAGGTGAGTGTTTT-ACTTTGTTATGG----------GTTCTG-GGATGGGATATGGC-------------------------------------------TGGGATCCCAAGTAGTTCTCCACCTCGTGGAGTGCTTACCTGG---CTTGCACCTCCT-------CATTCATCTTGAACAAGCGCTGGACACGTCAACGTACCCATAATGAAATCACCGGC--------------CCACAAATCTTGTAAACAAAGGCGGGC-GAAGAGAAATTACGAAACA------AGGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................GAACGATGAGCCCGTCAAGCC................................................................................................................................................................................................................................................................................................2113.00301200000000
..................ACGCCGGTTTCGAGAACGATGAGCCC........................................................................................................................................................................................................................................................................................................2612.00200200000000
.................AACGCCGGTTTCGAGAACGATGAGCCC........................................................................................................................................................................................................................................................................................................2712.00200200000000
...............................................................................................................................................................................................................................GAACAAGCGCTGGACACGTCAAC..............................................................................................2311.00100100000000
............................CGAGAACGATGAGCCCGT......................................................................................................................................................................................................................................................................................................1811.00100100000000
..................ACGCCGGTTTCGAGAACGA...............................................................................................................................................................................................................................................................................................................1911.00100000010000
....................GCCGGTTTCGAGAACGATGAGCCC........................................................................................................................................................................................................................................................................................................2411.00100100000000
...........................TCGAGAACGATGAGCCCGTCAAGCC................................................................................................................................................................................................................................................................................................2511.00100100000000
..................................CGATGAGCCCGTCAAGGTGAGT............................................................................................................................................................................................................................................................................................2211.00100000010000
.........GTTTCACGAACGCCGGTTTCGA.....................................................................................................................................................................................................................................................................................................................2211.00100100000000
..........................TTCGAGAACGATGAGCCC........................................................................................................................................................................................................................................................................................................1811.00100100000000
..............................AGAACGATGAGCCCGTCAAGCC................................................................................................................................................................................................................................................................................................2211.00100100000000
........................................................................................................C-------------------------------------------TGGGATCCCAAGTAGTTCTCC...........................................................................................................................................................................2211.00100100000000
................................AACGATGAGCCCGTCAAGCC................................................................................................................................................................................................................................................................................................2011.00100000010000
........GGTTTCACGAACGCCGGTTTCGA.....................................................................................................................................................................................................................................................................................................................2311.00101000000000
........................GTTTCGAGAACGATGAGCCCGTCAAGCC................................................................................................................................................................................................................................................................................................2811.00100100000000
........GGTTTCACGAACGCCGGTTTCGAG....................................................................................................................................................................................................................................................................................................................2411.00100000010000
...................CGCCGGTTTCGAGAACGATG.............................................................................................................................................................................................................................................................................................................2011.00100000010000
..............................................................................................................................................................................................................................TGAACAAGCGCTGGACACGTCAACGTA...........................................................................................2711.00100000010000
..................ACGCCGGTTTCGAGAACGATGAGCCCGC......................................................................................................................................................................................................................................................................................................2811.00100100000000
........GGTTTCACGAACGCCGGTTTCGAGAAC.................................................................................................................................................................................................................................................................................................................2711.00100100000000
.......................................................................TGG----------GTTCTG-GGATGGGAT................................................................................................................................................................................................................................................1811.00100001000000
.............................GAGAACGATGAGCCCGTCAAGCC................................................................................................................................................................................................................................................................................................2311.00100000100000
........................GTTTCGAGAACGATGAGCCC........................................................................................................................................................................................................................................................................................................2011.00100100000000
................GAACGCCGGTTTCGAGAACGATGAGCCC........................................................................................................................................................................................................................................................................................................2811.00100100000000
...................CGCCGGTTTCGAGAACGATGAGCCC........................................................................................................................................................................................................................................................................................................2511.00100100000000
............................CGAGAACGATGAGCCCGTCAAGC.................................................................................................................................................................................................................................................................................................2311.00100000010000
.................................ACGATGAGCCCGTCAAGGTGAGT............................................................................................................................................................................................................................................................................................2311.00100000010000
.........................TTTCGAGAACGATGAGCCCGT......................................................................................................................................................................................................................................................................................................2111.00100000010000
droEre2
AGATGACTGGTTTCACGAACGCCGGTTTCGAGAACGATGAGCCCGTCAAGGTGAGTGTTTT-ATTTTGCTGTGG----------GTTCT------GGGATCTGGA-------------------------------------------TGGGGTCCCAAGTAGTTCTCCACACCGAGGAGTGCTTACCTGG---TTTCCACCTCCT-------CATTCATCTTGAACAAGCGCTGGACACGTCAATGTACCCATAATGAAATCACCGGC--------------CCACAAATCTTGTAAACAAAGGCGGGC-GAAAAGAAATTACGAAACA------AGGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................CGAGAACGATGAGCCCGT......................................................................................................................................................................................................................................................................................................1812.0020001010
........GGTTTCACGAACGCCGGTTTCGAGAAC.................................................................................................................................................................................................................................................................................................................2711.0010100000
.......................GGTTTCGAGAACGATGAGCCC........................................................................................................................................................................................................................................................................................................2111.0010100000
....GACTGGTTTCACGAACGCCGG...........................................................................................................................................................................................................................................................................................................................2111.0010000100
...................CGCCGGTTTCGAGAACGATGA............................................................................................................................................................................................................................................................................................................2111.0010001000
..................ACGCCGGTTTCGAGAACGATGAGCCC........................................................................................................................................................................................................................................................................................................2611.0010100000
..............................................................................................................................................................................................................................................................................................CAAATCTTGTAAACAAAGGCGGGC-.............................2411.0010100000
...............................GAACGATGAGCCCGTCAAGCC................................................................................................................................................................................................................................................................................................2111.0010000010
.........GTTTCACGAACGCCGGTTTCGAGAA..................................................................................................................................................................................................................................................................................................................2511.0010100000
........................GTTTCGAGAACGATGAGCCC........................................................................................................................................................................................................................................................................................................2011.0010100000
.................AACGCCGGTTTCGAGAACGATGAGCCC........................................................................................................................................................................................................................................................................................................2711.0010100000
..........................TTCGAGAACGATGAGCCC........................................................................................................................................................................................................................................................................................................1811.0010100000
.........................................................................................................................................................................................................................CATCTTGAACAAGCGCTGGACAC....................................................................................................2311.0010100000
....................GCCGGTTTCGAGAACGATGAGCCCGT......................................................................................................................................................................................................................................................................................................2611.0010100000
..................................CGATGAGCCCGTCAAGCC................................................................................................................................................................................................................................................................................................1850.2010100000

Generated: 06/08/2015 at 04:46 PM