ID:

dpe_1821

 Coordinate:

scaffold_52:456558-456708 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-9.3 -9.2 -9.1

Flybase annnotation

exon [dper_GLEANR_5331:3]; CDS [Dper\GL22983-cds]; intron [Dper\GL22983-in]

Repeatable elements

NameClassFamilyStrand
(TTTA)nSimple_repeatSimple_repeat+
mature
star
  1. scaffold_198:17376-17394 +
  2. scaffold_75:231406-231424 +
  3. dpe_1821  scaffold_52:456617-456635 +
  4. scaffold_50:217933-217951 +
  5. scaffold_724:5302-5320 -
  6. scaffold_197:7244-7262 -
  7. scaffold_2980:2565-2583 +
  8. scaffold_224:24862-24880 +
  9. scaffold_274:22811-22829 +
  10. scaffold_377:10527-10545 +
  11. scaffold_670:6914-6932 -
  12. scaffold_745:6986-7004 +
  13. scaffold_3549:211-229 +
  14. scaffold_1767:1359-1377 -
  15. scaffold_4346:647-665 -
  16. scaffold_1805:3889-3907 +
  17. scaffold_2184:2549-2567 -
  18. scaffold_2290:2087-2105 -
  19. scaffold_2481:2137-2155 +
  20. scaffold_10328:1012-1030 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ATACGAGTATCTGCGCAAGGGAATGGCCGCCCGACCCGAACACTGGTGGAGTTTATTGATCTGACGATTTGCAAGGATACGGCCCCACGTTTGGCCAAGTAATCAATATCTAACGGGAATCCAATGTTATATATATTTTTTACTGTGTTTTTTGACGATGCCACACACGAACACAAAATTATACTTGAGCTATTTATTTATTTATTTATTAAATTAACAATTATCTGTTAATAATGGTACTTAGTTACTAA
****************************************************.(((((......((.........(((((((((........))))..))).)).........))......)))))..*************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V111
male body		 M042
female body
 M021
embryo
...............................................GGAGTTTATTGATCTGACGAT....................................................................................................................................................................................... 21 0 1 5.00 5 5 0 0
...............................................GGAGTTTATTGATCTGACGA........................................................................................................................................................................................ 20 0 1 1.00 1 1 0 0
......................................AACACTGGTGGAGTTTATTGA................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0
...............................................GGAGTTTATTGATCTAACG......................................................................................................................................................................................... 19 1 1 1.00 1 1 0 0
....................................................TTATTGATCTGACGATTTGC................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0
............................................................CTGACGATTTGCAAGGATACG.......................................................................................................................................................................... 21 0 4 0.25 1 1 0 0
.............................................................TGACGATTTGCAAGGATAC........................................................................................................................................................................... 19 0 4 0.25 1 1 0 0
..........................................................................................................................................................................................................................AATTATCTGTTAATAATGGTACTTAGA...... 27 1 20 0.25 5 0 5 0
...............................................................ACGATTTGCAAGGATACGGCC....................................................................................................................................................................... 21 0 20 0.20 4 4 0 0
................................................................................................................................................................CCAGACACGTACACAAAATTGT..................................................................... 22 3 6 0.17 1 0 0 1
......GTATCTGCGCAAGGGAATGGC................................................................................................................................................................................................................................ 21 0 20 0.15 3 3 0 0
..............................................................GACGATTTGCAAGGATACG.......................................................................................................................................................................... 19 0 20 0.10 2 2 0 0
...............................................................ACGATTTGCAAGGATACGGC........................................................................................................................................................................ 20 0 20 0.10 2 2 0 0
......GTATCTGCGCAAGGGAATGG................................................................................................................................................................................................................................. 20 0 20 0.10 2 2 0 0
.............................................................................................................CTAACGGGAATCCAATGTT........................................................................................................................... 19 0 20 0.10 2 2 0 0
...............................................................ACGATTTGCAAGGATACGG......................................................................................................................................................................... 19 0 20 0.10 2 2 0 0
.....................................GAACACTGGTGGAGTTTATTG................................................................................................................................................................................................. 21 0 20 0.10 2 2 0 0
..............................................................GACGATTTGCAAGGATACGGCC....................................................................................................................................................................... 22 0 20 0.10 2 2 0 0
..............................................................GACGATTTGCAAGGATACGG......................................................................................................................................................................... 20 0 20 0.10 2 2 0 0
....................................................................TTGCAAGGATACGGCCCCAC................................................................................................................................................................... 20 0 20 0.10 2 2 0 0
.....AGTATCTGCGCAAGGGAATGG................................................................................................................................................................................................................................. 21 0 20 0.10 2 2 0 0
.............................................ATGGAATTTTTTGATCTGAC.......................................................................................................................................................................................... 20 3 18 0.06 1 0 1 0
..............................CCGACCCGAACACTGGTGG.......................................................................................................................................................................................................... 19 0 20 0.05 1 1 0 0
.......................................ACACTGGTGGAGTTTATTG................................................................................................................................................................................................. 19 0 20 0.05 1 1 0 0
..........................................................................................................................................................................................................................AATTATCTGTTAATAATGG.............. 19 0 20 0.05 1 0 1 0
...................................CCGAACACTGGTGGAGTTTA.................................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0
...................................................................TTTGCAAGGATACGGCCCCA.................................................................................................................................................................... 20 0 20 0.05 1 1 0 0
............................................................................................................................................................................................................................TTATCTGTTAATAATGGTACTTAGTTA.... 27 0 20 0.05 1 0 1 0
.......................................................................CAAGGATACGGCCCCACGTTTT.............................................................................................................................................................. 22 1 20 0.05 1 1 0 0
.....................................................................................................................................................................................................................TTAACAATTATCTGTTAATAATGGTAC........... 27 0 20 0.05 1 0 1 0
..............................................................GACGATTTGCAAGGATACGGC........................................................................................................................................................................ 21 0 20 0.05 1 1 0 0
.................................................................................................................................................................................................................................TGTTAATAATGGTACTTAGT...... 20 0 20 0.05 1 0 1 0
..........................................................................................................................................TTTACTGTGTTTTTTGACG.............................................................................................. 19 0 20 0.05 1 1 0 0
..............................CCGACCCGAACACTGGTGGAG........................................................................................................................................................................................................ 21 0 20 0.05 1 0 1 0
.........................................................................................................................................................................................................................CAATTATCTGTTAATAATGGTACT.......... 24 0 20 0.05 1 0 1 0
................................................................CGATTTGCAAGGATACGGCC....................................................................................................................................................................... 20 0 20 0.05 1 1 0 0
....GAGTATCTGCGCAAGGGAATG.................................................................................................................................................................................................................................. 21 0 20 0.05 1 1 0 0
...............................CGACCCGAACACTGGTGGAGT....................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0
.................................ACCCGAACACTGGTGGAGTT...................................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0

Anti-sense strand reads

TATGCTCATAGACGCGTTCCCTTACCGGCGGGCTGGGCTTGTGACCACCTCAAATAACTAGACTGCTAAACGTTCCTATGCCGGGGTGCAAACCGGTTCATTAGTTATAGATTGCCCTTAGGTTACAATATATATAAAAAATGACACAAAAAACTGCTACGGTGTGTGCTTGTGTTTTAATATGAACTCGATAAATAAATAAATAAATAATTTAATTGTTAATAGACAATTATTACCATGAATCAATGATT
***************************************************************************************************************************.(((((......((.........(((((((((........))))..))).)).........))......)))))..**************************************************** 		Read size # Mismatch Hit Count Total Norm Total V111
male body		 V057
head
 V050
head
................TTCCGTTACTGGAGGGCTGGGCT.................................................................................................................................................................................................................... 23 3 1 1.00 1 0 1 0
..............................................................CTGCTAAACGTTCCTATGCCG........................................................................................................................................................................ 21 0 20 0.20 4 3 0 1
.............................GGGCTGGGCTTGTGACCACC.......................................................................................................................................................................................................... 20 0 20 0.15 3 3 0 0
...................................GGCTTGTGACCACCTCAAATA................................................................................................................................................................................................... 21 0 20 0.15 3 3 0 0
.............................GGGCTGGGCTTGTGACCACCT......................................................................................................................................................................................................... 21 0 20 0.15 3 3 0 0
......................................................................................................................................................AAACTGCTACGGTGTGTGCTT................................................................................ 21 0 19 0.11 2 2 0 0
............................................................................................................AGATTGCCCTTAGGTTACAAT.......................................................................................................................... 21 0 20 0.10 2 2 0 0
..................................................................................GGGGTGCAAACCGGTTCATTA.................................................................................................................................................... 21 0 20 0.10 2 2 0 0
............................CGGGCTGGGCTTGTGACCACC.......................................................................................................................................................................................................... 21 0 20 0.10 2 2 0 0
..................................................................................GGGGTGCAAACCGGTTCATT..................................................................................................................................................... 20 0 20 0.10 2 2 0 0
...................................GGCTTGTGACCACCTCAAA..................................................................................................................................................................................................... 19 0 20 0.10 2 2 0 0
..............................GGCTGGGCTTGTGACCACC.......................................................................................................................................................................................................... 19 0 20 0.10 2 2 0 0
..............................................................................................................................................................ACGGTGTGTGCTTGTGTTTT......................................................................... 20 0 18 0.06 1 1 0 0
.........................................................................................................................................................CTGCTACGGTGTGTGCTTGTG............................................................................. 21 0 18 0.06 1 1 0 0
...............................................................................................................................................................CGGTGTGTGCTTGTGTTTT......................................................................... 19 0 18 0.06 1 1 0 0
............................................................................................................................................................CTACGGTGTGTGCTTGTGTTT.......................................................................... 21 0 18 0.06 1 1 0 0
.........................................................................................................................................................CTGCTACGGTGTGTGCTTGT.............................................................................. 20 0 19 0.05 1 1 0 0
........................................................................TTCCTATGCCGGGGTGCAAAC.............................................................................................................................................................. 21 0 20 0.05 1 1 0 0
.....................................CTTGTGACCACCTCAAATAAC................................................................................................................................................................................................. 21 0 20 0.05 1 1 0 0
..................................................................................GGGGTGCAAACCGGTTCAT...................................................................................................................................................... 19 0 20 0.05 1 1 0 0
............................CGGGCTGGGCTTGTGACCAC........................................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0
................................CTGGGCTTGTGACCACCTCAA...................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0
............................................................................................................AGATTGCCCTTAGGTTACAATA......................................................................................................................... 22 0 20 0.05 1 1 0 0
..................................................................................GGGGTGCAAACCGCTTCATTA.................................................................................................................................................... 21 1 20 0.05 1 1 0 0
.........................CGGCGGGCTGGGCTTGTG................................................................................................................................................................................................................ 18 0 20 0.05 1 1 0 0
......................TGCCGGCGGTCTGGGCTT................................................................................................................................................................................................................... 18 2 20 0.05 1 0 1 0
....................................................................................TGTGCAAACCGGTTCATTAGTT................................................................................................................................................. 22 1 20 0.05 1 1 0 0
..................................GGGCTTGTGACCACCTCAAAT.................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0
............................................................................................................AGATTGCCCTTAGGTTACAA........................................................................................................................... 20 0 20 0.05 1 1 0 0
.................................................................................................................TCCCTTAGGTTACAATATATAT.................................................................................................................... 22 1 20 0.05 1 1 0 0
...................................................................................................................................................AAAAAACTGCTACGGTGTG..................................................................................... 19 0 20 0.05 1 1 0 0
.............................................................................................................GATTGCCCTTAGGTTACAAT.......................................................................................................................... 20 0 20 0.05 1 1 0 0
....................................................................................GGTGCAAACCGGTTCATTA.................................................................................................................................................... 19 0 20 0.05 1 1 0 0
.......................................................................................GCAAACCGGTTCATTAGTTA................................................................................................................................................ 20 0 20 0.05 1 1 0 0
.......................................................................GTTACTAGGCAGGGGTGCA................................................................................................................................................................. 19 3 20 0.05 1 0 0 1
.................................................................................................................GCCCTTAGGTTACAATATAT...................................................................................................................... 20 0 20 0.05 1 1 0 0
................................................................GCTAAACGTTCCTATGCCG........................................................................................................................................................................ 19 0 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_52:456508-456758 + dpe_1821 ATACGAGTATCTGCGCAAGGGAATGGCCG----CCCGACCCGAACACTGGTGGAGTTTATTGATCTGACGATTTGCAAGGATACGGCCCCACGTTTGGCCAAGTAATCAATATCTAACGGGAATCCAATGTTATATATA---------------------------------------------------------------TTTTTTACT-GTGTTT-TTTGACGATGCCACACACGAACACAAAATTATACTTGAGCTATTTATTTATTTATTTATTAA-ATTAACAATTATCTGTTAA--TAATGGTACTTAGTTACTAA
dp5 Unknown_group_764:28598-28794 + ATACGAGTATCTGCGCAAGGGAATGGCCGGCCGCCCGACCCGAACACTGGTGGAGTTTATTGCTCAGACGATTTGCAAGGATACGGCCCCACGTTTGGCCAAGTAATCAATCTCTAACGGGAATCCAATGTTAAATATA---------------------------------------------------------------TTTTTTACT-GTGTTT-TTTGACGATGCCACACACGAACACAAAATTACACTTGAGCT-------------------------------------------------------------AT
droWil2 scf2_1100000004762:5017642-5017746 + CTTTGAATATTTGCGCCGTGGCATGGCCGGACGCCCAACTCGTACTCTAATTGAGTTTATTGCTCAAACCATTTGTAAGGACACAGCCCCAAAAATGGGCCAATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13049:6264275-6264380 + CTTCGAATACTTGCGACGTGGCATGGCCGGTCGTCCTACCAGAACCCTGATTGAGTTCATCGCTCAAACCATTTGCAAGGATACTGCACCAAAGATGGGAAAATAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6540:5534067-5534216 - GCATC---ATGTTTG-----ACATGTCCTAACGATCACTTTCCAATCGCATTCAATT------------------------------------------------------------------------TTCATTTACTTATTTTATCTGTAACTTTATTTATATAATGAAGTGTATGTACATACGTGATTATTT-ATTTATTTATTTAT---TT-------------------------------------------------------------ATTTA-TTTATTTATTTT---------------------------CT
droGri2 scaffold_15072:75959-76082 + CTTCGAATATCTCAGGCGTGGAATGGCTGGACGTCCTACCAGAACCCTCATTGAATTCATTGCGCAGACCATTTGCAAGGACACTGCGCCAAAAATGGGAAAATAAA---------ATTTGTAT--------------------------------------------------------------------------GCAATGTTA--------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13337:8020745-8020898 - GTTTGAATATCTGCGACAGGGAATGGCTGGCCGCCCCACGCGAACCCTCATCGAGTTTATTGCGCAGACCATTTGCAAGGATACGGCACCCAAGCTTAACAAGTGATGATTAT-----------------------------------------------------------------------------CCTTGAAAATGGTGTTTTAC--GTTATATTGAGACGATGCCAC------------------------------------------------------------------------------------------
droBip1 scf7180000396541:181454-181607 - ATTTGAATATCTGCGACAGGGTATGGCTGGCCGCCCCACGCGAACCCTCATCGAGTTTATTGCGCAGACCATTTGCAAGGATACGGCACCCAAGCTTAACAAGTGATGACTAT-----------------------------------------------------------------------------CCTTGAAAATGGTGTTTTAC--GTTATATTGAGACGATGCCAC------------------------------------------------------------------------------------------
droKik1 scf7180000301550:1079-1213 - AA-----TACCTAAAGAAAAACCAAATCGAA-----------------------ATCCATTTTACCA-CTTCATACAAAAAAACCG---------------------------------GGAATTCAGATTTT------------------------------------------------------------------------------------------------------------------------------TATTTATTTATTTATTTATTAAGAATAGAAAATATCTGCCATTTTAAATCCATATCCTTACCTC
droFic1 scf7180000453833:796437-796584 + GTTCGAGTATCTGCGACAGGGCATGGCAGGTCGGCCAACGAGGACACTCATCGAATTCATAGCGCAATCGATTTGCAAGGATACGGCTCCCAAGATCAACAAGTGAT-----------------------------------------------------------------------------------CGTTC-CAACGGTGTTTTAC--AGTTTA-TCAGACGATGCCACAC----------------------------------------------------------------------------------------
droEle1 scf7180000491268:68057-68205 - GTTCGAGTATCTACGACAGGGCATGGCTGGACGGCCAACGAGGACACTCATCGAGTTTATTGCGCAGTCCATATGCAAGGATACGGCTCCCAAGCTCAACAAATGAT-----------------------------------------------------------------------------------CCTTC-GAACGGTGTTTA-CTTGTTTTT-TCAGACGATGCCACAC----------------------------------------------------------------------------------------
droRho1 scf7180000779204:260553-260700 + GTTCGAGTATCTGCGACAGGGCATGGCCGGACGGCCCACAAGGACACTCATCGAGTTTATTGCGCAGTCTATATGCAAGGATACGGCTCCCAAGCTAAACAAGTGAT-----------------------------------------------------------------------------------CCTTC-GAACGGTGTTTA-CTAGTTTTA-TCTGACGATGCCACA-----------------------------------------------------------------------------------------
droBia1 scf7180000302428:10551887-10551993 + GTTCGAGTATCTGCGACAGGGCATGGCCGGACGGCCCACAAGGACACTCATCGAGTTTATTGCGCAGTCCATATGCAAGGACACGGCTCCCAAGCTAAACAAGTGAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000414445:92821-92969 - GTTCGAGTATCTGCGACAGGGGATGGCCGGGCGGCCAACGAGGACACTCATCGAGTTTATTGCGCAGTCCATATGCAAGGATACGGCGCCCAAGCTAAACAAGTGAT-----------------------------------------------------------------------------------ACGTG-GAACGGTGTTTTTG-TGTTTTA-TCAGACGATGCCACAC----------------------------------------------------------------------------------------
droEug1 scf7180000409524:46633-46779 - GTTTGAATATCTGCGAGAGGGCATGGCCGGACGGCCAACTAGGACACTCATAGAGTTTATTGCACAGTCCATATGCAAAGATACTGCCCCTAAGCTAAACAAGTGAG-----------------------------------------------------------------------------------GACTT-CAACGGTGTTTTA---ATTTTA-TCAGACGATGCCACAC----------------------------------------------------------------------------------------
dm3 chr3L:8614908-8615013 + GTTCGAGTATCTGCGAGAGGGCATGGCCGGACGTCCAACAAGGACACTCATCGAGTTTATTGCACAGTCCATATGCAAGGACACAGCTCCAAAGCTTAACAAGTGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 3l:8404338-8404484 + GTTCGAGTATCTGCGAGAGGGCATGGCTGGACGTCCGACAAGGACACTCATCGAGTTCATTGCACAGTCCATATGCAAGGACACAGCTCCAAAGCTTAACAAGTGAT-----------------------------------------------------------------------------------CCTTC-GAACGGTGTTTTA---GTTTTA-TCAGACGATGCCACAC----------------------------------------------------------------------------------------
droSec2 scaffold_0:893633-893779 + GTTCGAGTATCTGCGAGAGGGCATGGCAGGACGTCCGACAAGGACACTCATCGAGTTTATTGCACAGTCCATATGCAAGGACACAGCTCCAAAGCTTAACAAGTGAT-----------------------------------------------------------------------------------CCTTC-GAACGGTGTTTTA---GTTTTA-TCAGACGATGCCACAC----------------------------------------------------------------------------------------
droYak3 3L:3297564-3297710 - GTTCGAGTATCTGCGTCAGGGCATGGCCGGACGACCTACAAGGACACTCATCGAGTTTATTGCACAGTCCATTTGCAAGGACACAGCTCCAAAACTTAACAAGTGAT-----------------------------------------------------------------------------------CCTGC-GAACGGTGTTTTA---GTTTTA-TCAGACGATGCCACAC----------------------------------------------------------------------------------------
droEre2 scaffold_4784:5431367-5431513 - GTTCGAGTATCTGCGCCAGGGCATGGCCGGACGACCTACAAGGACACTCATCGAGTTTATTGCACAGTCCATATGCAAGGACACAGCTCCAAAACTTAACAAGTGAT-----------------------------------------------------------------------------------CCTTC-GAACAGTGTTTTA---GGTTTA-TTAGACGATGCCACAC----------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
ATACGAGTATCTGCGCAAGGGAATGGCCG----CCCGACCCGAACACTGGTGGAGTTTATTGATCTGACGATTTGCAAGGATACGGCCCCACGTTTGGCCAAGTAATCAATATCTAACGGGAATCCAATGTTATATATA---------------------------------------------------------------TTTTTTACT-GTGTTT-TTTGACGATGCCACACACGAACACAAAATTATACTTGAGCTATTTATTTATTTATTTATTAA-ATTAACAATTATCTGTTAA--TAATGGTACTTAGTTACTAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................................GGAGTTTATTGATCTGACGAT...........................................................................................................................................................................................................................................................2115.005000005
...................................................GGAGTTTATTGATCTGACGA............................................................................................................................................................................................................................................................2011.001000001
..........................................AACACTGGTGGAGTTTATTGA....................................................................................................................................................................................................................................................................2111.001000001
........................................................TTATTGATCTGACGATTTGC.......................................................................................................................................................................................................................................................2011.001000001
................................................................CTGACGATTTGCAAGGATACG..............................................................................................................................................................................................................................................2140.251000001
.................................................................TGACGATTTGCAAGGATAC...............................................................................................................................................................................................................................................1940.251000001
................................................................................................................................................................................................................................................................................................AATTATCTGTTAA--TAATGGTACTTAGA......27200.255050000
...................................................................ACGATTTGCAAGGATACGGCC...........................................................................................................................................................................................................................................21200.204000004
......GTATCTGCGCAAGGGAATGGC........................................................................................................................................................................................................................................................................................................21200.153000003
..................................................................GACGATTTGCAAGGATACG..............................................................................................................................................................................................................................................19200.102000002
...................................................................ACGATTTGCAAGGATACGGC............................................................................................................................................................................................................................................20200.102000002
......GTATCTGCGCAAGGGAATGG.........................................................................................................................................................................................................................................................................................................20200.102000002
.................................................................................................................CTAACGGGAATCCAATGTT...............................................................................................................................................................................................19200.102000002
...................................................................ACGATTTGCAAGGATACGG.............................................................................................................................................................................................................................................19200.102000002
.........................................GAACACTGGTGGAGTTTATTG.....................................................................................................................................................................................................................................................................21200.102000002
..................................................................GACGATTTGCAAGGATACGGCC...........................................................................................................................................................................................................................................22200.102000002
..................................................................GACGATTTGCAAGGATACGG.............................................................................................................................................................................................................................................20200.102000002
........................................................................TTGCAAGGATACGGCCCCAC.......................................................................................................................................................................................................................................20200.102000002
.....AGTATCTGCGCAAGGGAATGG.........................................................................................................................................................................................................................................................................................................21200.102000002
..................................CCGACCCGAACACTGGTGG..............................................................................................................................................................................................................................................................................19200.051000001
...........................................ACACTGGTGGAGTTTATTG.....................................................................................................................................................................................................................................................................19200.051000001
................................................................................................................................................................................................................................................................................................AATTATCTGTTAA--TAATGG..............19200.051010000
.......................................CCGAACACTGGTGGAGTTTA........................................................................................................................................................................................................................................................................20200.051000001
.......................................................................TTTGCAAGGATACGGCCCCA........................................................................................................................................................................................................................................20200.051000001
..................................................................................................................................................................................................................................................................................................TTATCTGTTAA--TAATGGTACTTAGTTA....27200.051010000
...........................................................................CAAGGATACGGCCCCACGTTTT..................................................................................................................................................................................................................................22200.051000001
...........................................................................................................................................................................................................................................................................................TTAACAATTATCTGTTAA--TAATGGTAC...........27200.051010000
..................................................................GACGATTTGCAAGGATACGGC............................................................................................................................................................................................................................................21200.051000001
.......................................................................................................................................................................................................................................................................................................TGTTAA--TAATGGTACTTAGT......20200.051010000
.............................................................................................................................................................................................................TTTACT-GTGTTT-TTTGACG.................................................................................................19200.051000001
..................................CCGACCCGAACACTGGTGGAG............................................................................................................................................................................................................................................................................21200.051010000
...............................................................................................................................................................................................................................................................................................CAATTATCTGTTAA--TAATGGTACT..........24200.051010000
....................................................................CGATTTGCAAGGATACGGCC...........................................................................................................................................................................................................................................20200.051000001
....GAGTATCTGCGCAAGGGAATG..........................................................................................................................................................................................................................................................................................................21200.051000001
...................................CGACCCGAACACTGGTGGAGT...........................................................................................................................................................................................................................................................................21200.051000001
.....................................ACCCGAACACTGGTGGAGTT..........................................................................................................................................................................................................................................................................20200.051000001
dp5
ATACGAGTATCTGCGCAAGGGAATGGCCGGCCGCCCGACCCGAACACTGGTGGAGTTTATTGCTCAGACGATTTGCAAGGATACGGCCCCACGTTTGGCCAAGTAATCAATCTCTAACGGGAATCCAATGTTAAATATA---------------------------------------------------------------TTTTTTACT-GTGTTT-TTTGACGATGCCACACACGAACACAAAATTACACTTGAGCT-------------------------------------------------------------ATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.TACGAGTATCTGCGCAAGGGAATGGC........................................................................................................................................................................................................................................................................................................2673.862700000000270
.TACGAGTATCTGCGCAAGGGAATGG.........................................................................................................................................................................................................................................................................................................2571.0070000000070
..............................................................................................................................................................................................................TTACT-GTGTTT-TTTGACGATG..............................................................................................21130.6990000000090
.............................................................................................................................................................................................................TTTACT-GTGTTT-TTTGACGAT...............................................................................................21130.6280000000080
..........................................................................................................................................................................................................TTTTTTACT-GTGTTT-TTTGAC..................................................................................................21130.6280000000080
.......TATCTGCGCAAGGGAATGGC........................................................................................................................................................................................................................................................................................................2070.5740000000040
.TACGAGTATCTGCGCAAGGGAATGGCC.......................................................................................................................................................................................................................................................................................................2770.4330000000030
............................................................................................................................................................................................................TTTTACT-GTGTTT-TTTGACG.................................................................................................20130.3140000000040
...........................................................................................................................................................................................................TTTTTACT-GTGTTT-TTTGAC..................................................................................................20130.3140000000040
........ATCTGCGCAAGGGAATGGC........................................................................................................................................................................................................................................................................................................1970.2920000000020
.......TATCTGCGCAAGGGAATGGCCGGC....................................................................................................................................................................................................................................................................................................2470.2920000000020
..............................................................CTCAGACGATTTGCAAGGATACGGCC...........................................................................................................................................................................................................................................26110.2730000000030
..................................................................GACGATTTGCAAGGATACGGC............................................................................................................................................................................................................................................21120.2530000000030
...................................................................................................................................TAAATATA---------------------------------------------------------------TTTTTTACT-GTG............................................................................................................2080.2520000000020
................................................................CAGACGATTTGCAAGGATACGG.............................................................................................................................................................................................................................................22120.2530000001020
...................................................................ACGATTTGCAAGGATACGGC............................................................................................................................................................................................................................................20120.2530000000030
...............................................................................................................................................................................................................TACT-GTGTTT-TTTGACGATG..............................................................................................20130.2330000000030
...............................................................................................................................................................................................................TACT-GTGTTT-TTTGACGATGC.............................................................................................21130.2330000000030
.........................................................................................CACGTTTGGCCAAGTAATCAA.....................................................................................................................................................................................................................21130.2330000000030
..........................................................................................................................................A---------------------------------------------------------------TTTTTTACT-GTGTTT-TTTGA...................................................................................................21130.2330000000030
....................................................................CGATTTGCAAGGATACGGC............................................................................................................................................................................................................................................19120.1720000000020
.........................................................................................CACGTTTGGCCAAGTAATCAAT....................................................................................................................................................................................................................22130.1520000000020
..........................................................................................................................................................................................................TTTTTTACT-GTGTTT-TTTGA...................................................................................................20130.1520000000020
................................................................................................................................................................................................................ACT-GTGTTT-TTTGACGATGCC............................................................................................21130.1520000000020
..................................CCGACCCGAACACTGGTGGA.............................................................................................................................................................................................................................................................................20130.1520000000020
.....................................................AGTTTATTGCTCAGACGATTT.........................................................................................................................................................................................................................................................21130.1520000000020
..........................................................................................................................................A---------------------------------------------------------------TTTTTTACT-GTGTTT-TTTG....................................................................................................20130.1520000000020
..............................................................CTCAGACGATTTGCAAGGAT.................................................................................................................................................................................................................................................20130.1520000002000
...CGAGTATCTGCGCAAGGGAATGGC........................................................................................................................................................................................................................................................................................................2470.1410000000010
.......TATCTGCGCAAGGGAATGG.........................................................................................................................................................................................................................................................................................................1970.1410000001000
.......TATCTGCGCAAGGGAATGGCC.......................................................................................................................................................................................................................................................................................................2170.1410000000010
.........TCTGCGCAAGGGAATGGCCGT.....................................................................................................................................................................................................................................................................................................2170.1410000000010
........ATCTGCGCAAGGGAATGGCC.......................................................................................................................................................................................................................................................................................................2070.1410000001000
.TACGAGTATCTGCGCAAGGGAATGGCCG......................................................................................................................................................................................................................................................................................................2870.1410000000010
.TACGAGTATCTGCGCAAGGGAATG..........................................................................................................................................................................................................................................................................................................2480.1310000000010
................................................................................................................................................................................................................................................CACAAAATTACACTTGAGCT-------------------------------------------------------------A.2180.1310000001000
..................................................................................................................................TTAAATATA---------------------------------------------------------------TTTTTTACT-GTG............................................................................................................2180.1310000000010
...............................................................................GATACGGCCCCACGTTTGGC................................................................................................................................................................................................................................20110.0910001000000
............................................................TGCTCAGACGATTTGCAAGGATACGGC............................................................................................................................................................................................................................................27110.0910000000010
............................................................TGCTCAGACGATTTGCAAGGATACGG.............................................................................................................................................................................................................................................26110.0910000000010
......................................................................ATTTGCAAGGATACGGCCCC.........................................................................................................................................................................................................................................20120.0810000001000
.................................CCCGACCCGAACACTGGTGGA.............................................................................................................................................................................................................................................................................21120.0810000000010
....................................................................CGATTTGCAAGGATACGGCC...........................................................................................................................................................................................................................................20120.0810000000010
........................................................................TTGCAAGGATACGGCCCCACG......................................................................................................................................................................................................................................21120.0810000000010
........................................................................TTGCAAGGATACGGCCCCAC.......................................................................................................................................................................................................................................20120.0810000001000
................................................................CAGACGATTTGCAAGGATACG..............................................................................................................................................................................................................................................21120.0810000000010
..............................................................CTCAGACGATTTGCAAGGATAA...............................................................................................................................................................................................................................................22130.0810000000010
.........................................................................................................................................TA---------------------------------------------------------------TTTTTTACT-GTGTTT-TTTG....................................................................................................21130.0810000000010
...........................................................TTGCTCAGACGATTTGCAAGG...................................................................................................................................................................................................................................................21130.0810000001000
..................................CCGACCCGAACACTGGTGGAG............................................................................................................................................................................................................................................................................21130.0810000000010
.......................................................TTTATTGCTCAGACGATTTG........................................................................................................................................................................................................................................................20130.0810000000010
............................................................................................................................................................................................................TTTTACT-GTGTTT-TTTGACGA................................................................................................21130.0810000000010
.........................................................................................................................................TA---------------------------------------------------------------TTTTTTACT-GTGTTT-TTTGACGA................................................................................................25130.0810000000010
.............................................................................................................................................................................................................TTTACT-GTGTTT-TTTGACG.................................................................................................19130.0810000000010
..............................................................................................................................................................................................................TTACT-GTGTTT-TTTGACGATGCCA...........................................................................................24130.0810000000010
...................................CGACCCGAACACTGGTGGAG............................................................................................................................................................................................................................................................................20130.0810000000010
.............................................................................................................................................................................................................TTTACT-GTGTTT-TTTGACGAA...............................................................................................21130.0810000000010
..............................................................................................................................................................................................................TTACT-GTGTTT-TTTGACGAT...............................................................................................20130.0810000000010
.................................................................................................................................................................................................................CT-GTGTTT-TTTGACGATGCC............................................................................................20140.0711000000000
.................................................................AGACGATTTGCAAGGA..................................................................................................................................................................................................................................................16140.0710000000010
..............................................CTGGTGGAGTTTATTGCTCA.................................................................................................................................................................................................................................................................20140.0710000001000
.......................................................................................................................................................................................................................TTT-TTTGACGATGCCACACACTTC...................................................................................24150.0710000000010
...............................................................................................TGGCCAAGTAATCAATCTC.................................................................................................................................................................................................................19150.0710001000000
droWil2
CTTTGAATATTTGCGCCGTGGCATGGCCGGACGCCCAACTCGTACTCTAATTGAGTTTATTGCTCAAACCATTTGTAAGGACACAGCCCCAAAAATGGGCCAATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
CTTCGAATACTTGCGACGTGGCATGGCCGGTCGTCCTACCAGAACCCTGATTGAGTTCATCGCTCAAACCATTTGCAAGGATACTGCACCAAAGATGGGAAAATAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............ACGTGGCATGGCCGGTCGTC................................................................................................................................................................................................................................................................................................2013.003000000000000000000003000000000000000000000000000000000000000000
..........TTGCGACGTGGCATGGCC.......................................................................................................................................................................................................................................................................................................1813.003002000000100000000000000000000000000000000000000000000000000000
...........TGCGACGTGGCATGGCCGT.....................................................................................................................................................................................................................................................................................................1913.003000000000200000000001000000000000000000000000000000000000000000
.......TACTTGCGACGTGGCATGGCCGGTCGT.................................................................................................................................................................................................................................................................................................2712.002000000000100000000000000000001000000000000000000000000000000000
...CGAATACTTGCGACGTGGC.............................................................................................................................................................................................................................................................................................................1912.002000000000100000000000000000001000000000000000000000000000000000
..........TTGCGACGTGGCATGGCCG......................................................................................................................................................................................................................................................................................................1912.002000000020000000000000000000000000000000000000000000000000000000
.....AATACTTGCGACGTGGCAT...........................................................................................................................................................................................................................................................................................................1912.002000000000000000000000000000002000000000000000000000000000000000
........ACTTGCGACGTGGCATGGCCGGT....................................................................................................................................................................................................................................................................................................2312.002000000000200000000000000000000000000000000000000000000000000000
......ATACTTGCGACGTGGCATGGCCGGTCGT.................................................................................................................................................................................................................................................................................................2812.002000000000200000000000000000000000000000000000000000000000000000
.......TACTTGCGACGTGGCATGGCCG......................................................................................................................................................................................................................................................................................................2212.002000000000200000000000000000000000000000000000000000000000000000
.................GTGGCATGGCCGGTCGTCCTACC...........................................................................................................................................................................................................................................................................................2311.001000000000100000000000000000000000000000000000000000000000000000
.........CTTGCGACGTGGCATGGCCGGT....................................................................................................................................................................................................................................................................................................2211.001000000010000000000000000000000000000000000000000000000000000000
.................................................................................TACTGCACCAAAGATGGGAAAA............................................................................................................................................................................................................................2211.001000000000000000000000000000010000000000000000000000000000000000
......................................................GTTCATCGCTCAAACCATTTGCAA.....................................................................................................................................................................................................................................................2411.001000000000000000000000000000001000000000000000000000000000000000
...........................................................................CAAGGATACTGCACCAAA......................................................................................................................................................................................................................................1811.001000000000000000000000000000001000000000000000000000000000000000
..........................................AACCCTGATTGAGTTCATCGCT...................................................................................................................................................................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
......................ATGGCCGGTCGTCCTACCAG.........................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
...........................................ACCCTGATTGAGTTCATCGCT...................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
...............ACGTGGCATGGCCGGTCGTCCTACCA..........................................................................................................................................................................................................................................................................................2611.001100000000000000000000000000000000000000000000000000000000000000
..........TTGCGACGTGGCATGGCCGGTCG..................................................................................................................................................................................................................................................................................................2311.001000000010000000000000000000000000000000000000000000000000000000
....................GCATGGCCGGTCGTCCTACCA..........................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
.................................................ATTGAGTTCATCGCTCAG................................................................................................................................................................................................................................................................1811.001000000000000000000000000000010000000000000000000000000000000000
...............................................................................GATACTGCACCAAAGATGGGAAAATA..........................................................................................................................................................................................................................2611.001000000000000000000000000000010000000000000000000000000000000000
..............................................................CTCAAACCATTTGCAAGGATAC...............................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
........ACTTGCGACGTGGCATGGCCGGTCGTC................................................................................................................................................................................................................................................................................................2711.001000000000100000000000000000000000000000000000000000000000000000
...........................CGGTCGTCCTACCAGAACC.....................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000001000000000000000000000000000000000
CTTCGAATACTTGCGACGTG...............................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
......ATACTTGCGACGTGGCATGG.........................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
......................ATGGCCGGTCGTCCTACCA..........................................................................................................................................................................................................................................................................................1911.001000000000100000000000000000000000000000000000000000000000000000
...CGAATACTTGCGACGTGGCATG..........................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
..................................................................AACCATTTGCAAGGATACTGCAC..........................................................................................................................................................................................................................................2311.001000000000000000000000000000010000000000000000000000000000000000
.........................................................................TGCAAGGATACTGCACCAAA......................................................................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
.........................................GAACCCTGATTGAGTTCATA......................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000100000000000000000000000000000000
........................................................................TTGCAAGGATACTGCACCA........................................................................................................................................................................................................................................1911.001000000000000000000000000000010000000000000000000000000000000000
..................................................................................ACTGCACCAAAGATGGGAAAATA..........................................................................................................................................................................................................................2311.001000000000000000000000000000000010000000000000000000000000000000
.........................................................................TGCAAGGATACTGCACCAAAG.....................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
............................................................................AAGGATACTGCACCAAAGATG..................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
...........TGCGACGTGGCATGGCCGGTCGTCC...............................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000010000000000000000000000000000000000
...............................................................................GATACTGCACCAAAGATGGGAAA.............................................................................................................................................................................................................................2311.001000000000000000000000000000000000100000000000000000000000000000
......ATACTTGCGACGTGGCATGGC........................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
......................................................................ATTTGCAAGGATACTGCACCAAA......................................................................................................................................................................................................................................2311.001000000000000000000000000000000010000000000000000000000000000000
.....................................ACCAGAACCCTGATTGAGT...........................................................................................................................................................................................................................................................................1911.001000000000000000000000000000001000000000000000000000000000000000
...............ACGTGGCATGGCCGGTCGTCCTAC............................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000010000000000000000000000000000000000
......ATACTTGCGACGTGGCATGGCC.......................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
.................GTGGCATGGCCGGTCGTCCTACCAGA........................................................................................................................................................................................................................................................................................2611.001000000000000000000001000000000000000000000000000000000000000000
...............................CGTCCTACCAGAACCCTGA.................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000001000000000000000000000000000000000
............................................CCCTGATTGAGTTCATCGCTC..................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
...........................CGGTCGTCCTACCAGAACCC....................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000010000000000000000000000000000000000
CTTCGAATACTTGCGACGTGGC.............................................................................................................................................................................................................................................................................................................2211.001000000000100000000000000000000000000000000000000000000000000000
......ATACTTGCGACGTGGCATGGCCGGTCGTC................................................................................................................................................................................................................................................................................................2911.001000000000100000000000000000000000000000000000000000000000000000
.TTCGAATACTTGCGACGTGGCAT...........................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000010000000000000000000000000000000
...CGAATACTTGCGACGTGGCATGGCCGGT....................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000001000000000000000000000000000000000
.................GTGGCATGGCCGGTCGTCCTAC............................................................................................................................................................................................................................................................................................2211.001000000000100000000000000000000000000000000000000000000000000000
..............GACGTGGCATGGCCGGTCGTCCTACC...........................................................................................................................................................................................................................................................................................2611.001100000000000000000000000000000000000000000000000000000000000000
.........................................GAACCCTGATTGAGTTCATCGCT...................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000100000000000000000000000000000000
.............................................................................AGGATACTGCACCAAAGATGGGAAAA............................................................................................................................................................................................................................2611.001000000000000000000000000000001000000000000000000000000000000000
............................................................................AAGGATACTGCACCAAAGAT...................................................................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
........................GGCCGGTCGTCCTACCAGAA.......................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000010000000000000000000000000000000
......................ATGGCCGGTCGTCCTACC...........................................................................................................................................................................................................................................................................................1811.001000000000100000000000000000000000000000000000000000000000000000
....GAATACTTGCGACGTGGCATGGCCGGT....................................................................................................................................................................................................................................................................................................2711.001000000000100000000000000000000000000000000000000000000000000000
.................GTGGCATGGCCGGTCGTCCTACCA..........................................................................................................................................................................................................................................................................................2411.001000000000100000000000000000000000000000000000000000000000000000
...............ACGTGGCATGGCCGGTCG..................................................................................................................................................................................................................................................................................................1811.001000000000000000000001000000000000000000000000000000000000000000
.......................................................................TTTGCAAGGATACTGCACCAAAGATGG.................................................................................................................................................................................................................................2711.001000000000000000000000000000001000000000000000000000000000000000
......................................................................ATTTGCAAGGATACTGCACC.........................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
.............................................................GCTCAAACCATTTGCAAG....................................................................................................................................................................................................................................................1811.001000000000000000000000000000001000000000000000000000000000000000
droMoj3
GCATC---ATGTTTG-----ACATGTCCTAACGATCACTTTCCAATCGCATTCAATT------------------------------------------------------------------------TTCATTTACTTATTTTATCTGTAACTTTATTTATATAATGAAGTGTATGTACATACGTGATTATTT-ATTTATTTATTTAT---TT-------------------------------------------------------------ATTTA-TTTATTTATTTT---------------------------CTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
CTTCGAATATCTCAGGCGTGGAATGGCTGGACGTCCTACCAGAACCCTCATTGAATTCATTGCGCAGACCATTTGCAAGGACACTGCGCCAAAAATGGGAAAATAAA---------ATTTGTAT--------------------------------------------------------------------------GCAATGTTA--------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
GTTTGAATATCTGCGACAGGGAATGGCTGGCCGCCCCACGCGAACCCTCATCGAGTTTATTGCGCAGACCATTTGCAAGGATACGGCACCCAAGCTTAACAAGTGATGATTAT-----------------------------------------------------------------------------CCTTGAAAATGGTGTTTTAC--GTTATATTGAGACGATGCCAC------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
ATTTGAATATCTGCGACAGGGTATGGCTGGCCGCCCCACGCGAACCCTCATCGAGTTTATTGCGCAGACCATTTGCAAGGATACGGCACCCAAGCTTAACAAGTGATGACTAT-----------------------------------------------------------------------------CCTTGAAAATGGTGTTTTAC--GTTATATTGAGACGATGCCAC------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
AA-----TACCTAAAGAAAAACCAAATCGAA-----------------------ATCCATTTTACCA-CTTCATACAAAAAAACCG---------------------------------GGAATTCAGATTTT------------------------------------------------------------------------------------------------------------------------------TATTTATTTATTTATTTATTAAGAATAGAAAATATCTGCCATTTTAAATCCATATCCTTACCTCSizeHit CountTotal NormTotal
No Reads
droFic1
GTTCGAGTATCTGCGACAGGGCATGGCAGGTCGGCCAACGAGGACACTCATCGAATTCATAGCGCAATCGATTTGCAAGGATACGGCTCCCAAGATCAACAAGTGAT-----------------------------------------------------------------------------------CGTTC-CAACGGTGTTTTAC--AGTTTA-TCAGACGATGCCACAC----------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
GTTCGAGTATCTACGACAGGGCATGGCTGGACGGCCAACGAGGACACTCATCGAGTTTATTGCGCAGTCCATATGCAAGGATACGGCTCCCAAGCTCAACAAATGAT-----------------------------------------------------------------------------------CCTTC-GAACGGTGTTTA-CTTGTTTTT-TCAGACGATGCCACAC----------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
GTTCGAGTATCTGCGACAGGGCATGGCCGGACGGCCCACAAGGACACTCATCGAGTTTATTGCGCAGTCTATATGCAAGGATACGGCTCCCAAGCTAAACAAGTGAT-----------------------------------------------------------------------------------CCTTC-GAACGGTGTTTA-CTAGTTTTA-TCTGACGATGCCACA-----------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
GTTCGAGTATCTGCGACAGGGCATGGCCGGACGGCCCACAAGGACACTCATCGAGTTTATTGCGCAGTCCATATGCAAGGACACGGCTCCCAAGCTAAACAAGTGAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
GTTCGAGTATCTGCGACAGGGGATGGCCGGGCGGCCAACGAGGACACTCATCGAGTTTATTGCGCAGTCCATATGCAAGGATACGGCGCCCAAGCTAAACAAGTGAT-----------------------------------------------------------------------------------ACGTG-GAACGGTGTTTTTG-TGTTTTA-TCAGACGATGCCACAC----------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
GTTTGAATATCTGCGAGAGGGCATGGCCGGACGGCCAACTAGGACACTCATAGAGTTTATTGCACAGTCCATATGCAAAGATACTGCCCCTAAGCTAAACAAGTGAG-----------------------------------------------------------------------------------GACTT-CAACGGTGTTTTA---ATTTTA-TCAGACGATGCCACAC----------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
GTTCGAGTATCTGCGAGAGGGCATGGCCGGACGTCCAACAAGGACACTCATCGAGTTTATTGCACAGTCCATATGCAAGGACACAGCTCCAAAGCTTAACAAGTGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............GCGAGAGGGCATGGCCGGAC...................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TATCTGCGAGAGGGCATGGCCG......................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................CGAGTTTATTGCACAGTCCAT...........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............GAGAGGGCATGGCCGGACGTCCAA.............................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
............................................CACTCATCGAGTTTATTGCACAGTCC.............................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............GAGAGGGCATGGCCGGACGT.................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.TTCGAGTATCTGCGAGAGGGC.............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................ACTCATCGAGTTTATTGCACA.................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................TGCAAGGACACAGCTCCAAAGC....................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GTTCGAGTATCTGCGAGAGGGCATGGCTGGACGTCCGACAAGGACACTCATCGAGTTCATTGCACAGTCCATATGCAAGGACACAGCTCCAAAGCTTAACAAGTGAT-----------------------------------------------------------------------------------CCTTC-GAACGGTGTTTTA---GTTTTA-TCAGACGATGCCACAC----------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................................AAGTGAT-----------------------------------------------------------------------------------CCTTC-GAACGGTG.......................................................................................................................2011.00100001000000000000
droSec2
GTTCGAGTATCTGCGAGAGGGCATGGCAGGACGTCCGACAAGGACACTCATCGAGTTTATTGCACAGTCCATATGCAAGGACACAGCTCCAAAGCTTAACAAGTGAT-----------------------------------------------------------------------------------CCTTC-GAACGGTGTTTTA---GTTTTA-TCAGACGATGCCACAC----------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
GTTCGAGTATCTGCGTCAGGGCATGGCCGGACGACCTACAAGGACACTCATCGAGTTTATTGCACAGTCCATTTGCAAGGACACAGCTCCAAAACTTAACAAGTGAT-----------------------------------------------------------------------------------CCTGC-GAACGGTGTTTTA---GTTTTA-TCAGACGATGCCACAC----------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................................................................................ACAAGTGAT-----------------------------------------------------------------------------------CCTGC-GAACGGTGT......................................................................................................................2311.00100000010000
.................................................................................................AACAAGTGAT-----------------------------------------------------------------------------------CCTGC-GAACGGT........................................................................................................................2211.00100000010000
droEre2
GTTCGAGTATCTGCGCCAGGGCATGGCCGGACGACCTACAAGGACACTCATCGAGTTTATTGCACAGTCCATATGCAAGGACACAGCTCCAAAACTTAACAAGTGAT-----------------------------------------------------------------------------------CCTTC-GAACAGTGTTTTA---GGTTTA-TTAGACGATGCCACAC----------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 06/08/2015 at 04:43 PM