ID:

dpe_1835

 Coordinate:

scaffold_535:8923-9073 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-39.9 -39.5 -39.4

Flybase annnotation

CDS [Dper\GL21450-cds]; exon [dper_GLEANR_352:1]; intron [Dper\GL21450-in]

Repeatable elements

NameClassFamilyStrand
CR1-1_DWilLINECR1-
mature
  1. scaffold_160:58719-58740 -
  2. scaffold_170:52579-52600 -
  3. scaffold_175:79310-79331 -
  4. scaffold_6:545583-545604 -
  5. scaffold_3:1088936-1088957 -
  6. scaffold_12:441815-441836 -
  7. scaffold_89:95785-95806 -
  8. scaffold_90:141697-141718 -
  9. scaffold_87:67053-67074 -
  10. scaffold_59:168226-168247 -
  11. scaffold_189:5718-5739 -
  12. scaffold_797:7719-7740 -
  13. scaffold_114:49711-49732 -
  14. dpe_1835  scaffold_535:9035-9056 -
  15. scaffold_101:68055-68076 -
  16. scaffold_101:77719-77740 -
  17. scaffold_2354:4388-4409 -
  18. scaffold_2721:2724-2745 -
  19. scaffold_646:9368-9389 -
  20. scaffold_8807:580-601 -
star

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTCCGGATATTGCCACCACAGGTACTAGACCTGTGGTGACTAAACCACTGGTGCGAGTCCCACCAAAACGACAAGTTTTTGTTTCACGGCTGACTCTGACCTCACATCTCATGATGTAATTGCTTTTATTCAAGCAAATATAGCGTGAGTTAAGTGGAGAATTTACTTCTCTATGCAGAGATAGCTCGATAGATAGCATCTCTCACTCACTGACACATTTGCTCGCGATATGTCGAGCATAGTGTGAGAGT
**************************************************((((..(((..((.(((((.....))))).))....((((((.(((((.........((((((.((((.((((((......)))))).)))).))))))....((((((((.....)))))))).))))).)))).))...))).))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
...................................................................ACGACAAGTTTTTGTTTCACGG.................................................................................................................................................................. 22 0 20 1.05 21 21
...................................................................ACGACAAGTTTTTGTTTCACGGCTGA.............................................................................................................................................................. 26 0 2 0.50 1 1
.........TTGCCACCACAGGTACTAGAC............................................................................................................................................................................................................................. 21 0 20 0.05 1 1

Anti-sense strand reads

GAGGCCTATAACGGTGGTGTCCATGATCTGGACACCACTGATTTGGTGACCACGCTCAGGGTGGTTTTGCTGTTCAAAAACAAAGTGCCGACTGAGACTGGAGTGTAGAGTACTACATTAACGAAAATAAGTTCGTTTATATCGCACTCAATTCACCTCTTAAATGAAGAGATACGTCTCTATCGAGCTATCTATCGTAGAGAGTGAGTGACTGTGTAAACGAGCGCTATACAGCTCGTATCACACTCTCA
**************************************************((((..(((..((.(((((.....))))).))....((((((.(((((.........((((((.((((.((((((......)))))).)))).))))))....((((((((.....)))))))).))))).)))).))...))).))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V042
embryo
 M021
embryo
 V111
male body		 V057
head
....................................................CGCTCAGGGTGGTTTTGCTGTTCAA.............................................................................................................................................................................. 25 0 2 294.00 588 361 207 12 6 2
.....................................................GCTCAGGGTGGTTTTGCTGTTCAA.............................................................................................................................................................................. 24 0 2 185.00 370 345 14 11 0 0
...................................................ACGCTCAGGGTGGTTTTGCTGTTCAA.............................................................................................................................................................................. 26 0 2 109.50 219 211 2 6 0 0
..................................................CACGCTCAGGGTGGTTTTGCTGTTCAA.............................................................................................................................................................................. 27 0 2 41.50 83 77 5 1 0 0
....................................................CGCTCAGGGTGGTTTTGCTGTTCA............................................................................................................................................................................... 24 0 2 14.00 28 27 1 0 0 0
....................................................CGCTCAGGGTGGTTTTGCTGTTCAAA............................................................................................................................................................................. 26 0 2 10.00 20 12 7 0 0 1
.....................................................GCTCAGGGTGGTTTTGCTGTTCAAA............................................................................................................................................................................. 25 0 2 9.50 19 19 0 0 0 0
.....................................................GCTCAGGGTGGTTTTGCTGTTCA............................................................................................................................................................................... 23 0 2 9.50 19 16 0 3 0 0
...................................................ACGCTCAGGGTGGTTTTGCTGTTCA............................................................................................................................................................................... 25 0 2 7.50 15 15 0 0 0 0
..................................................AACGCTCAGGGTGGTTTTGCTGTTCAA.............................................................................................................................................................................. 27 1 4 7.25 29 23 6 0 0 0
..................................................AAAGCTCAGGGTGGTTTTGCTGTTCAA.............................................................................................................................................................................. 27 2 4 5.75 23 5 0 18 0 0
....................................................AGCTCAGGGTGGTTTTGCTGTTCAA.............................................................................................................................................................................. 25 1 5 5.00 25 18 0 7 0 0
..................................................CACGCTCAGGGTGGTTTTGCTGT.................................................................................................................................................................................. 23 0 2 4.50 9 5 4 0 0 0
....................................................TGCTCAGGGTGGTTTTGCTGTTCAA.............................................................................................................................................................................. 25 1 6 4.17 25 15 3 7 0 0
.................................................CCACGCTCAGGGTGGTTTTGCTGTTCAA.............................................................................................................................................................................. 28 0 2 3.00 6 6 0 0 0 0
....................................................CGCTCAGGGTGGTTTTACTGTTCAA.............................................................................................................................................................................. 25 1 3 3.00 9 8 1 0 0 0
...............................................GACCACGCTCAGGGTGGTTTTGCTGT.................................................................................................................................................................................. 26 0 2 3.00 6 6 0 0 0 0
...................................................ACGCTCAGGGTGGTTTTGCTGTTCAAA............................................................................................................................................................................. 27 0 2 3.00 6 6 0 0 0 0
...................................................ACGCTCAGGGTGGTTTTGCTGT.................................................................................................................................................................................. 22 0 2 3.00 6 4 2 0 0 0
....................................ACTGATTTGGTGACCACGCTCAGGGT............................................................................................................................................................................................. 26 0 2 2.50 5 5 0 0 0 0
.......................................GATTTGGTGACCACGCTCAGGGTGGT.......................................................................................................................................................................................... 26 0 2 2.50 5 4 0 1 0 0
....................................................CGCTCAGGGTGGTTTTGCTGTT................................................................................................................................................................................. 22 0 2 2.50 5 4 1 0 0 0
............................................GGTGACCACGCTCAGGGTGGTTT........................................................................................................................................................................................ 23 0 2 2.50 5 5 0 0 0 0
.....................................................GCTCAGGGTGGTTTTACTGTTCAA.............................................................................................................................................................................. 24 1 3 2.33 7 7 0 0 0 0
....................................................CGCTCAGGGTGGTTTTTCTGTTCAA.............................................................................................................................................................................. 25 1 2 2.00 4 3 1 0 0 0
...................................AACTGATTTGGTGACCACGCTCAGGGT............................................................................................................................................................................................. 27 1 2 2.00 4 4 0 0 0 0
....................................................CGCTCAGGGTGGTTTTCCTGTTCAA.............................................................................................................................................................................. 25 1 2 2.00 4 4 0 0 0 0
....................................................CGCTCAGGGTGGTTTTGCTGTTCAAAA............................................................................................................................................................................ 27 0 2 2.00 4 4 0 0 0 0
..................................................AACGCTCAGGGTGGTTTTGCTGT.................................................................................................................................................................................. 23 1 4 1.75 7 6 1 0 0 0
.....................................................GCTCAGGGTGGTTTTGCTGT.................................................................................................................................................................................. 20 0 2 1.50 3 2 0 0 0 1
.....................................................GCTCAGGGTGGTTTTGCTGTT................................................................................................................................................................................. 21 0 2 1.50 3 2 1 0 0 0
...............................................GACCACGCTCAGGGTGGTTTTGCT.................................................................................................................................................................................... 24 0 2 1.50 3 3 0 0 0 0
........................................ATTTGGTGACCACGCTCAGGGTGGT.......................................................................................................................................................................................... 25 0 2 1.50 3 3 0 0 0 0
..................................................CACGCTCAGGGTGGTTTTGCTGTTCA............................................................................................................................................................................... 26 0 2 1.50 3 3 0 0 0 0
...................................................ACGCTCAGGGTGGTTTTGCTGTTC................................................................................................................................................................................ 24 0 2 1.50 3 3 0 0 0 0
...................................................ACGCTCAGGGTGGTTTTACTGTTCAA.............................................................................................................................................................................. 26 1 3 1.33 4 4 0 0 0 0
........................................................CAGGGTGGTTTTGCTGTTCAAA............................................................................................................................................................................. 22 0 20 1.20 24 0 0 24 0 0
...................................................ACGCTCAGGGTGGTTTTTCTGTTCAA.............................................................................................................................................................................. 26 1 2 1.00 2 2 0 0 0 0
..........................................TTGGTGACCACGCTCAGGGT............................................................................................................................................................................................. 20 0 2 1.00 2 2 0 0 0 0
............................................GGTGACCACGCTCAGGGTGGT.......................................................................................................................................................................................... 21 0 2 1.00 2 2 0 0 0 0
............................................GGTGACCACGCTCAGGGTGGTTTTGC..................................................................................................................................................................................... 26 0 2 1.00 2 2 0 0 0 0
..................................................CACGCTCAGGGTGGTTTTGCTGTT................................................................................................................................................................................. 24 0 2 1.00 2 2 0 0 0 0
.................................................CCACGCTCAGGGTGGTTTTGC..................................................................................................................................................................................... 21 0 2 1.00 2 2 0 0 0 0
...................................................ACGCTCAGGGTGGTTTTGCTGTTCAAAA............................................................................................................................................................................ 28 0 2 1.00 2 0 0 2 0 0
.............................................GTGACCACGCTCAGGGTGGTTT........................................................................................................................................................................................ 22 0 2 1.00 2 2 0 0 0 0
.....................................................GCTCAGGGCGGTTTTGCTGTTCAA.............................................................................................................................................................................. 24 1 2 1.00 2 2 0 0 0 0
....................................................CGTTCAGGGTGGTTTTGCTGTTCAA.............................................................................................................................................................................. 25 1 2 1.00 2 1 1 0 0 0
....................................................CGCTCAGGGTGGTTTTGCTGTTC................................................................................................................................................................................ 23 0 2 1.00 2 0 2 0 0 0
.................................................CCACGCTCAGGGTGGTTTTGCTGT.................................................................................................................................................................................. 24 0 2 1.00 2 2 0 0 0 0
.....................................................GCTCAGGGTGGTTTTGATGTTCAAA............................................................................................................................................................................. 25 1 2 1.00 2 2 0 0 0 0
.................................................CCACGCTCAGGGTGGTTTTGCTG................................................................................................................................................................................... 23 0 2 1.00 2 2 0 0 0 0
....................................................CGCTCAGGGTGTTTTTGCTGTTCAA.............................................................................................................................................................................. 25 1 2 1.00 2 1 1 0 0 0
.....................................................GCTCAGGGTGGTTTTTCTGTTCAA.............................................................................................................................................................................. 24 1 2 1.00 2 2 0 0 0 0
....................................................CGCTCAGGGTTGTTTTGCTGTTCAA.............................................................................................................................................................................. 25 1 3 1.00 3 1 0 2 0 0
.....................................CTGATTTGGTGACCACGCTCAGGGT............................................................................................................................................................................................. 25 0 2 1.00 2 1 1 0 0 0
...................................................ACGCTCAGGGTGGTTTTCCTGTTCAA.............................................................................................................................................................................. 26 1 2 1.00 2 2 0 0 0 0
............................................GGTGACCACGCTCAGGGTGGTTTT....................................................................................................................................................................................... 24 0 2 1.00 2 2 0 0 0 0
...................................................ACGCTCAGGGTGGTTTTGCTGTT................................................................................................................................................................................. 23 0 2 1.00 2 2 0 0 0 0
...............................................GACCACGCTCAGGGTGGTTTTGCTG................................................................................................................................................................................... 25 0 2 1.00 2 2 0 0 0 0
.....................................................GCTCAGGGTGGTTTTCCTGTTCAA.............................................................................................................................................................................. 24 1 2 1.00 2 2 0 0 0 0
....................................................AGCTCAGGGTGGTTTTGCTGTTCA............................................................................................................................................................................... 24 1 5 0.60 3 3 0 0 0 0
.....................CATGATCTGGACACCACTGATTTGGT............................................................................................................................................................................................................ 26 0 20 0.55 11 11 0 0 0 0
.....................................................GCTCAGGATGGTTTTGCTGTTCAA.............................................................................................................................................................................. 24 1 2 0.50 1 0 1 0 0 0
................................................ACCACGCTCAGGGTGGTTTTGCTGT.................................................................................................................................................................................. 25 0 2 0.50 1 1 0 0 0 0
........................................AAATGGTGACCACGCTCAGGGTGGTTT........................................................................................................................................................................................ 27 2 2 0.50 1 1 0 0 0 0
..................................................CACGCTCAGGGTGGTTTCGCTGTTCAA.............................................................................................................................................................................. 27 1 2 0.50 1 0 0 1 0 0
.....................................CTGATTTGGTGACCGCGCTCAGGGT............................................................................................................................................................................................. 25 1 2 0.50 1 1 0 0 0 0
....................................................CGCTCAGGGTGGTTTTGCT.................................................................................................................................................................................... 19 0 2 0.50 1 0 1 0 0 0
....................................................CGCTCAGTGTGGTTTTGCTGTTCAA.............................................................................................................................................................................. 25 1 2 0.50 1 1 0 0 0 0
...........................................TGGTGACCACGCTCAGGGT............................................................................................................................................................................................. 19 0 2 0.50 1 0 1 0 0 0
....................................................CGCTCAGGGTGGTTTTGCTGTTCAAG............................................................................................................................................................................. 26 1 2 0.50 1 1 0 0 0 0
..................................CCACTGATTTGGTGACCACGCTCAGGGT............................................................................................................................................................................................. 28 0 2 0.50 1 1 0 0 0 0
....................................................CGCTCAGGGTAGTTTTGCTGTTCAA.............................................................................................................................................................................. 25 1 2 0.50 1 1 0 0 0 0
.............................GGACACCACTGATTTGGTGACCACGCT................................................................................................................................................................................................... 27 0 2 0.50 1 0 1 0 0 0
.................................................CCACGCTCAGGGTGGTTTTGCTGTTCAG.............................................................................................................................................................................. 28 1 2 0.50 1 1 0 0 0 0
..............................................AGACCACGCTCAGGGTGGTTTTGCTGT.................................................................................................................................................................................. 27 1 2 0.50 1 1 0 0 0 0
...............................................GACCACGCTCAGGGTAGTTTTGCT.................................................................................................................................................................................... 24 1 2 0.50 1 1 0 0 0 0
.....................................................GCTCAGGGTGGTTTTGCTGTTCAG.............................................................................................................................................................................. 24 1 2 0.50 1 1 0 0 0 0
...................................CACTGATTTGGTGACCACGCTCAG................................................................................................................................................................................................ 24 0 2 0.50 1 1 0 0 0 0
....................................................CGCTCAGGGTGGTTTTGCTGTTCAAAAA........................................................................................................................................................................... 28 0 2 0.50 1 1 0 0 0 0
.....................................................GCTCAGTGTGGTTTTGCTGTTCAA.............................................................................................................................................................................. 24 1 2 0.50 1 1 0 0 0 0
.............................................GTGACCACGCTCAGGGTGGTTTTGC..................................................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0
.....................................................GTTCAGGGTGGTTTTGCTGTTCA............................................................................................................................................................................... 23 1 2 0.50 1 1 0 0 0 0
..........................................ATGGTGACCACGCTCAGGGT............................................................................................................................................................................................. 20 1 2 0.50 1 1 0 0 0 0
....................................................CGCTCAGGGTGGTTTCGCTGTTCAA.............................................................................................................................................................................. 25 1 2 0.50 1 0 1 0 0 0
..................................................GACGCTCAGGGTGGTTTTGCTGTTCAA.............................................................................................................................................................................. 27 1 2 0.50 1 1 0 0 0 0
.........................................AATGGTGACCACGCTCAGGGTGGTTT........................................................................................................................................................................................ 26 2 2 0.50 1 1 0 0 0 0
.....................................................GCTCAGGGTGGTTTTGCTGTCCAA.............................................................................................................................................................................. 24 1 2 0.50 1 1 0 0 0 0
.....................................................GCTCAGGGTGTTTTTGCTGTTCAA.............................................................................................................................................................................. 24 1 2 0.50 1 1 0 0 0 0
....................................................CGCTCATGGTGGTTTTGCTGTTCAA.............................................................................................................................................................................. 25 1 2 0.50 1 0 1 0 0 0
....................................................CGCTCAGGGTGGTTTTGCTGT.................................................................................................................................................................................. 21 0 2 0.50 1 1 0 0 0 0
....................................................CGCTCAGGGCGGTTTTGCTGTTCAA.............................................................................................................................................................................. 25 1 2 0.50 1 1 0 0 0 0
.......................................GATTTGGTGACCACGCTCAGGGTGGTT......................................................................................................................................................................................... 27 0 2 0.50 1 1 0 0 0 0
........................................AAATGGTGACCACGCTCAGGGTGGTT......................................................................................................................................................................................... 26 2 2 0.50 1 1 0 0 0 0
.......................................GATTTGGTGACCACGCTCAGGGT............................................................................................................................................................................................. 23 0 2 0.50 1 1 0 0 0 0
.............................GGGCACCACTGATTTGGTGACCACGC.................................................................................................................................................................................................... 26 1 2 0.50 1 1 0 0 0 0
..............................GACACCACTGATTTGGTGACCACGCT................................................................................................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0
....................................................CGCTCAGGATGGTTTTGCTGTTCAA.............................................................................................................................................................................. 25 1 2 0.50 1 0 1 0 0 0
..............................................TGACCACGCTCAGGGTGGTTTTGCTGT.................................................................................................................................................................................. 27 0 2 0.50 1 1 0 0 0 0
.................................................CCACGCTCAGGGTGGTTTTGCTGTTCA............................................................................................................................................................................... 27 0 2 0.50 1 1 0 0 0 0
........................................AATTGGTGACCACGCTCAGGGTGGT.......................................................................................................................................................................................... 25 1 2 0.50 1 1 0 0 0 0
.....................................................GCTCAGGGTGGTTTTGGTGTTCAAA............................................................................................................................................................................. 25 1 2 0.50 1 1 0 0 0 0
............................................GGTGACCACGCTCAGGGTGGTT......................................................................................................................................................................................... 22 0 2 0.50 1 1 0 0 0 0
....................................................CGCTCACGGTGGTTTTGCTGTTCAA.............................................................................................................................................................................. 25 1 2 0.50 1 0 0 1 0 0
..........................................TTGGTGACCACGCTCAGGGTGG........................................................................................................................................................................................... 22 0 2 0.50 1 1 0 0 0 0
.....................................................GTTCAGGGTGGTTTTGCTGTTCAAA............................................................................................................................................................................. 25 1 2 0.50 1 1 0 0 0 0
....................................................CGCTCGGGGTGGTTTTGCTGTTCAA.............................................................................................................................................................................. 25 1 2 0.50 1 0 1 0 0 0
....................................................CGCTCGGGGTGGTTTTGCGGTTCAA.............................................................................................................................................................................. 25 2 2 0.50 1 0 1 0 0 0
....................................................CGCTCGGGGTGGTTTTGCTGTTAAA.............................................................................................................................................................................. 25 2 2 0.50 1 0 1 0 0 0
....................................................CGCTCTGGGTGGTTTTGATGTTCAA.............................................................................................................................................................................. 25 2 2 0.50 1 0 1 0 0 0
....................................................CGCTCAGGGTGGTTTTGCTGTTAAA.............................................................................................................................................................................. 25 1 2 0.50 1 0 1 0 0 0
................................................ACCACGCTCAGGGTGGTTTTGCT.................................................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0
......................................TGATTTGGTGACCACGCTCAGGGT............................................................................................................................................................................................. 24 0 2 0.50 1 1 0 0 0 0
..................................................CACGCTCAGGGTGATTTTGCTGTT................................................................................................................................................................................. 24 1 2 0.50 1 0 1 0 0 0
..............................................TGACCACGCTCAGGGTGGTTTTGCT.................................................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0
...................................................ACGCTCAGGGTGGTTTTGCTGTTCAG.............................................................................................................................................................................. 26 1 2 0.50 1 1 0 0 0 0
............................................GGTGACCACGCTCAGGGTGGTTTTG...................................................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0
..........................................TTGGTGACCACGCTCAGGGTGGTTTT....................................................................................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0
..................................................AACGCTCAGGGTGGTTTTGCTGTT................................................................................................................................................................................. 24 1 4 0.50 2 1 0 0 0 1
.....................................................GCTCAGGGTGGTTTTGCTGTTCAAT............................................................................................................................................................................. 25 1 4 0.50 2 2 0 0 0 0
...............................ACACCACTGATTTGGTGACCACGCTC.................................................................................................................................................................................................. 26 0 2 0.50 1 0 1 0 0 0
..................................................TACGCTCAGGGTGGTTTTGCTGTTCAA.............................................................................................................................................................................. 27 1 2 0.50 1 1 0 0 0 0
...................................................ACGCTCAGGCTGGTTTTGCTGTTCAA.............................................................................................................................................................................. 26 1 2 0.50 1 1 0 0 0 0
....................................................CGCTCAGGGTGGGTTCGATGTTCAA.............................................................................................................................................................................. 25 3 2 0.50 1 0 1 0 0 0
....................................................CGCTCAGGCTGGTTTTGCTGTTCAA.............................................................................................................................................................................. 25 1 2 0.50 1 1 0 0 0 0
..........................................TTGGTGACCACGCTCAGGGTGGT.......................................................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0
.............................................GTGACCACGCTCAGGGTGGTT......................................................................................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0
.................................ACCACTGATTTGGTGACCACGCTCAGGGT............................................................................................................................................................................................. 29 0 2 0.50 1 1 0 0 0 0
....................................TCTGATTTGGTGACCACGCTCAGGGT............................................................................................................................................................................................. 26 1 2 0.50 1 1 0 0 0 0
...................................................ACGCTCAGGGTGGTTTTGCT.................................................................................................................................................................................... 20 0 2 0.50 1 1 0 0 0 0
..............................................TGACCACGCTCAGGGTGGTTTTG...................................................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0
...........................................TGGTGACCACGCTCAGGGTGGTTTT....................................................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0
....................................................CGCTCAGGGTGATTTTGCTGTTCAA.............................................................................................................................................................................. 25 1 2 0.50 1 0 1 0 0 0
.....................................................GCTCAGGGTGGTTTTGCTGTTC................................................................................................................................................................................ 22 0 2 0.50 1 1 0 0 0 0
............................................GGTGACCACGCTCAGGGT............................................................................................................................................................................................. 18 0 2 0.50 1 1 0 0 0 0
...............................................GACCACGCTCAGGGTGGTTTT....................................................................................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0
...................................................ACGCTCAGGGTGGTTTTGCTGTTCAAG............................................................................................................................................................................. 27 1 2 0.50 1 1 0 0 0 0
...................................CACTGATTTGGTGACCACGCTCAGGGT............................................................................................................................................................................................. 27 0 2 0.50 1 1 0 0 0 0
....................................ACTGATTTGGTGACCACGCTCAGGG.............................................................................................................................................................................................. 25 0 2 0.50 1 1 0 0 0 0
....................................................CGCTCAGGGTGGTTTTGCTGTTCCA.............................................................................................................................................................................. 25 1 5 0.40 2 0 2 0 0 0
.................................................ACACGCTCAGGGTGGTTTTGCTGT.................................................................................................................................................................................. 24 1 3 0.33 1 1 0 0 0 0
..................................................CACGCTCAGGGTGGTTTTGCTGTCA................................................................................................................................................................................ 25 2 3 0.33 1 1 0 0 0 0
.....................................................GCTCAGGGTGCTTTTGCTGTTCA............................................................................................................................................................................... 23 1 3 0.33 1 1 0 0 0 0
...............................................GACCACGCTCAGGGTGGATTTGCTGT.................................................................................................................................................................................. 26 1 3 0.33 1 1 0 0 0 0
.....................................................GCACAGGGTGGTTTTGCTGTTCAA.............................................................................................................................................................................. 24 1 3 0.33 1 1 0 0 0 0
............................................GGTGACCACGCTCAGCGTGGTTTT....................................................................................................................................................................................... 24 1 3 0.33 1 1 0 0 0 0
..................................................CACGCTCAGGGTGCTTTTGCTGTTCAA.............................................................................................................................................................................. 27 1 3 0.33 1 1 0 0 0 0
....................................................CGCTCAGAATGGTTTTGCTGTTCAA.............................................................................................................................................................................. 25 2 3 0.33 1 0 1 0 0 0
...................................................TCGCTCAGGGTGGTTTTGCTGTTCAA.............................................................................................................................................................................. 26 1 6 0.33 2 2 0 0 0 0
....................................................CGCGCAGGGTGGTTTTACTGTTCAA.............................................................................................................................................................................. 25 2 3 0.33 1 1 0 0 0 0
.....................................................GCTCAGGGAGGTTTTGCTGTTCAA.............................................................................................................................................................................. 24 1 3 0.33 1 1 0 0 0 0
.....................................................GCTCAGGGTGGTTTTGCTGTTCGA.............................................................................................................................................................................. 24 1 3 0.33 1 1 0 0 0 0
..................................................CACGGTCAGGGTGGTTTTGCTGT.................................................................................................................................................................................. 23 1 3 0.33 1 0 1 0 0 0
....................................................TGCTCAGGGTGGTTTTGCTGTTCA............................................................................................................................................................................... 24 1 6 0.33 2 2 0 0 0 0
....................................................CGCTCAGGGTGGTTTGGCTGTTCAA.............................................................................................................................................................................. 25 1 3 0.33 1 0 1 0 0 0
....................................................TGCTCAGGGTGGTTTTACTGTTCAA.............................................................................................................................................................................. 25 2 7 0.29 2 1 1 0 0 0
..................................................AACGCTCAGGGTGGTTTTGCT.................................................................................................................................................................................... 21 1 4 0.25 1 0 1 0 0 0
..................................................AACGCTCAGGGTGGTTTTGCTGTTC................................................................................................................................................................................ 25 1 4 0.25 1 1 0 0 0 0
..................................................AACGCTCAGGGTGGTTTTGCTGTTCA............................................................................................................................................................................... 26 1 4 0.25 1 1 0 0 0 0
...........................................TGGTGACCACGCTCAGAGTGGTTTT....................................................................................................................................................................................... 25 1 4 0.25 1 1 0 0 0 0
....................................................CGGTCAGGGTGGTTTTGCTGTTCA............................................................................................................................................................................... 24 1 4 0.25 1 1 0 0 0 0
..................................................AAAGCTCAGGGTGGGTTTGCTGTTCAA.............................................................................................................................................................................. 27 3 4 0.25 1 0 0 1 0 0
....................................................CGCTAAGGGTGGTTTTGCGGTTCAA.............................................................................................................................................................................. 25 2 4 0.25 1 0 1 0 0 0
.................................................GAACGCTCAGGGTGGTTTTGCTGTTCAA.............................................................................................................................................................................. 28 2 4 0.25 1 1 0 0 0 0
....................................................CGCTCAGGGTGGTTTTGCTGTTCAT.............................................................................................................................................................................. 25 1 4 0.25 1 0 1 0 0 0
..................................................AATGCTCAGGGTGGTTTTGCTGTTCAA.............................................................................................................................................................................. 27 2 8 0.25 2 2 0 0 0 0
....................................................CGCTCAGGGTGGTTTTGCTGTTCAAT............................................................................................................................................................................. 26 1 4 0.25 1 1 0 0 0 0
.....................................................GCTAAGGGTGGTTTTGCTGTTCAA.............................................................................................................................................................................. 24 1 4 0.25 1 1 0 0 0 0
...............................................GACCACGCTCAGGGTGGTTTTGCTTT.................................................................................................................................................................................. 26 1 5 0.20 1 1 0 0 0 0
.........................................................AGGGTGGTTTTTCTGTTCAA.............................................................................................................................................................................. 20 1 20 0.20 4 4 0 0 0 0
..................................................AAAGCTCAGGGTGGTTTTACTGTTCAA.............................................................................................................................................................................. 27 3 5 0.20 1 1 0 0 0 0
..................................................AGCGCTCAGGGTGGTTTTGCTGTTCAA.............................................................................................................................................................................. 27 2 5 0.20 1 1 0 0 0 0
....................................................AGCTCAGGGTGGTTTTCCTGTTCAA.............................................................................................................................................................................. 25 2 5 0.20 1 1 0 0 0 0
..................................................AACGCTCAGGGTGGTTTTGCTGTG................................................................................................................................................................................. 24 2 5 0.20 1 1 0 0 0 0
..................................................AACGCTCAGGGTGGTTTTACTGTTCAA.............................................................................................................................................................................. 27 2 5 0.20 1 1 0 0 0 0
........................................................CAGGGTGGTTTTTCTGTTC................................................................................................................................................................................ 19 1 20 0.20 4 0 0 4 0 0
..................................................TTAGCTCAGGGTGGTTTTGCTGTTCAA.............................................................................................................................................................................. 27 3 10 0.20 2 0 0 2 0 0
...................................................TTGCTCAGGGTGGTTTTGCTGTTCAA.............................................................................................................................................................................. 26 2 10 0.20 2 2 0 0 0 0
....................................................AGCGCAGGGTGGTTTTCCTGTTCAA.............................................................................................................................................................................. 25 3 5 0.20 1 1 0 0 0 0
............................................TGTGACCACGCTCAGGGTGGTTT........................................................................................................................................................................................ 23 1 5 0.20 1 0 1 0 0 0
....................................................AGCTCAGGGGGGTTTGGCTGTTCAA.............................................................................................................................................................................. 25 3 6 0.17 1 0 1 0 0 0
....................................................TGCTCAGGGTGGTTTTGCTGT.................................................................................................................................................................................. 21 1 6 0.17 1 1 0 0 0 0
..................................................AGCGCTCAGGGTGGTTTTGCTGT.................................................................................................................................................................................. 23 2 6 0.17 1 1 0 0 0 0
..........................................AAGGTGACCACGCTCAGGGTGGTTT........................................................................................................................................................................................ 25 2 6 0.17 1 0 1 0 0 0
...................................................ATGCTCAGGGTGGTTTTGCTGTTCAA.............................................................................................................................................................................. 26 1 6 0.17 1 1 0 0 0 0
....................................................CGCTCACGGTGGTTTTGCCGTTCAA.............................................................................................................................................................................. 25 2 6 0.17 1 0 1 0 0 0
.........................................................AGGGTGGTTTTGCGGTTCAA.............................................................................................................................................................................. 20 1 20 0.15 3 0 3 0 0 0
.......................................................TCAGGGTGGTTTTGCTGTTC................................................................................................................................................................................ 20 0 20 0.15 3 3 0 0 0 0
......................................................CTCAGGGTGGTTTTGCTGTTCAAA............................................................................................................................................................................. 24 0 20 0.15 3 0 3 0 0 0
........................................................CAGGGTGGTTTTGCTGTTCAAAAAC.......................................................................................................................................................................... 25 0 20 0.15 3 0 0 3 0 0
.................................................................TTTGCTGTTCAAAAACAAAGTGCCG................................................................................................................................................................. 25 0 20 0.15 3 3 0 0 0 0
.......................................................TCAGGGTGGTTTTGCTGT.................................................................................................................................................................................. 18 0 20 0.15 3 0 3 0 0 0
...................................................CGGCTCAGGGTGGTTTTGCTGTTCAA.............................................................................................................................................................................. 26 2 7 0.14 1 1 0 0 0 0
.....................................................GATCAGGGTGGTTTTGACGTTCAAA............................................................................................................................................................................. 25 3 7 0.14 1 0 1 0 0 0
....................................................CGTCCAGGGTGGTTTTGATGTTCAA.............................................................................................................................................................................. 25 3 7 0.14 1 0 1 0 0 0
...........................................AAGTGACCACGCTCAGGGTGGTTTT....................................................................................................................................................................................... 25 2 7 0.14 1 1 0 0 0 0
....................................................AGGTCAGGGTGGTTTTGCTGTTCAA.............................................................................................................................................................................. 25 2 7 0.14 1 1 0 0 0 0
..................................................TTCGCTCAGGGTGGTTTTGCTGTTCAA.............................................................................................................................................................................. 27 2 7 0.14 1 1 0 0 0 0
..................................................AATGCTCAGGGTGGTTTTGCTGTTCA............................................................................................................................................................................... 26 2 8 0.13 1 1 0 0 0 0
..................................................ATCGCTCAGGGTGGTTTTGCTGTTCAA.............................................................................................................................................................................. 27 2 9 0.11 1 1 0 0 0 0
...................................................TAGCTCAGGGTGGTTTTGCTGTTCAA.............................................................................................................................................................................. 26 2 9 0.11 1 1 0 0 0 0
....................................................AGTTAAGGGTGGTTTTGCTGTTCAAA............................................................................................................................................................................. 26 3 9 0.11 1 0 1 0 0 0
...................................................CTGCTCAGGGTGGTTTTGCTGTTCAA.............................................................................................................................................................................. 26 2 10 0.10 1 1 0 0 0 0
........................................................CAGGGTGGTTTTTCTGTTCAA.............................................................................................................................................................................. 21 1 20 0.10 2 0 0 2 0 0
....................CCATGATCTGGACACCACTGATTTGGT............................................................................................................................................................................................................ 27 0 20 0.10 2 2 0 0 0 0
...........................................................GGTGGTTTTGCTGTTCAAAAACAAAG...................................................................................................................................................................... 26 0 20 0.10 2 2 0 0 0 0
.......................................................TCAGGGTGGTTTTGGTGTTCAAA............................................................................................................................................................................. 23 1 20 0.10 2 2 0 0 0 0
.......................................................TCAGGGTGGTTTTGCTGTT................................................................................................................................................................................. 19 0 20 0.10 2 2 0 0 0 0
..................................................TTTGCTCAGGGTGGTTTTGCTGTTCAA.............................................................................................................................................................................. 27 3 11 0.09 1 1 0 0 0 0
..................................................ATTGCTCAGGGTGGTTTTGCTGTTCA............................................................................................................................................................................... 26 3 13 0.08 1 1 0 0 0 0
.......................................................TCAGGGTGGTTTTGCTGTTCA............................................................................................................................................................................... 21 0 20 0.05 1 0 1 0 0 0
......................................................CTCAGGGTGGTTTTGCTGTTCAAAAAC.......................................................................................................................................................................... 27 0 20 0.05 1 0 0 1 0 0
...................................................ACGCTCAGTGTGGTGATG...................................................................................................................................................................................... 18 3 20 0.05 1 1 0 0 0 0
.........................................................................................................................................................................AGATGCGTCGCTGTCGAGC............................................................... 19 3 20 0.05 1 1 0 0 0 0
......................................................CTCAGGGTGGTTTTGCGGTTCAAAG............................................................................................................................................................................ 25 2 20 0.05 1 1 0 0 0 0
.........................................................AGGGTGGTTTTGCTGTTC................................................................................................................................................................................ 18 0 20 0.05 1 0 0 0 1 0
...GCCTATAACGGTGGTGTCCATGATCT.............................................................................................................................................................................................................................. 26 0 20 0.05 1 1 0 0 0 0
...........................................................GGGGGTTTTGCTGTTCAAA............................................................................................................................................................................. 19 1 20 0.05 1 0 1 0 0 0
...................TCCATGATCTGGACACCACTGATT................................................................................................................................................................................................................ 24 0 20 0.05 1 1 0 0 0 0
........................................................CAGGGTGGCTTTGCTGTTCAA.............................................................................................................................................................................. 21 1 20 0.05 1 0 0 1 0 0
............................................................................................................ATTACTACATTAACGAAAATAAGTTC..................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0
.........................................................AGGGTGTTCTTGCTGTTCAA.............................................................................................................................................................................. 20 2 20 0.05 1 0 1 0 0 0
.......................................................TCAGGGCGGTTTTGCTGTTCAA.............................................................................................................................................................................. 22 1 20 0.05 1 0 0 1 0 0
........................................................CAGGGTGATTTTGCTGTTCAA.............................................................................................................................................................................. 21 1 20 0.05 1 0 1 0 0 0
.........................................................GGGGTGGTTTTGCTGTTCAAA............................................................................................................................................................................. 21 1 20 0.05 1 0 1 0 0 0
........................................................CAGGGTGGTTTTGCTGTTCAAAAACA......................................................................................................................................................................... 26 0 20 0.05 1 0 0 0 1 0
........................................................CAGGGTGGTTTTGAGGTTCAA.............................................................................................................................................................................. 21 2 20 0.05 1 0 1 0 0 0
........................................................CAGGGGGGTTTTGCTGTTCAA.............................................................................................................................................................................. 21 1 20 0.05 1 0 1 0 0 0
............................................................................................................................................................................................TATCTATCGTTGAGACCGA............................................ 19 3 20 0.05 1 0 0 0 0 1
.........................................................AGGGGGGTTTTGCTGTTCAAAAA........................................................................................................................................................................... 23 1 20 0.05 1 0 1 0 0 0
......................................................CTCAGGGTGGTTTTGCTGTTCAGA............................................................................................................................................................................. 24 1 20 0.05 1 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_535:8873-9123 - dpe_1835 CTCCGGAT---ATTGCCACCACAGGTACTA---------------GACCTGTGG-----TGAC-TAAACCACTGGTGCGAGTCCCACCAAAACGACAAGTTTTTGTTTCACGGCTG-ACTCTGACCTCACATCTCATGATGTAATTGCTTTTATTCAAGCAAATAT---AG-CGT------G---AGTTAAGTGGAGA---------AT-TT-ACTTCTCT-ATGCAGAGATAGCTCGATAGATAGCATCTCTCAC--TCACTGACACATTTGCT---------------CGCGATATGTCGAG------------CATAGTGTGAGAG---T
dp5 Unknown_group_35:34300-34577 - CTGCGGA---TATTGCTACCACAGGTACTA---------------GGCCTGTGG-----TGAC-TAAACCACTGGTGGGAGTCCCACCAAAACGACAAGTTTTTGTTTCACGGCTGGCCCCTGACCTCAAATCGAATCATGTAATTGCTTTTATTCAAAGCTAAATAAAAGCCGT------GGGATTAAAGGTGGAGA---------AATTTAACTTCTCTTAT---------GCCAGGGAGATAGCCTTGTTTAAGATAAGCA-------TCTCCCCAACTCAATTTGCCACCATTTGCTCCACCAAATTTTGGCCGGAGTGAAGGAGTTTA
droWil2 scf2_1100000004967:355539-355793 + TGGGTGACTTGTCC---AACGTTACTACTG---------------TGGCTGCCGCGTCGGGATCGCGGCCTCTAGTTGGCATACCACCAAAGAGAAATATATTTGTTTCTAGGCTAGACCCTGTTGTCACATCTGATGATGTAATAGCCTATATTCGGAAGAAAGTTAACGTCTC------GAATATTGCGGTGGAGA---------AGTTTAAATTTTCTTTT---------TCTCGGGACATTTCGTCCTTTAAAATTAGTG-------TTTCTGCCAATACCTTCGACACTATATGTCGAG-----------------------------
droVir3 scaffold_12728:86153-86356 + TACCGGCTGCTTTAGGTACCACAGCTAATAGTGTTCCCACTGCCCTACCTGTGG-----CGCC-TACGCCTGT---------------------AGTGGGTTTTGTTTCTAGGCTTTCCCCTTACTTCTCATGAGATGGTGTAAAAGCCTTTATACAGGTAAAAATGCAAGCCCC------AGGTATAAAGGTGGGGA---------ATTTTAAACGCGCCTAT---------GAAAAGGATATTGCATCCTTCA------------------------------------------------------------------------------
droAna3 scaffold_13099:1306862-1307046 - CCCCG-TACGTACTGATGCCGCTGTACTAG---------------TTGCGGCGG-----CACC-AAAACCCTTGCAGGTGATCCCACCA-------------TCGTTTCCCGGCTTGCCCCTGATACTTCTGAGATTGATATCTCGGCTTACATCAAAGCCAAA--------------------------GGTGGTGGACATTACAAAATTTAAATATTCATAC---------ACCCGGCAAACGTCATCTTTCA------------------------------------------------------------------------------
droBip1 scf7180000392367:5023-5253 - CACCGGCACCGACTGATGCTGCAGTTCTCG---------------TACCTGGGA-----CCAC-CAACCCCTTACAGGTGATTCCTCCATCGAAACATATATTTGTTTCTCGGCTTGCCCCTGATACTTCAGAGATTGATATCTCGGCTTATATCAAAGCCAAAC--AAAGCCGA---------TATAAAGGTGGAGGACATAACTAAATTTAAATATAATTAT---------ACAAGGCGCACGTCTTCTTTTAAGATTCGTG-------TGCCCGCG------------------------------------------------------
droKik1 scf7180000302550:17724-17949 + CACCGGCTGAAGTTAGTAATG---------------------------CTGCGT-----TACC-AAAGACCCTTACCGCTATTCCTCCACTAAAAACAATATTTCCTTCACGGCT-GCCTCTGATTTCGCATCGCAAGATGTACTTGCCCATATTCAGGACAAAACTCAAGCCGT------AAATGTGAAAGTGAAAA---------AATTTCATTTCTCTTAC---------ACTAGAGACATCTCATCGTTTAAGATC-------------TCCCTCGATATTTTTGACACAAT------------------------------------T
droFic1 scf7180000448464:11183-11454 + TACCGGCTCAAGTTGGTGTTGCAGAAATAC---------------AAACTGTAG-----TGCC-AAAACCCCTTTCAGTGGTTCCACTTAAGAAACAGATTTTCGTTTCTCGGCTTTCCCCTGATCAATCATCATCCGATATACTGTCTTATATACAAGGCAAAACAAAGGCCGA------TAACATTAAAGTGGAAA---------AATTTAACTTTTCTTAC---------GCTCGGGATATTTCATCTTTCAGGATCACTG-------TCCCGGACGAGCTTTTTTCAACCATATGTTCGGGCAATTTTTGGCCGG------ATAG---T
droRho1 scf7180000772786:17045-17266 + AACCGGCTCAAGTTGGTTTTGCAGAAACAA---------------TGTCTGCTC-----CACC-AAAATCCCTTTTAGTGGTTCCACTAAAGAAACAAATTTTCGTTTCTCGGCTTTCCCCTGATCAAACATCTTCTGATGTATTGTCTTATATACAAGACAAAACTAAAGCCGATTGTGATAGTGTAAAGGTGGAAA---------AG-TTAAGTTTTCTTAT---------GCTAGAGACATTTCATCTTTCATT--AACTG---------------------------------------------------------------------
droTak1 scf7180000416013:1311-1510 - TACCGGCACAAGTTGGCGCTGCAGAAACTC---------------AATCTGCAG-----TACC-AA-ACCTCTTTCAGTGGTTCAACCCAAAAAACAAATATTTATTTCTCG-TTTTCGCCTGACCAAACGGCATCCGAGGTATTGGCCTATATACAGCACAAAACAAATGCCAA------AAACATTAAAGTGGAAA---------AGTTTAATTTCACTTAT---------GCGAGGGACACCTC--------------------------------------------------------------------------------------
droEug1 scf7180000407620:3421-3636 - TACCGGCACCCACTGGTAGCGTGGGTAAAC---------------CACCCGCCC-----CGCC-AAAGCCCTTGGTTGGTATTCCTCTAAAAAAACAGATTTTTGTTTCCCGGCTTTCCCCTGATACGTTCGAATCGGATATCTTAGTTTACATTCAAGCAAAACTTAAAGTCGA---------TATTGGGGTGGAAAATATCACTAAGTATAAATATACCTTC---------GCTAGGAACGTGGCATCTTTCA------------------------------------------------------------------------------
dm3 chr3L:23749168-23749417 + TACCGGCACAAGTTGGCACTTCAGAAATAC---------------AATCTGCAG-----GGCCTGCAACCCCTCGCGGTGGTTCCACTAAAGAAACAAATTTTCGTTTCTCGGCTTTCCCCTGATCAAACAT----TGATGTATTGTCTTATATACAAGATAAAACAAAAGCCGA------TAATATAAAAGTGGAAA---------AATTTAACTTATCTTAC---------GCTAGGGACATATCATCTTTCAAGATAACTG-------TCCCATACGAGCTTT-TTCGACCATATGTTAGGG---------------------------T
droSim2 node_23530:534-743 - TACCGGCACAAGTTGGCACTTCAGAAATAC---------------AATCTGCAG-----GGCC-AAAACCGCTCGCGGTGGTTCCACTAAAGAAACAAATTTTCGTTTCTCGGCTTTCCCCTGATCAAACATCATCTGATGTATTGTCTTATATACAAGACAAAACAAAAGCCGA------TAATATAAAAGTGGAAA---------AATTTAACTTCTCTTAC---------GCTAGGGACATATCATCTTTCA------------------------------------------------------------------------------
droSec2 scaffold_67:68260-68519 - TACCGGCACAAGTTGGCGCTTCAGAAATAC---------------AATCTGCAG-----CACC-AAAACCCCTCGCGGTGGTTCCACTAAAGAAACAAATTTTCGTTTCTCGGCTTTCCCCTGATCAAACATTGTCGGATGTATTGTCTTATATACAAAACAAAACAAAAGCCGA------TAATATAAAAGTGGAAA---------AATTTAACTTCTCTTAC---------GCTAGGGACATATCATCTTTCCCA--AA-----------------CGAGCTCTTCTGGACCATATGTTCGGGTGATTTTTGGCGTG------ATAG---T
droYak3 v2_chr2L_random_028:1006693-1006934 + CACCGGCACAATTTGGCTCTACAAATACAC---------------AATCTGCAG-----TGCA-AAAACCCCTCACGGTGGTTCCACTAAATAAACAAATTTTCGTTTCTCGGCTTTCCCATGATCAAACATCATCTGATGT---GCCTTATATATAAGACAAAACAAAAGCCGA------TATCATAAAAGTGGAAA----------ATGTAACTTTTCTTAC---------GCTAGGTACATTTCATCTTTCAAG-TAACTG-------TCCCTATTGAACT------------ATGTTCTTGTGGTA----------------------T

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
CTCCGGAT---ATTGCCACCACAGGTACTA---------------GACCTGTGG-----TGAC-TAAACCACTGGTGCGAGTCCCACCAAAACGACAAGTTTTTGTTTCACGGCTG-ACTCTGACCTCACATCTCATGATGTAATTGCTTTTATTCAAGCAAATAT---AG-CGT------G---AGTTAAGTGGAGA---------AT-TT-ACTTCTCT-ATGCAGAGATAGCTCGATAGATAGCATCTCTCAC--TCACTGACACATTTGCT---------------CGCGATATGTCGAG------------CATAGTGTGAGAG---TSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................................................ACGACAAGTTTTTGTTTCACGG............................................................................................................................................................................................................................22201.05210210000
...........................................................................................ACGACAAGTTTTTGTTTCACGGCTG-A.......................................................................................................................................................................................................................2620.501010000
............TTGCCACCACAGGTACTA---------------GAC.............................................................................................................................................................................................................................................................................................21200.051010000
dp5
CTGCGGA---TATTGCTACCACAGGTACTA---------------GGCCTGTGG-----TGAC-TAAACCACTGGTGGGAGTCCCACCAAAACGACAAGTTTTTGTTTCACGGCTGGCCCCTGACCTCAAATCGAATCATGTAATTGCTTTTATTCAAAGCTAAATAAAAGCCGT------GGGATTAAAGGTGGAGA---------AATTTAACTTCTCTTAT---------GCCAGGGAGATAGCCTTGTTTAAGATAAGCA-------TCTCCCCAACTCAATTTGCCACCATTTGCTCCACCAAATTTTGGCCGGAGTGAAGGAGTTTASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................................................................................TTCACGGCTGGCCCCTGACCTCAA...........................................................................................................................................................................................................24142.004204020000000
..........................................................................................................TTCACGGCTGGCCCCTGACCTCAAA..........................................................................................................................................................................................................25111.001101100000000
..........................................................................................................TTCACGGCTGGCCCCTGAC................................................................................................................................................................................................................19208.35167016700000000
...........................................................................................................TCACGGCTGGCCCCTGACCTCAA...........................................................................................................................................................................................................2315.0050500000000
....................................................................................................................................................................................................................................................................................................CCATTTGCTCCACCAAATTTTGG..................23163.946305940000000
........................................................................................................GTTTCACGGCTGGCCCCTGACCTCAA...........................................................................................................................................................................................................2613.0030300000000
..........................................................................................................TTCACGGCTGGCCCCTGACCTCAAAA.........................................................................................................................................................................................................2623.0060600000000
..........................................................................................................................................................................................................................................................GTTTAAGATAAGCA-------TCTCCCCAACT...................................................25202.404804400000400
...........................................................................................................TCACGGCTGGCCCCTGACCTCA............................................................................................................................................................................................................22202.054104100000000
....................................................................................................................................................................................................................................................................................................CCATTTGCTCCACCAAATTTTGGC.................24161.812902720000000
....................................................................................................................................................................................................................................................................................................CCATTTGCTCCACCAAATTTTGGCC................25151.532302210000000
...........................................................................................................TCACGGCTGGCCCCTGACCT..............................................................................................................................................................................................................20201.352702700000000
........................................................................................................GTTTCACGGCTGGCCCCTGACCTC.............................................................................................................................................................................................................24201.302602600000000
.........................................................................................................................................................................................................................................................TGTTTAAGATAAGCA-------TCTCCCCAA.....................................................2411.0010100000000
.............................................................................................................................................................................GT------GGGATTAAAGGTGGAGA---------AATT..........................................................................................................................2351.0050210000200
...........................................................................................................TCACGGCTGGCCCCTGACCTCAAA..........................................................................................................................................................................................................2411.0010100000000
..........................................................................................................................................................................................................................................................GTTTAAGATAAGCA-------TCTCCCCA......................................................22200.951901800000100
..........................................................................................................TTCACGGCTGGCCCCTGACC...............................................................................................................................................................................................................20200.751500150000000
..........................................................................................................TTCACGGCTGGCCCCTGA.................................................................................................................................................................................................................18200.751501410000000
.....................................................................................................................................................................TAAAAGCCGT------GGGATTAAAGGT............................................................................................................................................2270.7150400100000
..........................................................................................................TTCACGGCTGGCCCCTGACCTCAAAAA........................................................................................................................................................................................................2730.6720200000000
...........................................................................................................................................................................................................................................................TTTAAGATAAGCA-------TCTCCCCA......................................................21200.651301300000000
.............................................................................................................................................................................GT------GGGATTAAAGGTGGAGA---------AAT...........................................................................................................................2250.6030300000000
........................................................................................................GTTTCACGGCTGGCCCCTGACCTCAAAA.........................................................................................................................................................................................................2820.5010100000000
..........................................................................................................TTCACGGCTGGCCCCTGACCTCAAT..........................................................................................................................................................................................................2520.5010100000000
.....................................................................................................................................................................TAAAAGCCGT------GGGATTAAAGGTG...........................................................................................................................................2340.5020200000000
.....................................................................................................................CCCCTGACCTCAAATCGAATCATGTA..............................................................................................................................................................................................2620.5010100000000
..........TATTGCTACCACAGGTACTA---------------GGCCT...........................................................................................................................................................................................................................................................................................2520.5010010000000
..........................................................................................................................................................................................................................TCTTAT---------GCCAGGGAGATAGCCTTGT.................................................................................2520.5010000000010
............................................................................................................................................................................................................................TTAT---------GCCAGGGAGATAGCCTT...................................................................................2120.5010000001000
...........................................................TGAC-TAAACCACTGGTGGGAGTCCCACC.....................................................................................................................................................................................................................................................28200.4590630000000
.................................................TGTGG-----TGAC-TAAACCACTGGTGGGAG............................................................................................................................................................................................................................................................26200.4590900000000
.....................................................................................................................................................................................................................................................................................................CATTTGCTCCACCAAATTTTGGC.................23170.4170700000000
...........................................................TGAC-TAAACCACTGGTGGGAGTCCCA.......................................................................................................................................................................................................................................................26200.4080800000000
.........................TACTA---------------GGCCTGTGG-----TGAC-TAAACCA......................................................................................................................................................................................................................................................................25140.3650400000010
......................................................................................................................................................................................................................................................................................................ATTTGCTCCACCAAATTTTGG..................21170.3560401000100
...........................................................................................................................................................................................................................................................TTTAAGATAAGCA-------TCTCCCCAACTCA.................................................26200.3570610000000
.............................................................................................................................................................................GT------GGGATTAAAGGTGGAGA---------..............................................................................................................................1960.3320000100100
.............................................................................................................................................................................GT------GGGATTAAAGGTGGAGA---------AA............................................................................................................................2160.3320200000000
.............................................................................................................................................................................................................................................................TAAGATAAGCA-------TCTCCCCAACTC..................................................23200.3060510000000
...........................................................TGAC-TAAACCACTGGTGGGAGTCCC........................................................................................................................................................................................................................................................25200.3060600000000
......................................................................................................................................................................AAAAGCCGT------GGGATTAAAGGT............................................................................................................................................2170.2920200000000
.....................................................................................................................................................................TAAAAGCCGT------GGGATTAAAGG.............................................................................................................................................2170.2920100001000
.........................TACTA---------------GGCCTGTGG-----TGAC-TAAACCAC.....................................................................................................................................................................................................................................................................26140.2940100000300
.........................TACTA---------------GGCCTGTGG-----TGAC-TAAAC........................................................................................................................................................................................................................................................................23180.2850500000000
.........................TACTA---------------GGCCTGTGG-----TGAC-TAAACC.......................................................................................................................................................................................................................................................................24150.2740310000000
.....................................................................................................................................................................TAAAAGCCGT------GGGATTAAAGGTGG..........................................................................................................................................2440.2510100000000
...........................................................................................................................................................................................................................................................TTTAAGATAAGCA-------TCTCCCCAA.....................................................22200.2550000100400
......................................................................................................................................................................AAAAGCCGT------GGGATTAAAGGTG...........................................................................................................................................2240.2510100000000
...........................................................................................................................................................................................................................................................TTTAAGATAAGCA-------TCTCCCCAACA...................................................24200.2550500000000
......................................................................................................................................................................AAAAGCCGT------GGGATTAAAGGTGG..........................................................................................................................................2340.2510100000000
.......................................................................................................................................................................................................................................................................................................TTTGCTCCACCAAATTTTGGC.................21170.2440400000000
.........................................................................................................................................................................................................................................................................................................TGCTCCACCAAATTTTGGCCGGA.............23130.2330300000000
...........................................................................................................................................................................................................................................................TTTAAGATAAGCA-------TCTCCCCAACTCAAT...............................................28200.2040040000000
..........................................................................................................TTCACGGCTGGCCCCTGACCTCT............................................................................................................................................................................................................23200.2040400000000
....................................................................................................................................................................................................................................................................................................CCATTTGCTCCACCAAATTTTGGCCG...............26150.2030300000000
............................................................................................................CACGGCTGGCCCCTGACCTCA............................................................................................................................................................................................................21200.2040400000000
...........................................................................................................................................................................................................................................................TTTAAGATAAGCA-------TCTCCCCAACTCAA................................................27200.2040300000100
...........................................................TGAC-TAAACCACTGGTGGGAGTCCCACA.....................................................................................................................................................................................................................................................28200.2040400000000
.............................................................................................................................................................................................................................TAT---------GCCAGGGAGATAGCCT....................................................................................19200.2040400000000
............................................................................................................................................................................CGT------GGGATTAAAGGTGGAGA---------AAT...........................................................................................................................2350.2010100000000
......................................................................................................................................................................................................................................................................................................ATTTGCTCCACCAAATTTTGGCC................23160.1930300000000
......................................................................................................................................................................................................................................................................................................ATTTGCTCCACCAAATTTTGGCCG...............24160.1930300000000
............................TA---------------GGCCTGTGG-----TGAC-TAAACCACTG...................................................................................................................................................................................................................................................................25160.1930200000010
....................................................................................................................................................................................................................................................................................................CCATTTGCTCCACCAAATTTTG...................22160.1930300000000
.....................................................................................................................................................................................................................................................................................................CATTTGCTCCACCAAATTTTGG..................22170.1830300000000
...........................................................................................................................................................................CCGT------GGGATTAAAGGTGG..........................................................................................................................................1860.1710100000000
.....................................................................................................................................................................................................................................................................................................CATTTGCTCCACCAAATTTTGGCCGG..............26120.1720200000000
...........................................................................................................................................................................................................................................................TTTAAGATAAGCA-------TCTCCCCAACTCAATT..............................................29200.1530030000000
..........................................................................................................................................................................................................................TCTTAT---------GCCAGGGAGATAGC......................................................................................20200.1530000003000
...................................................................................................................................................................................................................TAACTTCTCTTAT---------GCCAGGGAGATAG.......................................................................................26200.1530300000000
...........................................................................TGGGAGTCCCACCAAAACGACAAGT.........................................................................................................................................................................................................................................25200.1530300000000
............................................................................................................................................................................................................................................................TTAAGATAAGCA-------TCTCCCCA......................................................20200.1530300000000
...........................................................TGAC-TAAACCACTGGTGGGAGTCCCAC......................................................................................................................................................................................................................................................27200.1530030000000
..........................................................................................AACGACAAGTTTTTGTTTCACGGCTGG........................................................................................................................................................................................................................27200.1530300000000
.....................................................G-----TGAC-TAAACCACTGGTGGGA.............................................................................................................................................................................................................................................................21200.1530300000000
.................................................TGTGG-----TGAC-TAAACCACTGGTGGG..............................................................................................................................................................................................................................................................24200.1530300000000
.........................TACTA---------------GGCCTGTGG-----TGAC-TAAACCACT....................................................................................................................................................................................................................................................................27140.1420000000020
..................................................................................................................................................................AAATAAAAGCCGT------GGGATTAA................................................................................................................................................2170.1410100000000
.......................................................................................................................................................................AAAGCCGT------GGGATTAAAGGT............................................................................................................................................2070.1410000100000
.......................................................................................................................................................................................................................................................................................................TTTGCTCCACCAAATTTTGGCC................22160.1320110000000
....................................................................................................................................................................................................................................................................................................CCATTTGCTCCACCAAATT......................19160.1320200000000
......................................................................................................................................................................................................................................................................................................ATTTGCTCCACCAAATTTTGGC.................22170.1220200000000
..........................ACTA---------------GGCCTGTGG-----TGAC-TAAACCA......................................................................................................................................................................................................................................................................24170.1220200000000
.........................TACTA---------------GGCCTGTGG-----TGAC-TA...........................................................................................................................................................................................................................................................................20200.1020200000000
.........................TACTA---------------GGCCTGTGG-----TGAC-TAAA.........................................................................................................................................................................................................................................................................22200.1020200000000
..........................................................................................................................................................................................................................................................GTTTAAGATAAGCA-------TCTCCCCAA.....................................................23200.1020000000200
..............................................................................................................................................................................................................................................................AAGATAAGCA-------TCTCCCCAACT...................................................21200.1020200000000
...................................................TGG-----TGAC-TAAACCACTGGTGGGAGT...........................................................................................................................................................................................................................................................25200.1020200000000
.......................................................................................................TGTTTCACGGCTGGCCCCTGACCTC.............................................................................................................................................................................................................25200.1020200000000
.....................................................................................................TTTGTTTCACGGCTGGCCCCTGA.................................................................................................................................................................................................................23200.1020200000000
..........................................................................................................................................................................................................................................................GTTTAAGATAAGCA-------TCTCCCC.......................................................21200.1020000000110
..........................................................................................................................................................................................................................TCTTAT---------GCCAGGGAGATAGCCT....................................................................................22200.1020200000000
...........................................................TGAC-TAAACCACTGGTGGGAGTCC.........................................................................................................................................................................................................................................................24200.1020200000000
..........................................................................................................................................................................................TAAAGGTGGAGA---------AATTTAACTTCTCT................................................................................................................26200.1020000000020
...........................................................................TGGGAGTCCCACCAAAACGACAAGTT........................................................................................................................................................................................................................................26200.1020200000000
...........................................................TGAC-TAAACCACTGGTGGGAGTCCCACCA....................................................................................................................................................................................................................................................29200.1020200000000
..............................................................................................................................................................................................................................................................AAGATAAGCA-------TCTCCCCAACTC..................................................22200.1020110000000
..........................................................................................................TTCACGGCTGGCCCCTGAG................................................................................................................................................................................................................19200.1020200000000
............................................................................................................................................................................................................................................................TTAAGATAAGCA-------TCTCCCCAA.....................................................21200.1020200000000
..........................................................................................................................................................................................................................................................................................................GCTCCACCAAATTTTGGCCGG..............21130.0810100000000
.........................TACTA---------------GGCCTGTGG-----TGAC-TAAACCACTGG..................................................................................................................................................................................................................................................................29140.0710100000000
.............................................................................................................................................................................................................................................................................................................CCACCAAATTTTGGCCGGAG............20140.0710100000000
............................TA---------------GGCCTGTGG-----TGAC-TAAACCACTGGTG................................................................................................................................................................................................................................................................28150.0710100000000
....................................................................................................................................................................................................................................................................................................CCATTTGCTCCACCAAAT.......................18160.0610100000000
............................TA---------------GGCCTGTGG-----TGAC-TAAACCACTGG..................................................................................................................................................................................................................................................................26160.0610100000000
.....................................................................................................................................................................................................................................................................................................CATTTGCTCCACCAAATTTTGGCC................24160.0610100000000
...........................CTA---------------GGCCTGTGG-----TGAC-TAAACCACTGG..................................................................................................................................................................................................................................................................27160.0610100000000
.........................................................................................................................................................................................................................................................................................................TGCTCCACCAAATTTTGGCC................20170.0610100000000
....................................................................................................................................................................................................................................................................................................CCATTTGCTCCACCAAATTTTGGA.................24170.0610100000000
.........................................................................................................................................................................................................................................................................................................TGCTCCACCAAATTTTGGCCG...............21170.0610100000000
......................................................................................................................................................................................................................................................................................................ATTTGCTCCACCAAATTTTG...................20170.0610100000000
........................................................................................................................................................................................................................................................................................................TTGCTCCACCAAATTTTG...................18180.0610100000000
........................GTACTA---------------GGCCTGTGG-----TGAC-TA...........................................................................................................................................................................................................................................................................21180.0610100000000
..........................ACTA---------------GGCCTGTGG-----TGAC-TAAACC.......................................................................................................................................................................................................................................................................23180.0610100000000
...........................................................................................................TCACGGCTGGCCCCTGACCTCC............................................................................................................................................................................................................22200.0510100000000
..........................................................................................................................................................................................................................................................GTTTAAGATAAGCA-------TCTCCCCAAC....................................................24200.0510000000010
.....................................................................................................................................................................................................................ACTTCTCTTAT---------GCCAGGGAGATA........................................................................................23200.0510100000000
..............................................................................................................CGGCTGGCCCCTGACCTCA............................................................................................................................................................................................................19200.0510100000000
..............................................GCCTGTGG-----TGAC-TAAACC.......................................................................................................................................................................................................................................................................18200.0510100000000
.....................CAGGTACTA---------------GGCCTGTGG-----..................................................................................................................................................................................................................................................................................18200.0510100000000
..........................................................................................AACGACAAGTTTTTGTTTCACGGCTG.........................................................................................................................................................................................................................26200.0510000000010
................................................................TAAACCACTGGTGGGAGTCCC........................................................................................................................................................................................................................................................21200.0510000010000
.............................................................AC-TAAACCACTGGTGGGAGTCC.........................................................................................................................................................................................................................................................22200.0510000100000
........................................................................................................GTTTCACGGCTGGCCCCTGACCC..............................................................................................................................................................................................................23200.0510010000000
..........................................................................................................................................................................................................................................................GTTTAAGATAAGCA-------TCTCCC........................................................20200.0510001000000
..........................................................................................................................................................................................................................TCTTAT---------GCCAGGGAGATA........................................................................................18200.0510100000000
..........................................................................................................................................................................................................................................................GTTTAAGATAAGCA-------TCTCCCCAACTC..................................................26200.0510010000000
.........................................................................................................TTTCACGGCTGGCCCCTGACC...............................................................................................................................................................................................................21200.0510000100000
........................GTACTA---------------GGCCTGTGG-----TGAC-T............................................................................................................................................................................................................................................................................20200.0510000000100
...................................................TGG-----TGAC-TAAACCACTGGTGG...............................................................................................................................................................................................................................................................21200.0510100000000
.............................................................................................................................................................................................................................................................TAAGATAAGCA-------TCTCCCCAACTCAAT...............................................26200.0510010000000
.........................................................................................................TTTCACGGCTGGCCCCTGAA................................................................................................................................................................................................................20200.0510100000000
.................................................................AAACCACTGGTGGGAGTCCC........................................................................................................................................................................................................................................................20200.0510100000000
..................................................................AACCACTGGTGGGAGTCCCA.......................................................................................................................................................................................................................................................20200.0510000100000
....................................................................................CACCAAAACGACAAGTTTTA.....................................................................................................................................................................................................................................20200.0510100000000
...........................................................TGAC-TAAACCACTGGTGGGAGTCCCT.......................................................................................................................................................................................................................................................26200.0510100000000
......................AGGTACTA---------------GGCCTGTGG-----TGAC-T............................................................................................................................................................................................................................................................................22200.0510100000000
..............................................................C-TAAACCACTGGTGGGAGTC..........................................................................................................................................................................................................................................................20200.0510000100000
.........................................................................................................TTTCACGGCTGGCCCCTGACCT..............................................................................................................................................................................................................22200.0510000001000
..........................................................................................AACGACAAGTTTTTGTTTCACGGCTGGC.......................................................................................................................................................................................................................28200.0510100000000
..................................................................................................................................................................................................................................................................TAAGCA-------TCTCCCCAACTCAATT..............................................22200.0510100000000
...........................................................................................ACGACAAGTTTTTGTTTCACGA............................................................................................................................................................................................................................22200.0510100000000
.................................................................................................................................................................................................................................................................ATAAGCA-------TCTCCCCAACTCA.................................................20200.0510100000000
..................................................GTGG-----TGAC-TAAACCACTGGTGGGAG............................................................................................................................................................................................................................................................25200.0510100000000
........................................................................................................GTTTCACGGCTGGCCCCTGTA................................................................................................................................................................................................................21200.0510100000000
.............................................................................................................................................................................................................................................................TAAGATAAGCA-------TCTCCCCAACTCAA................................................25200.0510100000000
...........................................................................................................................................................................................................................CTTAT---------GCCAGGGAGATAGC......................................................................................19200.0510000100000
..........................................................................................................................................................................................................................................................GTTTAAGATAAGCA-------TCTCCCCAAAA...................................................25200.0510000000010
.............................................................................................GACAAGTTTTTGTTTCACGG............................................................................................................................................................................................................................20200.0510100000000
.............................................................................................................ACGGCTGGCCCCTGACCTCA............................................................................................................................................................................................................20200.0510100000000
.....................CAGGTACTA---------------GGCCTGTGG-----T.................................................................................................................................................................................................................................................................................19200.0510100000000
..........................................................................................................................................................................................................................................................GTTTAAGATAAGCA-------TCTCCCCAAA....................................................24200.0510100000000
...........................................................................................................................................................................................................................................................TTTAAGATAAGCA-------TCTCCCC.......................................................20200.0510000100000
...........................................................................................................................................................................................................................................................TTTAAGATAAGCA-------TCTCCCCAAC....................................................23200.0510000100000
..........................................................................................................TTCACGGCTGGCCCCTGAA................................................................................................................................................................................................................19200.0510010000000
.....................................................................................................................................................................................................................ACTTCTCTTAT---------GCCAGGGAGATAGC......................................................................................25200.0510100000000
................................................CTGTGG-----TGAC-TAAACCACTGGTGGGA.............................................................................................................................................................................................................................................................26200.0510100000000
...........................................................................TGGGAGTCCCACCAAAACGACA............................................................................................................................................................................................................................................22200.0510100000000
...................................................TGG-----TGAC-TAAACCACTGGTGGGAG............................................................................................................................................................................................................................................................24200.0510100000000
..........................................................................................................................................................................................TAAAGGTGGAGA---------AATTTAACTTCTC.................................................................................................................25200.0510000001000
...............................................................................................CAAGTTTTTGTTTCACGGCTGG........................................................................................................................................................................................................................22200.0510100000000
..................................................................................................................................................................................................................................................................TAAGCA-------TCTCCCCAACTCAAT...............................................21200.0510100000000
...........................................................................................................................................................................................................................................................TTTAAGATAAGCA-------TCTCCCCAC.....................................................22200.0510100000000
....................................................................................................................................................................................................................AACTTCTCTTAT---------GCCAGGGAGAT.........................................................................................23200.0510100000000
............................................................................................................................................................................................................................................................TTAAGATAAGCA-------TCTCCCCAACTCA.................................................25200.0510100000000
droWil2
TGGGTGACTTGTCC---AACGTTACTACTG---------------TGGCTGCCGCGTCGGGATCGCGGCCTCTAGTTGGCATACCACCAAAGAGAAATATATTTGTTTCTAGGCTAGACCCTGTTGTCACATCTGATGATGTAATAGCCTATATTCGGAAGAAAGTTAACGTCTC------GAATATTGCGGTGGAGA---------AGTTTAAATTTTCTTTT---------TCTCGGGACATTTCGTCCTTTAAAATTAGTG-------TTTCTGCCAATACCTTCGACACTATATGTCGAG-----------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................................................................................................CCTGTTGTCACATCTGATGATGT...............................................................................................................................................................................................23200.6513013000
.............................................................................................................................................................................TC------GAATATTGCGGTGGAGA---------AG............................................................................................................................21200.20404000
.......................................................................................................................CCTGTTGTCACATCTGATGATGTA..............................................................................................................................................................................................24200.20404000
....................................................................................................................................................................................................................................................TTCGTCCTTTAAAATTAGTG-------TTTCTG........................................................26200.20404000
......................................................................................................................................................................TAACGTCTC------GAATATTGCGGTGGAGA---------..............................................................................................................................26200.15300030
.............................................................................................................TAGGCTAGACCCTGTTGTCACATCTG......................................................................................................................................................................................................26200.15303000
...................................................................................................TATTTGTTTCTAGGCTAGACC.....................................................................................................................................................................................................................21200.15300030
................................................................................................................................ACATCTGATGATGTAATAGCCTA......................................................................................................................................................................................23200.10202000
.................................................................................................................................................................AAAGTTAACGTCTC------GAATATTGCG..............................................................................................................................................24200.10202000
.....................................................................................................................................................................................GAATATTGCGGTGGAGA---------AGTTTAAA......................................................................................................................25200.10200020
..............................................................................................................................................AATAGCCTATATTCGGAAGAA..........................................................................................................................................................................21200.10200200
........................................................................................................................................................................................................................................................TCCTTTAAAATTAGTG-------TTTCTGCCA.....................................................25200.10202000
........................................................................................................................................................ATTCGGAAGAAAGTTAACGTCTC------G.......................................................................................................................................................24200.10202000
........................................................................................................................CTGTTGTCACATCTGATGATGTAA.............................................................................................................................................................................................24200.10200020
...........................................................................................................................................................................................TGCGGTGGAGA---------AGTTTAAATTTTC.................................................................................................................24200.05100010
..................................................................................................................TAGACCCTGTTGTCACATCTGATGATG................................................................................................................................................................................................27200.05100010
........................................................................................................................................................................................TATTGCGGTGGAGA---------AGTTTA........................................................................................................................20200.05100100
.......................................................................................................................................................TATTCGGAAGAAAGTTAACGTCTC------G.......................................................................................................................................................25200.05101000
...................................................................................................................AGACCCTGTTGTCACATCTG......................................................................................................................................................................................................20200.05101000
................................................................................................ATATATTTGTTTCTAGGCT..........................................................................................................................................................................................................................19200.05100100
.................................................................................................................................................................AAAGTTAACGTCTC------GAATATTGCGGTG...........................................................................................................................................27200.05101000
..............................................................................................................................................................AAGAAAGTTAACGTCTC------GAATATTGCGGT............................................................................................................................................29200.05100100
.........................................................................................................................................................................................ATTGCGGTGGAGA---------AGTTTAAATTTTC.................................................................................................................26200.05100100
...........................................................................................................................................................................TCTC------GAATATTGCGGTGGAGA---------..............................................................................................................................21200.05101000
.......................................................................................................................................................................AACGTCTC------GAATATTGCGGT............................................................................................................................................20200.05101000
.................................................................................................................CTAGACCCTGTTGTCACATCTGATGATG................................................................................................................................................................................................28200.05101000
...........................................................................................................TCTAGGCTAGACCCTGTTGTCACATC........................................................................................................................................................................................................26200.05101000
..........................................................................................................................................................TCGGAAGAAAGTTAACGTCTC------........................................................................................................................................................21200.05101000
..........................................................................................................................................................................................TTGCGGTGGAGA---------AGTTTAAATTTTC.................................................................................................................25200.05100010
...............................................................................................................................................................................................................................................................AAATTAGTG-------TTTCTGCCAATA..................................................21200.05101000
.......................................................................................................................................................................................ATATTGCGGTGGAGA---------AGTTTA........................................................................................................................21200.05101000
......................................................................................................................CCCTGTTGTCACATCTGATGAT.................................................................................................................................................................................................22200.05101000
......................................................................................................................................................................................................................................................CGTCCTTTAAAATTAGTG-------TTTCT.........................................................23200.05101000
..........................................................................................................................................................................GTCTC------GAATATTGCGGTGGA.........................................................................................................................................20200.05100001
..........................................................................................................................................................................GTCTC------GAATATTGCGGTGGAGA---------A.............................................................................................................................23200.05101000
.....................................................................................................................................................................................GAATATTGCGGTGGAGA---------AGTTTAAATT....................................................................................................................27200.05100001
..........................................................................................................................................................................................TTGCGGTGGAGA---------AGTTTAAATT....................................................................................................................22200.05100010
.........................................................................................................................................................TTCGGAAGAAAGTTAACGTCT...............................................................................................................................................................21200.05101000
............................................................................................................................................................................................................................................................TTAAAATTAGTG-------TTTCTGCCA.....................................................21200.05100001
..................................................................................................................................ATCTGATGATGTAATAGCCTATA....................................................................................................................................................................................23200.05101000
.............................................................................................................................................................GAAGAAAGTTAACGTCTC------GAATATT.................................................................................................................................................25200.05101000
.......................................................................................................................................ATGATGTAATAGCCTATATTCGGAAGAAA.........................................................................................................................................................................29200.05100100
.....................................................................................................................................................................................GAATATTGCGGTGGAGA---------AGTT..........................................................................................................................21200.05101000
............................................................................................................................................GTAATAGCCTATATTCGGAAGAAA.........................................................................................................................................................................24200.05100100
................................................................................................ATATATTTGTTTCTAGGCTAGACCCT...................................................................................................................................................................................................................26200.05100100
.................................................................................................................................................AGCCTATATTCGGAAGAAA.........................................................................................................................................................................19200.05100100
.............................................................................................................................................................GAAGAAAGTTAACGTCTC------GAA.....................................................................................................................................................21200.05101000
..........................................................................................................TTCTAGGCTAGACCCTGTTGTCAC...........................................................................................................................................................................................................24200.05100010
........................................................................................................................................................ATTCGGAAGAAAGTTAACGTCTC------GA......................................................................................................................................................25200.05100010
..........................................................................................................................................................................GTCTC------GAATATTGCGGTGG..........................................................................................................................................19200.05100100
.....................................................................................................................................................................................GAATATTGCGGTGGAGA---------AGT...........................................................................................................................20200.05101000
.........................................................................................................................................................................................ATTGCGGTGGAGA---------AGTTTAAAT.....................................................................................................................22200.05100100
......................................................................................................................................GATGATGTAATAGCCTATATTCGGA..............................................................................................................................................................................25200.05101000
......................................................................................................................CCCTGTTGTCACATCTGATGA..................................................................................................................................................................................................21200.05101000
......................................................................................................................................................................................AATATTGCGGTGGAGA---------AGT...........................................................................................................................19200.05100100
droVir3
TACCGGCTGCTTTAGGTACCACAGCTAATAGTGTTCCCACTGCCCTACCTGTGG-----CGCC-TACGCCTGT---------------------AGTGGGTTTTGTTTCTAGGCTTTCCCCTTACTTCTCATGAGATGGTGTAAAAGCCTTTATACAGGTAAAAATGCAAGCCCC------AGGTATAAAGGTGGGGA---------ATTTTAAACGCGCCTAT---------GAAAAGGATATTGCATCCTTCA------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................................................................................................CTTACTTCTCATGACC.....................................................................................................................................................................................................16200.051000000000000000000000000000000000000000000000000000000000000001
droAna3
CCCCG-TACGTACTGATGCCGCTGTACTAG---------------TTGCGGCGG-----CACC-AAAACCCTTGCAGGTGATCCCACCA-------------TCGTTTCCCGGCTTGCCCCTGATACTTCTGAGATTGATATCTCGGCTTACATCAAAGCCAAA--------------------------GGTGGTGGACATTACAAAATTTAAATATTCATAC---------ACCCGGCAAACGTCATCTTTCA------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................................CCACCA-------------TCGTTTCCCGGCTTGC.......................................................................................................................................................................................................................2212.002200000
droBip1
CACCGGCACCGACTGATGCTGCAGTTCTCG---------------TACCTGGGA-----CCAC-CAACCCCTTACAGGTGATTCCTCCATCGAAACATATATTTGTTTCTCGGCTTGCCCCTGATACTTCAGAGATTGATATCTCGGCTTATATCAAAGCCAAAC--AAAGCCGA---------TATAAAGGTGGAGGACATAACTAAATTTAAATATAATTAT---------ACAAGGCGCACGTCTTCTTTTAAGATTCGTG-------TGCCCGCG------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
CACCGGCTGAAGTTAGTAATG---------------------------CTGCGT-----TACC-AAAGACCCTTACCGCTATTCCTCCACTAAAAACAATATTTCCTTCACGGCT-GCCTCTGATTTCGCATCGCAAGATGTACTTGCCCATATTCAGGACAAAACTCAAGCCGT------AAATGTGAAAGTGAAAA---------AATTTCATTTCTCTTAC---------ACTAGAGACATCTCATCGTTTAAGATC-------------TCCCTCGATATTTTTGACACAAT------------------------------------TSizeHit CountTotal NormTotal
No Reads
droFic1
TACCGGCTCAAGTTGGTGTTGCAGAAATAC---------------AAACTGTAG-----TGCC-AAAACCCCTTTCAGTGGTTCCACTTAAGAAACAGATTTTCGTTTCTCGGCTTTCCCCTGATCAATCATCATCCGATATACTGTCTTATATACAAGGCAAAACAAAGGCCGA------TAACATTAAAGTGGAAA---------AATTTAACTTTTCTTAC---------GCTCGGGATATTTCATCTTTCAGGATCACTG-------TCCCGGACGAGCTTTTTTCAACCATATGTTCGGGCAATTTTTGGCCGG------ATAG---TSizeHit CountTotal NormTotal
No Reads
droRho1
AACCGGCTCAAGTTGGTTTTGCAGAAACAA---------------TGTCTGCTC-----CACC-AAAATCCCTTTTAGTGGTTCCACTAAAGAAACAAATTTTCGTTTCTCGGCTTTCCCCTGATCAAACATCTTCTGATGTATTGTCTTATATACAAGACAAAACTAAAGCCGATTGTGATAGTGTAAAGGTGGAAA---------AG-TTAAGTTTTCTTAT---------GCTAGAGACATTTCATCTTTCATT--AACTG---------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TACCGGCACAAGTTGGCGCTGCAGAAACTC---------------AATCTGCAG-----TACC-AA-ACCTCTTTCAGTGGTTCAACCCAAAAAACAAATATTTATTTCTCG-TTTTCGCCTGACCAAACGGCATCCGAGGTATTGGCCTATATACAGCACAAAACAAATGCCAA------AAACATTAAAGTGGAAA---------AGTTTAATTTCACTTAT---------GCGAGGGACACCTC--------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
TACCGGCACCCACTGGTAGCGTGGGTAAAC---------------CACCCGCCC-----CGCC-AAAGCCCTTGGTTGGTATTCCTCTAAAAAAACAGATTTTTGTTTCCCGGCTTTCCCCTGATACGTTCGAATCGGATATCTTAGTTTACATTCAAGCAAAACTTAAAGTCGA---------TATTGGGGTGGAAAATATCACTAAGTATAAATATACCTTC---------GCTAGGAACGTGGCATCTTTCA------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
TACCGGCACAAGTTGGCACTTCAGAAATAC---------------AATCTGCAG-----GGCCTGCAACCCCTCGCGGTGGTTCCACTAAAGAAACAAATTTTCGTTTCTCGGCTTTCCCCTGATCAAACAT----TGATGTATTGTCTTATATACAAGATAAAACAAAAGCCGA------TAATATAAAAGTGGAAA---------AATTTAACTTATCTTAC---------GCTAGGGACATATCATCTTTCAAGATAACTG-------TCCCATACGAGCTTT-TTCGACCATATGTTAGGG---------------------------TSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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..................................................................AACCCCTCGCGGTGGTTCCACTAAAG.................................................................................................................................................................................................................................................26200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................AACAAATTTTCGTTTCTCGGCTT.........................................................................................................................................................................................................................23200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................AATTTTCGTTTCTCGGCTTT........................................................................................................................................................................................................................20200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................C---------GCTAGGGACATATCATCTTTC...............................................................................22200.1530000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
....................TCAGAAATAC---------------AATCTGCAG-----GGCC..............................................................................................................................................................................................................................................................................23200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................AAAGCCGA------TAATATAAAAGTGGAAA---------AA............................................................................................................................27200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TCAGAAATAC---------------AATCTGCAG-----G.................................................................................................................................................................................................................................................................................20200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......ACAAGTTGGCACTTCAGAAA..................................................................................................................................................................................................................................................................................................................20200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TTCAGAAATAC---------------AATCTGCAG-----GGG...............................................................................................................................................................................................................................................................................23200.1530000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TTGGCACTTCAGAAATAC---------------AATCTGCA........................................................................................................................................................................................................................................................................................26200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................AAGAAACAAATTTTCGTTTCTCGGCT..........................................................................................................................................................................................................................26200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................ACCCCTCGCGGTGGTTCCACTAAAGAA...............................................................................................................................................................................................................................................27200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................TAAAGAAACAAATTTTCGTTTCTCGGC...........................................................................................................................................................................................................................27200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................ACTTCAGAAATAC---------------AATCTGCAG-----GGC...............................................................................................................................................................................................................................................................................25200.1530000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................CTTAC---------GCTAGGGACATATCATCTTT................................................................................25200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CAGAAATAC---------------AATCTGCAG-----GGCC..............................................................................................................................................................................................................................................................................22200.1530000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TACCGGCACAAGTTGGCACTTC.......................................................................................................................................................................................................................................................................................................................22200.1530000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
......................................................................................................................................................................................AATATAAAAGTGGAAA---------AATTTAACT.....................................................................................................................25200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................CATATCATCTTTCAAGATAACTG-------TCCC..........................................................27200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................AACAAATTTTCGTTTCTCGGC...........................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CACTTCAGAAATAC---------------AATCTGCAG-----GGCC..............................................................................................................................................................................................................................................................................27200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TTGGCACTTCAGAAATAC---------------AATCTGCAG-----G.................................................................................................................................................................................................................................................................................28200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CACAAGTTGGCACTTCAGAA...................................................................................................................................................................................................................................................................................................................20200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................AAAAGCCGA------TAATATAAAAGT............................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.........................................................................................AAGAAACAAATTTTCGTTTCTCGGCTT.........................................................................................................................................................................................................................27200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................TTTTCGTTTCTCGGCTTTCCCCTG..................................................................................................................................................................................................................24200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............GGCACTTCAGAAATAC---------------AATCTGCAG-----G.................................................................................................................................................................................................................................................................................26200.1530000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000000000000000
....................................................................................................TTTCGTTTCTCGGCTTTCCCC....................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................CCGA------TAATATAAAAGTGGAAA---------AATT..........................................................................................................................25200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................TAGGGACATATCATCTTTCAAGAT..........................................................................24200.1530000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................TGGTTCCACTAAAGAAACAAATTTTCG....................................................................................................................................................................................................................................27200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................TCGTTTCTCGGCTTTCCCCTGATC...............................................................................................................................................................................................................24200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................CATATCATCTTTCAAGATAACTG-------TC............................................................25200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................ACCCCTCGCGGTGGTTCCACTAAAG.................................................................................................................................................................................................................................................25200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000200010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................GA------TAATATAAAAGTGGAAA---------AATTTAACT.....................................................................................................................28200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................TCGGCTTTCCCCTGATCAAACAT----TG...................................................................................................................................................................................................2580.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CGGCACAAGTTGGCACTTCAGAAATAC---------------A...............................................................................................................................................................................................................................................................................................28200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................CAAAAGCCGA------TAATATAAAAGTGGAA........................................................................................................................................26200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AGAAATAC---------------AATCTGCAG-----GGCC..............................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..............................................................................................................................................................................................................................AC---------GCTAGGGACATATCATCTT.................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000010000000000000000000000000000000000
.......................................................................CTCGCGGTGGTTCCACTAAAGAAACA............................................................................................................................................................................................................................................26200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................TAAAGAAACAAATTTTCGTTT.................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
....................................................................................................TTTCGTTTCTCGGCTTTCCCCTGATC...............................................................................................................................................................................................................26200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................GCCGA------TAATATAAAAGTGG..........................................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000
..............GGCACTTCAGAAATAC---------------AATCTGCAG-----..................................................................................................................................................................................................................................................................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................TTCCACTAAAGAAACAAATTTTCGTTA.................................................................................................................................................................................................................................27200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CAAGTTGGCACTTCAGAAATAC---------------................................................................................................................................................................................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TACCGGCACAAGTTGGCACTTCAGAAATAC---------------AATCTGCAG-----GGCC-AAAACCGCTCGCGGTGGTTCCACTAAAGAAACAAATTTTCGTTTCTCGGCTTTCCCCTGATCAAACATCATCTGATGTATTGTCTTATATACAAGACAAAACAAAAGCCGA------TAATATAAAAGTGGAAA---------AATTTAACTTCTCTTAC---------GCTAGGGACATATCATCTTTCA------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................................GCCGA------TAATATAAAAGTGGAAA---------AATT..........................................................................................................................26186.78122000200188221456020000
.....................................................................................................................................................................CAAAAGCCGA------TAATATAAAAGTGGA.........................................................................................................................................25195.8411100010015064713092000
.....................................................................................................................CCCCTGATCAAACATCATCTGATGTAT.............................................................................................................................................................................................2764.5027000000123003000000
..........................................................................................................................................................................GCCGA------TAATATAAAAGTGGAAA---------AA............................................................................................................................24203.85770001510201318010000
...........................................................................................................................................................CAAGACAAAACAAAAGCCGA------T.......................................................................................................................................................21203.2565000065000000000000
..................................................................................................................................................TCTTATATACAAGACAAAACAAA....................................................................................................................................................................23203.0561000061000000000000
..........................................................................................................................................................................GCCGA------TAATATAAAAGTGGAAA---------A.............................................................................................................................23203.0561000005110035010000
.....................................................................................................................................................................CAAAAGCCGA------TAATATAAA...............................................................................................................................................19202.8557000057000000000000
..........................................................................................................................................................................GCCGA------TAATATAAAAGTGGA.........................................................................................................................................20202.8056000053020100000000
........................................................................TCGCGGTGGTTCCACTAAA..................................................................................................................................................................................................................................................19202.8056000056000000000000
..........................................................................................................................................................................GCCGA------TAATATAAAAGTGGAA........................................................................................................................................21202.6553000052000001000000
.....................................................................................................................................................................CAAAAGCCGA------TAATATAAAAGTGG..........................................................................................................................................24192.6350000100807000259000
........................................................................TCGCGGTGGTTCCACTAAAGAAACA............................................................................................................................................................................................................................................25202.6052000052000000000000
...................................................................................................................................................................................................................TAACTTCTCTTAC---------GCTAGGGAC...........................................................................................22202.3547000045000002000000
.................................................................................................................................................................................................................TTTAACTTCTCTTAC---------GCTAG...............................................................................................20202.3547000047000000000000
..............................................................................TGGTTCCACTAAAGAAACAAATTTTCGTT..................................................................................................................................................................................................................................29152.27340000001651300000000
..........................................................................................................................................................................GCCGA------TAATATAAAAGTGGAAA---------AAT...........................................................................................................................25202.1543000300245622010000
.......................................................................................................................................................................................................................TTCTCTTAC---------GCTAGGGACATATCATC...................................................................................26202.1042000041000001000000
..............................................................................TGGTTCCACTAAAGAAACAAATTTTCGT...................................................................................................................................................................................................................................28151.8728000100115620111000
.....................................................................................................TTCGTTTCTCGGCTTTCCCC....................................................................................................................................................................................................................20201.7034000034000000000000
...................................................................................................................................................................................................................TAACTTCTCTTAC---------GCTAGGGA............................................................................................21201.40280000001800010000000
TACCGGCACAAGTTGGCACTTCAGAAAT.................................................................................................................................................................................................................................................................................................................28171.2922000100000000201000
.....................................................................................................................CCCCTGATCAAACATCATCTGAT.................................................................................................................................................................................................2391.2211000010001000000000
.............TGGCACTTCAGAAATAC---------------AATCTGCA........................................................................................................................................................................................................................................................................................25141.211700000013210091000
.....................................................................................................................................................................CAAAAGCCGA------TAATATAAAAGTGGAAA---------..............................................................................................................................27181.1721000100000000146000
............................AC---------------AATCTGCAG-----GGCC-AAAACC.......................................................................................................................................................................................................................................................................21201.1523001000000000139000
.............TGGCACTTCAGAAATAC---------------AATCTGC.........................................................................................................................................................................................................................................................................................24141.141600000053300050000
....................................................................................................................TCCCCTGATCAAACATCA.......................................................................................................................................................................................................1891.1110000001000000000000
.....................................................................................................................................................................CAAAAGCCGA------TAATATAAAAGTGGAA........................................................................................................................................26181.0619000200102000113000
...........................TAC---------------AATCTGCAG-----GGCC-AAAACCGCTCGC.................................................................................................................................................................................................................................................................2811.00100000010000000000
.....................................................................................................................CCCCTGATCAAACATCATCTGATGT...............................................................................................................................................................................................2571.00700000001006000000
...................................................................................................................................................................................................................TAACTTCTCTTAC---------GCTAGGGACA..........................................................................................23201.002000060020009030000
....................................................................................................................TCCCCTGATCAAACATCATCTGAT.................................................................................................................................................................................................2491.00900030060000000000
............................AC---------------AATCTGCAG-----GGCC-AAAACA.......................................................................................................................................................................................................................................................................21200.9519000000000000109000
.........................................................................................................................TGATCAAACATCATCTGATG................................................................................................................................................................................................20110.9110000010000000000000
............................AC---------------AATCTGCAG-----GGCC-AAAAC........................................................................................................................................................................................................................................................................20200.9018000000000000711000
....................................................................................................................TCCCCTGATCAAACATCATCTGA..................................................................................................................................................................................................2390.89800000042020000000
TACCGGCACAAGTTGGCACTTCAGAAA..................................................................................................................................................................................................................................................................................................................27170.761300000020500060000
.....................................................................................................................................................................CAAAAGCCGA------TAATATAAAAGTGGAAA---------A.............................................................................................................................28180.721300000000000085000
......................................................................................................................................TCTGATGTATTGTCTTATATACAAGA.............................................................................................................................................................................2670.71500000001400000000
TACCGGCACAAGTTGGCACTTCAGAA...................................................................................................................................................................................................................................................................................................................26170.6511000000000000101000
..........................................................................................................................................................................GCCGA------TAATATAAAAGTGGAAA---------AATTT.........................................................................................................................27180.611100000010208000000
..........................................................................................................................................................................GCCGA------TAATATAAAAGT............................................................................................................................................17200.6012000000000012000000
.................................................................................................................................................................................................................TTTAACTTCTCTTAC---------GCTAGGGA............................................................................................23200.601200000072012000000
............................AC---------------AATCTGCAG-----GGCC-AAAAA........................................................................................................................................................................................................................................................................20200.551100000000000047000
..........................................................................................................................................................................................................................TCTTAC---------GCTAGGGACATATCATCTTT................................................................................26200.551100000010401050000
......................................................................................................................CCCTGATCAAACATCATCTGATGTAT.............................................................................................................................................................................................2660.50300000021000000000
....................................................................................................................TCCCCTGATCAAACATCATCTGATGTAT.............................................................................................................................................................................................2860.50300000021000000000
....................................................................................................................TCCCCTGATCAAACATCATCTGATGTATT............................................................................................................................................................................................2960.50300000030000000000
..................................................................................................................................................................................................................TTAACTTCTCTTAC---------GCTAGGGA............................................................................................22200.45900000023031000000
.....................................................................................................................CCCCTGATCAAACATCATCTGATGTA..............................................................................................................................................................................................2670.43300010001001000000
.................................................................................TTCCACTAAAGAAACAAATTTTCGTT..................................................................................................................................................................................................................................26170.41700000012310000000
....................TCAGAAATAC---------------AATCTGCAG-----GGCC-A............................................................................................................................................................................................................................................................................24200.40800000000005030000
....................TCAGAAATAC---------------AATCTGCAG-----GGC...............................................................................................................................................................................................................................................................................22200.40800600001100000000
.....................................................................................................................CCCCTGATCAAACATCATCTGATG................................................................................................................................................................................................2480.38300000003000000000
..........................................................................................................................GATCAAACATCATCTGATGTAT.............................................................................................................................................................................................2280.38300000000003000000
TACCGGCACAAGTTGGCACTTCAGA....................................................................................................................................................................................................................................................................................................................25190.37700010000310020000
............................AC---------------AATCTGCAG-----GGCC-AAAAAA.......................................................................................................................................................................................................................................................................21200.35700000000000052000
...................................................................................................TTTTCGTTTCTCGGCTTTCCCCTGA.................................................................................................................................................................................................................25200.35700000004030000000
...................................................................................................................................TCATCTGATGTATTGTCTTATATACAAGA.............................................................................................................................................................................2960.33200000001100000000
..................................................................................................................TTTCCCCTGATCAAACATCATCTGA..................................................................................................................................................................................................2590.33300010001010000000
.....................................................................................................................CCCCTGATCAAACATCATCTGA..................................................................................................................................................................................................2290.33300000001110000000
....................TCAGAAATAC---------------AATCTGCAG-----GGCC-AA...........................................................................................................................................................................................................................................................................25200.30600000000000060000
..........................................................................................................................................................................................................................TCTTAC---------GCTAGGGACATATCATCTT.................................................................................25200.30600000000000042000
.......................................................................................................................CCTGATCAAACATCATCTGATGTATT............................................................................................................................................................................................2670.29200000000110000000
............................................................................................................................TCAAACATCATCTGATGTATTGTC.........................................................................................................................................................................................2470.29200000000002000000
....................TCAGAAATAC---------------AATCTGCAG-----GGCC-AAA..........................................................................................................................................................................................................................................................................26200.25500010000103000000
TACCGGCACAAGTTGGCACT.........................................................................................................................................................................................................................................................................................................................20200.25500010000003001000
.....................................................................................................................................................................CAAAAGCCGA------TAATATAAAAGTG...........................................................................................................................................23200.25500000000000023000
...................................................................................................................TTCCCCTGATCAAACATCATCTGATG................................................................................................................................................................................................2680.25200020000000000000
.........................................................................CGCGGTGGTTCCACTAAAGAAACAA...........................................................................................................................................................................................................................................25200.25500000000000032000
....................................................................................................................................................TTATATACAAGACAAAACAAAAGCCGA------........................................................................................................................................................27200.25500000000140000000
.........................................................................CGCGGTGGTTCCACTAAAGAAACAAA..........................................................................................................................................................................................................................................26200.25500000030100010000
....................TCAGAAATAC---------------AATCTGCAG-----GGCC-AAAAC........................................................................................................................................................................................................................................................................28200.25500010000000040000
............TTGGCACTTCAGAAATAC---------------AATCTGC.........................................................................................................................................................................................................................................................................................25140.21300000012000000000
....................TCAGAAATAC---------------AATCTGCAG-----GGCC-.............................................................................................................................................................................................................................................................................23200.20400000000003010000
.....................................................................................................................CCCCTGATCAAACATC........................................................................................................................................................................................................16200.20400000000004000000
...................TTCAGAAATAC---------------AATCTGCAG-----GGCC-A............................................................................................................................................................................................................................................................................25200.20400000000004000000
.......................................................................................TAAAGAAACAAATTTTCGTTTCTCGGC...........................................................................................................................................................................................................................27200.20400000031000000000
....................................................................................CACTAAAGAAACAAATTTTCGTTTC................................................................................................................................................................................................................................25200.20400000030100000000
...CGGCACAAGTTGGCACTTCAGAAA..................................................................................................................................................................................................................................................................................................................24170.18300000000300000000
.................................................................................................................................CATCATCTGATGTATTGTCTTATAT...................................................................................................................................................................................2560.17100000000010000000
..................................................................................................................................ATCATCTGATGTATTGTCTTATATACA................................................................................................................................................................................2760.17100000000100000000
..................................................................................................................................ATCATCTGATGTATTGTCTTATATA..................................................................................................................................................................................2560.17100000001000000000
..........................................................................................................TTCTCGGCTTTCCCCTGATCAAACATCA.......................................................................................................................................................................................................2860.17100000000000010000
..........................................................................................................TTCTCGGCTTTCCCCTGATCAAACATCAA......................................................................................................................................................................................................2960.17100000000000010000
...................................................................................................................................TCATCTGATGTATTGTCTTATATA..................................................................................................................................................................................2460.17100000001000000000
.....................................................................................................................CCCCTGATCAAACATCATCTGATGTATT............................................................................................................................................................................................2860.17100000001000000000
TACCGGCACAAGTTGGCACTTCA......................................................................................................................................................................................................................................................................................................................23190.16300000000000021000
.................ACTTCAGAAATAC---------------AATCTGCAG-----GGC...............................................................................................................................................................................................................................................................................25130.15200000001010000000
.............................................................................................AACAAATTTTCGTTTCTCGGCTTT........................................................................................................................................................................................................................24200.15300000001100010000
............................................................................................AAACAAATTTTCGTTTCTCGG............................................................................................................................................................................................................................21200.15300010000100010000
........................................................................TCGCGGTGGTTCCACTAAAGAAACAAA..........................................................................................................................................................................................................................................27200.15300000000011010000
.................................................................................................................................................................................................................TTTAACTTCTCTTAC---------GCTAGGG.............................................................................................22200.15300000001002000000
..........................................................................................................................................................................GCCGA------TAATATAAAAGTGGAAA---------..............................................................................................................................22200.15300000000003000000
...................................................................................................................................................................................................................TAACTTCTCTTAC---------GCTAGGGACATA........................................................................................25200.15300000000003000000
..........................................................................................................TTCTCGGCTTTCCCCTGATCAAACA..........................................................................................................................................................................................................25200.15300110000000010000
...................................................................................................................................................................................................................TAACTTCTCTTAC---------GCTAGGGACATATC......................................................................................27200.15300010000002000000
.............................................................................................................................................................................GA------TAATATAAAAGTGGAAA---------AAT...........................................................................................................................22200.15300000000003000000
...................TTCAGAAATAC---------------AATCTGCAG-----GGC...............................................................................................................................................................................................................................................................................23200.15300000000012000000
....................................................................................................TTTCGTTTCTCGGCTTTCCCCTGA.................................................................................................................................................................................................................24200.15300000001001010000
.............................................................................................................TCGGCTTTCCCCTGATCAAACATCATC.....................................................................................................................................................................................................2770.14100000001000000000
.................ACTTCAGAAATAC---------------AATCTGCAG-----GG................................................................................................................................................................................................................................................................................24140.14200000001100000000
........................................................................................................................................TGATGTATTGTCTTATATACAAGACAA..........................................................................................................................................................................2770.14100000000000010000
...........................................................................................................................ATCAAACATCATCTGATGTATTGTC.........................................................................................................................................................................................2570.14100000000010000000
....................................................................................................................TCCCCTGATCAAACATCATCTGATGT...............................................................................................................................................................................................2670.14100000010000000000
............TTGGCACTTCAGAAATAC---------------AATCTGCA........................................................................................................................................................................................................................................................................................26140.14200000010010000000
.......................................................................................................................CCTGATCAAACATCATCTGATGTAT.............................................................................................................................................................................................2570.14100000010000000000
........................................................................................................................................TGATGTATTGTCTTATATACAAGA.............................................................................................................................................................................2470.14100000000100000000
................................................................................................................GCTTTCCCCTGATCAAACATCATCTGA..................................................................................................................................................................................................2780.13100000000100000000
..............................................................................TGGTTCCACTAAAGAAACAAATTTTCG....................................................................................................................................................................................................................................27160.13200000010001000000
....................................................................................................................TCCCCTGATCAAACATCATCTGATGA...............................................................................................................................................................................................2680.13100000000010000000
...................................................................................................................................TCATCTGATGTATTGTCT........................................................................................................................................................................................1880.13100000000001000000
.......................................................................................................CGTTTCTCGGCTTTCCCCTGATCAAACA..........................................................................................................................................................................................................28170.12200200000000000000
.ACCGGCACAAGTTGGCACTTCAGAAAT.................................................................................................................................................................................................................................................................................................................27170.12200000000000020000
..................................................................................TCCACTAAAGAAACAAATTTTCGTT..................................................................................................................................................................................................................................25170.12200000002000000000
TACCGGCACAAGTTGGCACTTCAGAAAA.................................................................................................................................................................................................................................................................................................................28170.12200000000000020000
.....................................................................................................................CCCCTGATCAAACATCATCTGATA................................................................................................................................................................................................2490.11100000000010000000
.................................................................................................................CTTTCCCCTGATCAAACATCATCTGA..................................................................................................................................................................................................2690.11100000000100000000
.....................................................................................................................................................................CAAAAGCCGA------TAATATAAAAGTGGAAA---------T.............................................................................................................................28180.11200000000000002000
.....................................................................................................................CCCCTGATCAAACATCATCTG...................................................................................................................................................................................................2190.11100000000010000000
.....................................................................................................................................................................CAAAAGCCGA------TAATATAAAAGTGGAAA---------AA............................................................................................................................29180.11200010000000001000
...................................................................................................................TTCCCCTGATCAAACATCATC.....................................................................................................................................................................................................2190.11100000000001000000
.......................................................................................................................................................................................ATATAAAAGTGGAAA---------AA............................................................................................................................17200.10200000000002000000
............................AC---------------AATCTGCAG-----GGCC-AT...........................................................................................................................................................................................................................................................................17200.10200000000000002000
..........................................................................................................................................................................GCCGA------TAATATAAAAG.............................................................................................................................................16200.10200000010001000000
.......................................................................................................................................................................................................................TTCTCTTAC---------GCTAGGGA............................................................................................17200.10200000000002000000
....................TCAGAAATAC---------------AATCTGCAG-----GGCC-AAAA.........................................................................................................................................................................................................................................................................27200.10200000010001000000
..........................................................................................................TTCTCGGCTTTCCCCTGATCAAACAA.........................................................................................................................................................................................................26200.10200000000000002000
...................TTCAGAAATAC---------------AATCTGCAG-----GGCC-.............................................................................................................................................................................................................................................................................24200.10200000000002000000
........................................................................................................................................................................AAGCCGA------TAATATAAAAGTGGA.........................................................................................................................................22200.10200000011000000000
..............................................................................TGGTTCCACTAAAGAAACAAATTTT......................................................................................................................................................................................................................................25200.10200000000001010000
...................................................................................................TTTTCGTTTCTCGGCTTTCCCCTGATC...............................................................................................................................................................................................................27200.10200000000110000000
.........................................................................................AAGAAACAAATTTTCGTTTCTCGGCT..........................................................................................................................................................................................................................26200.10200000001001000000
.....................................................................................................................................................................................TAATATAAAAGTGGAAA---------AATTTAACT.....................................................................................................................26200.10200000011000000000
............................AC---------------AATCTGCAG-----GGCC-AAAA.........................................................................................................................................................................................................................................................................19200.10200000000000020000
..........................................................................................................................................................................GCCGA------TAATATAAAAGA............................................................................................................................................17200.10200000000200000000
.......................GAAATAC---------------AATCTGCAG-----GGC...............................................................................................................................................................................................................................................................................19200.10200000000002000000
........................................................................................................GTTTCTCGGCTTTCCCCTGATCAAACA..........................................................................................................................................................................................................27200.10200000000200000000
....................................................................................CACTAAAGAAACAAATTTTCGTTTCT...............................................................................................................................................................................................................................26200.10200000000200000000
.................................................................................TTCCACTAAAGAAACAAATTTT......................................................................................................................................................................................................................................22200.10200000000000020000
...........................................................................................................TCTCGGCTTTCCCCTGATCAAACA..........................................................................................................................................................................................................24200.10200110000000000000
....................................................................................................................TCCCCTGATCAAACATC........................................................................................................................................................................................................17200.10200000000002000000
....................TCAGAAATAC---------------AATCTGCAG-----GGCT-TT...........................................................................................................................................................................................................................................................................25200.10200000000001010000
..........................................................................................................................................................................................TAAAAGTGGAAA---------AATTTAACT.....................................................................................................................21200.10200000000200000000
TACCGGCACAAGTTGGC............................................................................................................................................................................................................................................................................................................................17200.10200000000002000000
....................TCAGAAATAC---------------AATCTGCAG-----GGCC-T............................................................................................................................................................................................................................................................................24200.10200000000001010000
..........................................................................GCGGTGGTTCCACTAAAGAAACAAATT........................................................................................................................................................................................................................................27200.10200000000000020000
...................................................................................CCACTAAAGAAACAAATTTTCGTT..................................................................................................................................................................................................................................24200.10200000011000000000
...................TTCAGAAATAC---------------AATCTGCAG-----GGCC-AAAA.........................................................................................................................................................................................................................................................................28200.10200000000000020000
............................AC---------------AATCTGCAG-----GGCC-AAAAG........................................................................................................................................................................................................................................................................20200.10200000000000002000
........................................................................................................................CTGATCAAACATCATCTGAT.................................................................................................................................................................................................20120.08100000001000000000
.............TGGCACTTCAGAAATAC---------------AATCTGCAG-----G.................................................................................................................................................................................................................................................................................27140.07100000001000000000
...............GCACTTCAGAAATAC---------------AATCTGCAG-----GG................................................................................................................................................................................................................................................................................26140.07100000000100000000
.................ACTTCAGAAATAC---------------AATCTGCAG-----G.................................................................................................................................................................................................................................................................................23150.07100000000001000000
.............TGGCACTTCAGAAATAC---------------AATCTG..........................................................................................................................................................................................................................................................................................23150.07100000000000010000
........CAAGTTGGCACTTCAGAAATAC---------------AATC............................................................................................................................................................................................................................................................................................26160.06100000000000001000
...............................................................................GGTTCCACTAAAGAAACAAATTTTCGTT..................................................................................................................................................................................................................................28160.06100000010000000000
TACCGGCACAAGTTGGCACTTCAGATT..................................................................................................................................................................................................................................................................................................................27170.06100000000000010000
..CCGGCACAAGTTGGCACTTCAGAAA..................................................................................................................................................................................................................................................................................................................25170.06100000000100000000
......CACAAGTTGGCACTTCAGAAATAC---------------AA..............................................................................................................................................................................................................................................................................................26170.06100000001000000000
.................................................................................TTCCACTAAAGAAACAAATTTTCGTTTC................................................................................................................................................................................................................................28170.06100000000100000000
..............................................................................TGGTTCCACTAAAGAAACAAATTTTCGA...................................................................................................................................................................................................................................28170.06100000000000001000
.................................................................................TTCCACTAAAGAAACAAATTTTCGT...................................................................................................................................................................................................................................25170.06100010000000000000
..................................................................................TCCACTAAAGAAACAAATTTTCGTTTA................................................................................................................................................................................................................................27170.06100000000010000000
..................................................................................TCCACTAAAGAAACAAATTTTCGT...................................................................................................................................................................................................................................24170.06100000000000001000
.................................................................................................................................................................AAAACAAAAGCCGA------TAATATAAAAGTGGA.........................................................................................................................................29180.06100000001000000000
......................................................................................................................................................................AAAAGCCGA------TAATATAAAAGTGGAAC---------..............................................................................................................................26180.06100000010000000000
..........................................................................................................................................................................GCCGA------TAATATAAAAGTGGAAA---------AATTTAACT.....................................................................................................................31180.06100000010000000000
.......ACAAGTTGGCACTTCAGAAATAC---------------AA..............................................................................................................................................................................................................................................................................................25180.06100000000000010000
....................................................................................................................................................................ACAAAAGCCGA------TAATATAAAAGTGGA.........................................................................................................................................26180.06100000010000000000
....GGCACAAGTTGGCACTTCAGAAATAC---------------A...............................................................................................................................................................................................................................................................................................27180.06100000000000001000
......................................................................................................................................................................AAAAGCCGA------TAATATAAAAGTGGAA........................................................................................................................................25180.06100000000100000000
.......................................................................................TAAAGAAACAAATTTTCGTTTCTCGGCT..........................................................................................................................................................................................................................28190.05100000000100000000
..........................................................................GCGGTGGTTCCACTAAAGAAACAAATTT.......................................................................................................................................................................................................................................28190.05100000000000010000
.....................................................................................................................................................................CAAAAGCCGA------TAATATAAAAGTGGAAA---------AT............................................................................................................................29190.05100000000000001000
.....................................................................................................................................................................CAAAAGCCGA------TAATATAAAAGTGGAAT---------..............................................................................................................................27190.05100000000000010000
TACCGGCACAAGTTGGCACTTCAT.....................................................................................................................................................................................................................................................................................................................24190.05100000000000010000
TACCGGCACAAGTTGGCACTTC.......................................................................................................................................................................................................................................................................................................................22190.05100000000000010000
......................................................................................................................................................................AAAAGCCGA------TAATATAAAAGTGGA.........................................................................................................................................24190.05100000010000000000
.........................AATAC---------------AATCTGCAG-----GGCC-AAAACCA......................................................................................................................................................................................................................................................................25190.05100000000000010000
...CGGCACAAGTTGGCACTTCAC.....................................................................................................................................................................................................................................................................................................................21190.05100000000000010000
........................................................................................................................................................................................TATAAAAGTGGAAA---------AATTTAACTT....................................................................................................................24200.05100000001000000000
......................................................................................................................................................................................................................CTTCTCTTAC---------GCTAGGGACA..........................................................................................20200.05100000000001000000
...................................................................................................................................................................................................................TAACTTCTCTTAC---------GCTAGGGACAT.........................................................................................24200.05100000000001000000
..........................................................................................................TTCTCGGCTTTCCCCTGATCAAACATC........................................................................................................................................................................................................27200.05100010000000000000
........................................................................TCGCGGTGGTTCCACTAAAG.................................................................................................................................................................................................................................................20200.05100000000001000000
...........................TAC---------------AATCTGCAG-----GGCC-AAAACC.......................................................................................................................................................................................................................................................................22200.05100000000000010000
...........................TAC---------------AATCTGCAG-----GGCC-AAAACA.......................................................................................................................................................................................................................................................................22200.05100000000000010000
....GGCACAAGTTGGCACTTCAGA....................................................................................................................................................................................................................................................................................................................21200.05100000001000000000
...................................................................................................................................................................................................................TAACTTCTCTTAC---------GCTAGGA.............................................................................................20200.05100000000100000000
.....................................................................................................TTCGTTTCTCGGCTTTCCCCTGATCA..............................................................................................................................................................................................................26200.05100000010000000000
......................AGAAATAC---------------AATCTGCAG-----GGCC-AAA..........................................................................................................................................................................................................................................................................24200.05100000000001000000
...................TTCAGAAATAC---------------AATCTGCAG-----GGCA-.............................................................................................................................................................................................................................................................................24200.05100000000001000000
..CCGGCACAAGTTGGCACT.........................................................................................................................................................................................................................................................................................................................18200.05100100000000000000
.....................................................................................................................................................TATATACAAGACAAAACAAAAGCCGA------TAT.....................................................................................................................................................29200.05100000000000010000
........................................................................................AAAGAAACAAATTTTCGTTTCTCGGCT..........................................................................................................................................................................................................................27200.05100000010000000000
....................TCAGAAATAC---------------AATCTGCAG-----GGCC-AT...........................................................................................................................................................................................................................................................................25200.05100000000001000000
...................................................................................................TTTTCGTTTCTCGGCTTTCCC.....................................................................................................................................................................................................................21200.05100000000000001000
..........................................................................................................................................................................................................................TCTTAC---------GCTAGGGACATATCATCT..................................................................................24200.05100000000000010000
....................TCAGAAATAC---------------AATCTGCAG-----GGCC-AAAACA.......................................................................................................................................................................................................................................................................29200.05100000000000010000
....................TCAGAAATAC---------------AATCTGCAG-----GGCC-ACT..........................................................................................................................................................................................................................................................................26200.05100010000000000000
.............................................................................................................................................................................................................................TAC---------GCTAGGGACATATCATCTT.................................................................................22200.05100000000000010000
.....................................................................................................................................................................CAAAAGCCGA------TAATATAAAAGTGGT.........................................................................................................................................25200.05100000000000001000
...................................................................................................................................................................................................................TAACTTCTCTTAC---------GCTAGG..............................................................................................19200.05100000000100000000
.....................................................................................................................................................TATATACAAGACAAAACAAA....................................................................................................................................................................20200.05100000000001000000
droSec2
TACCGGCACAAGTTGGCGCTTCAGAAATAC---------------AATCTGCAG-----CACC-AAAACCCCTCGCGGTGGTTCCACTAAAGAAACAAATTTTCGTTTCTCGGCTTTCCCCTGATCAAACATTGTCGGATGTATTGTCTTATATACAAAACAAAACAAAAGCCGA------TAATATAAAAGTGGAAA---------AATTTAACTTCTCTTAC---------GCTAGGGACATATCATCTTTCCCA--AA-----------------CGAGCTCTTCTGGACCATATGTTCGGGTGATTTTTGGCGTG------ATAG---TSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................................................................................................................................................................................................................................................TCTTTCCCA--AA-----------------CGAGCTCTTC.............................................2111.0010001
.....................................................................................................................................................................................................................................................TCATCTTTCCCA--AA-----------------CGAGCTCTTC.............................................2411.0011000
................................................................................................................................................................................................................................................................................................TGGACCATATGTTCGGGTGATTTTT....................2511.0011000
......................................................................................................................CCCTGATCAAACATTGTCGGATGT...............................................................................................................................................................................................2440.7533000
...................TTCAGAAATAC---------------AATCTGCAG-----CACC-.............................................................................................................................................................................................................................................................................24200.4088000
...................TTCAGAAATAC---------------AATCTGCAG-----CACC-A............................................................................................................................................................................................................................................................................25200.2044000
..........................................................................................................................................................................GCCGA------TAATATAAAAGTGGAAA---------AAT...........................................................................................................................25200.2044000
TACCGGCACAAGTTGGCGCTT........................................................................................................................................................................................................................................................................................................................21200.0511000
.................................................................................................AATTTTCGTTTCTCGGCT..........................................................................................................................................................................................................................18200.0510010
............................AC---------------AATCTGCAG-----CACC-AAAACCCCTC...................................................................................................................................................................................................................................................................25200.0511000
.........................................................................CGCGGTGGTTCCACTAAAGAAACAAA..........................................................................................................................................................................................................................................26200.0511000
droYak3
CACCGGCACAATTTGGCTCTACAAATACAC---------------AATCTGCAG-----TGCA-AAAACCCCTCACGGTGGTTCCACTAAATAAACAAATTTTCGTTTCTCGGCTTTCCCATGATCAAACATCATCTGATGT---GCCTTATATATAAGACAAAACAAAAGCCGA------TATCATAAAAGTGGAAA----------ATGTAACTTTTCTTAC---------GCTAGGTACATTTCATCTTTCAAG-TAACTG-------TCCCTATTGAACT------------ATGTTCTTGTGGTA----------------------TSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................AAACAAATTTTCGTTTCTCGGCTTTC.......................................................................................................................................................................................................................26200.05100100000000

Generated: 06/08/2015 at 04:45 PM