ID:

dpe_175

 Coordinate:

scaffold_75:4978-5048 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-53.5 -53.0 -52.7

Flybase annnotation

intergenic

No Repeatable elements found

mature
star
  1. dpe_175  scaffold_75:4983-5004 -
  2. scaffold_75:118007-118028 -
  3. scaffold_664:1156-1177 -

Sense Strand Reads

CGAATTGCACCCAAACAGCGACAGCCACATTCTGCAGGGTGCATGTCATAATGCCCAGGGGTGTTAAGACCCGAGGGCCTTATGACACAAAATTTAGTGTCTTAACGCCCGTGGGCGTTATGACAAGTACCCCATACTGCAAGGGGTCAGAGAACGTTACCAGTGCGCCAG
***********************************.((..((.((((((((((((((.(((((((((................(((((........)))))))))))))).)))))))))))))).)).))**************************************** 		Read size # Mismatch Hit Count Total Norm Total V057
head
 M042
female body
 V111
male body		 V050
head
 V042
embryo
 M021
embryo
..................................................ATGCCCAGGGGTGTTAAGAC..................................................................................................... 20 0 1 59.00 59 11 23 12 5 3 5
..................................................ATGCCCAGGGGTGTTAAGA...................................................................................................... 19 0 1 59.00 59 24 7 23 3 2 0
..................................................ATGCCCAGGGGTGTTAAG....................................................................................................... 18 0 1 22.00 22 14 5 2 1 0 0
..................................................ATGCCCAGGGGTGTTAAGT...................................................................................................... 19 1 1 21.00 21 5 3 8 5 0 0
................................................TAATGCCCAGGGGTGTTAAG....................................................................................................... 20 0 1 11.00 11 4 3 2 2 0 0
..................................................ATGCCCAGGGGTGTTAAGACC.................................................................................................... 21 0 1 4.00 4 0 4 0 0 0 0
..................................................ATGCCCAGGGGTGTTAAGTT..................................................................................................... 20 2 2 4.00 8 5 1 2 0 0 0
................................................TAATGCCCAGGGGTGTTA......................................................................................................... 18 0 1 3.00 3 3 0 0 0 0 0
..................................................ATGCCCAGGGGTGTTAAGACCC................................................................................................... 22 0 1 3.00 3 0 3 0 0 0 0
..................................................ATGCCCAGGGGTGTTAAGTC..................................................................................................... 20 1 1 2.00 2 0 0 0 1 0 1
..................................................ATGCCCAGGGGTGTTAAGAT..................................................................................................... 20 1 1 2.00 2 0 0 2 0 0 0
................................................TAATGCCCAGGGGTGTTAAGA...................................................................................................... 21 0 1 2.00 2 1 1 0 0 0 0
................................................TGATGCCTAGGGGTGTTAAGT...................................................................................................... 21 3 1 1.00 1 0 0 0 1 0 0
..................................................ATGGCCAGGGGTGTTAAGAA..................................................................................................... 20 2 1 1.00 1 0 0 0 0 1 0
....................................................GCCCAGGGGTGTTAAGAC..................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0
..................................................ATGCCCAGGGGTGTTAAGCC..................................................................................................... 20 1 1 1.00 1 0 0 0 1 0 0
................................................TAATGCCCAGGGGTGTTTT........................................................................................................ 19 2 1 1.00 1 0 0 1 0 0 0
................................................TGATGCCCAGGGGTGTTAAGA...................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
..................................................AAGCCCAGGGGTGTTAAGA...................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0
..................................................ATGCCCAGGGGTGTTAAC....................................................................................................... 18 1 1 1.00 1 1 0 0 0 0 0
.................................................AATGCCCAGGGGTGTTAAGAC..................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0
................................................TAATGCCCAGGGGTGTTAAA....................................................................................................... 20 1 1 1.00 1 0 0 0 1 0 0
..................................................ATGCCCAGGGGTTTTAAGA...................................................................................................... 19 1 1 1.00 1 0 0 1 0 0 0
................................................TGATGCCCAGGGGGGTTAAGAC..................................................................................................... 22 2 1 1.00 1 0 1 0 0 0 0
..................................................ATGCCCAGGGGTGTTAACA...................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0
..................................................ATGCCCAGGGGTGTTAAGACT.................................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0
..................................................ATGCCCAGGGGTGTTAAGCT..................................................................................................... 20 2 1 1.00 1 1 0 0 0 0 0
................................................TAATGCCCAGGGGTGTTAAGAC..................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0
..................................................ATGCCCAGGGGAGTTAAGAC..................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
................................................TAATGCCCAGGGGTGTTAA........................................................................................................ 19 0 1 1.00 1 0 1 0 0 0 0
..................................................................................................................................................TCAGAGAACGTTACCAGTGCGCCAG 25 0 1 1.00 1 0 1 0 0 0 0
................................................TAATGCCCAGGGGTGTTT......................................................................................................... 18 1 1 1.00 1 1 0 0 0 0 0
..................................................ATGCCCAGAGGTGTTAAGAC..................................................................................................... 20 1 1 1.00 1 0 1 0 0 0 0
................................................TAATGCCCAGGCGTGTTAAGAT..................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
................................................TAATGCCCAGCGGTGTTA......................................................................................................... 18 1 1 1.00 1 1 0 0 0 0 0
..................................................GTGCCCAGGGGTGTTAAG....................................................................................................... 18 1 1 1.00 1 1 0 0 0 0 0
...................................................TGCCCAGGGGTGTTAAGAC..................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0
..................................................ATGCCCAGGGTCGTTAAGAC..................................................................................................... 20 2 1 1.00 1 1 0 0 0 0 0
............................................................................................................CCGTGGGCGTTATGACAAGTACCC....................................... 24 0 1 1.00 1 0 0 0 0 1 0
..................................................ATGCCCAGGGGTGTTAAGAA..................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
..................................................TTGCCCAGGGGTGTTAAG....................................................................................................... 18 1 1 1.00 1 1 0 0 0 0 0
..................................................ATCCCCAGGGGTGTTAAGAC..................................................................................................... 20 1 1 1.00 1 0 1 0 0 0 0
..................................................GTGCCCAGGGGTGTTAAGAA..................................................................................................... 20 2 1 1.00 1 1 0 0 0 0 0
..............................................................................................TAGTGTCTTAACGCCCGTGGGC....................................................... 22 0 3 0.67 2 0 2 0 0 0 0
..................................................ATGCCCAGGGGTGTTAAGTTT.................................................................................................... 21 3 3 0.67 2 1 0 0 1 0 0
..............................................................................................TAGTGTCTTAACGCCCGTGGGCGTTA................................................... 26 0 2 0.50 1 0 1 0 0 0 0
..................................................ATGCCCAGGGGGGTTAGG....................................................................................................... 18 2 2 0.50 1 1 0 0 0 0 0
..................................................ATGCCCAGGGGTGTAAAG....................................................................................................... 18 1 2 0.50 1 1 0 0 0 0 0
.................................................................................................TGTCTTAACGCCCGTGGGCGT..................................................... 21 0 4 0.50 2 0 2 0 0 0 0
..................................................ATGCCCAGGGGTGTTAAGCA..................................................................................................... 20 2 2 0.50 1 1 0 0 0 0 0
..................................................ATGCCCAGGGGTGTTAAA....................................................................................................... 18 1 2 0.50 1 0 0 0 1 0 0
..............................................................................................TAGTGTCTTAACGCCCGTGGGCGTT.................................................... 25 0 3 0.33 1 0 1 0 0 0 0
.........................................................................................AAATTTAGTGTCTTCACGCCCGTGGGC....................................................... 27 1 3 0.33 1 0 0 0 0 1 0
.......................................................................................CAAAATTTAGTGTCTTAACGCCCGTGG......................................................... 27 0 3 0.33 1 0 0 1 0 0 0
.............................................................................................TTAGTGTCTTAACGCCCGTGGGCGTT.................................................... 26 0 3 0.33 1 0 1 0 0 0 0
..............................................................................................TAGTGTCTTAACGCCCGTGGGCG...................................................... 23 0 3 0.33 1 0 1 0 0 0 0
..................................................................................TGACACAAAATTTAGTGTCTTAACGCCCG............................................................ 29 0 3 0.33 1 0 1 0 0 0 0
.......................................................................................CAAAATTTAGTGTCTTAACGCCCGTG.......................................................... 26 0 3 0.33 1 0 1 0 0 0 0
............................................................................................TTTAGTGTCTTAACGCCCGTGGGC....................................................... 24 0 3 0.33 1 0 1 0 0 0 0
..................................................................................................GTCTTAACGCCCGTGGGCGTTA................................................... 22 0 3 0.33 1 0 1 0 0 0 0
.................................................................................................TGTCTTAACGCCCGTGGGCG...................................................... 20 0 4 0.25 1 0 1 0 0 0 0
..................................................................................................GTCTTAACGCCCGTGGGCGTTT................................................... 22 1 4 0.25 1 0 1 0 0 0 0
..................................................ATGCCCAGGGGTCTTCAG....................................................................................................... 18 2 4 0.25 1 1 0 0 0 0 0
..................................................ATGCCCATGGGGGTTAAGA...................................................................................................... 19 2 5 0.20 1 1 0 0 0 0 0
..................................................ATGCACAGGGGGGTTAAG....................................................................................................... 18 2 5 0.20 1 1 0 0 0 0 0
..................................................ATGCCCAGGGGTGTTACGGT..................................................................................................... 20 3 6 0.17 1 1 0 0 0 0 0
.................................................................................................TGTCTTAGCGCCCGCGGGCGT..................................................... 21 2 6 0.17 1 1 0 0 0 0 0
..................................................ATGCCCAAGGGCGTTAAGA...................................................................................................... 19 2 6 0.17 1 1 0 0 0 0 0
..........CCAAACAGCGACAGCCACATTC........................................................................................................................................... 22 0 11 0.09 1 0 1 0 0 0 0

Anti-sense strand reads

GCTTAACGTGGGTTTGTCGCTGTCGGTGTAAGACGTCCCACGTACAGTATTACGGGTCCCCACAATTCTGGGCTCCCGGAATACTGTGTTTTAAATCACAGAATTGCGGGCACCCGCAATACTGTTCATGGGGTATGACGTTCCCCAGTCTCTTGCAATGGTCACGCGGTC
****************************************.((..((.((((((((((((((.(((((((((................(((((........)))))))))))))).)))))))))))))).)).))*********************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V057
head
 V111
male body
...................................................................................................................................GGTATGACGTTCCCCAGTCTCTTGC............... 25 0 1 1.00 1 1 0 0
..................................................................................................................................GGGTATGACGTTCCCCAGTCTCT.................. 23 0 1 1.00 1 1 0 0
..........................................................................CCCGGAATACTGTGTTTTAGATCA......................................................................... 24 1 3 0.33 1 1 0 0
.......................................................................GCTCCCGGAATACTGTGTTTTAAAT........................................................................... 25 0 3 0.33 1 1 0 0
......................................................................GGCTCCCGGAATACTGTGTTTTAAAT........................................................................... 26 0 3 0.33 1 1 0 0
........................................................................CTCCCGGAATACTGTGTTTTAAAT........................................................................... 24 0 3 0.33 1 1 0 0
.....................................................................GGGCTCCCGGAATACTGTGTTTTAAAT........................................................................... 27 0 3 0.33 1 1 0 0
.......................................................................GCTCCCGGAATACTGTGTTTT............................................................................... 21 0 3 0.33 1 1 0 0
.....................................................................GGGCTCCCGGAATACTGTGTT................................................................................. 21 0 5 0.20 1 1 0 0
...................................................................................................AGAATTGCGGGAACCCGTA..................................................... 19 2 6 0.17 1 0 1 0
.........GGGTTTGTCGCTGTCGGTG............................................................................................................................................... 19 0 13 0.15 2 1 0 1
........................................................................................................................................GACGTTCCCCAGTCTCTT................. 18 0 8 0.13 1 1 0 0
.......................CGGTGTCAGTCGTCCCAC.................................................................................................................................. 18 2 9 0.11 1 1 0 0
................TCGCTGTCGGTGTAAGACGT....................................................................................................................................... 20 0 11 0.09 1 1 0 0
........TGGGTTTGGCGCACTCGGTGT.............................................................................................................................................. 21 3 15 0.07 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_75:4928-5098 - dpe_175 CG------AATT------GCACCCAAACAGCGACAGCCACATTCTGCAGGGTGCATGTCATAATGCCCAGGGGTGTTAAGACCCGAGG-----------------------------GCCTTATGACACAAAATTTAGTGTCTTAACGCCCGTGGGCGTTATGACAAGTACCCCA--TACTGCAAGGGGTCAGAGAACGTTACCAGTGCGCCAG
dp5 Unknown_group_91:1964-2062 - CG------AATT------GCACCCAAACAGCGACAGCCACATTCTGCAGGGTGCATGTCATAATGCCCAGGGGCGTTAAGACCCGAGG-----------------------------GCCTTATGACACAAAATTTAGTG--------------------------------------------------------------------------
droWil2 scf2_1100000004949:653018-653120 - AC------AAAT------GCATTT-----TCAGGGTACATGTCATAACGC----------------CCAGTG-TCATAAGGCCCTTGGGCCTT-----------------------------ATGTCGCAAAAATGTGTGTCTTAGCGCCCATGGGCGCTAAGACA------------------------------------------------
droVir3 scaffold_13050:1966717-1966852 - CA------AATT------GTTTACAAACAGTAACTGCCACATTCTGCAAG----------------CAGTCC-GTAAGGATCCATTGCACGCAAGGTCTCC-----------ATGGCTCATTGTCAAACGCAGCCTAGTCACCTCGGCCCTG----------------TCAACATAATGGACAACGGAATCA----------------------
droMoj3 scaffold_6680:23371725-23371848 + CA------AACT------GCAAGCCAACGACCACGACAGTATTCTGCGAG----------------CGGGCA-CTCAGCGAAACTTGCGCCCAAGGTTTGCACTCTGGAGGCACGGCGCATTGTGTGACTCAGCCCAGCCATCTGGACCCCA----------------T---------------------------------------------
droAna3 scaffold_13469:247828-248002 + AA------AACT------GCTCTTTGACAGCAGGGGCTACATTTTGTCGG----------------CTGGCG-CGAAGAAGATCATGCGCTCAAGAGCTCCACGCTGGAGGCACGGCACATTGCGAGATCCAGCAAAGCGATTTACACCGA-TGGG-GTGA-------TGACCTATGTTGATGAGGGGATTGTAAT-CATAAATGATAGCCCGG
droBip1 scf7180000394318:2567-2735 + AA------AAGT------GCTCCCCGACATCAGGAGCTACATTTTGCCGA----------------CTGGCT-CGCAGAAGATCATGCGCCCAAGAGTTTCATGCTGGAGGCACGGCGCATTGCGAGATCCAACAAAGCGATTTACACCCCA----------------TCACTTACGTTTATGAAGGGATAATTGTAAAGTAATTGTAAATTAA
droKik1 scf7180000302353:475-627 + AA------AACT------GCTCCGTATCACCGGGAGCCGCATTCTGCCGC----------------CTTGCT-TCAGAGAGTACGTGCGCCAGAGAACTGCACGCCGGTGGGGTGGCACACTGCCGAATACAAGAGAGTGACCTGCACCCTA----------------TAACCTATGTGGACGAAGGGATTGTAAT-CA---------------
droFic1 scf7180000453277:202854-202948 - TT------C-------------------TATAGGGTGCATGTCATAACGC----------------CCAGTG-TCATAGCGCCCACGGGCGTT-----------------------------ATGACACAAACAATTGTGTCATAGCGCCCGCGGGCGTTCTGACA------------------------------------------------
droEle1 scf7180000490682:26301-26468 + AA------AATT------GCTCTGTAACACTGGGAGCCACCTTTTGCCAA----------------TTGGCG-CTAAGAAGGTCATGCGTCCAGGAAATCCACGCTGGGGGCATAGCTCATTGCGACATCCAATACTGCGATTTAAATCCCG----------------TTTTCTACATAGATGAAGGTATAATAAT-TGTAAACAATTGTCCGG
droRho1 scf7180000773850:15404-15560 - CAAGTTGAAACT------GCACCGCAACACCTGGTGCCACATTCTGTCAG----------------CTATCT-GTGAGTGGCTCATGCGCCAGAGATCTTCACGCAGGAGGTGTTGCGCATTGCGATACCCAACCGAGTGACTTGTACCCGG----------------TCACTCAAGTGGATGAAGGCACTATCAT------------------
droBia1 scf7180000301584:20105-20237 + GA-------GCT------GCACCGTCTCGCCGGGGGCCACATTTTGACC---------------------------------TCATGCGCAAGGGAAATACACGCAGGGGGCACGGCACATTGCGAGATTCAGCCTAGCGACCTGGAGGCGA----------------TCACCGAGGTAGACGAGGGGATTATCA-------------------
droTak1 scf7180000412642:18787-18914 + GG------AT-GGTATCAAGGCAGCGTTAAAGGGGTGCATGTCATAACGC----------------CCGGTG-TCATAACGCCCGTGGGC-------------------GTTATGACACACT----------CAAAAGTGTCATAGGGCCCGTGGGCCTTATGACA-----------CACTTCAAAGTGTCA----------------------
droEug1 scf7180000409501:22892-23014 - AC------AATT------GCTCCACAACACCTGGAGCCACATTTTGCCAG----------------CTGGCG-TTAAGAAGGTCGTGCGCACAAGAGCTCCACGCTGGAGGCATAGCGCACTATGACATCCAGCACAGCGATCTACACCCAG--------------------------------------------------------------
dm3 chrUextra:13418392-13418513 + AA------AACT------GCTCCGAATCACCGAGAGCCACATTCTGCCGC----------------CTAGCT-TCAGAGAGTTCGTGCGCCAAAGAACTGCACGCCGGTGGGGTAGCACACTGCCGAGTACAAGAGAGTGACCTGCATCTG---------------------------------------------------------------
droSim2 2l:22074906-22075039 + AA------AACT------GCACCCCAACACCGGGAGCTACCTTTTGCCAA----------------CTATCA-ACGGAAAGCTCATGCGCCAGGGAACTACACGCAGGCGTTCTAGCGTATTGTGAGTCACAACCAAGCGACCTACACCCGC----------------TTACCCGCGTG-----------------------------------
droSec2 scaffold_39:6110-6243 + AA------GATT------GCACCCCGACACCGTGGGCTACCTTTTGCCAA----------------CTATCA-ATGGACAGCTCATGCGCCAGGGAACTACACGCAGGCGTCCTAGCGCATTGTGAGTCGCAACCAAGCGACCTACACCCGC----------------TTACCCGCGTG-----------------------------------
droYak3 v2_chrUn_001:312894-313019 + AA------AACT------GCTCCGAATCACCGAGAGCCACATTCTGCCGC----------------CTAGCT-TCAGAGAGTTCGTGCGCCAAAGAACTGCACGCCGGTGGGGTAGCACACTGCCGAGTACAAGAAAGTGACCTGCATCCGA----------------TAG-------------------------------------------
droEre2 scaffold_4845:653946-654067 + AA------AACT------GCTCCGAATCACCGAGAGCCACATTCTGCCGC----------------CTAGCT-TCAGAGAGTCCGTGCGCCAAAGAACTGCACGCCGGTGGGGTAGCACACTGCCGAGTACAAGAAAGTGACCTGCATCCG---------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
CG------AATT------GCACCCAAACAGCGACAGCCACATTCTGCAGGGTGCATGTCATAATGCCCAGGGGTGTTAAGACCCGAGG-----------------------------GCCTTATGACACAAAATTTAGTGTCTTAACGCCCGTGGGCGTTATGACAAGTACCCCA--TACTGCAAGGGGTCAGAGAACGTTACCAGTGCGCCAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................................ATGCCCAGGGGTGTTAAGAC....................................................................................................................................20159.0059523351112
..............................................................ATGCCCAGGGGTGTTAAGA.....................................................................................................................................19159.005907232423
..............................................................ATGCCCAGGGGTGTTAAG......................................................................................................................................18122.00220501142
..............................................................ATGCCCAGGGGTGTTAAGT.....................................................................................................................................19121.0021030558
............................................................TAATGCCCAGGGGTGTTAAG......................................................................................................................................20111.0011030242
..............................................................ATGCCCAGGGGTGTTAAGACC...................................................................................................................................2114.004040000
..............................................................ATGCCCAGGGGTGTTAAGTT....................................................................................................................................2024.008010052
............................................................TAATGCCCAGGGGTGTTA........................................................................................................................................1813.003000030
..............................................................ATGCCCAGGGGTGTTAAGACCC..................................................................................................................................2213.003030000
..............................................................ATGCCCAGGGGTGTTAAGAT....................................................................................................................................2012.002000002
............................................................TAATGCCCAGGGGTGTTAAGA.....................................................................................................................................2112.002010010
................................................................GCCCAGGGGTGTTAAGAC....................................................................................................................................1811.001010000
............................................................TAATGCCCAGGGGTGTTTT.......................................................................................................................................1911.001000001
..............................................................ATGCCCAGGGGTGTTAAC......................................................................................................................................1811.001000010
.............................................................AATGCCCAGGGGTGTTAAGAC....................................................................................................................................2111.001010000
............................................................TAATGCCCAGGGGTGTTAAA......................................................................................................................................2011.001000100
..............................................................ATGCCCAGGGGTGTTAAGACT...................................................................................................................................2111.001000001
..............................................................ATGCCCAGGGGTGTTAAGCT....................................................................................................................................2011.001000010
............................................................TAATGCCCAGGGGTGTTAAGAC....................................................................................................................................2211.001010000
............................................................TAATGCCCAGGGGTGTTAA.......................................................................................................................................1911.001010000
.............................................................................................................................................................................................TCAGAGAACGTTACCAGTGCGCCAG2511.001010000
............................................................TAATGCCCAGGGGTGTTT........................................................................................................................................1811.001000010
...............................................................TGCCCAGGGGTGTTAAGAC....................................................................................................................................1911.001010000
.....................................................................................................................................................CCGTGGGCGTTATGACAAGTACCC.........................................2411.001001000
..............................................................ATGCCCAGGGGTGTTAAGAA....................................................................................................................................2011.001000010
.......................................................................................................................................TAGTGTCTTAACGCCCGTGGGC.........................................................2230.672020000
..............................................................ATGCCCAGGGGTGTTAAGTTT...................................................................................................................................2130.672000110
.......................................................................................................................................TAGTGTCTTAACGCCCGTGGGCGTTA.....................................................2620.501010000
..........................................................................................................................................TGTCTTAACGCCCGTGGGCGT.......................................................2140.502020000
..............................................................ATGCCCAGGGGTGTTAAGCA....................................................................................................................................2020.501000010
..............................................................ATGCCCAGGGGTGTTAAA......................................................................................................................................1820.501000100
.......................................................................................................................................TAGTGTCTTAACGCCCGTGGGCGTT......................................................2530.331010000
................................................................................................................................CAAAATTTAGTGTCTTAACGCCCGTGG...........................................................2730.331000001
......................................................................................................................................TTAGTGTCTTAACGCCCGTGGGCGTT......................................................2630.331010000
.......................................................................................................................................TAGTGTCTTAACGCCCGTGGGCG........................................................2330.331010000
...........................................................................................................................TGACACAAAATTTAGTGTCTTAACGCCCG..............................................................2930.331010000
................................................................................................................................CAAAATTTAGTGTCTTAACGCCCGTG............................................................2630.331010000
.....................................................................................................................................TTTAGTGTCTTAACGCCCGTGGGC.........................................................2430.331010000
...........................................................................................................................................GTCTTAACGCCCGTGGGCGTTA.....................................................2230.331010000
..........................................................................................................................................TGTCTTAACGCCCGTGGGCG........................................................2040.251010000
...........................................................................................................................................GTCTTAACGCCCGTGGGCGTTT.....................................................2240.251010000
......................CCAAACAGCGACAGCCACATTC..........................................................................................................................................................................22110.091010000
dp5
CG------AATT------GCACCCAAACAGCGACAGCCACATTCTGCAGGGTGCATGTCATAATGCCCAGGGGCGTTAAGACCCGAGG-----------------------------GCCTTATGACACAAAATTTAGTG--------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droWil2
AC------AAAT------GCATTT-----TCAGGGTACATGTCATAACGC----------------CCAGTG-TCATAAGGCCCTTGGGCCTT-----------------------------ATGTCGCAAAAATGTGTGTCTTAGCGCCCATGGGCGCTAAGACA------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................................TAACGC----------------CCAGTG-TCATAAGGC....................................................................................................................................21200.5010000010
...................................................................CAGTG-TCATAAGGCCCTTGGGCC...........................................................................................................................23200.05100001
..........................................CATAACGC----------------CCAGTG-TCATAAGGCCCTTG...............................................................................................................................28200.05101000
..........................................CATAACGC----------------CCAGTG-TCATAAGGCCC..................................................................................................................................25200.05100010
...........................................ATAACGC----------------CCAGTG-TCATAAGG.....................................................................................................................................21200.05100001
.........................................................................................................................................GTGTCTTAGCGCCCATGGGCG........................................................21200.05101000
...................................................................CAGTG-TCATAAGGCCCTTGGG.............................................................................................................................21200.05101000
....................................................................AGTG-TCATAAGGCCCTTGGGC............................................................................................................................21200.05101000
.............................................AACGC----------------CCAGTG-TCATAAGGCC...................................................................................................................................21200.05110000
...............................................................................................................................GCAAAAATGTGTGTCTTAGC...................................................................20200.05100010
.........................................TCATAACGC----------------CCAGTG-TCATAAG......................................................................................................................................22200.05100001
droVir3
CA------AATT------GTTTACAAACAGTAACTGCCACATTCTGCAAG----------------CAGTCC-GTAAGGATCCATTGCACGCAAGGTCTCC-----------ATGGCTCATTGTCAAACGCAGCCTAGTCACCTCGGCCCTG----------------TCAACATAATGGACAACGGAATCA----------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................................TCTGCAAG----------------CAGTCC-GTAAGGATCCA..................................................................................................................................2580.252000000000000000000000000000010000000000100000000000000000000000
.........................................TTCTGCAAG----------------CAGTCC-GTAAGGATCCA..................................................................................................................................2670.141000000000000000000000000000000100000000000000000000000000000000
.........................................TTCTGCAAG----------------CAGTCC-GTAAGG.......................................................................................................................................2170.141000000000000000000000000000000100000000000000000000000000000000
......................................ACATTCTGCAAG----------------CAGTCC-GTA..........................................................................................................................................2170.141000000000000000000000000000000100000000000000000000000000000000
..........................................................................TAAGGATCCATTGCACGCAA........................................................................................................................2070.141000000000000000000000000000010000000000000000000000000000000000
...................................GCCACATTCTGCAAG----------------CAGTCC-GTAAGG.......................................................................................................................................2770.141000000000000000000000000000010000000000000000000000000000000000
......................................................................CC-GTAAGGATCCATTGCACGC..........................................................................................................................2180.131000000000000000000000000000000010000000000000000000000000000000
...........................................CTGCAAG----------------CAGTCC-GTAAGGAT.....................................................................................................................................2180.131000000000000000000000000000000100000000000000000000000000000000
............................................TGCAAG----------------CAGTCC-GTAAGGATCCATTG...............................................................................................................................2680.131000000000000000000000000000000010000000000000000000000000000000
............................................TGCAAG----------------CAGTCC-GTAAGGATC....................................................................................................................................2180.131000000000000000000000000000010000000000000000000000000000000000
.............................................GCAAG----------------CAGTCC-GTAAGGATCCATTG...............................................................................................................................2580.131000000000000000000000000000010000000000000000000000000000000000
....................................CCACATTCTGCAAG----------------CAGTCC-G............................................................................................................................................2180.131000000000000000000000000000001000000000000000000000000000000000
...............................AACTGCCACATTCTGCAAG----------------CA..................................................................................................................................................2180.131000000000000000000000000000010000000000000000000000000000000000
.............................................GCAAG----------------CAGTCC-GTAAGGATCC...................................................................................................................................2180.131000000000000000000000000000010000000000000000000000000000000000
..........................................TCTGCAAG----------------CAGTCC-GTAAGGATC....................................................................................................................................2380.131000000000000000000000000000000000100000000000000000000000000000
..................................................................CAGTCC-GTAAGGATCCATTGC..............................................................................................................................2180.131000000000000000000000000000000010000000000000000000000000000000
..................................TGCCACATTCTGCAAG----------------CAGTCC-G............................................................................................................................................2380.131000000000000000000000000000000010000000000000000000000000000000
...............................................AAG----------------CAGTCC-GTAAGGATCCAT.................................................................................................................................2180.131000000000000000000000000000010000000000000000000000000000000000
...............................AACTGCCACATTCTGCAAG----------------C...................................................................................................................................................20110.091000000000000000000000000000010000000000000000000000000000000000
droMoj3
CA------AACT------GCAAGCCAACGACCACGACAGTATTCTGCGAG----------------CGGGCA-CTCAGCGAAACTTGCGCCCAAGGTTTGCACTCTGGAGGCACGGCGCATTGTGTGACTCAGCCCAGCCATCTGGACCCCA----------------T---------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................................TTGCGCCCAAGGTTTGCACTC.............................................................................................................2120.501000010
.........ACT------GCAAGCCAACGACCACGA..................................................................................................................................................................................2120.501100000
droAna3
AA------AACT------GCTCTTTGACAGCAGGGGCTACATTTTGTCGG----------------CTGGCG-CGAAGAAGATCATGCGCTCAAGAGCTCCACGCTGGAGGCACGGCACATTGCGAGATCCAGCAAAGCGATTTACACCGA-TGGG-GTGA-------TGACCTATGTTGATGAGGGGATTGTAAT-CATAAATGATAGCCCGGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................................................................GAAGATCATGCGCTCAAGAGCTCCAC...............................................................................................................26200.306600000
.............................................................................GAAGATCATGCGCTCAAGAGCTCCA................................................................................................................25200.102000020
.....................................................................................TGCGCTCAAGAGCTCCACGCT............................................................................................................21200.102200000
.............................................................................GAAGATCATGCGCTCAAGAG.....................................................................................................................20200.102200000
.............................................................................GAAGATCATGCGCTCAAGAGCT...................................................................................................................22200.102020000
......................................................................................................................CATTGCGAGATCCAGCAAAGCGATT.......................................................................25200.102200000
.............................................................................GAAGATCATGCGCTCAAGAGCTCCACGCT............................................................................................................29200.051100000
............................AGCAGGGGCTACATTTTGTCGG----------------CTGG................................................................................................................................................26200.051010000
..............................................................................................GAGCTCCACGCTGGAGGCACGG..................................................................................................22200.051100000
.....................................................................................................................ACATTGCGAGATCCAGCAAAGCGATT.......................................................................26200.051100000
..................................GGCTACATTTTGTCGG----------------CTGGCG-CGA..........................................................................................................................................25200.051100000
.............................................................................................................................................................................TATGTTGATGAGGGGATA.......................18200.051010000
............................AGCAGGGGCTACATTTTGTCGG----------------C...................................................................................................................................................23200.051010000
.....................................TACATTTTGTCGG----------------CTGGCG-CGA..........................................................................................................................................22200.051100000
..................................................................................................TCCACGCTGGAGGCACGGCACATTGCGA........................................................................................28200.051100000
.....................................................................................................................................................................................TGAGGGGATTGTAAT-CATAAATGAT.......25200.051010000
.............................................................................................................................................................................TATGTTGATGAGGGGATTGTAAT-.................23200.051100000
...................................GCTACATTTTGTCGG----------------CTGGCG-C............................................................................................................................................22200.051100000
.....................................TACATTTTGTCGG----------------CTGGCG-CGAA.........................................................................................................................................23200.051000010
.............................................................................GAAGATCATGCGCTCAAGAGCTC..................................................................................................................23200.051010000
.......................................CATTTTGTCGG----------------CTGGCG-CGAAGAAGA....................................................................................................................................26200.051100000
............................AGCAGGGGCTACATTTTGTCGG----------------CTGGC...............................................................................................................................................27200.051100000
.............................GCAGGGGCTACATTTTGTCGG----------------C...................................................................................................................................................22200.051000001
................................GGGGCTACATTTTGTCGG----------------CTGGC...............................................................................................................................................23200.051100000
................................................................................................................ACGGCACATTGCGAGATCCAGCAAAGC...........................................................................27200.051010000
............................................................................AGAAGATCATGCGCTCAAGAGCT...................................................................................................................23200.051010000
.............................................................................GAAGATCATGCGCTCAAGAGCTCCACGC.............................................................................................................28200.051000010
.....................................TACATTTTGTCGG----------------CTGGCG-CGAAGAA......................................................................................................................................26200.051100000
...................................GCTACATTTTGTCGG----------------CTGGCG-CGA..........................................................................................................................................24200.051100000
......................................................................................GCGCTCAAGAGCTCCACGCTGGAGGC......................................................................................................26200.051000001
.....................................TACATTTTGTCGG----------------CTGGCG-CGAAGAAG.....................................................................................................................................27200.051100000
...............................................................................................................................................................................................GTAAT-CATAAATGATAGCCCGG22200.051001000
droBip1
AA------AAGT------GCTCCCCGACATCAGGAGCTACATTTTGCCGA----------------CTGGCT-CGCAGAAGATCATGCGCCCAAGAGTTTCATGCTGGAGGCACGGCGCATTGCGAGATCCAACAAAGCGATTTACACCCCA----------------TCACTTACGTTTATGAAGGGATAATTGTAAAGTAATTGTAAATTAASizeHit CountTotal NormTotal
No Reads
droKik1
AA------AACT------GCTCCGTATCACCGGGAGCCGCATTCTGCCGC----------------CTTGCT-TCAGAGAGTACGTGCGCCAGAGAACTGCACGCCGGTGGGGTGGCACACTGCCGAATACAAGAGAGTGACCTGCACCCTA----------------TAACCTATGTGGACGAAGGGATTGTAAT-CA---------------SizeHit CountTotal NormTotal
No Reads
droFic1
TT------C-------------------TATAGGGTGCATGTCATAACGC----------------CCAGTG-TCATAGCGCCCACGGGCGTT-----------------------------ATGACACAAACAATTGTGTCATAGCGCCCGCGGGCGTTCTGACA------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
AA------AATT------GCTCTGTAACACTGGGAGCCACCTTTTGCCAA----------------TTGGCG-CTAAGAAGGTCATGCGTCCAGGAAATCCACGCTGGGGGCATAGCTCATTGCGACATCCAATACTGCGATTTAAATCCCG----------------TTTTCTACATAGATGAAGGTATAATAAT-TGTAAACAATTGTCCGGSizeHit CountTotal NormTotal
No Reads
droRho1
CAAGTTGAAACT------GCACCGCAACACCTGGTGCCACATTCTGTCAG----------------CTATCT-GTGAGTGGCTCATGCGCCAGAGATCTTCACGCAGGAGGTGTTGCGCATTGCGATACCCAACCGAGTGACTTGTACCCGG----------------TCACTCAAGTGGATGAAGGCACTATCAT------------------SizeHit CountTotal NormTotal
No Reads
droBia1
GA-------GCT------GCACCGTCTCGCCGGGGGCCACATTTTGACC---------------------------------TCATGCGCAAGGGAAATACACGCAGGGGGCACGGCACATTGCGAGATTCAGCCTAGCGACCTGGAGGCGA----------------TCACCGAGGTAGACGAGGGGATTATCA-------------------SizeHit CountTotal NormTotal
No Reads
droTak1
GG------AT-GGTATCAAGGCAGCGTTAAAGGGGTGCATGTCATAACGC----------------CCGGTG-TCATAACGCCCGTGGGC-------------------GTTATGACACACT----------CAAAAGTGTCATAGGGCCCGTGGGCCTTATGACA-----------CACTTCAAAGTGTCA----------------------SizeHit CountTotal NormTotal
No Reads
droEug1
AC------AATT------GCTCCACAACACCTGGAGCCACATTTTGCCAG----------------CTGGCG-TTAAGAAGGTCGTGCGCACAAGAGCTCCACGCTGGAGGCATAGCGCACTATGACATCCAGCACAGCGATCTACACCCAG--------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
AA------AACT------GCTCCGAATCACCGAGAGCCACATTCTGCCGC----------------CTAGCT-TCAGAGAGTTCGTGCGCCAAAGAACTGCACGCCGGTGGGGTAGCACACTGCCGAGTACAAGAGAGTGACCTGCATCTG---------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................AGAGTTCGTGCGCCAAAGAA.....................................................................................................................2010203.202032000000000000000000000000000000000000000010110001010020000020000000000000000000122000000000000000000000000000000000000000000000000000000000000000020331100020000000000000000000000000000000000010000000000000200210000040040000000000000000000000000000000000000000000000000011121615121216950000000000000003312060209010000000000000300000000000900000
................................................................................................ACTGCACGCCGGTGGGGTAGC.................................................................................................2111161.2717740000000000000000000000001000000000003302100000213002410000000000000000000000002010000000000000100000000000000000000000000000000000000000000001000715101326100100000000000000000000000000000000031250000040000041000000000121012013010010000000000000000000000000000000000000000000359280214630400000000010000052134112380050000455000000140001000000019400002
................................................................................................................................TACAAGAGAGTGACCTGCATC.................................................................2113154.002002000000000000000000000000000000000000371200410023241499000000000000000000000000220100000000000000010000000000000000000000000000000000000000000100001413139213000100000000000000000000000000000000001002500100000000060458000004303401101020000000000000000000000000000000000000000000001467560151210000010001000040331189428808000031300000006000000010112800000
.............................................................................AGAGTTCGTGCGCCAAAGAAC....................................................................................................................2110133.9013390000000000000000000000000000000000003200002100220116100000100000000000000000010119900000000000000010000000000000000000000000000000003200000002000000566340041000000000000000000000000000000000112600010022100212100600001630141211724843380000000000000000000000000000000000000000001090527011394000000000000000430532060600002500000100000100000002100000
............................................................................................AAGAACTGCACGCCGGTGGGG.....................................................................................................2111129.8214280000000000000000000000000000000000001070050440110997681310000100000000000000000011100000000000000000000000000000000000000000000000000011000000200000175121412032703100000000000000000000000000000000001225610031160000001004130000012481347115512213200000000000100000000000000000000000000000000371400010930000000000000207355723504000027010000090010000102015600000
...............................................................................................AACTGCACGCCGGTGGGGTAG..................................................................................................2111118.821307000000000000000000000000000000000000411220300025102201000210000000000000000007832000000000000000000000000000000000000000000000000000000000000000026111482203100000000000000000000000000000000120340000001200000110833100000361144429371830000000000000000000000000000000000000101001235165001614900000000000002027687528201300001122002000020000000000013200000
...................................................................TAGCT-TCAGAGAGTTCGTGCG.............................................................................................................................2114118.0016520000000000000000000000000000000000011201000000021426200000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000210514000000000000000000000000000000000000001260000012000000100000000082111003120000000000000000000000000000000000000000000000049335037662800000000000000034160661700000000000000003000000000004100000
.................................................................................TTCGTGCGCCAAAGAACTGCA................................................................................................................2110117.40117400000000000000000000000000000000000011001022001113131000011000000000000000000426000000000000000000000000000000000000000000000000000000000000000003851411200600000000000000001000000000000000003011000000000000201000000011511611871109200000000000000000000000000000000000001000001763030173389000000000000000227613450000000100000000000000000001100000
.......................................................................................................................ACTGCCGAGTACAAGAGAGTG..........................................................................2113112.15145800000000000000000000000000000000000010000010100100101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002123010000000000000000000000000000000000000000000000000000000000000002203000000000000000000000000000000000000000000000000001016127011710200000000000000039732247300000000301000004000000000009800000
..............................................................................................................................AGTACAAGAGAGTGACCTGCA...................................................................2113102.1513280000000000000000000000000000000000000000000100010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111301000000000000000000000000000000000000000000000000000000000000000300100000000000000000000000000000000000000000000000000116036400118800000000000001011541335380100000000000003000000000004800000
........................AATCACCGAGAGCCACATTCT.........................................................................................................................................................................2115101.2715190000000000000000000000000000000000004211001100271301210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000710952830580000000000000000000000000000000002021400000000000010141000003205603162600000000000000000000000000000000000000000000010270101252150000000000000002387311520500003000000003000000000002800000
.........................ATCACCGAGAGCCACATTCTG........................................................................................................................................................................211598.40147600000000000000000000000000000000000020001021001512020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000211021000000000000000000000000000000000000002200000000000010000000001002315111400000000000000000000000000000000000000000002131341014441900000000000001035135702810300001200000006000000000005500000
...........................................................................AGAGAGTTCGTGCGCCAAAG.......................................................................................................................201595.8014370000000000000000000000000000000000000000000000000001000000000000000000000000011010000000000000000000000000000000000000000000000000000000000000000210013000000000000000000000000000000000000000100000000000000000000000300010200021000000000000000000000000000000000000000000018038212976050000000000000102210618660300000100000000000000000003100000
..........................................................................................................................GCCGAGTACAAGAGAGTGACC.......................................................................211391.8511940000000000000000000000000000000000000000000000000000000000000000000000000000012100000000000000000000000000000000000000000000000000000000000000000100321000000000000000000000000000000000000000040010000000000010000000000000010000000000000000000000000000000000000000010000004424701703410000000000000002481682580100000220000000000000000003600000
......................................................................................................................CACTGCCGAGTACAAGAGAGT...........................................................................211390.92118200000000000000000000000000000000000035105001002920264100000000000000000000000201000000000000000000000000000000000000000000000000000000000000100002238173151940130000000000000000000000000000000003102400000200000001501333000002660311063100103000000000100000000000000000000000000000000106923001138300000000000000072779183013000027001000126001100000007300000
.........................................................................................................................TGCCGAGTACAAGAGAGTGAC........................................................................211388.4611500000000000000000000000000000000000001100000000000000000002000000000000000000051110000000000000000000000000000000000000000000000000000000000000000100002001000000000000000000000000000000000010080000000000000000000000510030011000000000000001000000000000000000000000020000008132100352070000000000000003373971860100000100000002001000000007300000
.............................................................................................AGAACTGCACGCCGGTGGGGT....................................................................................................211186.18948000000000000000000000000000000000000212120600024601050000000000000000000000000201000000000000000000000000000000000000000000000000000000000000000018293021917601030000000000000000000000000000000001041400001000000040010000005131220042303200000000000000000000000000000010000000010001207600245000000000000010123273275027000011400100007000000002106000002
..............................................................................................GAACTGCACGCCGGTGGGGTA...................................................................................................211185.64942000000000000000000000000000000000000143110111025210330000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000052514219202070000000000000000000000000000000000215440003019000000500010000035412100410111000000000000000000000000000000000000010000003180022200000000000000011357925502400008580000002110000000100013000000
...............................................CGC----------------CTAGCT-TCAGAGAGTTCG.................................................................................................................................211484.0011760000000000000000000000000000000000000122000000142555400000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000110983001000000000000000000000000000000000001173500000320000006122100000941820433010000000000001000000000000000000000000000000006323200166400000000000000011339922900000002000000080000000000023000000
...........................................................................................AAAGAACTGCACGCCGGTGGG......................................................................................................211179.45874000000000000000000000000000000000000360021140013220430000000000000000000000002101000000000000000000000000000000000000000000000000000000001004000052535417204000000000000000000000000000000000010122100000000000100500000059401240805010000000000000300000000000000000000000001000000441760041174000000000000000164623620500000300000004000000000003700000
........................................................................................................................CTGCCGAGTACAAGAGAGTGA.........................................................................211376.31992000000000000000000000000100000000000120210010010100140000301000000000000000002010000000000000000000000000000000000000000000000000010000000000000072410172101041000000000000000000010000000000000102100001000000088135214900039401251815260000000000000000000000000000000000000010000001488006600000000000000001145933090601003401100007000000000109400000
..................................................................CTAGCT-TCAGAGAGTTCGTGC..............................................................................................................................211470.2198300000000000000000000000000000000000014217791001082292116451750000000000000000000000011200000000000000000000000000000000000000000000000000010000000003000921158293901200000000000000000000000000000000001125430000016000001136151000005380374091904102000000000000000000000010010000000004010000120013000000000000030411216000000180000000270030000013228500000
................................................GC----------------CTAGCT-TCAGAGAGTTCGT................................................................................................................................211462.79879000000000000000000000000000000000000140100000026023320000010000000000000000001000000000000000000000000000000000000000000000000000000000000000000003044700000000000000000000000000000000000000007000000000005100000000060029101030000000000000000000000000001000000000000000000084201625000000000000000281359330110000002000000090000000000112900000
.............................................................................................................................GAGTACAAGAGAGTGACCTGC....................................................................211361.698020000000000000000000000000000000000001121001100350114000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000551461200900000000000000000000000000000000002005000000000000200100000060020010000000000000000000000000000000000000000002010000230006330000000000000802276104355010000001600000009000000000004500000
......................CGAATCACCGAGAGCCACATT...........................................................................................................................................................................211558.67880000000000000000000000000000000000000000010030000001000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000102010200040000000000000000000000000000000000000000000000000000000000041002030808300000000000000000000000000000000000000000000783081037214000000000000000114129780300000100000001000000000003200000
...........................................................................AGAGAGTTCGTGCGCCAAAGA......................................................................................................................211557.408610000000000000000000000000000000000000100000000021220100000000000000000000000033140000000000000000000000000000001000000000000000000200000000100000152710000100000000000000000000000000000000000120000000000001002000000600010134811000000000000000000000000000000000000000000000056361012913300000000000000022030890400001700000002000000000003600000
.......................................................................T-TCAGAGAGTTCGTGCGCCAAAGAAC....................................................................................................................26955.444990000000000000000000000000000000000000010000000100000000000000000000000000000001000000000000000000000000000000000000000000000000000003011000200000100010100000000000000000000000000000000000000300100032039165541010302131100000014305332953811000000000000000000000000000000000000000000000000000000000002000000110000000014000000000000000000500000
..........................................................................CAGAGAGTTCGTGCGCCAAA........................................................................................................................201548.277240000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000005350084489000000000000000217059000000010000000000000000000400000
............................ACCGAGAGCCACATTCTGCCG.....................................................................................................................................................................211547.877180000000000000000000000000000000000001000002000013120100000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000120553000000000000000000000000000000000000022180000110000003000000000400460114301200000000000000000000000000000000000000000000146101211350000000000000009284117601000003010000020000000000014300000
............................................TGCCGC----------------CTAGCT-TCAGAGAGT....................................................................................................................................211445.57638000000000000000000000000100000000000550180010011554830000110000000000000000000210000000000000000000000000000000000000000000000000010000000000000078151400000000000000000000000000000000000000061900002500000070303000001410161020101000000000000000000000000000000000000001000000157200241420000000000000001834304400000000102000017001100000007500000
....................................................................................................................CACACTGCCGAGTACAAGAGA.............................................................................211343.855700000000000000000000000000000000000001000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200110009000000000000000000000000000000000000000000000000000000000000100000001002000000000000000000000000000000000000000000004519500941000000000000000521491170000001000000000000000000006800000
.................................................................................................................TAGCACACTGCCGAGTACAAG................................................................................211339.465130000000000000000000000000000000000000201000000101103000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000100000000000000000000000000000000000030000000000001000000000000230111106100000000000000000000000000000000000000000000231851119178000000000000000424627000000000000000000000000000500000
.......................................................................T-TCAGAGAGTTCGTGCGCCAA.........................................................................................................................211438.2153500000000000000000000000000000000000000000000000022011000000000000000000000000210100000000000000000000000000000000000000000000000000000000000001001104000000000000000000000000000000000000000302600000300000020020000000007000000000000000000000000000000000000000000000000000034162003815900000000000000051712310000001100000003000000000003000000
AA------AACT------GCTCCGAATCACCGA.....................................................................................................................................................................................211536.875530000000000000000000000000000000000000000003000000021000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021211000000000000000000000000000000000000000000000000000000000000000300100117091000000000000000000000000000000000000010000006834703942000000000000000515718000000010000000000000000000100000
.........................................................................TCAGAGAGTTCGTGCGCCAAA........................................................................................................................211533.3350000000000000000000000000000000000000011010013001100130000010000000000000000000341000000000000000000000000000000000000000000000000000000000000000003933010000000000000000000000000000000000000021300000050000022900000000200400000000000000000000000000000000000000000000000000003412700105800000000000000031137740500000200000001100000000003900000
............................................................................GAGAGTTCGTGCGCCAAAGAA.....................................................................................................................211033.3033300000000000000000000000000000000000000000000004000001000000100000000000000000010000000000000000000000000000000000000000000000000000000000000000000307101000000000000000000000000000000000000001300000000000022001000000101011010100000000000000000000000000000000000000000000084100390000000000000003844169010000040000000200000000000700000
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.............................................................................................................................GAGTACAAGAGAGTGACCTGCA...................................................................22134.1554000000000000000000000000000000000000000000000000000010000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000212000000000000000000002623010000110000000000000000000200000
.........................................TTCTGCCGC----------------CTAGCT-TCAGAGA......................................................................................................................................22144.145800000000000000000000000000000000000000002000000000110000000000000000000000000010102000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000101020300000000000000000000000000000000000000000000044003210000000000000002601000000000000000000000000000100000
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........................................................................................GCCAAAGAACTGCACGCCGGTGGGGTA...................................................................................................27114.00440000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101001000000000000000000000000000000000000000000200000200000040295000101000100010000000000000000000000000000000000000000000000000000000000001000001102000000202000000000000000110100000
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.........................ATCACCGAGAGCCACATTCTGCCGC----------------....................................................................................................................................................25153.93590000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000003003200000000000000000000000000000000000000100000000000001000047000300500000090000000000000000000000000000000000000000000000000000000000000000002103000000129000000000000001000000000
......................................................................................................................CACTGCCGAGTACAAGAGAGTG..........................................................................22133.855000000000000000000000000000000000000001100000001001000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000001110000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000000001400110000000000000000179000000000000000000000000000700000
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........................................ATTCTGCCGC----------------CTAGCT-TCAGA........................................................................................................................................21143.715200000000000000000000000000000000000000000000000000022000000000000000000000000200300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004001004000300000000000000000000000000000000000000000000017001800000000000000021200000000000000000000000000000000000
..........................................................................................................................GCCGAGTACAAGAGAGTGACCTGCA...................................................................25133.694800000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100400000000000000000000000000000000000002000000500000000101914000000100000000000000000000000000000000000000000000000000000000000000000001000000010010000102000000000000002000000000
....................TCCGAATCACCGAGAGCCACATTC..........................................................................................................................................................................24153.67550000000000000000000000000000000000000000000020100000000000000000000000000000000000200000000000000000000000002000100000000000000000000000000001120121100000200000000000000000000000000000000000000002000000000000104000102010201120000000000000000000000000000000000000000000000000000000000000000003022000000221000000000000001310200000
..........................................TCTGCCGC----------------CTAGCT-TCAGAGAGTTCG.................................................................................................................................26143.57500000000000000000000000000000000000000000101000100010000001110000000000000000000000000000000000000000000000000000000000000000000000000000000000100101000000000000000000000000000000000000000000100000030000000400064000901200100000000000000000000000000000000000000000000000000000000000000000000000001000000200000000000000001120200000
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...............................................................................AGTTCGTGCGCCAAAGAACTGC.................................................................................................................22103.50350000000000000000000000000000000000000000000000010010100000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000100000000000000000000000000002900160000000000000000513000000000000000000000000000000000
..........................................................................CAGAGAGTTCGTGCGCCAAAGAACT...................................................................................................................25103.50350000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001050011010000000000000000000000000000000000000010000100000000000000060000001200000210000000000000000000000000000000000000000000000000000000000001000000210000000000000000000000000512000000
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...........................................................................................AAAGAACTGCACGCCGGTGGGGT....................................................................................................23113.45380000000000000000000000000000000000000100000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100010000000000000000000000000000000000000001000000000000000000000200002100110000000000000000000000000000000000000000000004900000000000000000001403000000020000000000000000001100000
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..................................................................................................................AGCACACTGCCGAGTACAAGAG..............................................................................22133.38440000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000020500260000000000000004407000000000000000200000000000800000
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......................CGAATCACCGAGAGCCACATTC..........................................................................................................................................................................22153.335000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000100000000000000010000000000000100000100000000000000000000000000000000000000000000181700170000000000000000124010000000000000000000000000100000
...................................................................................................GCACGCCGGTGGGGTAGCAC...............................................................................................20163.3153000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000111005240000000000000000612000000000000000100000000000000000
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..............................CGAGAGCCACATTCTGCCGC----------------CT..................................................................................................................................................22153.27490000000000000000000000000000000000000010100000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011101003000000000000000000000000000000000000040000020000000000000000500100000000000000000000000000000000000000000000000000020000240000000000000000135010000000000000000100000000700000
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...................CTCCGAATCACCGAGAGCCACA.............................................................................................................................................................................22153.134700000000000000000000000000000000000000000000000220010000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000101000000300000000000000000001000000000000000000000000000000000000000000000000000045000300000000000000025210010000000000000000000000000200000
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...........................................................................................AAAGAACTGCACGCCGGTGGGGTA...................................................................................................24113.09340000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070100000030000000000000000000000000000000000000000200070000100010120000101110100010000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000
........................................................................................................................CTGCCGAGTACAAGAGAGTGAA........................................................................22133.084000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000017000200000000000000000721000000000000000100000000000000000
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....................TCCGAATCACCGAGAGCCACAT............................................................................................................................................................................22152.33350000000000000000000000000000000000000000000000001002200000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000100000000000000000000000000010203040000000000000000000000000000000000000000000010100030000000000000000102010000010000000000000000000400000
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.......................GAATCACCGAGAGCCACATTCT.........................................................................................................................................................................22152.203300000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000041600170000000000000000301000000000000000000000000000000000
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droSim2
AA------AACT------GCACCCCAACACCGGGAGCTACCTTTTGCCAA----------------CTATCA-ACGGAAAGCTCATGCGCCAGGGAACTACACGCAGGCGTTCTAGCGTATTGTGAGTCACAACCAAGCGACCTACACCCGC----------------TTACCCGCGTG-----------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................TATCA-ACGGAAAGCTCATGCGCC...........................................................................................................................23629.17175046110002140151113000000
................................................AA----------------CTATCA-ACGGAAAGCTCATGCGCC...........................................................................................................................26619.831190010009702100000000
....................................................................ATCA-ACGGAAAGCTCATGCGCCAGGGA......................................................................................................................27617.3310400000048282161000000
................................................AA----------------CTATCA-ACGGAAAGCTCATGCGC............................................................................................................................25815.381230000007914120000000
...................................................................TATCA-ACGGAAAGCTCATGCGCCAG.........................................................................................................................25611.0066000700142547000000
...................................................................TATCA-ACGGAAAGCTCATGCGCCA..........................................................................................................................24610.336200011130365220011000
...................................................................TATCA-ACGGAAAGCTCATGCGC............................................................................................................................2289.0072001300132821212010000
................................................AA----------------CTATCA-ACGGAAAGCTCATGC..............................................................................................................................2387.88630000003902130000000
................................................AA----------------CTATCA-ACGGAAAGCTCATGCG.............................................................................................................................2487.50600000003602400000000
....................................................................ATCA-ACGGAAAGCTCATGCGCCAGGGAAC....................................................................................................................2966.67400000002312401000000
....................................................................ATCA-ACGGAAAGCTCATGCGCCAGGG.......................................................................................................................2666.50390010001431046010000
....................................................................ATCA-ACGGAAAGCTCATGCGCCAG.........................................................................................................................2463.832300030022425050000
..............................................CCAA----------------CTATCA-ACGGAAAGCTCATGC..............................................................................................................................2582.6321000000113111040000
..............................................CCAA----------------CTATCA-ACGGAAAGCTCATGCGCC...........................................................................................................................2862.1713000000013000000000
................................................AA----------------CTATCA-ACGGAAAGCTCATGCGCCA..........................................................................................................................2762.1713000000110200000000
...................................................................TATCA-ACGGAAAGCTCATGCGCCAGG........................................................................................................................2662.001200020023014000000
...........................................................................................AGGGAACTACACGCAGGCGTTCTAGCGTA..............................................................................................2912.00200000000000020000
...................................................................TATCA-ACGGAAAGCTCATGC..............................................................................................................................2082.0016000001400011000000
...................................................................TATCA-ACGGAAAGCTCATG...............................................................................................................................1982.0016000014000002000000
....................................................................ATCA-ACGGAAAGCTCATGCGCCAGG........................................................................................................................2561.831100030020501000000
..............................................CCAA----------------CTATCA-ACGGAAAGCTCATG...............................................................................................................................2481.751400000008030030000
...................................................................TATCA-ACGGAAAGCTCATGCG.............................................................................................................................2181.751400000015332000000
....................................................................ATCA-ACGGAAAGCTCATGCGCC...........................................................................................................................2261.671000100011610000000
................................................AA----------------CTATCA-ACGGAAAGCTCATGCGT............................................................................................................................2581.631300000090400000000
....................................................................ATCA-ACGGAAAGCTCATGCGC............................................................................................................................2181.6313000000211000000000
..............................................CCAA----------------CTATCA-ACGGAAAG.....................................................................................................................................18111.5517000017000000000000
..........................................TTTGCCAA----------------CTATCA-ACGGAAA......................................................................................................................................21101.5015000015000000000000
....................................................................................................................................ACCAAGCGACCTACACCCGC----------------TTACCCGC......................................2861.50900000900000000000
....................................................................ATCA-ACGGAAAGCTCATGCGCCAGGGAT.....................................................................................................................2861.33800000051200000000
....................................................................ATCA-ACGGAAAGCTCATGCGCCA..........................................................................................................................2361.17700000031120000000
...................................................................TATCA-ACGGAAAGCTCATGCGCCT..........................................................................................................................2481.13900700000101000000
...................................................................TATCA-ACGGAAAGCTCATGCGCCAGGG.......................................................................................................................2761.00600100003101000000
..............................................CCAA----------------CTATCA-ACGGAAAGCTCAT................................................................................................................................2380.88700000005000020000
...................................................................TATCA-ACGGAAAGCTCATGCGCCAGGGA......................................................................................................................2860.83500000003101000000
..............................................CCAA----------------CTATCA-ACGGAAAGCTCATGCGC............................................................................................................................2780.75600000006000000000
................................................AA----------------CTATCA-ACGGAAAGCTCATG...............................................................................................................................2280.75600000030210000000
....................................................................ATCA-ACGGAAAGCTCATGCGCCAGGGAA.....................................................................................................................2860.67400000021100000000
....................................................................ATCA-ACGGAAAGCTCATGCGCCAGGT.......................................................................................................................2660.67400000011110000000
..............................................CCAA----------------CTATCA-ACGGAAAGCTCATGCG.............................................................................................................................2680.50400000004000000000
...................................................................TATCA-ACGGAAAGCTCATGCGCCAT.........................................................................................................................2560.50300000001002000000
...................................................................TATCA-ACGGAAAGCTCATGCGCCAGA........................................................................................................................2660.50300010000001010000
.................................................A----------------CTATCA-ACGGAAAGCTCATGCGCC...........................................................................................................................2560.50300000030000000000
....................................................................ATCA-ACGGAAAGCTCATGCGCCAGGGAAT....................................................................................................................2970.43300000030000000000
.....................................................................................TGCGCCAGGGAACTACACGCAGGCG........................................................................................................2550.40200000000002000000
..............................................................................AAGCTCATGCGCCAGGGAACTACACGC.............................................................................................................2750.40200000001010000000
...................................................................TATCA-ACGGAAAGCTCATGCGT............................................................................................................................2280.38300000010101000000
.................................................A----------------CTATCA-ACGGAAAGCTCATGCGC............................................................................................................................2480.38300000020100000000
................................................AA----------------CTATCA-ACGGAAAGCTCATGCGCCT..........................................................................................................................2780.38300000010200000000
.....................................................................................TGCGCCAGGGAACTACACGCAGGCGTTC.....................................................................................................2830.33100000000001000000
...........T------GCACCCCAACACCGGGAG..................................................................................................................................................................................1930.33100000000001000000
.....................................................................TCA-ACGGAAAGCTCATGCGCCAGGGAA.....................................................................................................................2760.33200000020000000000
............................................................................GAAAGCTCATGCGCCAG.........................................................................................................................1790.33300000000003000000
....................................................................ATCA-ACGGAAAGCTCATGCGCCAGGGC......................................................................................................................2760.33200000010100000000
....................................................................ATCA-ACGGAAAGCTCATGCGCCAGGGTT.....................................................................................................................2860.33200000020000000000
...............................................CAA----------------CTATCA-ACGGAAAGCTCATGCGCC...........................................................................................................................2760.33200010001000000000
...................................................................TATCA-ACGGAAAGCTCATGCGCCAGGGAAC....................................................................................................................3060.33200000011000000000
.........................AACACCGGGAGCTACCTTTTGCCAA----------------C...................................................................................................................................................2630.33100000000001000000
.....................................................................TCA-ACGGAAAGCTCATGCGCCAGGGA......................................................................................................................2660.33200000011000000000
...................................................................TATCA-ACGGAAAGCTCATGCGCCAGGGAAA....................................................................................................................3060.33200000011000000000
.........ACT------GCACCCCAACACCGGGAGCTACCT............................................................................................................................................................................2730.33100000000001000000
...................................................................TATCA-ACGGAAAGCTCATGCGCCAGT........................................................................................................................2660.33200000001001000000
.................................................A----------------CTATCA-ACGGAAAGCTCATGCG.............................................................................................................................2380.25200000020000000000
..............................................CCAA----------------CTATCA-ACGGAAAGCTCATGCGCT...........................................................................................................................2880.25200000002000000000
....................................................................................ATGCGCCAGGGAACTACACGCAGGC.........................................................................................................2540.25100000000001000000
.....................................................................TCA-ACGGAAAGCTCATGCGC............................................................................................................................2080.25200000020000000000
.............................................................................AAAGCTCATGCGCCA..........................................................................................................................1590.22200000000002000000
..............................................................................AAGCTCATGCGCCAG.........................................................................................................................1590.22200000000002000000
...........................................................................................AGGGAACTACACGCAGGCGTTCTAG..................................................................................................2550.20100000000000010000
.....................................................................................TGCGCCAGGGAACTACACGCAGG..........................................................................................................2350.20100000000000010000
......................................................................................................................................CAAGCGACCTACACCCGC----------------TTACCCGCGA....................................2850.20100000001000000000
..............................................CCAA----------------CTATCA-ACGGAAAGCTC..................................................................................................................................21100.20200000000000011000
...................................................................TATCA-ACGGAAAGCT...................................................................................................................................15110.18200000000002000000
......................................................................CA-ACGGAAAGCTCATGCGCCAG.........................................................................................................................2260.17100000000000001000
...................................................................TATCA-ACGGAAAGCTCATGCGCCAGGGAA.....................................................................................................................2960.17100000001000000000
.......................................................................A-ACGGAAAGCTCATGCGCCAGGGAAC....................................................................................................................2660.17100000010000000000
.....................................................................TCA-ACGGAAAGCTCATGCGCC...........................................................................................................................2160.17100000000100000000
.....................................................................TCA-ACGGAAAGCTCATGCGCCAGGGAAC....................................................................................................................2860.17100000000010000000
.......................................................................A-ACGGAAAGCTCATGCGCCAGG........................................................................................................................2260.17100000000001000000
................................................AA----------------CTATCA-ACGGAAAGCTCATGCGCCAGGGA......................................................................................................................3160.17100000010000000000
.........................................................................ACGGAAAGCTCATGCGCCAGG........................................................................................................................2160.17100000000000010000
...................................................................TATCA-ACGGAAAGCTCATGCGCCAGGGG......................................................................................................................2860.17100100000000000000
....................................................................ATCA-ACGGAAAGCTCATGCGCCAGGA.......................................................................................................................2660.17100000010000000000
.........................................................................ACGGAAAGCTCATGCGCCAGGGAA.....................................................................................................................2460.17100100000000000000
......................................................................CA-ACGGAAAGCTCATGCGCCAGGG.......................................................................................................................2460.17100000000000001000
.............................................................................AAAGCTCATGCGCCAGGGAAC....................................................................................................................2160.17100000000001000000
....................................................................ATCA-ACGGAAAGCTCATGCGCCAGGGG......................................................................................................................2760.17100100000000000000
.......................................................................A-ACGGAAAGCTCATGCGCCAG.........................................................................................................................2160.17100000000001000000
.......................................................................A-ACGGAAAGCTCATGCGCC...........................................................................................................................1960.17100000000001000000
.....................................................................TCA-ACGGAAAGCTCATGCGCCAA.........................................................................................................................2360.17100000000000010000
.................................................A----------------CTATCA-ACGGAAAGCTCATGCGCCC..........................................................................................................................2660.17100000010000000000
...................................................................TATCA-ACGGAAAGCTCATGCGCCAGC........................................................................................................................2660.17100000001000000000
............................................TGCCAA----------------CTATCA-ACGGAAAGCTCATGCGCC...........................................................................................................................3060.17100000000010000000
.................................................A----------------CTATCA-ACGGAAAGCTCATGCGCCA..........................................................................................................................2660.17100000010000000000
.....................................................................TCA-ACGGAAAGCTCATGCGCCAGGGAT.....................................................................................................................2760.17100000010000000000
....................................................................ATCA-ACGGAAAGCTCATGCGCCAGGGAC.....................................................................................................................2860.17100000010000000000
.................................................................................CTCATGCGCCAGGGAACTACACGCA............................................................................................................2560.17100000000001000000
..............................................CCAA----------------CTATCA-ACGGAAAGCTCATGCGCCA..........................................................................................................................2960.17100000001000000000
....................................................................ATCA-ACGGAAAGCTCATGCGCCAGTT.......................................................................................................................2660.17100000000100000000
.........................................................................................CCAGGGAACTACACGCAGGCG........................................................................................................2170.14100000000000001000
.......................................................................................CGCCAGGGAACTACACGCAGGC.........................................................................................................2270.14100000000000010000
............................................................................GAAAGCTCATGCGCCAGG........................................................................................................................1870.14100000000001000000
..........................................................................................CAGGGAACTACACGCAGGCGT.......................................................................................................2170.14100000000000010000
..............................................CCAA----------------CTATCA-ACGGAAAGCTCATGCGCCT..........................................................................................................................2980.13100000001000000000
..............................................CCAA----------------CTATCA-ACGGAAAGCTCATGT..............................................................................................................................2580.13100000000000010000
.....................................TACCTTTTGCCAA----------------CTATCA-ACGGAA.......................................................................................................................................2580.13100000000010000000
................................................AA----------------CTATCA-ACGGAAAGCTCATGCGCT...........................................................................................................................2680.13100000000100000000
.....................................................................TCA-ACGGAAAGCTCATGCG.............................................................................................................................1980.13100000000001000000
.............................................GCCAA----------------CTATCA-ACGGAAAGCTCATGCGC............................................................................................................................2880.13100000000001000000
....................................................................ATCA-ACGGAAAGCTCATGC..............................................................................................................................1980.13100000010000000000
..............................................CCAA----------------CTATCA-ACGGAAAGCTCATA...............................................................................................................................2480.13100000100000000000
....................................CTACCTTTTGCCAA----------------CTATCA-ACGGA........................................................................................................................................2580.13100000001000000000
..................................................................CTATCA-ACGGAAAGCTCATGC..............................................................................................................................2180.13100000010000000000
..............................................CCAA----------------CTATCA-ACGGAAAGCTCATGCGT............................................................................................................................2780.13100000001000000000
....................................................................ATCA-ACGGAAAGCTCAT................................................................................................................................1780.13100000001000000000
....................................................................ATCA-ACGGAAAGCTCATGCGCCT..........................................................................................................................2380.13100000010000000000
...............................................CAA----------------CTATCA-ACGGAAAGCTCATGCGC............................................................................................................................2680.13100000000010000000
............................................................................GAAAGCTCATGCGCCA..........................................................................................................................1690.11100000000001000000
.............................................................................AAAGCTCATGCGCCAG.........................................................................................................................1690.11100000000001000000
.......................................................................................CGCCAGGGAACTACACGCA............................................................................................................1990.11100000000001000000
.............................................................................................................................AGTCACAACCAAGCGACCTACACCC................................................................25100.10100000000001000000
.................................................................................................................................ACAACCAAGCGACCTA.....................................................................16100.10100000000001000000
...........................................TTGCCAA----------------CTATCA-ACGGAAAGCTCA.................................................................................................................................25100.10100000000001000000
.................................................................................................................................ACAACCAAGCGACCTAC....................................................................17100.10100000000001000000
..............................................CCAA----------------CTATCA-ACGGAAAGCTCAA................................................................................................................................23100.10100000000000010000
..............................................CCAA----------------CTATCA-ACGGAAAGCTCA.................................................................................................................................22100.10100000000000010000
...................................................................TATCA-ACGGAAAGCTCA.................................................................................................................................17100.10100000000001000000
................................................AA----------------CTATCA-ACGGAAAGCTCA.................................................................................................................................20100.10100000000001000000
.................................................................................................................................ACAACCAAGCGACCT......................................................................15110.09100000000001000000
...................................................................................................................................AACCAAGCGACCTACACCCGC----------------TTAC..........................................25110.09100010000000000000
..................................................................................................................................CAACCAAGCGACCTACACCCGC----------------TTAC..........................................26110.09100010000000000000
.....................................TACCTTTTGCCAA----------------CTATCA-ACG..........................................................................................................................................22110.09100000000000010000
............................................TGCCAA----------------CTATCA-ACGGAAAGC....................................................................................................................................21110.09100000000010000000
..................................................................................................................................CAACCAAGCGACCTACACCCG...............................................................21150.07100010000000000000
droSec2
AA------GATT------GCACCCCGACACCGTGGGCTACCTTTTGCCAA----------------CTATCA-ATGGACAGCTCATGCGCCAGGGAACTACACGCAGGCGTCCTAGCGCATTGTGAGTCGCAACCAAGCGACCTACACCCGC----------------TTACCCGCGTG-----------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........................................TTGCCAA----------------CTATCA-ATGGACAGCTCA.................................................................................................................................2513.0032010
..........TT------GCACCCCGACACCGTGGGCTACC.............................................................................................................................................................................2520.5011000
............................................................................................GGGAACTACACGCAGGCGTCCTAGC.................................................................................................25190.3776010
............................................................................................GGGAACTACACGCAGGCGTCCTAGCGC...............................................................................................27190.3266000
............................................................................................GGGAACTACACGCAGGCGTCCTAG..................................................................................................24190.1633000
............................................................................................GGGAACTACACGCAGGCGTCCTAGCG................................................................................................26190.1122000
.....................................................................................TGCGCCAGGGAACTACACGCAGGCG........................................................................................................25200.1021100
..................................................................................TCATGCGCCAGGGAACTACACGCA............................................................................................................24200.1022000
...................................................................................................................................AACCAAGCGACCTACACCCGC----------------TTACCC........................................27160.0611000
............................................................................................................CGTCCTAGCGCATTGTGAGTCG....................................................................................22180.0611000
.........................................................................................................AGGCGTCCTAGCGCATTGTGAGTCGC...................................................................................26180.0610010
..........................................................................................................GGCGTCCTAGCGCATTGTGAGTCGCA..................................................................................26180.0611000
............................................................................................GGGAACTACACGCAGGCGTCCT....................................................................................................22190.0511000
.............................................................................................GGAACTACACGCAGGCGTCCTAGC.................................................................................................24200.0511000
...............................................................................AGCTCATGCGCCAGGGAACTACACGCA............................................................................................................27200.0510010
.........................................................................................CCAGGGAACTACACGCAGGCG........................................................................................................21200.0510010
..................................................................................................TACACGCAGGCGTCCTAGC.................................................................................................19200.0511000
.....................................................................................TGCGCCAGGGAACTACACGCAGGCGT.......................................................................................................26200.0510010
droYak3
AA------AACT------GCTCCGAATCACCGAGAGCCACATTCTGCCGC----------------CTAGCT-TCAGAGAGTTCGTGCGCCAAAGAACTGCACGCCGGTGGGGTAGCACACTGCCGAGTACAAGAAAGTGACCTGCATCCGA----------------TAG-------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................................................................................................GCCGAGTACAAGAAAGTGACCTGC....................................................................24200.40808000000000
.....................................................................GCT-TCAGAGAGTTCGTGCGCCAAAGAAC....................................................................................................................28200.20402200000000
................................................GC----------------CTAGCT-TCAGAGAGTTCGTGCGCC...........................................................................................................................26200.15302100000000
..........................................................................................................................GCCGAGTACAAGAAAGTGACCTGCATC.................................................................27200.15302100000000
...........................................................................................................................CCGAGTACAAGAAAGTGACCTGCA...................................................................24200.10202000000000
..........................................................................................................................GCCGAGTACAAGAAAGTGACCTG.....................................................................23200.10202000000000
............................................TGCCGC----------------CTAGCT-TCAGAGAGTTCGTG...............................................................................................................................26200.10201000010000
.........................................................................TCAGAGAGTTCGTGCGCCAAAGAAC....................................................................................................................25200.10202000000000
.....................................................................................TGCGCCAAAGAACTGCACGCCGGTGG.......................................................................................................26200.10202000000000
............................................TGCCGC----------------CTAGCT-TCAGAGAGTTCG.................................................................................................................................24200.10202000000000
..........................................................................................................................GCCGAGTACAAGAAAGTGACCTGCA...................................................................25200.10202000000000
.....................................................................GCT-TCAGAGAGTTCGTGCGCCAAA........................................................................................................................24200.10202000000000
.....................................................................GCT-TCAGAGAGTTCGTGCGCC...........................................................................................................................21200.10200200000000
....................TCCGAATCACCGAGAGCCACATTCT.........................................................................................................................................................................25190.05100100000000
....................TCCGAATCACCGAGAGCCACATTCC.........................................................................................................................................................................25190.05100100000000
.......................................................................................CGCCAAAGAACTGCACGCCGGTGGGG.....................................................................................................26200.05101000000000
.............................................................................................................................GAGTACAAGAAAGTGACCTGCATCCGA----------------..............................................27200.05101000000000
...............................................................................................................................GTACAAGAAAGTGACCTGCATCCGA----------------..............................................25200.05101000000000
.......................................................................................CGCCAAAGAACTGCACGCCGGTGGG......................................................................................................25200.05101000000000
.............................................GCCGC----------------CTAGCT-TCAGAGAGTTCG.................................................................................................................................23200.05101000000000
..........................................................................................................................GCCGAGTACAAGAAAGTGACC.......................................................................21200.05101000000000
.................................................C----------------CTAGCT-TCAGAGAGTTCGTGCGC............................................................................................................................24200.05101000000000
.....................................................................GCT-TCAGAGAGTTCGTGCGCCAAAG.......................................................................................................................25200.05101000000000
.........................................TTCTGCCGC----------------CTAGCT-TCAGAGAGTTCA.................................................................................................................................27200.05101000000000
............................................TGCCGC----------------CTAGCT-TCAGAGAG.....................................................................................................................................20200.05101000000000
.................................................C----------------CTAGCT-TCAGAGAGTTCGTG...............................................................................................................................21200.05100000010000
.....................................................................GCT-TCAGAGAGTTCGTGCGCCAAAGA......................................................................................................................26200.05101000000000
.........................................TTCTGCCGC----------------CTAGCT-TCAGAGAGTT...................................................................................................................................25200.05100000010000
...................................................................TAGCT-TCAGAGAGTTCGTGCGCCAAA........................................................................................................................26200.05101000000000
......................................................................CT-TCAGAGAGTTCGTGCGCCAAAG.......................................................................................................................24200.05101000000000
........................................................................................................................CTGCCGAGTACAAGAAAGTGACC.......................................................................23200.05101000000000
...................................................................TAGCT-TCAGAGAGTTCGTGCGCCAAAG.......................................................................................................................27200.05100000010000
.....................................................................GCT-TCAGAGAGTTCGTGCGCCAA.........................................................................................................................23200.05101000000000
.......................................................................................CGCCAAAGAACTGCACGCCGGTG........................................................................................................23200.05101000000000
......................................................................................................CGCCGGTGGGGTAGCACACT............................................................................................20200.05101000000000
...........................................................................AGAGAGTTCGTGCGCCAAAGAACTGCA................................................................................................................27200.05101000000000
..................................................................................................TGCACGCCGGTGGGGTAGCACACTGC..........................................................................................26200.05100100000000
..................................................................................................................................CAAGAAAGTGACCTGCATCCGA----------------..............................................22200.05101000000000
..........................TCACCGAGAGCCACATTCTGCCGC----------------CT..................................................................................................................................................26200.05100100000000
................................................GC----------------CTAGCT-TCAGAGAGTTCGTGC..............................................................................................................................23200.05101000000000
.......................................................................................CGCCAAAGAACTGCACGCCGGTGGGGT....................................................................................................27200.05100000010000
.........................ATCACCGAGAGCCACATTCTGCCGC----------------C...................................................................................................................................................26200.05101000000000
..............................................CCGC----------------CTAGCT-TCAGAGAGTTCGTG...............................................................................................................................24200.05100000010000
..........................................................................................................................GCCGAGTACAAGAAAGTGACCTGCAC..................................................................26200.05101000000000
..........................................................................................................................GCCGAGTACAAGAAAGTGACCTGCATCC................................................................28200.05101000000000
..............................................................................................................................AGTACAAGAAAGTGACCTGCATCCGA----------------..............................................26200.05101000000000
.................................................C----------------CTAGCT-TCAGAGAGTTCGTGC..............................................................................................................................22200.05101000000000
...................................................................TAGCT-TCAGAGAGTTCGTGCGCC...........................................................................................................................23200.05101000000000
....................................................................AGCT-TCAGAGAGTTCGTGCGCCA..........................................................................................................................23200.05101000000000
......................................................................................GCGCCAAAGAACTGCACGCC............................................................................................................20200.05100100000000
droEre2
AA------AACT------GCTCCGAATCACCGAGAGCCACATTCTGCCGC----------------CTAGCT-TCAGAGAGTCCGTGCGCCAAAGAACTGCACGCCGGTGGGGTAGCACACTGCCGAGTACAAGAAAGTGACCTGCATCCG---------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................................................................................AAGAACTGCACGCCGGTGGGGT....................................................................................................2292.782500000025
.....................................................................................TGCGCCAAAGAACTGCACGCCGGTGGGG.....................................................................................................2890.6760000006
..................................................................................................TGCACGCCGGTGGGGTAGCACACTGC..........................................................................................2680.2522000000
...........T------GCTCCGAATCACCGAGAGCCACA.............................................................................................................................................................................2450.2011000000
....................TCCGAATCACCGAGAGCCACATTC..........................................................................................................................................................................2450.2010001000
...........T------GCTCCGAATCACCGAGAGCCACATTC..........................................................................................................................................................................2750.2011000000
...........................................................................................................................CCGAGTACAAGAAAGTGACCTGCA...................................................................2470.1411000000
.............................................................................................................................GAGTACAAGAAAGTGACCTGCATC.................................................................2470.1411000000
.........................................................................................................................TGCCGAGTACAAGAAAGTGACCT......................................................................2370.1411000000
............................................................................................................TGGGGTAGCACACTGCCGAGTACAAG................................................................................2680.1311000000
...................................................................................................GCACGCCGGTGGGGTAGCACAC.............................................................................................2280.1311000000
.............................................................................................................GGGGTAGCACACTGCCGAGTACAAG................................................................................2580.1311000000
........................................................................................GCCAAAGAACTGCACGCCGGTGGGG.....................................................................................................2590.1111000000
........................................ATTCTGCCGC----------------CTAGCT-TCAGAGAA.....................................................................................................................................2490.1110000001
.....................................CACATTCTGCCGC----------------CTAGCT-TCAGAG.......................................................................................................................................2590.1111000000
.....................................................................................TGCGCCAAAGAACTGCACGCCGGTGG.......................................................................................................2690.1111000000
......................................................................................GCGCCAAAGAACTGCACGCCGGTGG.......................................................................................................2590.1111000000

Generated: 05/15/2015 at 02:39 PM