ID:

dpe_1790

 Coordinate:

scaffold_5:6264748-6264898 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dper_GLEANR_8112:3]; CDS [Dper\GL25532-cds]; intron [Dper\GL25532-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AGACGAAAATAGAGCAGACTACGACGGAGGCTACTACGCCAGCAGCAGCGGCAGCAGCAATGTCTATGCCCATGCCTCTCTCTCCGTCGTCGTCTATTAATAGCAGTACGGAGAGAGCATCATCAGCATCGCCATCGCCACTGCCCTCGCCACTGGCATCGCCCAGCGGATCATCGGCAGCCTCATCGTCGTCCGCCGCCTCGTTCACTTGGCTGCGCAACAGTTTGCCCGACATACGCGAGCCGCGAGGT
******************************************************************************************............(((((..((.((..((............))..)).)))))))..........************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M021
embryo
 V111
male body		 M042
female body
 V057
head
....................................................................................................................................CATCGCCACTGCCCTCGCCACT................................................................................................. 22 0 1 5.00 5 5 0 0 0
......................................................................................................................ATCATCAGCATCGCCATCGCCACTGC........................................................................................................... 26 0 1 3.00 3 3 0 0 0
..........................................................................................................................................................GGCATCGCCCAGCGGATCATCGGC......................................................................... 24 0 1 3.00 3 3 0 0 0
...CGAAAATAGAGCAGACTACGAC.................................................................................................................................................................................................................................. 22 0 1 3.00 3 3 0 0 0
............................................................................................................................................................CATCGCCCAGCGGATCATCGGC......................................................................... 22 0 1 2.00 2 2 0 0 0
..........................................................................................CGTCTATTAATAGCAGTACGGA........................................................................................................................................... 22 0 1 2.00 2 2 0 0 0
........................................................................................................................CATCAGCATCGCCATCGCCACTGC........................................................................................................... 24 0 1 2.00 2 2 0 0 0
..................................................................................................................................................................................AGCCTCATCGTCGTCCGC....................................................... 18 0 1 2.00 2 2 0 0 0
.......AATAGAGCAGACTACGACGGA............................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0
...................................................................................................................................................................................GCCTCATCGTCGTCCGCC...................................................... 18 0 1 1.00 1 1 0 0 0
..........AGAGCAGACTACGACGGAGGCT........................................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0
............................................................................................................................................................CATCGCCCAGCGGATCATCGGCAGCCC.................................................................... 27 1 1 1.00 1 1 0 0 0
..............................................................................................TATTAATAGCAGTACGGAGA......................................................................................................................................... 20 0 1 1.00 1 0 0 1 0
...............................................................................................................................ATCGCCATCGCCACTGCCCTCGCCACT................................................................................................. 27 0 1 1.00 1 1 0 0 0
.......AATAGAGCAGACTACGACGGAGGCTA.......................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0
............................................................................................................................................................CATCGCCCAGCGGATCATCGGCAGCCT.................................................................... 27 0 1 1.00 1 1 0 0 0
.............................................................................................................................................................ATCGCCCAGCGGATCATCGGCAGCCT.................................................................... 26 0 1 1.00 1 1 0 0 0
......................................................................................................................ATCATCAGCATCGCCATCGCCACTGG........................................................................................................... 26 1 1 1.00 1 1 0 0 0
....................................................................................................................................................................AGCGGATCATCGGCAGCCT.................................................................... 19 0 1 1.00 1 1 0 0 0
........................................................................................................AGTACGGAGAGAGCATCATC............................................................................................................................... 20 0 1 1.00 1 0 0 1 0
..................................................................................................................................................................CCAGCGGATCATCGGCAGG...................................................................... 19 1 1 1.00 1 1 0 0 0
.............................................................................................CTATTAATAGCAGTACGGAGAGAGC..................................................................................................................................... 25 0 1 1.00 1 0 1 0 0
................................................................................................................................................................GCCCAGCGGATCATCGGC......................................................................... 18 0 1 1.00 1 1 0 0 0
................GACTACGACGGAGGCTACT........................................................................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0
.......................................................................................................................................................................................CATCGTCGTCCGCCGCCT.................................................. 18 0 1 1.00 1 1 0 0 0
.............................................................................................................................................................ATCGCCCAGCGGATCATCGGCAGCCC.................................................................... 26 1 1 1.00 1 1 0 0 0
...........................................................................................................................................................................................................TTCACTTGGCAGGGCTACAG............................ 20 3 8 0.13 1 0 0 0 1
.............GAAGACGACGACGGAGGCTGC......................................................................................................................................................................................................................... 21 3 20 0.05 1 0 1 0 0

Anti-sense strand reads

TCTGCTTTTATCTCGTCTGATGCTGCCTCCGATGATGCGGTCGTCGTCGCCGTCGTCGTTACAGATACGGGTACGGAGAGAGAGGCAGCAGCAGATAATTATCGTCATGCCTCTCTCGTAGTAGTCGTAGCGGTAGCGGTGACGGGAGCGGTGACCGTAGCGGGTCGCCTAGTAGCCGTCGGAGTAGCAGCAGGCGGCGGAGCAAGTGAACCGACGCGTTGTCAAACGGGCTGTATGCGCTCGGCGCTCCA
*************************************************************************************************............(((((..((.((..((............))..)).)))))))..........****************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V057
head
.......................................................................................................................................................................................................GAGCAAGTGTACCGACACGAT............................... 21 3 1 1.00 1 1
......................................................GTCGTTACGGATAAGGGAAC................................................................................................................................................................................. 20 3 9 0.11 1 1
...................................................................................................................................................GCGGTGACCGTAGGGGGG...................................................................................... 18 2 10 0.10 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_5:6264698-6264948 - dpe_1790 AGACGAAAATAGAGCAGACTACGACGGAGGCTA-CTAC---------------------------------------------------GCCA---------GCAGCAGCGGCAGCAGCAATG--------------------------------TCTATGCCCATGCCTC---------------TCT------------------CTCCGTCGTCGTCTATTAATAGCAGT------ACGGAGAGAG---CAT---CATCA------------G------------------------------------CATC------------GCCATCGCCACTGCCCTCGCCACTGGCATCGCCCAGCGGATCATCGGCAGCC---------------------------TCATCGTCGTCCGCCGCCTC----GTTCACTTGGCTGCG---CAACAGTTTGCCCGACATACGCGAGCCGCGAGGT
dp5 4_group5:1859365-1859624 - AGACGAAAATAGAGCAGACTACGACGGAGGCTA-CTAC---------------------------------------------------GCCAGCAGCAGCAGCAGCAGCGGCAGCAGCAATG--------------------------------TCTATGCCCATGCCTC---------------TCT------------------CTCCGTCGTCGTCTATTAATAGCAGT------ACGGAGAGAG---CAT---CATCA------------G------------------------------------CATC------------GCCATCGCCACTGCCCTCGCCACTGGCATCGCCCAGCGGATCATCGGCAGCC---------------------------TCATCGTCGTCCGCCGCCTC----GTTCACTTGGCTGCG---CAACAGTTTGCCCGACATACGCGAGCCGCGAGGT
droWil2 scf2_1100000004521:6902363-6902601 - AGACGAAAATAGAGAATAGC---------------------------------------------------------------------------------------AGCGGCAACAGCATCGCCACAACACCGACCAAGATGGCAACGGAGAAGTCT---TCCGTGCCCT---------------GCT------------------CTCCAACATCATCTATAAATAGCTCGACGACGTCGGAGAGAG---CAAATGGCTCT------------C----------------------------AG------CA-----------TTCACCATCA------------------CCATCTCCCAGTG---CT------GCC---------------------------TCATCATCGTCTGCCGCCTC----GTTCACTTGGCTAGG---CAACAGTTTGCCCGATATACGCGAACCGCGAGGT
droVir3 scaffold_12963:2596592-2596836 - AGACAAAAATAGAGCAGCAGACAAACGAGA---------------------------------------------------------------------------------------------CGCAGT------------------------------------CAGCGTCGCAGTCATCTCTCGGCT------------------CTCCGGCATCGTCTATAAATAGCTGC------GAGAGAGGCG---CAC---GCTCG------------C------------------------------------CATCCACGTC------GTCTTCG------------------CCATCGCCCAGCGGATCAGCGGCATCCGCAACGTCGTCGCCGACGTCGTTGTCGTCAACATCGTCCGCCGCCTC----GTTCACTTGGCTGCG---CAACAGTTTGCCCGACATACGCGAGCCGCGAGGT
droMoj3 scaffold_6500:12794448-12794665 - AGACAAAAATAGAGCAGCAGACAAACGAGA---------------------------------------------------------------------------------------------TACAGT------------------------------------CGGCATCCACATCATCTCTTGGCT------------------CTCCGACATTGTCTATAAATAGCAGC---------GAGAGAGACACAC---AC------------------------------------------------------------------------TCG------------------CCATCGCCCAGCGGATCAGCG---ACG------TCGTCGTCGTCGCCATCGTCTTCAACATCGTCCGCCGCCTC----GTTCACTTGGCTGCG---GAACAGTTTGCCCGATATACGCGAGCCGCGAGGT
droGri2 scaffold_15252:2210269-2210537 - AGACGAAAATAGTGCAGCAGACAAACGTGGACG-AGACGCAATCAACTGCCTCCGTCTCCGTCTCTGCCTCCGCCTCCGCCTCCGCCTCAGCATCAGCATCAACATCAGCGTCGTCAGCATCA--------------------------------TCGCTGC---TGCTTG---------------CCT------------------CTCCGACATCGTCTATAAATAGCTGC---------GAGAGCGGCGCA---------------------------------------------------------------------------------------------------GCATCGCCGAGCGATTCGGCG---ACG---------------------------TCAGCATCGTCGGTTGCCTC----TTTCACTTGGCTGCG---GAACAGTTTGCCCGATATACGCGAGCCGCGAGGT
droAna3 scaffold_12984:714032-714279 + AGCTGAAAATAGAGCAGCCGTCGGGCACCA---------------------------------------------------------------------------------------------ACAATA------------------------------------TGCCCT---------------GCT------------------CTCAGACGTTGGCTATTAATAGTTCC------CCGGAGAGGC---CAA---CCTCTTCGGCATCGTCTACATCGGGATCGATGCGTCCATCGGCCTCAGCGTCAGCCTCAGAATCACCTTCACAGCTT------------------CCATCGCCGAGCGGATCGGTG------------------------------------GCATCGTCCGCCGCCTC----GTTTACATGGCTGCA---TAACAGTTTGCCCGATATACGCGAGCCGCGAGGT
droBip1 scf7180000395865:13480-13721 + AGCTGAAAATAGAGCAGCCGTCGGGCACAA---------------------------------------------------------------------------------------------GCACAA------------------------------------TGCCCT---------------GCT------------------CTCAGACGTTGGCTATTAATAGTTCC------CCGGAGAGTC---CCA---CCTCTTCGGCATCGTCTGAATCGGAATCGATGAGTCCATCGGCCTCA------GACTCAGCATCACCTTCACAACTT------------------CCATCGCCGAGCGGATCAGAG------------------------------------GCATCGTCGGCCGCCTC----GTTTACATGGCTGCA---CAACAGTTTGCCCGATATACGCGAGCCGCGAGGT
droKik1 scf7180000302808:7380-7594 + AGCCAAAAATAGAGCAGACAACGGACACGG---------------------------------------------------------------------------------------------CTGCTA------------------------------------TGCCCT---------------GCTCTCCGT------------CTTCTCCATCGTCTATAAATAGTTCT------TCAGAGAGGA---CCG---GCTCT------------C------------------------------------AGCCAGAATCGGTGGCACCGTCG------------------CCGTCTCCGAGCGGATCTGTAGCCTCC---------------------------TCTTCGTCATCCACCGCATC----GTTTACGTGGCTGCG---CAATAGTTTGCCCGATATACGCGAGCCGCGAGGT
droFic1 scf7180000453158:51853-52058 - AGCCGAAAATAGAGCAGACTGCGGAGACGC---------------------------------------------------------------------------------------------TCGCAA------------------------------------CGCCCT---------------GCT------------------CTCCGTCGCCGTCTATTAATAGTTCG------CCGGAGAGGG---TCG---ACTCT------------C------------------------------------AGTTGGAATCGGCCACTCCGCTG------------------GCATCTCCGACCGAATCGAAC---GCC---------------------------TCGACATCGTCCGCCGCCTC----GTTCACTTGGCTGCG---CAACAGTTTGCCAGACATCCGCGACTCGCGCGGT
droEle1 scf7180000490616:5042-5256 - TGCCCAAAATAGAGCAGACTACGGACACCG---------------------------------------------------------------------------------------------CCGCAA------------------------------------CGCCAT---------------GCTCTCCGTGCT---------CTCCTTCGTTGTCTATTTATAGTTTT------CCTGAGAGGG---CCG---GCTCT------------C------------------------------------AGACCGAAATGTCTTCGCCTCTT------------------CCGTCCCCGACCGGATCGACC---ACA---------------------------TCAACGTCGTCTCTCGCCTC----GTTTACTTGGCTACG---TAACAGTTTGCCCGACATCCGCGAGCCGCGAGGT
droRho1 scf7180000780111:3687-3910 + ACCCGAAAATAGAACAGACTGCCAATATCG---------------------------------------------------------------------------------------------CATTAA------------------------------------CGCCCT---------------GCTCTCCGTGCTCTCCGTCCTCTCCGCCGTTGTCTATTAATAGTTTC------CCTGAGAGGG---CAT---GCTCT------------C------------------------------------AGTCTAAATTGGATTTGCCGCTC------------------ACGTCGCCAACCGGATCGGCC---GTA---------------------------TCAACGTCGTCCGCTGCCTC----GTTCACTTGGCTGCG---CAACAGTTTGCCCGACATCCGCGAGCCGCGAGGT
droBia1 scf7180000301483:5833-6035 + AGCCCAAAATAGAGCAAGCCATGAACACGGTCACACACACAGTCAA------------------------------------------------------------------------------------------------------------------------------ACACACAACTATTTGCT------------------CTTCATCGACGTCTATTAATAGTTCA------CCTGAAGGGG---CCG---GGTAT------------C------------------------------------AATCGGATTCTGCTTGGTCGCTG------------------TCA---------------------------------------------------TCGACGTCGTCTTCCACCAT----GTTCACTTGGCTTCA---CAACAGTTTGCCCGACATTCGCGAGTCGCAAGGT
droTak1 scf7180000414595:4539-4738 - AGCCCAAAATAGAGCAGACTATAAGCACGG---------------------------------------------------------------------------------------------TCGCAA------------------------------------CGCCCT---------------GCT------------------CTCC---GTCGACTATTAATAGTTCC------CCGGAGAGGG---CCT---GCTCT------------C------------------------------------AATCGGAATCTACTTCGCCGCTG------------------CCATCGCCGTCCGGATCG------ACA---------------------------TTGACGTCGTCCGCCGCCTC----ATTCACTTGGCTGAG---CAACAGTTTGCCCGACATCCGCGAGTCGCGAGGT
droEug1 scf7180000407335:42987-43177 + AGCCAAAAATAGACAAAACGGTGGACACAC---------------------------------------------------------------------------------------------CCGTAG------------------------------------CGCCCA---------------GCTCTC---------------ATTCTCCGTCGTCTATTAATAGTTAC------CAGGAGAGGG---CAA---GCTCT------------C------------------------------------AGT---------------CGCTG------------------CCATCGCCTACTGAATCG------GCA---------------------------TCGACGTCGTTCACAGTCTC----TTTAATTGAACTGCT---CAACAGTTTGCCGGGTACCGGCGAGACGTATGGT
dm3 chr2L:22142758-22142957 + AGACCGAAATAGAGCAGACTGCGGATACGG---------------------------------------------------------------------------------------------CTGCAT------------------------------------TAGCAT---------------GCT------------------CTCC---GTCGTCTATAAATAGTTCC------CCGGAGAGGG---CCA---GCTCC------------G------------------------------------AATCGGAATCGGCATCGCCGCTG------------------CCATCGCCGACCGGATCG------GCA---------------------------TCAACGTCGTCTGCCGCCTC----GTTCACTTGGCTACA---CAACAGTTTGCCAGATATCCGCGAGCCACGAGGT
droSim2 2l:21406633-21406820 + AGACCGAAATAGAGCAGACTGCGGATACGG---------------------------------------------------------------------------------------------CTGCAT------------------------------------TAGCAT---------------GCT------------------CTCC---GTCGTCTATAAATAGTTCC------CCGGAGAGGG---CCA---GCTCT------------G------------------------------------AATCGGAATCGGCATCGCCGCTG------------------CCATCGCCGACCGGATCG------GCA---------------------------TCAACG---CT-------TCAAGTTTTCCTTTCGCTGCGATTCCACAACTAGCCACAGA-----GAGTC----GGT
droSec2 scaffold_28:750182-750382 + AGACCGAAATAGAGCAGACTGCGGATACGG---------------------------------------------------------------------------------------------CTGCAT------------------------------------TAGCAT---------------GCT------------------CTCC---GTCTTCTATAAATAGTTCC------CCGGAGAGGG-C-CCA---GCTCT------------G------------------------------------AATCGGAATCGGCATCGCCGCTG------------------CCATCGCCGACCGGATCG------GCA---------------------------TCAACGTCGTCTGCCGCCTC----GTTCACTTGGCTACA---CAACAGTTTGCCAGATATCCGCGAGCCACGAGGT
droYak3 2R:481742-481926 - AGACCGAAATAGAACAGACTGTGGACGCGA---------------------------------------------------------------------------------------------CTGCAT------------------------------------TAGCAT---------------GCT------------------CTCC---GTCGTCTATAAATAGTTCC------CCGGAGAGGG---CCA---GCTCC------------G------------------------------------AAT------------CGCCGTTG------------------CCGTCTCCGACCGGATCG------GCA---------------------------TCAACGTCGTCT---GCCTC----GTTCACTTGGCTGCA---CAACAGTTTGCCCGATATCCGCGAGCCACGAAGT
droEre2 scaffold_4845:2274053-2274243 - AGACCGAAATAGAGCAGACTGCGGACACGG---------------------------------------------------------------------------------------------CTGCAT------------------------------------TAGCAT---------------GCT------------------CTCC---GTCGTCTATAAATAGTTCC------CCGGAGAGGG---CCA---GTTCC------------G------------------------------------AATCGGAA------TCGCCGCTG------------------CCATCGCCGACCGGATCG------GCA---------------------------TCAACGTCGTCT---GCTTC----GTTCACTTGGCTGCA---CAACAGTTTGCCAGATATCCGCGAGCCACGAGGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
AGACGAAAATAGAGCAGACTACGACGGAGGCTA-CTAC---------------------------------------------------GCCA---------GCAGCAGCGGCAGCAGCAATG--------------------------------TCTATGCCCATGCCTC---------------TCT------------------CTCCGTCGTCGTCTATTAATAGCAGT------ACGGAGAGAG---CAT---CATCA------------G------------------------------------CATC------------GCCATCGCCACTGCCCTCGCCACTGGCATCGCCCAGCGGATCATCGGCAGCC---------------------------TCATCGTCGTCCGCCGCCTC----GTTCACTTGGCTGCG---CAACAGTTTGCCCGACATACGCGAGCCGCGAGGTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................................................................................................................................................................................................................................................................................................................................CATCGCCACTGCCCTCGCCACT...................................................................................................................................2215.005500000
.............................................................................................................................................................................................................................................................AT---CATCA------------G------------------------------------CATC------------GCCATCGCCACTGC.............................................................................................................................................2613.003300000
................................................................................................................................................................................................................................................................................................................................................................GGCATCGCCCAGCGGATCATCGGC...........................................................................................................2413.003300000
...CGAAAATAGAGCAGACTACGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.003300000
..................................................................................................................................................................................................................................................................................................................................................................CATCGCCCAGCGGATCATCGGC...........................................................................................................2212.002200000
........................................................................................................................................................................................................................CGTCTATTAATAGCAGT------ACGGA...............................................................................................................................................................................................................................................2212.002200000
..................................................................................................................................................................................................................................................................CATCA------------G------------------------------------CATC------------GCCATCGCCACTGC.............................................................................................................................................2412.002200000
........................................................................................................................................................................................................................................................................................................................................................................................AGCC---------------------------TCATCGTCGTCCGC..............................................................1812.002200000
.......AATAGAGCAGACTACGACGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.........................................................................................................................................................................................................................................................................................................................................................................................GCC---------------------------TCATCGTCGTCCGCC.............................................................1811.001100000
..........AGAGCAGACTACGACGGAGGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
..................................................................................................................................................................................................................................................................................................................................................................CATCGCCCAGCGGATCATCGGCAGCC---------------------------C...........................................................................2711.001100000
............................................................................................................................................................................................................................TATTAATAGCAGT------ACGGAGA.............................................................................................................................................................................................................................................2011.001010000
.........................................................................................................................................................................................................................................................................................................................ATC------------GCCATCGCCACTGCCCTCGCCACT...................................................................................................................................2711.001100000
.......AATAGAGCAGACTACGACGGAGGCTA-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
..................................................................................................................................................................................................................................................................................................................................................................CATCGCCCAGCGGATCATCGGCAGCC---------------------------T...........................................................................2711.001100000
...................................................................................................................................................................................................................................................................................................................................................................ATCGCCCAGCGGATCATCGGCAGCC---------------------------T...........................................................................2611.001100000
.............................................................................................................................................................................................................................................................AT---CATCA------------G------------------------------------CATC------------GCCATCGCCACTGG.............................................................................................................................................2611.001100000
..........................................................................................................................................................................................................................................................................................................................................................................AGCGGATCATCGGCAGCC---------------------------T...........................................................................1911.001100000
......................................................................................................................................................................................................................................AGT------ACGGAGAGAG---CAT---CATC.............................................................................................................................................................................................................................2011.001010000
........................................................................................................................................................................................................................................................................................................................................................................CCAGCGGATCATCGGCAGG........................................................................................................1911.001100000
...........................................................................................................................................................................................................................CTATTAATAGCAGT------ACGGAGAGAG---C......................................................................................................................................................................................................................................2511.001000001
......................................................................................................................................................................................................................................................................................................................................................................GCCCAGCGGATCATCGGC...........................................................................................................1811.001100000
................GACTACGACGGAGGCTA-CT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................CATCGTCGTCCGCCGCCT.........................................................1811.001100000
...................................................................................................................................................................................................................................................................................................................................................................ATCGCCCAGCGGATCATCGGCAGCC---------------------------C...........................................................................2611.001100000
dp5
AGACGAAAATAGAGCAGACTACGACGGAGGCTA-CTAC---------------------------------------------------GCCAGCAGCAGCAGCAGCAGCGGCAGCAGCAATG--------------------------------TCTATGCCCATGCCTC---------------TCT------------------CTCCGTCGTCGTCTATTAATAGCAGT------ACGGAGAGAG---CAT---CATCA------------G------------------------------------CATC------------GCCATCGCCACTGCCCTCGCCACTGGCATCGCCCAGCGGATCATCGGCAGCC---------------------------TCATCGTCGTCCGCCGCCTC----GTTCACTTGGCTGCG---CAACAGTTTGCCCGACATACGCGAGCCGCGAGGTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................................................................................................................................................................................................................................................................................................ATCGCCACTGCCCTCGCCACT...................................................................................................................................2114.0040400000000
................................................................................................................................................................GCCCATGCCTC---------------TCT------------------CTCCGT..............................................................................................................................................................................................................................................................................2014.0040400000000
.............................................................................................................................................................................................................................ATTAATAGCAGT------ACGGAGAGAG---C......................................................................................................................................................................................................................................2312.0020110000000
...........................................................................................................................................................................................................................CTATTAATAGCAGT------ACGGAGAGAG---C......................................................................................................................................................................................................................................2512.0020110000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................ATCGTCGTCCGCCGCCTC----GT..................................................2012.0020100001000
..................................................................................................................................................................................................................................................................................................................................................................CATCGCCCAGCGGATCATCGGC...........................................................................................................2212.0020100100000
.GACGAAAATAGAGCAGACTACGACGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020200000000
................................................................................................................................................................................................................................................................................................................................................................GGCATCGCCCAGCGGATCATC..............................................................................................................2112.0020101000000
.....................................................................................................................................................................................................................CGTCGTCTATTAATAGCAGT------ACGGAGAG............................................................................................................................................................................................................................................2812.0020010100000
.....................................................................................................................................................................................................................CGTCGTCTATTAATAGCAGT------ACGGA...............................................................................................................................................................................................................................................2512.0020200000000
..........................................................................................................................................................................................................................................................................................................................................CATCGCCACTGCCCTCGCCACT...................................................................................................................................2212.0020200000000
...............................TA-CTAC---------------------------------------------------GCCAGCAGCAGCAGCAGC........................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
............................................................................................................................................................................................................................TATTAATAGCAGT------ACGGAG..............................................................................................................................................................................................................................................1911.0010100000000
......AAATAGAGCAGACTACGACGGAGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................CCAGCGGATCATCGGCAGCC---------------------------T...........................................................................2111.0010000010000
...............................................................................................................................................................................................................................................ACGGAGAGAG---CAT---CATCA------------G------------------------------------CATC------------...........................................................................................................................................................2311.0010100000000
..........................................................................................................................................................................................................................TCTATTAATAGCAGT------ACGGA...............................................................................................................................................................................................................................................2011.0010100000000
.............................................................................................................................................................................................................................................................AT---CATCA------------G------------------------------------CATC------------GCCATCGCCACTGC.............................................................................................................................................2611.0010100000000
....GAAAATAGAGCAGACTACGACGGAGGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010010000000
..........................................................................................................................................................................................................................................................................................................................................................................AGCGGATCATCGGCAGCC---------------------------TCATCGT.....................................................................2511.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................GATCATCGGCAGCC---------------------------TCATCGT.....................................................................2111.0010000001000
.....................................................................................................................................................................................................................................................................................................................................................................CGCCCAGCGGATCATCGGCAGC........................................................................................................2211.0010100000000
................................................................................................................................................................................................................................................................................................................................................................GGCATCGCCCAGCGGATCATCGGC...........................................................................................................2411.0010100000000
............................................................................................................................................................................................................................TATTAATAGCAGT------ACGGAGA.............................................................................................................................................................................................................................................2011.0010100000000
.............GCAGACTACGACGGAGGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
AGACGAAAATAGAGCAGACTACGACG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
....GAAAATAGAGCAGACTACGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
................................A-CTAC---------------------------------------------------GCCAGCAGCAGCAGC...........................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100000
...............AGACTACGACGGAGGCTA-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................ATCATCGGCAGCC---------------------------TCATCGTCG...................................................................2211.0010100000000
................................................................................................................................................................................................................................................................................................................................................................GGCATCGCCCAGCGGATCATCGGCAGC........................................................................................................2711.0010100000000
......................................................................................................................................................................................................................GTCGTCTATTAATAGCAGT------ACGGAGA.............................................................................................................................................................................................................................................2611.0010100000000
............AGCAGACTACGACGGAGGCTA-C................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100000
............................................................................................................................................................................................................................TATTAATAGCAGT------ACGGAGAGAG---C......................................................................................................................................................................................................................................2411.0010000001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................CGTCCGCCGCCTC----GTTCACTTGGCTGC......................................2711.0010000010000
................................................................................................................................................................................................................................AATAGCAGT------ACGGAGAGAG---C......................................................................................................................................................................................................................................2011.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................ATCATCGGCAGCC---------------------------TCATCGTC....................................................................2111.0010100000000
.......................................................................................................................AATG--------------------------------TCTATGCCCATGCCTC---------------TCT------------------....................................................................................................................................................................................................................................................................................2311.0010100000000
.....................................................................................................................................................................................................................CGTCGTCTATTAATAGCAGT------ACGG................................................................................................................................................................................................................................................2411.0010000100000
....................................................................................................................................................................ATGCCTC---------------TCT------------------CTCCGTCGTC..........................................................................................................................................................................................................................................................................2011.0010100000000
.....................................................................................................................................................................................................................CGTCGTCTATTAATAGCAGT------ACGGAGA.............................................................................................................................................................................................................................................2711.0010000100000
......................................................................................................................................................................................................................................AGT------ACGGAGAGAG---CAT---CA...............................................................................................................................................................................................................................1811.0010100000000
....GAAAATAGAGCAGACTACGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.......................................................................................................................AATG--------------------------------TCTATGCCCATGCCTC---------------TCT------------------CTCCGT..............................................................................................................................................................................................................................................................................2911.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................TGGCATCGCCCAGCGGATCATCGGCA..........................................................................................................2611.0010100000000
.............................................................................................................................................................................................................................................................AT---CATCA------------G------------------------------------CATC------------GCCATCGCCACT...............................................................................................................................................2411.0010010000000
.....................................................................................................AGCAGCAGCGGCAGCAGCAATG--------------------------------TCT.....................................................................................................................................................................................................................................................................................................................................2511.0010100000000
..................CTACGACGGAGGCTA-CTAC---------------------------------------------------GCCAGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
.GACGAAAATAGAGCAGACTACGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGTTTGCCCGACATACGCGAGC........2411.0010100000000
........ATAGAGCAGACTACGACGGAGGCTA-C................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010000000
..................CTACGACGGAGGCTA-CTAC---------------------------------------------------GCCAGC....................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
...................................................................................................GCAGCAGCAGCGGCAGCAGCAATG--------------------------------........................................................................................................................................................................................................................................................................................................................................2420.5010010000000
.........................................................................................GCCAGCAGCAGCAGCAGCAG......................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
droWil2
AGACGAAAATAGAGAATAGC---------------------------------------------------------------------------------------AGCGGCAACAGCATCGCCACAACACCGACCAAGATGGCAACGGAGAAGTCT---TCCGTGCCCT---------------GCT------------------CTCCAACATCATCTATAAATAGCTCGACGACGTCGGAGAGAG---CAAATGGCTCT------------C----------------------------AG------CA-----------TTCACCATCA------------------CCATCTCCCAGTG---CT------GCC---------------------------TCATCATCGTCTGCCGCCTC----GTTCACTTGGCTAGG---CAACAGTTTGCCCGATATACGCGAACCGCGAGGTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................................................................................................................................ACGACGTCGGAGAGAG---CAAATGGCT..............................................................................................................................................................................................................................2513.00330000
.................................................................................................................................................................................................................................ATAGCTCGACGACGTCGGAGAGA...........................................................................................................................................................................................................................................2312.00201100
.........................................................................................................................................AAGATGGCAACGGAGAAGTC......................................................................................................................................................................................................................................................................................................................................2012.00200101
.............................................................................................................................................................................................................................................................................................................................................................................G---CT------GCC---------------------------TCATCATCGTCTGCCGCC..........................................................2411.00110000
........................................................................................................................................................................................................................................................................................................................................................................................................................................CTC----GTTCACTTGGCTAGG---C.................................1911.00101000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATACGCGAACCGCGAGG.1811.00101000
......................................................................................................................................................................................................................ATCATCTATAAATAGCTCGAC........................................................................................................................................................................................................................................................2111.00101000
.............GAATAGC---------------------------------------------------------------------------------------AGCGGCAACAGCATCGCCAC....................................................................................................................................................................................................................................................................................................................................................................2711.00101000
.........................................................................................................................................AAGATGGCAACGGAGAAGT.......................................................................................................................................................................................................................................................................................................................................1911.00100100
...CGAAAATAGAGAATAGC---------------------------------------------------------------------------------------AGCGGC..................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
...............................................................................................................................................................................................................................AAATAGCTCGACGACGTCGGAGAGA...........................................................................................................................................................................................................................................2511.00100010
.....................................................................................................................................................GAGAAGTCT---TCCGTGCCCT---------------GCT------------------....................................................................................................................................................................................................................................................................................2211.00100010
.............................................................................................................................................................................................................................................................AAATGGCTCT------------C----------------------------AG------CA-----------TTCACC........................................................................................................................................................2111.00101000
.......................................................................................................................................................................................................................................CGACGACGTCGGAGAGAG---C......................................................................................................................................................................................................................................1911.00101000
.GACGAAAATAGAGAATAGC---------------------------------------------------------------------------------------AGCGGC..................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
...........GAGAATAGC---------------------------------------------------------------------------------------AGCGGCAACAGCATCGC.......................................................................................................................................................................................................................................................................................................................................................................2611.00100100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATACGCGAACCGCGAGGT2111.00100100
.......................................................................................................................................CCAAGATGGCAACGGAGAAGTCT---TCC...............................................................................................................................................................................................................................................................................................................................2611.00100100
.............GAATAGC---------------------------------------------------------------------------------------AGCGGCAACAGCATCGC.......................................................................................................................................................................................................................................................................................................................................................................2411.00100100
....................................................................................................................................................................................................................................GCTCGACGACGTCGGAGAGA...........................................................................................................................................................................................................................................2011.00110000
...........................................................................................................................................................................................................................................................................................................................................................................GTG---CT------GCC---------------------------TCATCATCGTCTGCC.............................................................2311.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCCGCCTC----GTTCACTTGGCTAG......................................2511.00110000
........................................................................................................................................CAAGATGGCAACGGAGAAGT.......................................................................................................................................................................................................................................................................................................................................2011.00100001
...............................................................................................................................................................................................................................AAATAGCTCGACGACGTCGGAGA.............................................................................................................................................................................................................................................2311.00100100
.................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCGCCTC----GTTCACTTGGCT........................................2211.00101000
.........................................................................................................................................................................................................................................................................................................................................................................................GCC---------------------------TCATCATCGTCTGCCGCC..........................................................2111.00110000
.............................................................................................................................................................................................................................................................................................................................................................................G---CT------GCC---------------------------TCATCATCGTCTGCC.............................................................2111.00110000
.................................................................................................................AACAGCATCGCCACAACACCGAC...........................................................................................................................................................................................................................................................................................................................................................2311.00100010
.........................................................................................................................................................................................................................ATCTATAAATAGCTCGACGACGTCGGAGA.............................................................................................................................................................................................................................................2911.00100100
.........................................................................................................................................................................................................................ATCTATAAATAGCTCGACGACGTCGGA...............................................................................................................................................................................................................................................2711.00100100
.....................................................................................................................GCATCGCCACAACACCGACCAAGAT.....................................................................................................................................................................................................................................................................................................................................................2511.00101000
.............................................................................................................................................................................................................................ATAAATAGCTCGACGACGTCGGAGAG............................................................................................................................................................................................................................................2611.00100100
......................................................................................................................................................................................................................................................................................................................................TCACCATCA------------------CCATCTCCCAGTG---CT------GCC---------------------------T...........................................................................2811.00101000
......................................................................................................................................................................................................................................TCGACGACGTCGGAGAGAG---C......................................................................................................................................................................................................................................2011.00110000
........................................................................................................................................................................................................................CATCTATAAATAGCTCGACGAC.....................................................................................................................................................................................................................................................2211.00110000
droVir3
AGACAAAAATAGAGCAGCAGACAAACGAGA---------------------------------------------------------------------------------------------CGCAGT------------------------------------CAGCGTCGCAGTCATCTCTCGGCT------------------CTCCGGCATCGTCTATAAATAGCTGC------GAGAGAGGCG---CAC---GCTCG------------C------------------------------------CATCCACGTC------GTCTTCG------------------CCATCGCCCAGCGGATCAGCGGCATCCGCAACGTCGTCGCCGACGTCGTTGTCGTCAACATCGTCCGCCGCCTC----GTTCACTTGGCTGCG---CAACAGTTTGCCCGACATACGCGAGCCGCGAGGTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................CATCGCCCAGCGGATCAGCGGC...........................................................................................................2212.002101000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................AAATAGCTGC------GAGAGAGGC...........................................................................................................................................................................................................................................1911.001000001000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................GCATCCGCAACGTCGTCGCCGAC......................................................................................2311.001100000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCGACATACGCGAGC........1811.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................GTC------GTCTTCG------------------CCATCGCCCAGCG.....................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................GGATCAGCGGCATCCGCAACGTC...............................................................................................2311.001000000000000000000001000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................CATCGTCTATAAATAGCTGC------GAGAGAGGC...........................................................................................................................................................................................................................................2911.001000000000000000000000000000000000000000000000000000000000000010
...CAAAAATAGAGCAGCAGACAAACGAGA---------------------------------------------------------------------------------------------........................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000100000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................CG------------------CCATCGCCCAGCGGATCAGCGGC...........................................................................................................2511.001100000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................ATAGCTGC------GAGAGAGGCG---.......................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000100
.....AAAATAGAGCAGCAGACAAACGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
......................AAACGAGA---------------------------------------------------------------------------------------------CGCAGT------------------------------------CAGCGTCGCAGT..................................................................................................................................................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGCGAGCCGCGAGGT1811.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................TCGCCCAGCGGATCAGCGGCATC........................................................................................................2311.001100000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................CGGCATCGTCTATAAATAGCTGC------GA..................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000001000000
...............................................................................................................................................................................GTCATCTCTCGGCT------------------CTCCG...............................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000001000000
.............GCAGCAGACAAACGAGA---------------------------------------------------------------------------------------------CGCAGT------------------------------------CAGC..........................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................GAGAGGCG---CAC---GCTCG------------C------------------------------------CATCCA.....................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................AGTCATCTCTCGGCT------------------CTCCGGCATCGTCC......................................................................................................................................................................................................................................................................2911.001000100000000000000000000000000000000000000000000000000000000000
...............AGCAGACAAACGAGA---------------------------------------------------------------------------------------------CGCAGT------------------------------------CAGCGT........................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................................................................................................................................................................................................GTCGTTGTCGTCAACATCGTC.................................................................2111.001000001000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................CATCGCCCAGCGGATCAGCGGCA..........................................................................................................2311.001100000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................GATCAGCGGCATCCGCAACGTCGT.............................................................................................2411.001000000000000000100000000000000000000000000000000000000000000000
..............................................................................................................................AGT------------------------------------CAGCGTCGCAGTCATCTCT...........................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................CTCGGCT------------------CTCCGGCATCGTCTA.....................................................................................................................................................................................................................................................................2211.001000000000000000000000000000010000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................CGTCGCCGACGTCGTTGTC.............................................................................1911.001000000000000000000000000000000000000000000000000000000000000100
........................................................................................................................................................................................................................................................G---CAC---GCTCG------------C------------------------------------CATCCACGTC------...........................................................................................................................................................2011.001000000000000000000000010000000000000000000000000000000000000000
..............CAGCAGACAAACGAGA---------------------------------------------------------------------------------------------CGC.....................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000010000000000000000000000000000000000000000000000
..................................................................................................................................................................................ATCTCTCGGCT------------------CTCCGGCATC..........................................................................................................................................................................................................................................................................2111.001100000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCGACATACGCGAGCCGCGAGG.2411.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................GATCAGCGGCATCCGCAAC..................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................AGAGGCG---CAC---GCTCG------------C------------------------------------CATCCACGTC------G..........................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................AGTCATCTCTCGGCT------------------CTCC................................................................................................................................................................................................................................................................................1911.001000000000000000000000000010000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................CAGCGGCATCCGCAACGTCGTCGC..........................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
AGACAAAAATAGAGCAGCAGACAAACGAGA---------------------------------------------------------------------------------------------TACAGT------------------------------------CGGCATCCACATCATCTCTTGGCT------------------CTCCGACATTGTCTATAAATAGCAGC---------GAGAGAGACACAC---AC------------------------------------------------------------------------TCG------------------CCATCGCCCAGCGGATCAGCG---ACG------TCGTCGTCGTCGCCATCGTCTTCAACATCGTCCGCCGCCTC----GTTCACTTGGCTGCG---GAACAGTTTGCCCGATATACGCGAGCCGCGAGGTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............................................................................................................................................................................................................................................................C---AC------------------------------------------------------------------------TCG------------------CCATCGCCCAGCG.....................................................................................................................1911.001100000
...........................................................................................................................................................................CCACATCATCTCTTGGCT------------------CT..................................................................................................................................................................................................................................................................................2011.001100000
.........................................................................................................................................................................................................................................................................................................................................................................CAGCGGATCAGCG---ACG------TCGTCGTC.........................................................................................2411.001100000
........................ACGAGA---------------------------------------------------------------------------------------------TACAGT------------------------------------CGGCATCCACA...................................................................................................................................................................................................................................................................................................................2311.001000001
................GCAGACAAACGAGA---------------------------------------------------------------------------------------------TACAGT------------------------------------CGG...........................................................................................................................................................................................................................................................................................................................2311.001000001
.........................................................................................................................................................................................................................GTCTATAAATAGCAGC---------GAGAGAGACAC......................................................................................................................................................................................................................................2711.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGGCTGCG---GAACAGTTTGCCC.....................2411.001000001
......................................................................................................................................................................................CTTGGCT------------------CTCCGACATTGTCT......................................................................................................................................................................................................................................................................2111.001000001
.....AAAATAGAGCAGCAGACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000001
........ATAGAGCAGCAGACAAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
....................................................................................................................................................................................CTCTTGGCT------------------CTCCGACATTGTCT......................................................................................................................................................................................................................................................................2311.001100000
.....................CAAACGAGA---------------------------------------------------------------------------------------------TACAGT------------------------------------CGGCAT........................................................................................................................................................................................................................................................................................................................2111.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTGCG---GAACAGTTTGCC......................2011.001000100
..............................................................................................................................................................................................................................................................................................................................................................................GATCAGCG---ACG------TCGTCGTCGT.......................................................................................2111.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................G------TCGTCGTCGTCGCCATCGTCT............................................................................2220.501000001
droGri2
AGACGAAAATAGTGCAGCAGACAAACGTGGACG-AGACGCAATCAACTGCCTCCGTCTCCGTCTCTGCCTCCGCCTCCGCCTCCGCCTCAGCATCAGCATCAACATCAGCGTCGTCAGCATCA--------------------------------TCGCTGC---TGCTTG---------------CCT------------------CTCCGACATCGTCTATAAATAGCTGC---------GAGAGCGGCGCA---------------------------------------------------------------------------------------------------GCATCGCCGAGCGATTCGGCG---ACG---------------------------TCAGCATCGTCGGTTGCCTC----TTTCACTTGGCTGCG---GAACAGTTTGCCCGATATACGCGAGCCGCGAGGTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGCGAGCCGCGAGGA1811.00110
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGTTTGCCCGATATACG.............1911.00110
.........................................................................................................................................................................................................................................................................................................................................................................GAGCGATTCGGCG---ACG---------------------------TC..........................................................................1811.00110
.............................................................................CGCCTCCGCCTCAGCATCAGCATC..............................................................................................................................................................................................................................................................................................................................................................................................2411.00110
...........................................................................................................................................................TCGCTGC---TGCTTG---------------CCT------------------CTCCGACAT...........................................................................................................................................................................................................................................................................2511.00110
.................................................................................................................................................................................................................................................................................................................................................................GCATCGCCGAGCGATTCGGCG---ACG---------------------------............................................................................2411.00110
......................................................................................................ACATCAGCGTCGTCAGCA...........................................................................................................................................................................................................................................................................................................................................................................1811.00110
.....................................................................................................AACATCAGCGTCGTCAGC............................................................................................................................................................................................................................................................................................................................................................................1811.00110
droAna3
AGCTGAAAATAGAGCAGCCGTCGGGCACCA---------------------------------------------------------------------------------------------ACAATA------------------------------------TGCCCT---------------GCT------------------CTCAGACGTTGGCTATTAATAGTTCC------CCGGAGAGGC---CAA---CCTCTTCGGCATCGTCTACATCGGGATCGATGCGTCCATCGGCCTCAGCGTCAGCCTCAGAATCACCTTCACAGCTT------------------CCATCGCCGAGCGGATCGGTG------------------------------------GCATCGTCCGCCGCCTC----GTTTACATGGCTGCA---TAACAGTTTGCCCGATATACGCGAGCCGCGAGGTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................................................................................................................................................................................................................GAGGC---CAA---CCTCTTCGGCATCGT..................................................................................................................................................................................................................2315.005300020
.............................................................................................................................................................................................................................ATTAATAGTTCC------CCGGAGA.............................................................................................................................................................................................................................................1912.002100001
......................................................................................................................................................................................................................................................GGC---CAA---CCTCTTCGGCATCGC..................................................................................................................................................................................................................2111.001010000
....................................................................................................................................................................................................................................................GAGGC---CAA---CCTCTTCGGCATCGTCTA...............................................................................................................................................................................................................2611.001100000
.......................................................................................................................................................................................................................................................................................................................................CACAGCTT------------------CCATCGCCGAGCGGATCGGTG------------------------------------.........................................................................2911.001000010
...........................................................................................................................................................................................................................................................................CATCGTCTACATCGGGATCGATGC................................................................................................................................................................................................2411.001000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATACGCGAGCCGCGAGG.2011.001000001
...............AGCCGTCGGGCACCA---------------------------------------------------------------------------------------------ACAAT...................................................................................................................................................................................................................................................................................................................................................................2011.001100000
........................................................................................................................................................................................................................................................................................................................................ACAGCTT------------------CCATCGCCGAGCGGATCGGT..............................................................................................................2711.001000010
.....................................................................................................................................................................................................................................................AGGC---CAA---CCTCTTCGGCATCGT..................................................................................................................................................................................................................2211.001100000
...........................................................................................................................................................................................................................................................................................................................................GCTT------------------CCATCGCCGAGCGGATC.................................................................................................................2111.001000010
.....................................................................................................................................................................................................................................................................................................................................................................................G------------------------------------GCATCGTCCGCCGCCTC----GT..................................................2011.001100000
..............................................................................................................................ATA------------------------------------TGCCCT---------------GCT------------------CTCAGACGTTGGC.......................................................................................................................................................................................................................................................................2511.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................GCATCGTCCGCCGCCTC----GTTTACAT............................................2511.001100000
.........................CACCA---------------------------------------------------------------------------------------------ACAATA------------------------------------TGCCCT---------------GCT------------------CTCAGAC.............................................................................................................................................................................................................................................................................2711.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................GCATCGTCCGCCGCCTC----GTTTACATGGC.........................................2811.001100000
.......................................................................................................................................................................................................................................................................................................................................CACAGCTT------------------CCATCGCCGAGCGGATC.................................................................................................................2511.001000001
......................................................................................................................................................................................................................................................GGC---CAA---CCTCTTCGGCATCGT..................................................................................................................................................................................................................2111.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCCCGATATACGCGAGCC.......2011.001010000
droBip1
AGCTGAAAATAGAGCAGCCGTCGGGCACAA---------------------------------------------------------------------------------------------GCACAA------------------------------------TGCCCT---------------GCT------------------CTCAGACGTTGGCTATTAATAGTTCC------CCGGAGAGTC---CCA---CCTCTTCGGCATCGTCTGAATCGGAATCGATGAGTCCATCGGCCTCA------GACTCAGCATCACCTTCACAACTT------------------CCATCGCCGAGCGGATCAGAG------------------------------------GCATCGTCGGCCGCCTC----GTTTACATGGCTGCA---CAACAGTTTGCCCGATATACGCGAGCCGCGAGGTSizeHit CountTotal NormTotal
No Reads
droKik1
AGCCAAAAATAGAGCAGACAACGGACACGG---------------------------------------------------------------------------------------------CTGCTA------------------------------------TGCCCT---------------GCTCTCCGT------------CTTCTCCATCGTCTATAAATAGTTCT------TCAGAGAGGA---CCG---GCTCT------------C------------------------------------AGCCAGAATCGGTGGCACCGTCG------------------CCGTCTCCGAGCGGATCTGTAGCCTCC---------------------------TCTTCGTCATCCACCGCATC----GTTTACGTGGCTGCG---CAATAGTTTGCCCGATATACGCGAGCCGCGAGGTSizeHit CountTotal NormTotal
No Reads
droFic1
AGCCGAAAATAGAGCAGACTGCGGAGACGC---------------------------------------------------------------------------------------------TCGCAA------------------------------------CGCCCT---------------GCT------------------CTCCGTCGCCGTCTATTAATAGTTCG------CCGGAGAGGG---TCG---ACTCT------------C------------------------------------AGTTGGAATCGGCCACTCCGCTG------------------GCATCTCCGACCGAATCGAAC---GCC---------------------------TCGACATCGTCCGCCGCCTC----GTTCACTTGGCTGCG---CAACAGTTTGCCAGACATCCGCGACTCGCGCGGTSizeHit CountTotal NormTotal
No Reads
droEle1
TGCCCAAAATAGAGCAGACTACGGACACCG---------------------------------------------------------------------------------------------CCGCAA------------------------------------CGCCAT---------------GCTCTCCGTGCT---------CTCCTTCGTTGTCTATTTATAGTTTT------CCTGAGAGGG---CCG---GCTCT------------C------------------------------------AGACCGAAATGTCTTCGCCTCTT------------------CCGTCCCCGACCGGATCGACC---ACA---------------------------TCAACGTCGTCTCTCGCCTC----GTTTACTTGGCTACG---TAACAGTTTGCCCGACATCCGCGAGCCGCGAGGTSizeHit CountTotal NormTotal
No Reads
droRho1
ACCCGAAAATAGAACAGACTGCCAATATCG---------------------------------------------------------------------------------------------CATTAA------------------------------------CGCCCT---------------GCTCTCCGTGCTCTCCGTCCTCTCCGCCGTTGTCTATTAATAGTTTC------CCTGAGAGGG---CAT---GCTCT------------C------------------------------------AGTCTAAATTGGATTTGCCGCTC------------------ACGTCGCCAACCGGATCGGCC---GTA---------------------------TCAACGTCGTCCGCTGCCTC----GTTCACTTGGCTGCG---CAACAGTTTGCCCGACATCCGCGAGCCGCGAGGTSizeHit CountTotal NormTotal
No Reads
droBia1
AGCCCAAAATAGAGCAAGCCATGAACACGGTCACACACACAGTCAA------------------------------------------------------------------------------------------------------------------------------ACACACAACTATTTGCT------------------CTTCATCGACGTCTATTAATAGTTCA------CCTGAAGGGG---CCG---GGTAT------------C------------------------------------AATCGGATTCTGCTTGGTCGCTG------------------TCA---------------------------------------------------TCGACGTCGTCTTCCACCAT----GTTCACTTGGCTTCA---CAACAGTTTGCCCGACATTCGCGAGTCGCAAGGTSizeHit CountTotal NormTotal
No Reads
droTak1
AGCCCAAAATAGAGCAGACTATAAGCACGG---------------------------------------------------------------------------------------------TCGCAA------------------------------------CGCCCT---------------GCT------------------CTCC---GTCGACTATTAATAGTTCC------CCGGAGAGGG---CCT---GCTCT------------C------------------------------------AATCGGAATCTACTTCGCCGCTG------------------CCATCGCCGTCCGGATCG------ACA---------------------------TTGACGTCGTCCGCCGCCTC----ATTCACTTGGCTGAG---CAACAGTTTGCCCGACATCCGCGAGTCGCGAGGTSizeHit CountTotal NormTotal
No Reads
droEug1
AGCCAAAAATAGACAAAACGGTGGACACAC---------------------------------------------------------------------------------------------CCGTAG------------------------------------CGCCCA---------------GCTCTC---------------ATTCTCCGTCGTCTATTAATAGTTAC------CAGGAGAGGG---CAA---GCTCT------------C------------------------------------AGT---------------CGCTG------------------CCATCGCCTACTGAATCG------GCA---------------------------TCGACGTCGTTCACAGTCTC----TTTAATTGAACTGCT---CAACAGTTTGCCGGGTACCGGCGAGACGTATGGTSizeHit CountTotal NormTotal
No Reads
dm3
AGACCGAAATAGAGCAGACTGCGGATACGG---------------------------------------------------------------------------------------------CTGCAT------------------------------------TAGCAT---------------GCT------------------CTCC---GTCGTCTATAAATAGTTCC------CCGGAGAGGG---CCA---GCTCC------------G------------------------------------AATCGGAATCGGCATCGCCGCTG------------------CCATCGCCGACCGGATCG------GCA---------------------------TCAACGTCGTCTGCCGCCTC----GTTCACTTGGCTACA---CAACAGTTTGCCAGATATCCGCGAGCCACGAGGTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................................................................................................................................................................................................................................................GG---CCA---GCTCC------------G------------------------------------AATCGGAATCGGC..............................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000200000000
....................................................................................................................................................................................................................................................................................................................................................................TCGCCGACCGGATCG------GCA---------------------------TCAACG......................................................................2412.0020000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................GACCGGATCG------GCA---------------------------TCAACGTCGTC.................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000
....................................................................................................................................................................................................................................................................TCC------------G------------------------------------AATCGGAATCGGCATCGCCGCTG------------------C.................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................CCGGATCG------GCA---------------------------TCAACGTCGT..................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................................ATAGTTCC------CCGGAGAGGG---CCA---GCT..............................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................CCA---GCTCC------------G------------------------------------AATCGGAATCGGCAT............................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...........GAGCAGACTGCGGATACGG---------------------------------------------------------------------------------------------........................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................................................................................G---CCA---GCTCC------------G------------------------------------AATCGGAATCG................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................ACTGCGGATACGG---------------------------------------------------------------------------------------------CTGCAT------------------------------------TA............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................TCC------CCGGAGAGGG---CCA---GCT..............................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
......................................................................................................................................................................................................................................................GGG---CCA---GCTCC------------G------------------------------------AATCGGAATCGGC..............................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..............................................................................................................................CAT------------------------------------TAGCAT---------------GCT------------------CTCC---GTC..........................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........................................................................................................................................................................................................................................................................................................................................................................................CA---------------------------TCAACGTCGTCTGCCGCC..........................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGCCGCCTC----GTTCACTTG...........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................TCC------------G------------------------------------AATCGGAATCGGCATCGCCGCTG------------------CCA...............................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................AGAGGG---CCA---GCTCC------------G------------------------------------AATCGG.....................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................AGGG---CCA---GCTCC------------G------------------------------------AATCGGAAA..................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...........GAGCAGACTGCGGATACGG---------------------------------------------------------------------------------------------CTGCAT------------------------------------T.............................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................ACTGCGGATACGG---------------------------------------------------------------------------------------------CTGCAT------------------------------------..............................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................ATCGCCGACCGGATCG------GCA---------------------------TC..........................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................GACCGGATCG------GCA---------------------------TCAACGTC....................................................................2111.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCTC----GTTCACTTGGCTA.......................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................CCA---GCTCC------------G------------------------------------AATCGGAATCGGCATCGCCG.......................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................CTCC------------G------------------------------------AATCGGAATCGGC..............................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TACGG---------------------------------------------------------------------------------------------CTGCAT------------------------------------TAGCAT---------------GCT------------------CTCC---.............................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................TAGTTCC------CCGGAGAGGG---CCA---G................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGTTTGCCAGATATCCG.............2111.0010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATCCGCGAGCCACGAGGT2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
............AGCAGACTGCGGATACGG---------------------------------------------------------------------------------------------CT......................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
....................................................................................................................................................................................................................................................GAGGG---CCA---GCTCC------------G------------------------------------AATCGGAATCGGCATC...........................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................TAGTTCC------CCGGAGAGGG---CCA---GC...............................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................GAATCGGCATCGCCGCTG------------------CCATCGC...........................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....CGAAATAGAGCAGACTGCGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................................................GTTCC------CCGGAGAGGG---CCA---GCT..............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TCAACGTCGTCTGCCGCCTC----G...................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................T---------------GCT------------------CTCC---GTCGTCTATAAATAGTTCC------....................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................GCTCC------------G------------------------------------AATCGGAATCGGCATCGCCGCTG------------------C.................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................TCGTCTGCCGCCTC----GTTCACT.............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................ATAGTTCC------CCGGAGAGGG---CCA---.................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................ATCGGAATCGGCATCGCCGCTG------------------CC................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................A---------------------------TCAACGTCGTCTGCCGCC..........................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................TCC---GTCGTCTATAAATAGTTCC------CCGGA...............................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................CAACGTCGTCTGCCGCCTC----GT..................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.....................CGGATACGG---------------------------------------------------------------------------------------------CTGCAT------------------------------------TAGCAT---------------.........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
........................................................................................................................................................................................................................................................................................................................AATCGGAATCGGCATCGCCGC......................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCAGATATCCGCGAGCC.......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..........................................................................................................................................................................................................................TCTATAAATAGTTCC------CCGGAGAGGG---CCA---.................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CGTCGTCTGCCGCCTC----GTT.................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.......................................................................................................................................................................GCAT---------------GCT------------------CTCC---GTCGTCTAT....................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................ACGG---------------------------------------------------------------------------------------------CTGCAT------------------------------------TAGCAT---------------GCT------------------....................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCCAGATATCCGCGAGCCACGAGGT2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........AGAGCAGACTGCGGATACGG---------------------------------------------------------------------------------------------CTG.....................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...........................................................................................................................................................................................................................................................................................................................................................................CCGGATCG------GCA---------------------------TCAACGTC....................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.........TAGAGCAGACTGCGGATACGG---------------------------------------------------------------------------------------------CTG.....................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ATACGG---------------------------------------------------------------------------------------------CTGCAT------------------------------------TAGCAT---------------GCT------------------....................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGATATCCGCGAGCCACGAG..2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGGCTACA---CAACAGTTTGC.......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................GCTG------------------CCATCGCCGACCGGATCG------GCA---------------------------............................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TAGAGCAGACTGCGGATACGG---------------------------------------------------------------------------------------------........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................CTGCAT------------------------------------TAGCAT---------------GCT------------------CTCC---GTC..........................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.....................................................................................................................................................................................................................................................AGGG---CCA---GCTCC------------G------------------------------------AATCGGAATCGGC..............................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........................................................................................................................................................................................................................................................................................................................................................................ACCGGATCG------GCA---------------------------TCAACGTC....................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................TAAATAGTTCC------CCGGAGAGGG---CCA---GC...............................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TCAACGTCGTCTGCCGCCTC----GTTC................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GCAGACTGCGGATACGG---------------------------------------------------------------------------------------------CTGC....................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
droSim2
AGACCGAAATAGAGCAGACTGCGGATACGG---------------------------------------------------------------------------------------------CTGCAT------------------------------------TAGCAT---------------GCT------------------CTCC---GTCGTCTATAAATAGTTCC------CCGGAGAGGG---CCA---GCTCT------------G------------------------------------AATCGGAATCGGCATCGCCGCTG------------------CCATCGCCGACCGGATCG------GCA---------------------------TCAACG---CT-------TCAAGTTTTCCTTTCGCTGCGATTCCACAACTAGCCACAGA-----GAGTC----GGTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................................................................................AATCGGAATCGGCATCGCCGCTG------------------C.................................................................................................................................2412.00201010000000000000
.............................................................................................................................................................................................................................................................CA---GCTCT------------G------------------------------------AATCGGAATCGG...............................................................................................................................................................2011.00101000000000000000
.......................................................................................................................................................................................................................................CC------CCGGAGAGGG---CCA---GCTCT------------G------------------------------------AATC.......................................................................................................................................................................2511.00110000000000000000
...............................................................................................................................AT------------------------------------TAGCAT---------------GCT------------------CTCC---GTCGT........................................................................................................................................................................................................................................................................2011.00100010000000000000
....................................................................................................................................................................................................................................................GAGGG---CCA---GCTCT------------G------------------------------------AATCGGA....................................................................................................................................................................2111.00110000000000000000
..............................................................................................................................CAT------------------------------------TAGCAT---------------GCT------------------CTCC---GTCGT........................................................................................................................................................................................................................................................................2111.00100010000000000000
...................................................................................................................................................................................................................................................................................G------------------------------------AATCGGAATCGGCATCGCCGCTG------------------C.................................................................................................................................2511.00101000000000000000
....................................................................................................................................................................................................................................................GAGGG---CCA---GCTCT------------G------------------------------------AATCGGAATC.................................................................................................................................................................2411.00100100000000000000
........................................................................................................................................................................................................................................................G---CCA---GCTCT------------G------------------------------------AATCGGAATC.................................................................................................................................................................2011.00100100000000000000
.................................................................................................................................................................................................................................................................................................................................................................CCATCGCCGACCGGATCG------..........................................................................................................1811.00100100000000000000
.............GCAGACTGCGGATACGG---------------------------------------------------------------------------------------------CTGC....................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000100000
...............................................................................................................................AT------------------------------------TAGCAT---------------GCT------------------CTCC---GTCGTCT......................................................................................................................................................................................................................................................................2211.00100010000000000000
........................................................................................................................................................................................................................................................G---CCA---GCTCT------------G------------------------------------AATCA......................................................................................................................................................................1580.13100000001000000000
droSec2
AGACCGAAATAGAGCAGACTGCGGATACGG---------------------------------------------------------------------------------------------CTGCAT------------------------------------TAGCAT---------------GCT------------------CTCC---GTCTTCTATAAATAGTTCC------CCGGAGAGGG-C-CCA---GCTCT------------G------------------------------------AATCGGAATCGGCATCGCCGCTG------------------CCATCGCCGACCGGATCG------GCA---------------------------TCAACGTCGTCTGCCGCCTC----GTTCACTTGGCTACA---CAACAGTTTGCCAGATATCCGCGAGCCACGAGGTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGCCTC----GTTCACTTGG..........................................1911.0011000
........ATAGAGCAGACTGCGGATACGG---------------------------------------------------------------------------------------------CTGC....................................................................................................................................................................................................................................................................................................................................................................2611.0011000
.........................................................................................................................................................................................................................................................................................................................................................................GACCGGATCG------GCA---------------------------TCAACGTCGT..................................................................2311.0010001
....................................................................................................................................................................................................................................................................................................................................CATCGCCGCTG------------------CCATCGCC..........................................................................................................................1911.0010010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCCGCGAGCCACGAG..1811.0010001
...............AGACTGCGGATACGG---------------------------------------------------------------------------------------------CTGCAT------------------------------------TAGCAT---------------.........................................................................................................................................................................................................................................................................................................2711.0010010
droYak3
AGACCGAAATAGAACAGACTGTGGACGCGA---------------------------------------------------------------------------------------------CTGCAT------------------------------------TAGCAT---------------GCT------------------CTCC---GTCGTCTATAAATAGTTCC------CCGGAGAGGG---CCA---GCTCC------------G------------------------------------AAT------------CGCCGTTG------------------CCGTCTCCGACCGGATCG------GCA---------------------------TCAACGTCGTCT---GCCTC----GTTCACTTGGCTGCA---CAACAGTTTGCCCGATATCCGCGAGCCACGAAGTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............AGACTGTGGACGCGA---------------------------------------------------------------------------------------------CTTT....................................................................................................................................................................................................................................................................................................................................................................1915.00505000000000
...............AGACTGTGGACGCGA---------------------------------------------------------------------------------------------CTT.....................................................................................................................................................................................................................................................................................................................................................................1813.00302000100000
.GACCGAAATAGAACAGACTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200100010000
..............................................................................................................................CAT------------------------------------TAGCAT---------------GCT------------------CTCC---GTCGT........................................................................................................................................................................................................................................................................2111.00101000000000
.......AATAGAACAGACTGTGGACGCGA---------------------------------------------------------------------------------------------CTG.....................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000
...........................................................................................................................................................................................................................................................................................................................................GTTG------------------CCGTCTCCGACCGGATCG------G.........................................................................................................2311.00100000010000
...........................................................................................................................................................................................................................CTATAAATAGTTCC------CCGGA...............................................................................................................................................................................................................................................1911.00101000000000
.......................................................................................................................................................................................................................................................................................................................................CGCCGTTG------------------CCGTCTCCGACCGGATC.................................................................................................................2511.00101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGTTTGCCCGATATCCGCG...........2111.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................................GATCG------GCA---------------------------TCAACGTCGTCT---GC...........................................................2211.00101000000000
..........AGAACAGACTGTGGACGCGA---------------------------------------------------------------------------------------------CTG.....................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
.......................................................................................................................................................................................................................................................................................................................................CGCCGTTG------------------CCGTCTCCGACCGGATCG------..........................................................................................................2611.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................CCGACCGGATCG------GCA---------------------------TCAACGTCGTCT---GC...........................................................2911.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................CTC----GTTCACTTGGCTGCA---C.................................1911.00101000000000
...............................................................................................................................AT------------------------------------TAGCAT---------------GCT------------------CTCC---GTCG.........................................................................................................................................................................................................................................................................1911.00100000010000
............................GA---------------------------------------------------------------------------------------------CTGCAT------------------------------------TAGCAT---------------GCT------------------CTCC---GTCGTCT......................................................................................................................................................................................................................................................................2811.00110000000000
.......AATAGAACAGACTGTGGACGCGA---------------------------------------------------------------------------------------------CT......................................................................................................................................................................................................................................................................................................................................................................2511.00110000000000
................................................................................................................................T------------------------------------TAGCAT---------------GCT------------------CTCC---GTCGTCT......................................................................................................................................................................................................................................................................2111.00100000010000
..................CTGTGGACGCGA---------------------------------------------------------------------------------------------CTGCAT------------------------------------T.............................................................................................................................................................................................................................................................................................................................1911.00100000010000
...............AGACTGTGGACGCGA---------------------------------------------------------------------------------------------CTTTG...................................................................................................................................................................................................................................................................................................................................................................2060.83504000010000
................GACTGTGGACGCGA---------------------------------------------------------------------------------------------CTTT....................................................................................................................................................................................................................................................................................................................................................................1890.11101000000000
droEre2
AGACCGAAATAGAGCAGACTGCGGACACGG---------------------------------------------------------------------------------------------CTGCAT------------------------------------TAGCAT---------------GCT------------------CTCC---GTCGTCTATAAATAGTTCC------CCGGAGAGGG---CCA---GTTCC------------G------------------------------------AATCGGAA------TCGCCGCTG------------------CCATCGCCGACCGGATCG------GCA---------------------------TCAACGTCGTCT---GCTTC----GTTCACTTGGCTGCA---CAACAGTTTGCCAGATATCCGCGAGCCACGAGGTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................A---------------------------TCAACGTCGTCT---GCTTC----GTT.................................................2111.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................GACCGGATCG------GCA---------------------------TCAACGTCGTC.................................................................2411.0011000000
............................................................................................................................TGCAT------------------------------------TAGCAT---------------GCT------------------CTCC---GTCGT........................................................................................................................................................................................................................................................................2311.0011000000
....CGAAATAGAGCAGACTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
.................................................................................................................................................................................................................................................................................................................................................................................CG------GCA---------------------------TCAACGTCGTCT---GC...........................................................1911.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTTGCCAGATATCCGCGAGC........2211.0010001000
.........................................................................................................................................................................................................................................................................................................................................................................GACCGGATCG------GCA---------------------------TCAACGTCGT..................................................................2311.0010001000
........................................................................................................................................................................................................................CGTCTATAAATAGTTCC------CCGGA...............................................................................................................................................................................................................................................2211.0010000010
................GACTGCGGACACGG---------------------------------------------------------------------------------------------CTGC....................................................................................................................................................................................................................................................................................................................................................................1811.0010010000
....................................................................................................................................................................................................................................................GAGGG---CCA---GTTCC------------G------------------------------------AATCG......................................................................................................................................................................1911.0010000100
.GACCGAAATAGAGCAGACTGCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100

Generated: 06/08/2015 at 04:39 PM