ID:

dpe_1797

 Coordinate:

scaffold_50:280348-280386 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.1

Flybase annnotation

intron [Dper\GL10333-in]; exon [dper_GLEANR_10462:3]; exon [dper_GLEANR_10462:4]; CDS [Dper\GL10333-cds]; CDS [Dper\GL10333-cds]

Repeatable elements

NameClassFamilyStrand
(CAG)nSimple_repeatSimple_repeat+
mature
  1. scaffold_0:635067-635085 +
  2. scaffold_0:1511776-1511794 +
  3. scaffold_0:6498501-6498519 +
  4. scaffold_0:9944759-9944777 +
  5. scaffold_2:6588867-6588885 +
  6. scaffold_2:7888175-7888193 +
  7. scaffold_2:8407845-8407863 +
  8. scaffold_3:2195392-2195410 +
  9. scaffold_3:6655595-6655613 +
  10. scaffold_4:2644685-2644703 +
  11. scaffold_5:1874060-1874078 +
  12. scaffold_5:1874126-1874144 +
  13. scaffold_13:1359609-1359627 +
  14. scaffold_17:816000-816018 +
  15. scaffold_14:1918486-1918504 +
  16. scaffold_15:1683229-1683247 +
  17. scaffold_16:1663928-1663946 +
  18. scaffold_20:370182-370200 +
  19. scaffold_33:723668-723686 +
  20. dpe_1797  scaffold_50:280367-280385 +
star

Sense Strand Reads

##################################################---------------------------------------##################################################
AACAACAGCAACTGGCAGCAGCCGCCGCAGCGGCAGCAGCAGCAGCAGCGGTCGTCCAGCAGCAGCAGCAACAGCAGCAGCAGCAACAGCAGCAACAACCGATGCTCGTATCGATTCCCCAGCGAACGGCCAGCACGGG
**************************************************........((.((.((.((....)).)).)).)).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V042
embryo
 V057
head
...........................................AGCAGCGGTCGTCCAGCAGC............................................................................ 20 0 1 3.00 3 0 3 0 0
...........................................AGCAGCGGTCGTCCAGCAGCA........................................................................... 21 0 1 1.00 1 1 0 0 0
..................................AGCAGCAGCAGCAGCGGTCGTCCAGCAGG............................................................................ 29 1 1 1.00 1 0 1 0 0
..........................................................................................AGCAACAACCGATGCTCGT.............................. 19 0 1 1.00 1 1 0 0 0
..................................................................................................CCGATGCTCGTATCGATTCCC.................... 21 0 1 1.00 1 1 0 0 0
...........................................................................................GCAACAACCGGTGCTCGTATCGATTCCC.................... 28 1 1 1.00 1 0 0 1 0
...........................................AGCAGCGGGCGTCCAGCAGCAGCA........................................................................ 24 1 1 1.00 1 1 0 0 0
....................................................................................................GATGCTCGTATCGATTCCCC................... 20 0 1 1.00 1 1 0 0 0
..............................................AGCGGTCGTCCAGCAGCAGC......................................................................... 20 0 1 1.00 1 0 1 0 0
..................................AGCAGCAGCAGCAGCGGTC...................................................................................... 19 0 4 0.25 1 0 0 1 0
........................CCTCAGCGGCAGCAGCAGCA............................................................................................... 20 1 20 0.05 1 0 0 1 0
..........ACTGGTAGCGGACGCCGCA.............................................................................................................. 19 3 20 0.05 1 0 0 0 1
.....................................................................AACAGCAGCAGCAGCAACA................................................... 19 0 20 0.05 1 1 0 0 0
.............................................................GCAGCAGCAACAGCAGCAGCAGC....................................................... 23 0 20 0.05 1 1 0 0 0
.................................................................CAGCAACAGCAGCAGCAGCAACA................................................... 23 0 20 0.05 1 1 0 0 0
.....................................................................AACAGCAGCAGCAGCAACAGCA................................................ 22 0 20 0.05 1 0 0 1 0
..................................................................AGCAACAGCAGCAGCAGCAACAGCA................................................ 25 0 20 0.05 1 0 0 1 0
..........................................................................CAGCAGCAGCAACAGCAGC.............................................. 19 0 20 0.05 1 0 0 1 0
......................................................................ACAGCAGCAGCAGCAACAGCAGC.............................................. 23 0 20 0.05 1 1 0 0 0

Anti-sense strand reads

TTGTTGTCGTTGACCGTCGTCGGCGGCGTCGCCGTCGTCGTCGTCGTCGCCAGCAGGTCGTCGTCGTCGTTGTCGTCGTCGTCGTTGTCGTCGTTGTTGGCTACGAGCATAGCTAAGGGGTCGCTTGCCGGTCGTGCCC
**************************************************........((.((.((.((....)).)).)).)).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_50:280298-280436 + dpe_1797 AACAACAGCAACTG--GCAGCAGCCGCCGCAG---CGGCAGCAGCAGCAGCA---G---CGGTCG-TCCAGCAGCA---G---CAGCA---ACAGCAGCAGC------------------AGCAACAGCAG---CAACA------ACC------G-ATGCTC-GTATCGATTCCCCAG--------------CG----AA---CGGCC---AGCA-CG-------------GG
dp5 XR_group8:8925802-8925934 - dps_3396 AACAACAGCAACTG--GCAGCAGCCGCCGCAG---CGGCAGCAGCAGCAGCA---G---CCGTCG--------TC-----C---AGCAACAGCAGCAGCAGC------------------AGCAACAGCAG---CAACA------GCC------G-ATGCTC-GTATCGATTCCCCAG--------------CG----AA---CGGCC---AGCA-CG-------------GG
droWil2 scf2_1100000004511:8217746-8217887 - AGCAACAGCAACAACAGCAGCA---GCAGCAA---CAACAAT------T--------GGCAGTAGC---AGCGGCA---G---CAGCA---G---CAGCAGT---AGTTGTGGCT-CAACAGCAACAGCAG---CAACA------ACC---AC-CCATGTTG-GTGGCAATACCACAG--------------CG----AA---CAGCC---AGCA-CA-------------GG
droVir3 scaffold_13561:126526-126660 + AACAACAGCAGCAGCAGCAGCA---GCAGCCG---CAGCAGCAGCAGCCGCA---G---CAGC------AGCCGCA---GC---AGCA---GCAGCAGCAAC---------AG---C---AGCCGCAGCAGCAGCAGCAGCAACAGCA------G-CCGCA----GCAGCAGCAGCAG--------------CA------------------ACAGCA-------------GC
droMoj3 scaffold_6473:10898373-10898507 + AACAGCAGCAGCAGCAGCAGCA---GCAGCAG---CAGCAGCAGCAACAGCA---G---CAGC------AGCAGCA---GC---AGCA---GCAACAGCAGC---------AG---C---AACAACAGCAG---CAACAGCA---GCAGCAACAG-CAGCA----ACAGCAGCA-------------------------A---CA-GC---AGCAACA-------------GC
droGri2 scaffold_14664:1421-1548 - AGCAGCAGCAGCAGCAGCAGCA---GCAGCAG---CAGCAGCAGCAGCAGCA---G---CAGC------AGCAGCA---GC---AGCA---GCAGCAGCAGC---------AG---C---AGCAGCAGCAG---CATCAGCA---GCG----------GCA----GCAGCAGCAGCAG--------------CG------------GC---AGCA-GC-------------AG
droAna3 scaffold_13117:4508346-4508483 - AGCAACAGCACCTGCATCAGCA---ACAACTG---CAGCCACATCAGCAGCA---A---ATGCAACACCATCAGCA---GC---AACAACAGCAGCAGCAGC------------------AGCAACAGCAT---CAGCA------ACT------G-TTGCAC-GAATCGCAGCAGCAG--------------CA------------AC---AGCAGCA-------------GC
droBip1 scf7180000395839:108463-108598 + AACAACAGCAACAGCAACAGCA---GCAGCAG---CATCAGCAGCAGCAACA---G---CAAC------AGCAGCA---AC---AACAACAA---CAGCTGC---------AA---C---AGCAACTGCAA---CAACAGCA---G----------ATGTT----GCAGATGCACCAG--------------CG----GT---TGTCCGGTGGCG-CT-------------GG
droKik1 scf7180000302474:303707-303833 - AGCACCAGCAGCAGCAACAGCA---GCAGCAA---CT--------------------GGCAGCCGC---AGCAGCA---G---CGGCC---G---CCGCAGC---AGCCGCCGCC-------CAGCAGCAG---CAGAT------GCC------G-ATGCTG-GTATCCATGCCCCAG--------------CG----CA---CGGCC---AGTA-CC-------------GG
droFic1 scf7180000453833:859471-859609 + TGCAACACCAGCAGCAGCAGCA---GCACCAG---CAGC---AGCAGCAGCAACT--CGCCGTCGC---AGCAGCA---G---CGGCG---G---CAGCAGC---AGCGGT---C-------CAGCAGCAG---CAGCA------GCA------G-ATGGTT-GTGTCCATGCCACAG--------------CG----GA---CCGCC---AGCA-CC-------------GG
droEle1 scf7180000491268:7678-7816 - TGCAGCACCAGCACCAGCAACA---GCAGCAA---CAGCAGCAGCAACT--------GGCCGTCGC---AGCAGCA---G---CAGCG---G---CAGCAGT---GGCCGC---C-C---AGCAGCAGCAG---CAGCA------GCC------C-CTGCTG-GTGGCCATGCCTCAG--------------CG----GA---CGGCC---AGCA-CC-------------GG
droRho1 scf7180000776935:46791-46927 + AGCAACAGCAACACC--CAGCA---GCAACAG---CAG---CAGCAGCAGCA---CGAGATGACCC---AGCAGCA---G---CAGCA---ACAGCAGCAGCAGCAGC---AGC------AGCAACAGCAG---CAGCA------GCC------G-CATCAGGATCCGGACTCCGCGG--------------CG-----------GC------CA-CG-------------GC
droBia1 scf7180000298389:213022-213150 - AACAACAACAACAACAACAGCA---GCAGCAG---CAGCAGCAACAGCAGCA---A---CAAC------AACAGCA---GC---AGCA---ACAGCAGCAGC---------AG---C---AACAACAGCAA---CAGCAGCA---G----------CAGCA-----ACAACAA----------------------------------------CA-CACCCAACGGTGCGCAG
droTak1 scf7180000415376:173959-174086 - AATACCATCCACAGCAGCAACA---GCAACAG---CAGCAACAGCAGCAGCA---G---CAGC------AACACCA---GC---AGCA---GCAGCAGCTGC---------AG---C---AGCAACTGCAG---CAGCAGCA---G----------ATGCT----GCAGATGCACCAG--------------CG----TC---TGTC---------CG-------------GC
droEug1 scf7180000409538:198003-198145 + ATCAGCAGCAGCACGCCCAGCA---GCTGCAACACCAACAGCTGCAGCAGCAACA--CGCC-C------AGCAGCA---A---CATCA---GCAGCAGCATC---------AT---C---ATCACCAGCAA---CACCAGCA---GCT------G-CATCAT-GATCCCCAGCAACAG--------------CA----TC---C--GC---AGTA-CC-------------AT
dm3 chrX:6811789-6811931 + AGCAGCAGCAGCACTACCAGCA---GCAGTTT---CAGCAGCAGCAGCAGCA---A---CAGC------AGCAACA---GC---AGCA---GCAGCTGC------------AACAGCAACAGCAGCAGCAG---CAACA------TCT------G-ACACCC-------A--CGGCAGCACTTGCCCAGCAGCA-----G---CA-GC---AGCA-TG-------------AG
droSim2 2l:3213031-3213156 - AACATCAGCAGCAGCATCAGCA---GCAGCAT---CAGCAGCAGCATCAGC---------AGTCGC---ATCAGCA---G---CCGCA---TCAGCAGTCGC------------------AGCAGCAGCAA---CAACA------GCC------G---GCAA-TTATAAATTCAACAA--------------CG----AC-GACGGCC---A---------------------
droSec2 scaffold_4:362536-362676 - ATCAAGTGCAGCAGCAGCAGCA---GCAGCAT---CAGCACCAGCATCAGCA---A---CAGC------ATCAACAGCAGCAACATCA---TCACCAGCATC------------------AGCAACAGCAG---CAACA------CCAGATGCAG----CAC-CATCAGATCCATCAT--------------CA----GACGGCGCCC---A-----G-------------GA
droYak3 2R:18746430-18746555 + AACAACAGCAACCGCATCAGCA---GCAACAA---CAGCAGCAGCAACAACA---A---CAGC------AGCAGCA---A------CAACAACAGCAGCAGC------------------AACAACAGCAG---CAACA------ACA------A-ATGCA--GCAGCAA----------------------CAAATAAA---C--GC---AGTG-CA-------------AA
droEre2 scaffold_4929:12168749-12168865 - TCCAGCAGCAACAGCAGCAACA---GCTGCAA---CAGCAGCAGCAGCAGCA---G---CAGC------AGCAGCA---GC---TGCA---ACAGCAGCAGC---------AG---C---AGCAGCAGCAA---CAACAGCA---G----------CAGCA--------------------------------------A---CAGGC---AGCT-CA-------------AT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
AACAACAGCAACTG--GCAGCAGCCGCCGCAG---CGGCAGCAGCAGCAGCA---G---CGGTCG-TCCAGCAGCA---G---CAGCA---ACAGCAGCAGC------------------AGCAACAGCAG---CAACA------ACC------G-ATGCTC-GTATCGATTCCCCAG--------------CG----AA---CGGCC---AGCA-CG-------------GGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................AGCA---G---CGGTCG-TCCAGCAGC..............................................................................................................................................................2013.003300000
................................................AGCA---G---CGGTCG-TCCAGCAGCA---..........................................................................................................................................................2111.001010000
.......................................AGCAGCAGCAGCA---G---CGGTCG-TCCAGCAGG..............................................................................................................................................................2911.001100000
.................................................................................................................................AG---CAACA------ACC------G-ATGCTC-GT....................................................................1911.001010000
..................................................................................................................................................CC------G-ATGCTC-GTATCGATTCCC..........................................................2111.001010000
..........................................................................................................................................................G-ATGCTC-GTATCGATTCCCC.........................................................2011.001010000
...................................................A---G---CGGTCG-TCCAGCAGCA---G---C.....................................................................................................................................................2011.001100000
.......................................AGCAGCAGCAGCA---G---CGGTC.........................................................................................................................................................................1940.251001000
.......................................................................................A---ACAGCAGCAGC------------------AGCAACA..........................................................................................................19200.051010000
.........................................................................GCA---G---CAGCA---ACAGCAGCAGC------------------AGC..............................................................................................................23200.051010000
...................................................................................CAGCA---ACAGCAGCAGC------------------AGCAACA..........................................................................................................23200.051010000
.......................................................................................A---ACAGCAGCAGC------------------AGCAACAGCA.......................................................................................................22200.051001000
....................................................................................AGCA---ACAGCAGCAGC------------------AGCAACAGCA.......................................................................................................25200.051001000
...............................................................................................CAGCAGC------------------AGCAACAGCAG---C..................................................................................................19200.051001000
...........................................................................................ACAGCAGCAGC------------------AGCAACAGCAG---C..................................................................................................23200.051010000
dp5
AACAACAGCAACTG--GCAGCAGCCGCCGCAG---CGGCAGCAGCAGCAGCA---G---CCGTCG--------TC-----C---AGCAACAGCAGCAGCAGC------------------AGCAACAGCAG---CAACA------GCC------G-ATGCTC-GTATCGATTCCCCAG--------------CG----AA---CGGCC---AGCA-CG-------------GGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................GCAG---CAACA------GCC------G-ATGCTC-GT....................................................................2111.0010100000000
.................................................................................................................................................................C-GTATCGATTCCCCAG--------------CG----AA---..............................2011.0010100000000
.........................................................................................................................................CA------GCC------G-ATGCTC-GTATCGATT.............................................................2111.0010100000000
..........................................AGCAGCAGCA---G---CCGTCG--------TC-----C---AGCAAC...............................................................................................................................................2611.0010100000000
.....................................................................................................................................................................ATCGATTCCCCAG--------------CG----AA---CGGC..........................2111.0010100000000
..........................................................................................................................................A------GCC------G-ATGCTC-GTATCGATTCCCCAG--------------.........................................2611.0010010000000
.....................................................................................................................................................................ATCGATTCCCCAG--------------CG----AA---CGGCC---......................2211.0010100000000
.......................................................G---CCGTCG--------TC-----C---AGCAACAGC............................................................................................................................................1911.0010100000000
...............................................................................................................................GCAG---CAACA------GCC------G-ATGCTC-GTATC.................................................................2411.0010010000000
..............................................................TCG--------TC-----C---AGCAACAGCAGCAGCAGC------------------A................................................................................................................2511.0010100000000
..............................................................................................................................AGCAG---CAACA------GCC------G-ATGCTC-......................................................................2011.0010100000000
...........................................GCAGCAGCA---G---CCGTCG--------TC-----C---.....................................................................................................................................................1911.0010010000000
................................................................................................................................CAG---CAACA------GCC------G-ATGCTC-GTATC.................................................................2311.0010100000000
............................................................CGTCG--------TC-----C---AGCAACAGCAGCAGC......................................................................................................................................2311.0010100000000
.......................................................G---CCGTCG--------TC-----C---AGCAACAGCAG..........................................................................................................................................2111.0010100000000
................................................AGCA---G---CCGTCG--------TC-----C---AGCAACAGCAGC.........................................................................................................................................2611.0010100000000
.......................................................................................................................................AACA------GCC------G-ATGCTC-GTATCGAT..............................................................2211.0010100000000
.........................................................................................................................GCAACAGCAG---CAACA------GCC------G-ATGCTC-GT....................................................................2711.0010100000000
................................................AGCA---G---CCGTCG--------TC-----C---AGCAACA..............................................................................................................................................2111.0010100000000
.............................................................GTCG--------TC-----C---AGCAACAGCAGCAGCA.....................................................................................................................................2311.0010100000000
........................................GCAGCAGCAGCA---G---CCGTCG--------TC-----C---AGC..................................................................................................................................................2511.0010100000000
..............................................GCAGCA---G---CCGTCG--------TC-----C---AGCAACAGCA...........................................................................................................................................2611.0010100000000
.............................................................GTCG--------TC-----C---AGCAACAGCAGC.........................................................................................................................................1911.0010100000000
.................................................GCA---G---CCGTCG--------TC-----C---AGCAACAGCAGCAGC......................................................................................................................................2811.0010100000000
.............................CAG---CGGCAGCAGCAGCAGCA---G---CC............................................................................................................................................................................2370.1410100000000
.......................................AGCAGCAGCAGCA---G---CCGTC.........................................................................................................................................................................19100.1010100000000
................................................................................C---AGCAACAGCAGCAGCAGC------------------AGCAACAG.........................................................................................................27200.0510100000000
....................................GGCAGCAGCAGCAGCA---G---CC............................................................................................................................................................................19200.0510100000000
droWil2
AGCAACAGCAACAACAGCAGCA---GCAGCAA---CAACAAT------T--------GGCAGTAGC---AGCGGCA---G---CAGCA---G---CAGCAGT---AGTTGTGGCT-CAACAGCAACAGCAG---CAACA------ACC---AC-CCATGTTG-GTGGCAATACCACAG--------------CG----AA---CAGCC---AGCA-CA-------------GGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................GCAA---CAACAAT------T--------GGCAGTAGC---AGCGGC..............................................................................................................................................................2712.00200200
.................................................................................................GCAGT---AGTTGTGGCT-CAACAGC..............................................................................................................2212.00202000
...............................A---CAACAAT------T--------GGCAGTAGC---AGCGGCA---G---C.....................................................................................................................................................2711.00100010
.............................................................GTAGC---AGCGGCA---G---CAGCA---G---CAGCAGT---AG..............................................................................................................................2811.00100010
.......................................AAT------T--------GGCAGTAGC---AGCGGCA---G---......................................................................................................................................................2111.00100100
....................................AACAAT------T--------GGCAGTAGC---AGCGGCA---G---C.....................................................................................................................................................2511.00100010
..............................AA---CAACAAT------T--------GGCAGTAGC---AGCGGC..............................................................................................................................................................2511.00100100
...............................................................................G---CAGCA---G---CAGCAGT---AGTTGTGGC.......................................................................................................................2311.00100100
.........................................T------T--------GGCAGTAGC---AGCGGCA---G---CAGCA---..............................................................................................................................................2411.00100100
.........................GCAGCAA---CAACAAT------T--------GGCA............................................................................................................................................................................1911.00101000
............................GCAA---CAACAAT------T--------GGCAGTAGC---AGC.................................................................................................................................................................2411.00100100
..............................................................................................................................AGCAG---CAACA------ACC---AC-CCATGT.........................................................................2111.00100010
..............................AA---CAACAAT------T--------GGCAGTAGC---AGC.................................................................................................................................................................2211.00100100
...........................................................................................G---CAGCAGT---AGTTGTGGCT-CAACAGC..............................................................................................................2511.00101000
.............................................................................................................................CAGCAG---CAACA------ACC---AC-CCATGTTG-GT....................................................................2611.00101000
..............................................................................................................TGGCT-CAACAGCAACAGCAG---C..................................................................................................2111.00101000
....................................................................................................GT---AGTTGTGGCT-CAACAGCAACA..........................................................................................................2311.00101000
..............................AA---CAACAAT------T--------GGCAGTAGC---....................................................................................................................................................................1911.00100010
...............................A---CAACAAT------T--------GGCAGTAGC---AGC.................................................................................................................................................................2111.00100100
.................CAGCA---GCAGCAA---CAACAAT------T--------GG..............................................................................................................................................................................2220.50100001
.................................................................................................................CT-CAACAGCAACAGCAG---C..................................................................................................1840.25100010
............................................................AGTAGC---AGCGGCA---G---CAGCA---G---CA........................................................................................................................................2260.17100100
...AACAGCAACAACAGCAGCA---GCAGCAA---C.....................................................................................................................................................................................................27170.12200020
............................................................AGTAGC---AGCGGCA---G---CAGCA---..............................................................................................................................................1990.11100100
..........................................................GCAGTAGC---AGCGGCA---G---CAGC..................................................................................................................................................2090.11100100
.....................A---GCAGCAA---CAACAAT------T--------GGG.............................................................................................................................................................................1990.11100001
.............................................................GTAGC---AGCGGCA---G---CAGCA---..............................................................................................................................................18100.10100100
............................................................AGTAGC---AGCGGCA---G---CAGC..................................................................................................................................................18110.09100010
..CAACAGCAACAACAGCAGCA---GCAG............................................................................................................................................................................................................24200.05101000
....ACAGCAACAACAGCAGCA---G...............................................................................................................................................................................................................19200.05100010
............AACAGCAGCA---GCAGCAA---CAAC..................................................................................................................................................................................................21200.05101000
droVir3
AACAACAGCAGCAGCAGCAGCA---GCAGCCG---CAGCAGCAGCAGCCGCA---G---CAGC------AGCCGCA---GC---AGCA---GCAGCAGCAAC---------AG---C---AGCCGCAGCAGCAGCAGCAGCAACAGCA------G-CCGCA----GCAGCAGCAGCAG--------------CA------------------ACAGCA-------------GCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..CAACAGCAGCAGCAGCAGCA---GCAGC...........................................................................................................................................................................................................25200.204003000000000000000000000000000000000100000000000000000000000000
........................................................................CGCA---GC---AGCA---GCAGCAGCA.....................................................................................................................................19200.153003000000000000000000000000000000000000000000000000000000000000
..............................................................................................GCAGCAAC---------AG---C---AGCCGCAGCAGC.....................................................................................................2370.141001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................GCAGCAACAGCA------G-CCGCA----GCAGC...............................................................2370.141001000000000000000000000000000000000000000000000000000000000000
..............................CG---CAGCAGCAGCAGCCGCA---G---CA............................................................................................................................................................................2270.141000000000000000000000000000000010000000000000000000000000000000
...................................CAGCAGCAGCAGCCGCA---G---CAG...........................................................................................................................................................................21200.102000000000000000000000000000000020000000000000000000000000000000
.........................................................................................................................GCCGCAGCAGCAGCAGCAGCA...........................................................................................21200.102002000000000000000000000000000000000000000000000000000000000000
AACAACAGCAGCAGCAGCAGCA---GCA.............................................................................................................................................................................................................25200.102000000000000000000000020000000000000000000000000000000000000000
..........................................................................................................................................................G-CCGCA----GCAGCAGCAGCAG--------------CA------------------.....................21200.102002000000000000000000000000000000000000000000000000000000000000
.........................................CAGCAGCCGCA---G---CAGC------AGCCG...............................................................................................................................................................21160.061001000000000000000000000000000000000000000000000000000000000000
....................................................................................AGCA---GCAGCAGCAAC---------AG---C---AGCCGC...........................................................................................................24170.061000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................AGCAGCAGCAGCAACAGCA------G-CCGC.........................................................................24170.061000000000000000000000000000000000000100000000000000000000000000
...............................................CCGCA---G---CAGC------AGCCGCA---GC---AGC..................................................................................................................................................22180.061000000000000000000000000000000010000000000000000000000000000000
........................................................................................................................................GCAGCAACAGCA------G-CCGCA----GC..................................................................20190.051000100000000000000000000000000000000000000000000000000000000000
..............................................................................................GCAGCAAC---------AG---C---AGCCGCAGC........................................................................................................20190.051000100000000000000000000000000000000000000000000000000000000000
.....................................................................................GCA---GCAGCAGCAAC---------AG---C---AGC..............................................................................................................20200.051000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................CAGCAGCAGCAGCAGCAACAGCA------G-C............................................................................25200.051000100000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................GCAACAGCA------G-CCGCA----GCAGC...............................................................20200.051000000000000000000000000000000000000000000000000000000000001000
.............GCAGCAGCA---GCAGCCG---CAGC..................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................G-CCGCA----GCAGCAGCAGCAG--------------CA------------------AC...................23200.051001000000000000000000000000000000000000000000000000000000000000
................................................CGCA---G---CAGC------AGCCGCA---GC---AG...................................................................................................................................................20200.051000000000000000000000000000000100000000000000000000000000000000
..................................................................................................................................GCAGCAGCAGCAACAGCA------G-C............................................................................20200.051000000000000000000000000000000000010000000000000000000000000000
.............................................AGCCGCA---G---CAGC------AGCCGCA---GC---.....................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
.................CAGCA---GCAGCCG---CAGCAGCAG.............................................................................................................................................................................................21200.051000000000000000000000000001000000000000000000000000000000000000
.........................................................................GCA---GC---AGCA---GCAGCAGCAAC---------AG---C---A................................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
...............................................CCGCA---G---CAGC------AGCCGCA---GC---AG...................................................................................................................................................21200.051000000000000000000000010000000000000000000000000000000000000000
............................................CAGCCGCA---G---CAGC------AGCCG...............................................................................................................................................................18200.051001000000000000000000000000000000000000000000000000000000000000
AACAACAGCAGCAGCAGCAGCA---GCAGC...........................................................................................................................................................................................................27200.051000000000000000000000000000000000000000000000000000000000001000
.................................................GCA---G---CAGC------AGCCGCA---GC---AGCA---GCAGC.........................................................................................................................................26200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................GC------AGCCGCA---GC---AGCA---GCAGCAGCA.....................................................................................................................................24200.051000000000000000000000000000010000000000000000000000000000000000
..............................................................................................................................................................GCA----GCAGCAGCAGCAG--------------CA------------------ACAGCA-------------..24200.051001000000000000000000000000000000000000000000000000000000000000
....ACAGCAGCAGCAGCAGCA---GC..............................................................................................................................................................................................................20200.051000000000000000000000000001000000000000000000000000000000000000
.................................................GCA---G---CAGC------AGCCGCA---GC---AGCA---GCAGCA........................................................................................................................................27200.051001000000000000000000000000000000000000000000000000000000000000
......................................................................GCCGCA---GC---AGCA---GCAGCAGCAAC---------..........................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................AGCAGCAACAGCA------G-CCGCA----....................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................GCCGCAGCAGCAGCAGCAGCAAC.........................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................GCA----GCAGCAGCAGCAG--------------CA------------------ACAGC................23200.051000000000000000000000000010000000000000000000000000000000000000
..........................................................................CA---GC---AGCA---GCAGCAGCAAC---------AG---C---AGC..............................................................................................................25200.051000100000000000000000000000000000000000000000000000000000000000
.....................................GCAGCAGCAGCCGCA---G---CAGC------A...................................................................................................................................................................21200.051000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................C---------AG---C---AGCCGCAGCAGCAGCAG................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
.....................................................................................GCA---GCAGCAGCAAC---------AG---C---AGCC.............................................................................................................21200.051000000000000001000000000000000000000000000000000000000000000000
..........................................AGCAGCCGCA---G---CAGC------AGCC................................................................................................................................................................19200.051000000000000000000001000000000000000000000000000000000000000000
............................................CAGCCGCA---G---CAGC------AGCCGCA---G.........................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
..........GCAGCAGCAGCA---GCAGCCG---CAG...................................................................................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................GCAGCAGCAGCAGCAGCAACAGCA------...............................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
...............AGCAGCA---GCAGCCG---CAGCAGC...............................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
.........................................................................GCA---GC---AGCA---GCAGCAGCAAC---------AG---C---.................................................................................................................23200.051000000000000000000000000010000000000000000000000000000000000000
..................................................................................................................................GCAGCAGCAGCAACAGCA------G-CC...........................................................................21200.051000000000000001000000000000000000000000000000000000000000000000
............................................................................................................................GCAGCAGCAGCAGCAGCAACAGC......................................................................................23200.051000000000000000000000000010000000000000000000000000000000000000
...............................................................................................................................................................CA----GCAGCAGCAGCAG--------------CA------------------ACAGCA-------------GC25200.051000100000000000000000000000000000000000000000000000000000000000
................GCAGCA---GCAGCCG---CAGCAGCAGCAGC.........................................................................................................................................................................................26200.051001000000000000000000000000000000000000000000000000000000000000
..................................................CA---G---CAGC------AGCCGCA---GC---AGCA---G.............................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
.................................................................................................GCAAC---------AG---C---AGCCGCAGCAGC.....................................................................................................20200.051000000000000000000000000000000000000000000000000000000000001000
.............................................................................................AGCAGCAAC---------AG---C---AGCCGCA..........................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................CAGCA------G-CCGCA----GCAGCAGCAG..........................................................21200.051001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................GCAGCAGCAG--------------CA------------------ACAGCA-------------GC20200.051000000000000000000000000000000000010000000000000000000000000000
droMoj3
AACAGCAGCAGCAGCAGCAGCA---GCAGCAG---CAGCAGCAGCAACAGCA---G---CAGC------AGCAGCA---GC---AGCA---GCAACAGCAGC---------AG---C---AACAACAGCAG---CAACAGCA---GCAGCAACAG-CAGCA----ACAGCAGCA-------------------------A---CA-GC---AGCAACA-------------GCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................................................................................CAGCAACAG-CAGCA----ACAGC...............................................................19200.204400000
................................................................................C---AGCA---GCAACAGCAGC---------AG---C---AAC..............................................................................................................22200.153000030
..........GCAGCAGCAGCA---GCAGCAG---CAGCA.................................................................................................................................................................................................24200.153300000
..................................................................................................................................................CAGCAACAG-CAGCA----ACAGCAGC............................................................22200.102020000
..............................................................................................ACAGCAGC---------AG---C---AACAACAGC........................................................................................................20200.102000020
.............................................................................................................................CAGCAG---CAACAGCA---GCAGC...................................................................................19200.102200000
...................................................................................................................................................AGCAACAG-CAGCA----ACAGCAG.............................................................20200.102200000
.............................................................................................................................CAGCAG---CAACAGCA---GCAGCAAC................................................................................22200.051000001
.........................................................................................................................ACAACAGCAG---CAACAGCA---........................................................................................18200.051100000
.........................................................................GCA---GC---AGCA---GCAACAGCAGC---------AG---C---AACAAC...........................................................................................................29200.051000010
..............................................................................................ACAGCAGC---------AG---C---AACAACA..........................................................................................................18200.051100000
......................................................................................................................................CAACAGCA---GCAGCAACAG-CAGC.........................................................................22200.051100000
.............................................................................................AACAGCAGC---------AG---C---AACAACAGCAG---CA.................................................................................................25200.051100000
...........................................................................................................................................GCA---GCAGCAACAG-CAGCA----ACAGCAG.............................................................25200.051100000
.......................................................................................A---GCAACAGCAGC---------AG---C---AACAACAGCAG---C..................................................................................................27200.051000010
............................................................................................................................ACAGCAG---CAACAGCA---GCAGCAAC................................................................................23200.051100000
........................................GCAGCAACAGCA---G---CAGC------AGCAGCA---GC---.....................................................................................................................................................26200.051000010
.........................................................................GCA---GC---AGCA---GCAACAGCAGC---------AG---C---A................................................................................................................24200.051010000
.................................................................................................GCAGC---------AG---C---AACAACAGCAG---CAACAGC............................................................................................26200.051100000
......................................................................GCAGCA---GC---AGCA---GCAACAGCAGC---------AG---C---AAC..............................................................................................................29200.051000010
...................................CAGCAGCAGCAACAGCA---G---CAGC------AGCA................................................................................................................................................................26200.051100000
.....................A---GCAGCAG---CAGCAGCAGCAACAG.......................................................................................................................................................................................23200.051100000
.....................A---GCAGCAG---CAGCAGCAGCAACAGC......................................................................................................................................................................................24200.051100000
...............................................................................GC---AGCA---GCAACAGCAGC---------A.........................................................................................................................18200.051000010
......................................................................................CA---GCAACAGCAGC---------AG---C---AACAACAG.........................................................................................................24200.051000010
................................................................................................................................................................A----ACAGCAGCA-------------------------A---CA-GC---AGCA..................19200.051001000
....................................................................................................................C---AACAACAGCAG---CAACAGCA---........................................................................................20200.051000010
........................................................................................................................AACAACAGCAG---CAACAGCA---GCAGC...................................................................................24200.051100000
droGri2
AGCAGCAGCAGCAGCAGCAGCA---GCAGCAG---CAGCAGCAGCAGCAGCA---G---CAGC------AGCAGCA---GC---AGCA---GCAGCAGCAGC---------AG---C---AGCAGCAGCAG---CATCAGCA---GCG----------GCA----GCAGCAGCAGCAG--------------CG------------GC---AGCA-GC-------------AGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..........................CAGCAG---CAGCAGCAGCAGC.........................................................................................................................................................................................19200.25550
......AGCAGCAGCAGCAGCA---GCAGCAG---CA....................................................................................................................................................................................................25200.10220
...............................................................................................................................................................CA----GCAGCAGCAGCAG--------------CG------------GC---A.....................20200.05101
droAna3
AGCAACAGCACCTGCATCAGCA---ACAACTG---CAGCCACATCAGCAGCA---A---ATGCAACACCATCAGCA---GC---AACAACAGCAGCAGCAGC------------------AGCAACAGCAT---CAGCA------ACT------G-TTGCAC-GAATCGCAGCAGCAG--------------CA------------AC---AGCAGCA-------------GCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................................................AGC------------------AGCAACAGCAT---CAGCA------ACT------G-.............................................................................2320.501100000
.....................................................................ATCAGCA---GC---AACAACAGCAGCAGCAGC------------------.................................................................................................................2760.171010000
.....................................................................ATCAGCA---GC---AACAACAGCAGC.........................................................................................................................................2190.111010000
.............................................................................................AGCAGCAGC------------------AGCAACAGCAT---CA.................................................................................................22120.081000001
....................................................................................AACAACAGCAGCAGCAGC------------------AGCAAC...........................................................................................................24200.051010000
........................................................................................................................................................................GCAGCAGCAG--------------CA------------AC---AGCAGC................20200.051000010
...........................................................................A---GC---AACAACAGCAGCAGCAGC------------------AGCA.............................................................................................................25200.051001000
........................................................................AGCA---GC---AACAACAGCAGCAGCAGC------------------.................................................................................................................24200.051100000
...........................................................................A---GC---AACAACAGCAGCAGCAG....................................................................................................................................20200.051010000
droBip1
AACAACAGCAACAGCAACAGCA---GCAGCAG---CATCAGCAGCAGCAACA---G---CAAC------AGCAGCA---AC---AACAACAA---CAGCTGC---------AA---C---AGCAACTGCAA---CAACAGCA---G----------ATGTT----GCAGATGCACCAG--------------CG----GT---TGTCCGGTGGCG-CT-------------GGSizeHit CountTotal NormTotal
No Reads
droKik1
AGCACCAGCAGCAGCAACAGCA---GCAGCAA---CT--------------------GGCAGCCGC---AGCAGCA---G---CGGCC---G---CCGCAGC---AGCCGCCGCC-------CAGCAGCAG---CAGAT------GCC------G-ATGCTG-GTATCCATGCCCCAG--------------CG----CA---CGGCC---AGTA-CC-------------GGSizeHit CountTotal NormTotal
No Reads
droFic1
TGCAACACCAGCAGCAGCAGCA---GCACCAG---CAGC---AGCAGCAGCAACT--CGCCGTCGC---AGCAGCA---G---CGGCG---G---CAGCAGC---AGCGGT---C-------CAGCAGCAG---CAGCA------GCA------G-ATGGTT-GTGTCCATGCCACAG--------------CG----GA---CCGCC---AGCA-CC-------------GGSizeHit CountTotal NormTotal
No Reads
droEle1
TGCAGCACCAGCACCAGCAACA---GCAGCAA---CAGCAGCAGCAACT--------GGCCGTCGC---AGCAGCA---G---CAGCG---G---CAGCAGT---GGCCGC---C-C---AGCAGCAGCAG---CAGCA------GCC------C-CTGCTG-GTGGCCATGCCTCAG--------------CG----GA---CGGCC---AGCA-CC-------------GGSizeHit CountTotal NormTotal
No Reads
droRho1
AGCAACAGCAACACC--CAGCA---GCAACAG---CAG---CAGCAGCAGCA---CGAGATGACCC---AGCAGCA---G---CAGCA---ACAGCAGCAGCAGCAGC---AGC------AGCAACAGCAG---CAGCA------GCC------G-CATCAGGATCCGGACTCCGCGG--------------CG-----------GC------CA-CG-------------GCSizeHit CountTotal NormTotal
No Reads
droBia1
AACAACAACAACAACAACAGCA---GCAGCAG---CAGCAGCAACAGCAGCA---A---CAAC------AACAGCA---GC---AGCA---ACAGCAGCAGC---------AG---C---AACAACAGCAA---CAGCAGCA---G----------CAGCA-----ACAACAA----------------------------------------CA-CACCCAACGGTGCGCAGSizeHit CountTotal NormTotal
No Reads
droTak1
AATACCATCCACAGCAGCAACA---GCAACAG---CAGCAACAGCAGCAGCA---G---CAGC------AACACCA---GC---AGCA---GCAGCAGCTGC---------AG---C---AGCAACTGCAG---CAGCAGCA---G----------ATGCT----GCAGATGCACCAG--------------CG----TC---TGTC---------CG-------------GCSizeHit CountTotal NormTotal
No Reads
droEug1
ATCAGCAGCAGCACGCCCAGCA---GCTGCAACACCAACAGCTGCAGCAGCAACA--CGCC-C------AGCAGCA---A---CATCA---GCAGCAGCATC---------AT---C---ATCACCAGCAA---CACCAGCA---GCT------G-CATCAT-GATCCCCAGCAACAG--------------CA----TC---C--GC---AGTA-CC-------------ATSizeHit CountTotal NormTotal
No Reads
dm3
AGCAGCAGCAGCACTACCAGCA---GCAGTTT---CAGCAGCAGCAGCAGCA---A---CAGC------AGCAACA---GC---AGCA---GCAGCTGC------------AACAGCAACAGCAGCAGCAG---CAACA------TCT------G-ACACCC-------A--CGGCAGCACTTGCCCAGCAGCA-----G---CA-GC---AGCA-TG-------------AGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................................................................................................................................................................GCAGCACTTGCCCAGCAGCA-----G---CA-GC---AGCG-.................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................CA---A---CAGC------AGCAACA---GC---AGCA---G.............................................................................................................................................21200.70140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000020000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000100000000000000000000070000000000000000000000000000
.................................................................................................................CAGCAACAGCAGCAGCAG---CA.................................................................................................20200.60120000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000010000800000100000000000000000
.............................TTT---CAGCAGCAGCAGCAGC......................................................................................................................................................................................1950.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................CAGCA-----G---CA-GC---AGCA-TG-------------AG1880.3830000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
.............................................................................................AGCTGC------------AACAGCAACAGCAGCAGCA.......................................................................................................2530.3310000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................AGCAGCAGCAGCAGCA---A---CAGC------....................................................................................................................................................................21200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................AGCAGCAGCA---A---CAGC------AGCAAC..............................................................................................................................................................21200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.................................................GCA---A---CAGC------AGCAACA---GC---AGCA---..............................................................................................................................................21200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................AGCAGCA---A---CAGC------AGCAACA---..........................................................................................................................................................19200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................C------------AACAGCAACAGCAGCAGCAG---C..................................................................................................22200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................GCAGCAGCAGCA---A---CAGC------AGC.................................................................................................................................................................20200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000
..................AGCA---GCAGTTT---CAGCAGG...............................................................................................................................................................................................1860.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
..............................TT---CAGCAGCAGCAGCAGCA---..................................................................................................................................................................................19200.1530000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................AGCAACA---GC---AGCA---GCAGC.........................................................................................................................................18200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................CA---A---CAGC------AGCAACA---GC---AGCA---GCAGC.........................................................................................................................................25200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
................................................AGCA---A---CAGC------AGCAACA---GC---AGCA---..............................................................................................................................................22200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
....................................................................................AGCA---GCAGCTGC------------AACAGCA...................................................................................................................1980.1310000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................GCAGCA-----G---CA-GC---AGCA-TG-------------AG1980.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................TGC------------AACAGCAACAGCAGCAGC........................................................................................................21170.1220000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...........................................................CAGC------AGCAACA---GC---AGCA---GCAGC.........................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................CAGC------AGCAACA---GC---AGCA---GC............................................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000100000000000000000000000000000000000000000
.......................................AGCAGCAGCAGCA---A---CAGC------A...................................................................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000010000
...............................................CAGCA---A---CAGC------AGCAACA---GC---AGCA---GC............................................................................................................................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................ACAGCAACAGCAGCAGCAG---CA.................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................ACAGCAACAGCAGCAGCA.......................................................................................................18200.1020000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................C------------AACAGCAACAGCAGCAGCAG---CAACA------........................................................................................26200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................GC------------AACAGCAACAGCAGCAGCAG---C..................................................................................................23200.1020000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................T---CAGCAGCAGCAGCAGCA---A---CAGC------A...................................................................................................................................................................24130.0810000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................AGCAGCAGCA---A---CAGC------AGCAACA---GC---.....................................................................................................................................................24170.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................CTGC------------AACAGCAACAGCAGCA..........................................................................................................20170.0610000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................GCAGCAGCA---A---CAGC------AGCAACA---GC---AGC..................................................................................................................................................26180.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................ACAGCAACAGCAGCAGCAG---C..................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................AGCAGCAGCAGCA---A---CAGC------AGCAAC..............................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................CAGCA---A---CAGC------AGCAACA---GC---AGC..................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................AGCAGCAGCA---A---CAGC------AGCAACA---..........................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................GCAGCAGCAGCA---A---CAGC------AGCA................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................T---CAGCAGCAGCAGCAGCA---A---CA............................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................ACAGCAACAGCAGCAGCAG---CAA................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................CAGCA---A---CAGC------AGCAACA---GC---AGCA---GCA...........................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................T---CAGCAGCAGCAGCAGCA---..................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................AGCA---A---CAGC------AGCAACA---GC---AGCA---GC............................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................A---A---CAGC------AGCAACA---GC---AGCA---GC............................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..........................................AGCAGCAGCA---A---CAGC------AGCAACA---G.........................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................AGCAGCA---A---CAGC------AGCAACA---GC---AGCA---..............................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................AGCAGCAGCAGCAGCA---A---CAG...........................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................C------AGCAACA---GC---AGCA---GCAGC.........................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................AGCAGCAGCAGCA---A---CAGC------AGC.................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
................................................AGCA---A---CAGC------AGCAACA---GC---A....................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................C------------AACAGCAACAGCAGCAGCAG---...................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................AGCAACAGCAGCAGCAG---CAAC...............................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................CAGCAGCA---A---CAGC------AGCAACA---..........................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.............................................AGCAGCA---A---CAGC------AGCAACA---GC---A....................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................T---CAGCAGCAGCAGCAGCA---A---C.............................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................GCA---A---CAGC------AGCAACA---GC---AGCA---GC............................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................AGCAGCAGCAG---CAACA------TC......................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................AACAGCAACAGCAGCAGCA.......................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
...........................................GCAGCAGCA---A---CAGC------AGCAACA---GC---A....................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................CAGCAGCAGCAG---CAACA------TC......................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................CAGCAGCAGCAGCAGCA---A---CAGC------....................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................CAGC------AGCAACA---GC---AGCA---GCAG..........................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................CAGCA---A---CAGC------AGCAACA---GC---AGCA---..............................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................CAGCA---A---CAGC------AGCAACA---GC---AG...................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................CAGCAGCA---A---CAGC------AGCAACA---GC---AGC..................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...................................CAGCAGCAGCAGCAGCA---A---CA............................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................CCCAGCAGCA-----G---CA-GC---AGCA-.................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................CAGCA---A---CAGC------AGCAACA---GC---AGCA---G.............................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................AGCAGCAGCA---A---CAGC------AGCA................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................GCAACAGCAGCAGCAG---CAAC...............................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
droSim2
AACATCAGCAGCAGCATCAGCA---GCAGCAT---CAGCAGCAGCATCAGC---------AGTCGC---ATCAGCA---G---CCGCA---TCAGCAGTCGC------------------AGCAGCAGCAA---CAACA------GCC------G---GCAA-TTATAAATTCAACAA--------------CG----AC-GACGGCC---A---------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............................................ATCAGC---------AGTCGC---ATCA................................................................................................................................................................1611.00100000000100000000
.......................................................................................A---TCAGCAGTCGC------------------AGCAGC...........................................................................................................1840.75300300000000000000
....................................AGCAGCAGCATCAGC---------AGTCGC---ATC.................................................................................................................................................................2420.50100000000001000000
.......................................AGCAGCATCAGC---------AGTCGC---ATC.................................................................................................................................................................2120.50100100000000000000
......................................CAGCAGCATCAGC---------AGTCGC---ATC.................................................................................................................................................................2220.50100100000000000000
....................................AGCAGCAGCATCAGC---------AGTC.........................................................................................................................................................................1960.17100000000001000000
.....................A---GCAGCAT---CAGCAGCAGC............................................................................................................................................................................................18200.05100000000001000000
.........AGCAGCATCAGCA---GCAGC...........................................................................................................................................................................................................18200.05100000000001000000
droSec2
ATCAAGTGCAGCAGCAGCAGCA---GCAGCAT---CAGCACCAGCATCAGCA---A---CAGC------ATCAACAGCAGCAACATCA---TCACCAGCATC------------------AGCAACAGCAG---CAACA------CCAGATGCAG----CAC-CATCAGATCCATCAT--------------CA----GACGGCGCCC---A-----G-------------GASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
AACAACAGCAACCGCATCAGCA---GCAACAA---CAGCAGCAGCAACAACA---A---CAGC------AGCAGCA---A------CAACAACAGCAGCAGC------------------AACAACAGCAG---CAACA------ACA------A-ATGCA--GCAGCAA----------------------CAAATAAA---C--GC---AGTG-CA-------------AASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................CAACAACA---A---CAGC------AGCAGCA---..........................................................................................................................................................20200.10200000020000
..........................................................................CA---A------CAACAACAGCAGCAGC------------------A................................................................................................................20200.10200000020000
.................................................ACA---A---CAGC------AGCAGCA---A------CAACAACAG..........................................................................................................................................25130.08101000000000
............................ACAA---CAGCAGCAGCAACAACA---A---CAGC------....................................................................................................................................................................26130.08100100000000
...........................AACAA---CAGCAGCAGCAACAACA---A---CAG...........................................................................................................................................................................26130.08101000000000
................................................AACA---A---CAGC------AGCAGCA---A------CAACAACAG..........................................................................................................................................26130.08101000000000
.................................................ACA---A---CAGC------AGCAGCA---A------CAACAACAGC.........................................................................................................................................26130.08100100000000
............................ACAA---CAGCAGCAGCAACAACA---A---CAG...........................................................................................................................................................................25130.08101000000000
....................................................................................................GC------------------AACAACAGCAG---CAACA------ACA------A-.............................................................................22140.07101000000000
............................................................AGC------AGCAGCA---A------CAACAACAGCA........................................................................................................................................22200.05101000000000
..........................................................................CA---A------CAACAACAGCAGCAGC------------------.................................................................................................................19200.05101000000000
.............................................AACAACA---A---CAGC------AGCAGCA---A------CAACA..............................................................................................................................................25200.05101000000000
..........................................AGCAACAACA---A---CAGC------AGCA................................................................................................................................................................19200.05100000010000
...................GCA---GCAACAA---CAGCAGCAGCAACA........................................................................................................................................................................................24200.05101000000000
.............................................AACAACA---A---CAGC------AGCAGCA---..........................................................................................................................................................19200.05100000100000
......................................................................................CAACAACAGCAGCAGC------------------AAC..............................................................................................................19200.05100100000000
.........................................................................GCA---A------CAACAACAGCAGCAGC------------------.................................................................................................................20200.05101000000000
........................................GCAGCAACAACA---A---CAGC------AGCAGCA---A------C..................................................................................................................................................26200.05100010000000
....................................AGCAGCAGCAACAACA---A---CAGC------A...................................................................................................................................................................22200.05101000000000
....................CA---GCAACAA---CAGCAGCAGCA...........................................................................................................................................................................................20200.05100000010000
......................................................................................CAACAACAGCAGCAGC------------------AACA.............................................................................................................20200.05100000010000
............................................CAACAACA---A---CAGC------AGCAGC..............................................................................................................................................................19200.05101000000000
...........................................................................A---A------CAACAACAGCAGCAGC------------------AACAACA..........................................................................................................25200.05101000000000
...................GCA---GCAACAA---CAGCAGCAGCAAC.........................................................................................................................................................................................23200.05101000000000
...........................................GCAACAACA---A---CAGC------AGCAGC..............................................................................................................................................................20200.05101000000000
...........................................................................A---A------CAACAACAGCAGCAGC------------------A................................................................................................................19200.05100000100000
..................................................CA---A---CAGC------AGCAGCA---A------CAACAACAGCA........................................................................................................................................26200.05101000000000
............................................................AGC------AGCAGCA---A------CAACAACAGCAGCAGC------------------.................................................................................................................27200.05101000000000
...................................................A---A---CAGC------AGCAGCA---A------CAACAACAGCA........................................................................................................................................25200.05101000000000
......................................................................GCAGCA---A------CAACAACAGCAGCAGC------------------AAC..............................................................................................................26200.05100010000000
.................CAGCA---GCAACAA---CAGCAGCA..............................................................................................................................................................................................20200.05101000000000
.............................................................................................AGCAGCAGC------------------AACAACAGCAG---CAACA------........................................................................................25200.05100100000000
.............................CAA---CAGCAGCAGCAACAACA---A---CAGC------A...................................................................................................................................................................26200.05101000000000
.....................................................................AGCAGCA---A------CAACAACAGCAGC......................................................................................................................................21200.05100100000000
..............................AA---CAGCAGCAGCAACAACA---A---CAGC------A...................................................................................................................................................................25200.05101000000000
....................................AGCAGCAGCAACAACA---A---CAGC------AGCAGC..............................................................................................................................................................27200.05101000000000
.....................................GCAGCAGCAACAACA---A---CAGC------....................................................................................................................................................................20200.05101000000000
droEre2
TCCAGCAGCAACAGCAGCAACA---GCTGCAA---CAGCAGCAGCAGCAGCA---G---CAGC------AGCAGCA---GC---TGCA---ACAGCAGCAGC---------AG---C---AGCAGCAGCAA---CAACAGCA---G----------CAGCA--------------------------------------A---CAGGC---AGCT-CA-------------ATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........................................................................................................................................ACAGCA---G----------CAGCA--------------------------------------A---CAGGC---AGCT-.................2211.0010000010
...............................................................................................................................GCAA---CAACAGCA---G----------CAGCA--------------------------------------A---CAGGC---......................2420.5010100000
..............................................................C------AGCAGCA---GC---TGCA---ACAGCAGCA.....................................................................................................................................2330.3311000000
..............................................................C------AGCAGCA---GC---TGCA---ACAGCAG.......................................................................................................................................2140.2511000000
..................................................................................................................................A---CAACAGCA---G----------CAGCA--------------------------------------A---CAGG..........................2080.1311000000
...........................................GCAGCAGCA---G---CAGC------AGCAGCA---GC---TGC..................................................................................................................................................26200.0510100000
...............................................................................................................AG---C---AGCAGCAGCAA---CAACAGCA---G----------C............................................................................24200.0511000000
...................................................................................................AGC---------AG---C---AGCAGCAGCAA---CAACAGCA---G----------CA...........................................................................28200.0511000000

Generated: 06/08/2015 at 04:41 PM