ID:

dpe_1702

 Coordinate:

scaffold_4598:1429-1579 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.6 -16.6 -16.6 -16.5

Flybase annnotation

CDS [Dper\GL26961-cds]; exon [dper_GLEANR_9548:1]; intron [Dper\GL26961-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AGCACATTTGGATAACTGTCATGGTCAAGGGCGTGGTCGCAACGATGGTGGTGGAGACGGAAAGTGCTACTCGGTGGGACAATTCGAGCAGGACATTGGTCCCACTTCCATGATTAAGGAAGGCTATAAGCACGGAAACGATCGTAAAGTAGGCGCTGGAGACGGCAAGCAAAACTCCATGGAGCAAATCTAGCAGCCAATTAAGAAGCCAATATAAAGACAGCCATGGTCAAGGCCCGCCACAAGCAACG
***********************************************************...((........(((((((((((((......)).)))).))))))).................))****************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V111
male body		 M042
female body
 V057
head
...........................................................GAAAGTGCTACTCGGTGGGA............................................................................................................................................................................ 20 0 1 4.00 4 4 0 0
............................................................AAAGTGCTACTCGGTGGGA............................................................................................................................................................................ 19 0 1 3.00 3 3 0 0
............................................................AAAGTGCTACTCGGTGGGAC........................................................................................................................................................................... 20 0 1 1.00 1 1 0 0
..............................................GGTGGTGGAGACGGAAAGTG......................................................................................................................................................................................... 20 0 17 1.00 17 17 0 0
...........................................................GAAAGTGCTACTCGGTGGGACA.......................................................................................................................................................................... 22 0 1 1.00 1 1 0 0
...........................................................GAAAGTGCTACTCGGTGGG............................................................................................................................................................................. 19 0 1 1.00 1 1 0 0
........................................................................................................CTTCCATGATTAAGGAAGGCT.............................................................................................................................. 21 0 1 1.00 1 1 0 0
...............................................GTGGTGGAGACGGAAAGTGCT....................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0
...........................................................GAAAGTGCTACTCGGTGGGAC........................................................................................................................................................................... 21 0 1 1.00 1 1 0 0
.............................................................AAGTGCTACTCGGTGGGAC........................................................................................................................................................................... 19 0 1 1.00 1 1 0 0
.............................................................................................................ATGATTAAGGAAGGCTATAAGC........................................................................................................................ 22 0 1 1.00 1 1 0 0
.............................................TGGTGGTGGAGACGGAAAGTG......................................................................................................................................................................................... 21 0 17 0.71 12 12 0 0
......................................................................................................................................GAAACGATCGTAAAGTAGG.................................................................................................. 19 0 12 0.58 7 7 0 0
...............................................GTGGTGGAGACGGAAAGTG......................................................................................................................................................................................... 19 0 17 0.53 9 9 0 0
............................................................AAAGTGCTACTCGGTGGGTTT.......................................................................................................................................................................... 21 3 2 0.50 1 1 0 0
...............................................................................................................................................GTAAAGTAGGCGCTGGAGACG....................................................................................... 21 0 18 0.50 9 9 0 0
.............................................................................................................................................TCGTAAAGTAGGCGCTGGAG.......................................................................................... 20 0 13 0.46 6 6 0 0
...............................................GTGGTGGAGACGGAAAGTGC........................................................................................................................................................................................ 20 0 17 0.35 6 6 0 0
...............................................................................................................................................GTAAAGTAGGCGCTGGAGAC........................................................................................ 20 0 18 0.33 6 6 0 0
................................................................................................................................................TAAAGTAGGCGCTGGAGAC........................................................................................ 19 0 18 0.33 6 6 0 0
.......................................................................................................................................AAACGATCGTAAAGTAGGC................................................................................................. 19 0 13 0.31 4 4 0 0
.............................................................................................................................................TCGTAAAGTAGGCGCTGGAGA......................................................................................... 21 0 13 0.31 4 4 0 0
..................................................................................................................................................AAGTAGGCGCTGGAGACGG...................................................................................... 19 0 17 0.29 5 5 0 0
......................................GCAACGATGGTGGTGGAGACG................................................................................................................................................................................................ 21 0 7 0.29 2 2 0 0
...............................................................................................................................................GTAAAGTAGGCGCTGGAGA......................................................................................... 19 0 18 0.28 5 5 0 0
................................................................................................................................AGCACGGAAACGATCGTAAAG...................................................................................................... 21 0 4 0.25 1 1 0 0
......................................................................................................................................GAAACGATCATAAAGTAGG.................................................................................................. 19 1 12 0.25 3 3 0 0
............................................................................................................................................ATCATAAAGTAGGCGCTGGAG.......................................................................................... 21 1 13 0.23 3 2 1 0
.......................................................................................................................................AAACGATCGTAAAGTAGGCG................................................................................................ 20 0 13 0.23 3 3 0 0
.........................................................................GTGGGACAATTCGAGCAGG............................................................................................................................................................... 19 0 18 0.22 4 4 0 0
................................................................................................................................................TAAAGTAGGCGCTGGAGACG....................................................................................... 20 0 18 0.22 4 4 0 0
........................................................................GGTGGGACAATTCGAGCAGG............................................................................................................................................................... 20 0 18 0.22 4 4 0 0
.................GTCATGGTCAAGGGCGTGGT...................................................................................................................................................................................................................... 20 0 5 0.20 1 1 0 0
........................TCAAGGGCGTGGTCGCAACGA.............................................................................................................................................................................................................. 21 0 5 0.20 1 1 0 0
.................GTCATGGTCAAGGGCGTGGTCG.................................................................................................................................................................................................................... 22 0 5 0.20 1 1 0 0
..................TCATGGTCAAGGGCGTGGTCG.................................................................................................................................................................................................................... 21 0 5 0.20 1 1 0 0
.................GTCATGGTCAAGGGCGTGGTCTC................................................................................................................................................................................................................... 23 1 5 0.20 1 1 0 0
.........................CAAGGGCGTGGTCGCAACGATA............................................................................................................................................................................................................ 22 1 11 0.18 2 2 0 0
.............................................TGGTGGTGGAGACGGAAAG........................................................................................................................................................................................... 19 0 17 0.18 3 3 0 0
.................................................................................................................................................AAAGTAGGCGCTGGAGACGG...................................................................................... 20 0 17 0.18 3 3 0 0
................................................................................................................................................TAAAGTAGGCGCTGGAGACGG...................................................................................... 21 0 17 0.18 3 3 0 0
.............................................TGGTGGTGGAGACGGAAAGT.......................................................................................................................................................................................... 20 0 17 0.18 3 3 0 0
..............................................GGTGGTGGAGACGGAAAGTGC........................................................................................................................................................................................ 21 0 17 0.18 3 3 0 0
.........................................................................GTGGGACAATTCGAGCAGGA.............................................................................................................................................................. 20 0 18 0.17 3 3 0 0
...............................................................................................................................................GTAAAGTAGACGCTGGAGACG....................................................................................... 21 1 18 0.17 3 3 0 0
...................................................................................................................................................AGTAGGCGCTGGAGACGGT..................................................................................... 19 1 18 0.17 3 3 0 0
.......................................................................CGGTGGGACAATTCGAGCAG................................................................................................................................................................ 20 0 18 0.17 3 3 0 0
..............................................................................ACAATTCGAGCAGGACATTG......................................................................................................................................................... 20 0 18 0.17 3 3 0 0
................................................TGGTGGAGACGGAAAGTGC........................................................................................................................................................................................ 19 0 18 0.17 3 3 0 0
.................................................................................................................................................AAAGTAGGCGCTGGAGACG....................................................................................... 19 0 18 0.17 3 3 0 0
......................................................................................................................................GAAACGATCGTAAAGTAGGC................................................................................................. 20 0 12 0.17 2 2 0 0
......................................................................................................................................GAAGCGATCGTAAAGTAGG.................................................................................................. 19 1 12 0.17 2 2 0 0
.......................................................................................................................................................GGCGCTGGAGACGGCAAGC................................................................................. 19 0 18 0.17 3 3 0 0
............................................................................................................................................ATCGTAAAGTAGGCGCTGGAG.......................................................................................... 21 0 13 0.15 2 2 0 0
............................................................................................................................................ATCGTAAAGTAGGCGCTGGA........................................................................................... 20 0 13 0.15 2 2 0 0
............................................................................................................................................ATCGTAAAGTAGGCGCTGG............................................................................................ 19 0 13 0.15 2 2 0 0
..............................................................................................................................................CGTAAAGTAGGCGCTGGA........................................................................................... 18 0 13 0.15 2 2 0 0
.............................................................................................................................................TCATAAAGTAGGCGCTGGA........................................................................................... 19 1 13 0.15 2 2 0 0
..................................GGTCGCAACGATGGTGGTGGA.................................................................................................................................................................................................... 21 0 7 0.14 1 1 0 0
......................................GCAACGATGGTGGTGGAGACGT............................................................................................................................................................................................... 22 1 7 0.14 1 1 0 0
................................GTGGTCGCAACGATGGTGGTGGAGACG................................................................................................................................................................................................ 27 0 7 0.14 1 1 0 0
......................................GCAACGATGGTGGTGGAGA.................................................................................................................................................................................................. 19 0 7 0.14 1 1 0 0
..............................................GGTGGTGGAGACGGAAAGT.......................................................................................................................................................................................... 19 0 17 0.12 2 2 0 0
...................................................................................................................................................AGTAGGCGCTGGAGACGGCA.................................................................................... 20 0 17 0.12 2 2 0 0
...............................................................................................................................................GTAAAGTAGGCGCTAGAGACG....................................................................................... 21 1 18 0.11 2 2 0 0
..............................................................................ACAATTCGAGCAGGACATTGG........................................................................................................................................................ 21 0 18 0.11 2 2 0 0
...............................................................................CAATTCGAGCAGGACATTGGT....................................................................................................................................................... 21 0 18 0.11 2 2 0 0
.........................................................................GTGGGACAATTCGAGCAGGAC............................................................................................................................................................. 21 0 18 0.11 2 2 0 0
............................................................................GGACAATTCGAGCAGGACA............................................................................................................................................................ 19 0 18 0.11 2 2 0 0
....................................................................................................................................................GTAGGCGCTGGAGACGGCAA................................................................................... 20 0 18 0.11 2 2 0 0
........................................................................GGTGGGACAATTCGAGCAGGA.............................................................................................................................................................. 21 0 18 0.11 2 2 0 0
.................................................................................ATTCGAGCAGGACATTGGT....................................................................................................................................................... 19 0 19 0.11 2 2 0 0
.........................................ACGATGGTGGTGGAGACGG............................................................................................................................................................................................... 19 0 10 0.10 1 1 0 0
.......................................................GATGGTACGTGCTACTCGG................................................................................................................................................................................. 19 3 11 0.09 1 0 1 0
.................................................................................ATTCGAGCAGGACATTGGTCC..................................................................................................................................................... 21 0 12 0.08 1 1 0 0
..........................................................................................................................GCTATAAGCAGGGAAACGATC............................................................................................................ 21 1 12 0.08 1 1 0 0
......................................................................................................................................GAAACGATCGTAAAGTAGGCG................................................................................................ 21 0 12 0.08 1 1 0 0
............................................................................................................................................ATCATAAAGTAGGCGCTGGAT.......................................................................................... 21 2 13 0.08 1 1 0 0
.............................................................................................................................................TCGTAAAGTAGGCGCTGGTT.......................................................................................... 20 2 13 0.08 1 1 0 0
.............................................................................................................................................TCGTAAAGTAGACGCTGGAGA......................................................................................... 21 1 13 0.08 1 1 0 0
..............................................................................................................................................CGTAAAGTAGGCGCTGGAGAC........................................................................................ 21 0 13 0.08 1 1 0 0
.............................................................................................................................................TCGTAAAGTAGGCGCTGGAGAC........................................................................................ 22 0 13 0.08 1 1 0 0
............................................................................................................................................ATCGTAAAGTAGACGCTGGA........................................................................................... 20 1 13 0.08 1 1 0 0
..............................................................................................................................................CGTAAAGTAGGCGCTGGAGA......................................................................................... 20 0 13 0.08 1 1 0 0
..........................................................................................................................................CGATCATAAAGTAGGCGCTGG............................................................................................ 21 1 13 0.08 1 1 0 0
........................................................................................................................................AACGATCGTAAAGTAGGC................................................................................................. 18 0 13 0.08 1 1 0 0
..............................................................................................................................................CGTAAAGTAGACGCTGGAGA......................................................................................... 20 1 13 0.08 1 1 0 0
..............................................................................................................................................CGTAAAGTAGGCGCTGGAG.......................................................................................... 19 0 13 0.08 1 1 0 0
............................................................................................................................................ATCGTAAAGTAGGCGCTG............................................................................................. 18 0 13 0.08 1 1 0 0
............................................................................................................................................ATCGTAAAGTAGGCGCTGGAGA......................................................................................... 22 0 13 0.08 1 1 0 0
........................................................................................................................................AACGACCGTAAAGTAGGCGCTGGAGACG....................................................................................... 28 1 13 0.08 1 1 0 0
...............................................................................................................................................GTAAAGTAGGCGCTGGAGACGG...................................................................................... 22 0 17 0.06 1 1 0 0
.............................................TGGTGGTGGAGACGGAAAGTT......................................................................................................................................................................................... 21 1 17 0.06 1 1 0 0
..................................................................................................................................................AAGTAGGCGCTGGAGACGGCA.................................................................................... 21 0 17 0.06 1 1 0 0
...............................................GTGGTGGAGACGGAGAGTGC........................................................................................................................................................................................ 20 1 17 0.06 1 1 0 0
.................................................................................................................................................AAAGTAGGCGCTGGAGACGGCTTG.................................................................................. 24 2 17 0.06 1 1 0 0
..................................................................................................................................................AAGTAGGCGCTGGAGACGGTTC................................................................................... 22 3 17 0.06 1 1 0 0
.................................................................................................................................................AAAGTAGGCGCTGGAGACGGCG.................................................................................... 22 1 17 0.06 1 1 0 0
.................................................................................................................................................AAAGTAGGCGCTGGAGACGGC..................................................................................... 21 0 17 0.06 1 1 0 0
.............................................TGGTGGTGGAGACGGAAAGTGA........................................................................................................................................................................................ 22 1 17 0.06 1 1 0 0
................................................................................................................................................TAAAGTGGGCGCTGGAGACGG...................................................................................... 21 1 17 0.06 1 1 0 0
....................................................................................................................................................GTAGGCGCTGGAGACGGCAAG.................................................................................. 21 0 18 0.06 1 1 0 0
...............................................................................................................................................ATAAAGTAGGCGCTGGAGACG....................................................................................... 21 1 18 0.06 1 1 0 0
...............................................................................................................................................ATAAAGTAGGCGCTGGAGA......................................................................................... 19 1 18 0.06 1 1 0 0
.............AACTGTCATGGTCAAGGGCG.......................................................................................................................................................................................................................... 20 0 18 0.06 1 1 0 0
................................................................................................................................................TAAAGTAGACGCTGGAGAC........................................................................................ 19 1 18 0.06 1 1 0 0
...............................................................................CAATTCGAGCAGGACATTGG........................................................................................................................................................ 20 0 18 0.06 1 1 0 0
.................................................................................................................................................AAAGTAGACGCTGGAGACG....................................................................................... 19 1 18 0.06 1 1 0 0
..........................................................................TGGGACAATTCGAGCAGGAC............................................................................................................................................................. 20 0 18 0.06 1 1 0 0
...............................................................................................................................................GTAAAGTAGGCGCTGGAGACT....................................................................................... 21 1 18 0.06 1 1 0 0
..........................................................................TGGGACAATTCGAGCAGGACTT........................................................................................................................................................... 22 1 18 0.06 1 1 0 0
................................................................................................................................................................GACGGCAAGCAAAACTCCATGG..................................................................... 22 0 18 0.06 1 1 0 0
.............AACTGTCATGGTCAAGGG............................................................................................................................................................................................................................ 18 0 18 0.06 1 1 0 0
.................................................................................................................................................AAAGTAGGCACTGGAGACG....................................................................................... 19 1 18 0.06 1 1 0 0
...............................................................................................................................................GTAAAGTAGACGCTGGAGAC........................................................................................ 20 1 18 0.06 1 1 0 0
...................................................................................................................................................AGTAGGCGCTGGAGACGG...................................................................................... 18 0 18 0.06 1 1 0 0
......................................................................TCGGTGGGACAATTCGAGCAGG............................................................................................................................................................... 22 0 18 0.06 1 1 0 0
...............................................................................................................................................ATAAAGTAGGCGCTGGAGAC........................................................................................ 20 1 18 0.06 1 1 0 0
...............................................................................CGATTCGAGCAGGACATTGGT....................................................................................................................................................... 21 1 18 0.06 1 1 0 0
................................................................................................................................................TAAAGTAGGCGCTGGAGA......................................................................................... 18 0 18 0.06 1 1 0 0
.......................................................................................................................................................GGCGCTGGAGACGGCAAGCA................................................................................ 20 0 18 0.06 1 1 0 0
...............................................................................................................................................GTAAAGTAGACGCTGGAGA......................................................................................... 19 1 18 0.06 1 1 0 0
..............................................................................ACAATTCGAGCAGGACATTGGTT...................................................................................................................................................... 23 1 18 0.06 1 1 0 0
................................................................................................................................................CAAAGTAGGGGCTGGAGACGT...................................................................................... 21 3 18 0.06 1 0 0 1
....................................................................................................................................................................GCAAGCAAAACTCCATGGAGC.................................................................. 21 0 19 0.05 1 1 0 0
................................................................................AATTCGAGCAGGACATTGGT....................................................................................................................................................... 20 0 19 0.05 1 1 0 0
................................................................................AATTCGAGCAGGACATTGG........................................................................................................................................................ 19 0 19 0.05 1 1 0 0
....................................................................ACTCGGTGGGACAATTCGAGT.................................................................................................................................................................. 21 1 20 0.05 1 1 0 0
.........................................................................................................................................................................CAAAACTCCATGGAGCAAATC............................................................. 21 0 20 0.05 1 0 1 0
......................................................................TCGGTGGGACAATTCGAGC.................................................................................................................................................................. 19 0 20 0.05 1 0 1 0

Anti-sense strand reads

TCGTGTAAACCTATTGACAGTACCAGTTCCCGCACCAGCGTTGCTACCACCACCTCTGCCTTTCACGATGAGCCACCCTGTTAAGCTCGTCCTGTAACCAGGGTGAAGGTACTAATTCCTTCCGATATTCGTGCCTTTGCTAGCATTTCATCCGCGACCTCTGCCGTTCGTTTTGAGGTACCTCGTTTAGATCGTCGGTTAATTCTTCGGTTATATTTCTGTCGGTACCAGTTCCGGGCGGTGTTCGTTGC
******************************************************************************************************************************...((........(((((((((((((......)).)))).))))))).................))*********************************************************** 		Read size # Mismatch Hit Count Total Norm Total V111
male body		 M042
female body
 V057
head
 V042
embryo
 V050
head
........................................................................................................................TCCGATATTCGTGCCTTTGCT.............................................................................................................. 21 0 1 1.00 1 0 1 0 0 0
.....................................................CTCTGCCTTTCACGATGAGC.................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0
.....................................................CTCTGCCTTTCACGATGAGCC................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0
....................................................................................................................................GCCTTTGCTAGCATTTCATCC.................................................................................................. 21 0 4 0.75 3 3 0 0 0 0
.............................................................................................................................AATTCGTGCCTTTGCTAGCATT........................................................................................................ 22 1 3 0.33 1 1 0 0 0 0
..............................................................................................................................ATTCGTGCCTTTGCTAGCATT........................................................................................................ 21 0 3 0.33 1 1 0 0 0 0
..................................................................................................................................GTGCCTTTGCTAGCATTTCATC................................................................................................... 22 0 4 0.25 1 1 0 0 0 0
...........................................................................................................................GATATTCGTGCCTTTGCTAGC........................................................................................................... 21 0 4 0.25 1 1 0 0 0 0
..................................................................................................CAGGGTGAAGGTACTAATT...................................................................................................................................... 19 0 13 0.23 3 3 0 0 0 0
.................................................................................................CCAGGGTGAAGGTACTAAT....................................................................................................................................... 19 0 13 0.23 3 3 0 0 0 0
..............................................................................................................................................................................................................................CGGTACCAGTTCCGGGCGGTG........ 21 0 6 0.17 1 0 1 0 0 0
...................................................................................................AGGGTGAAGGTACTAATTC..................................................................................................................................... 19 0 13 0.15 2 2 0 0 0 0
.........................................................................................................................................TGCTAGCATTTCATCCGCGAC............................................................................................. 21 0 13 0.15 2 2 0 0 0 0
...................................................................................................AGGGTGAAGGTACTAATTCCT................................................................................................................................... 21 0 13 0.15 2 2 0 0 0 0
.....................................................................................................................................................................................................................................AGTTCCGGGCGGTGTTCGTTG. 21 0 7 0.14 1 1 0 0 0 0
....................................AGCGTTGCTACCACCACCT.................................................................................................................................................................................................... 19 0 7 0.14 1 0 1 0 0 0
.....................................GCGTTGCTACCACCACCTCTG................................................................................................................................................................................................. 21 0 7 0.14 1 1 0 0 0 0
.......................................GTTGCTACCACCACCTCTG................................................................................................................................................................................................. 19 0 7 0.14 1 0 1 0 0 0
....................................................................................................................................................................................................................................CAGTTCCGGGCGGTGTTCGTT.. 21 0 7 0.14 1 1 0 0 0 0
..................................................................................................................................................................................................................................ACCATTTCCGGGCGGTGTTCG.... 21 1 7 0.14 1 1 0 0 0 0
..................................................................................................................................................................................................................................ACCAGTTCCGGGCGGTGTTCG.... 21 0 7 0.14 1 1 0 0 0 0
................................................................................................................................................................CTGCCGTTCGTTTTGAGATA....................................................................... 20 1 18 0.11 2 2 0 0 0 0
................................................................................................................................................................CTGCCGTTCGTTTTGAGGTA....................................................................... 20 0 18 0.11 2 2 0 0 0 0
..........................................................................ACCCTGTTAAGCTCGTCCTGT............................................................................................................................................................ 21 0 18 0.11 2 2 0 0 0 0
....................................................................................................................................................................CGTTCGTTTTGAGGTACCT.................................................................... 19 0 19 0.11 2 2 0 0 0 0
............................................................................................................................TTATTCGTGCCTTTGGTA............................................................................................................. 18 2 11 0.09 1 0 0 1 0 0
.......................................................................................TGTCCTGTAACCAGGGTGAAG............................................................................................................................................... 21 1 12 0.08 1 1 0 0 0 0
.............................................................................................GTAACCAGGGTGAAGGTACT.......................................................................................................................................... 20 0 12 0.08 1 1 0 0 0 0
..............................................................................................TAACCAGGGTGAAGGTACTAA........................................................................................................................................ 21 0 12 0.08 1 1 0 0 0 0
....................................................................................................GGGTGAAGGTACTAATTCC.................................................................................................................................... 19 0 13 0.08 1 1 0 0 0 0
.................................................................................................CCAGGGTGAAGGTGCTAGTT...................................................................................................................................... 20 2 13 0.08 1 1 0 0 0 0
...............................................................................................AACCAGGGTGAAGGTACTAAT....................................................................................................................................... 21 0 13 0.08 1 1 0 0 0 0
............................................................................CCTGTTAAGCTCGTCCTGTAAC......................................................................................................................................................... 22 0 17 0.06 1 0 0 0 0 1
....................................................................................................................................................................................................GGTCAATTCTTCGGTCATAG................................... 20 3 17 0.06 1 0 0 0 1 0
...........................................................................CCCTGTTAAGCTCGTCCTG............................................................................................................................................................. 19 0 18 0.06 1 1 0 0 0 0
..............................................................................................................................................................CTCTGCCGTTCGTTTTGAGGTA....................................................................... 22 0 18 0.06 1 1 0 0 0 0
.....................................................................TTGCCACCCTGTTAAGCTCGT................................................................................................................................................................. 21 2 18 0.06 1 1 0 0 0 0
.........................................................................................................................................................GCGATCTCTGCCGTTCGTTT.............................................................................. 20 1 19 0.05 1 1 0 0 0 0
.........................................................................................................................................................GCGACCTCTGCCGTTCGTTT.............................................................................. 20 0 19 0.05 1 1 0 0 0 0
........................................................................................................................................................................CGTTTTGAGGTACCTCGTT................................................................ 19 0 20 0.05 1 1 0 0 0 0
....................................................................................................................................................................CGTTGGTTTTGATGTAGCTC................................................................... 20 3 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................TTTTGAGGTACCTCGTTTAG............................................................. 20 0 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_4598:1379-1629 - dpe_1702 AGCA--CATTTGG-ATAACTGTCATGGTCAAGGGCGTGGTCGCAACGATGGTGGTGGAGACGGAAAGTGCTACTCGGTGGGACAATTCGAGCA-GGACATTGGTCCCACTTCCATGATTAAGGAAGGCTATAAGCACG--GAAACGA----TCGT--AA------------------------------------------------------------------------------------------------------------AGTAGGCGCTGGAGACGGCAA--------GCAAAACTCCATGGAGCAAATCTAGCAGCCAATTAAGAAGCCA-ATATAAAGACAGCCATGGTCAAGGCCCGC-------------------------------CACAAGCAACG
dp5 XL_group1e:2727239-2727492 - TCTC--TCAAAAATT--------------------------------------------------------------------------GA-AAAA----------------------C------G-------------------------CCAAG--AC-GT-----GATTAAA--------TTTTTTTGATGAATCTTAATCTGTCGGGTTCTTACTACGTGTTTTGAATTTTTTACTGTCTCTAGTAGTTGTTATGTCTTCGTAATTGAAGGTTAAAGTGAGGCCTTTAACATGTGCCAACTTGTAATGAAAACTAATT-TTTGAAAAGGTGTACA-AAGTGAGTCCTAC------CTAGTCCCACCCTGAAACCTTTTGTGTGTCGTAGATTA---ATAAATTCTTT
droAna3 scaffold_12911:2888931-2889183 + CATC--ACATTGC-G--------------------------------------------------------------------------CA-AAAA----------------------A------T-------------------------ACAACA-ATTTT-----AC-CAAT--------CTTTAGACATGAATAAGATTCAGTGGGGTTTGTACTACGTGTTGTGTATAATGAAATGTTATATATTGTTGTGGTGTCTTCGTAGTTATATGTTAAAGTGAATCGTCTGAACTGTGAA-AATTGTGTAGAAATCTCGTT-TTTATAAAGCTGTAGA-AAGTGAGTCCAGC------CTAGTCCAACTTTGAAACCTTTTGTACGTCGTAGAGTA---ATTAATTATCT
droBip1 scf7180000395153:39012-39279 - TGTT--ATTTTCA-ATA-------------------------------------------------------------------------------------------------------------AAAAAATTTGTT--TAAAAAA----AAAAAATTT-GA-----ATA-AA----------ATTTGTGATGGGTTCTAACCAGTGGGGTTTGTACTACGTGTTTTGTAATATGAAATGTTTCAATTTGTTGTGATGTTTTCGAAGTTATATGTAAAAGTAAGTCGTCTAACAAGTGTAATATTGAAATTGAATCTCATT-TTCGAAAAGGTGTACA-AAGTGAGTCCAAA------CTAGTCCAACCCTGAAACCTATTGTGTGTCGTATAGTAGTTATCAATTCTTT
droKik1 scf7180000302473:942950-943204 + TTAG--GAAAACTCA--------------------------------------------------------------------------TG-GAAA----------------------A------A-------------------------ACAAG--AA-TT-----GTTAAAT--------TTTTTAACTTGAATTTGAATCAGTGGGATATGTACTACATGTTTTAAATAGTAAAATGTTTTAAGTCGTTGTGATGTCTTTTTAATTTGGTGTTAAAGTCTATCGTCTAAAATATTAAAATTTTATTTTAAATGTAATT-TTCAAAAAGGTATATAAAAGTGAGTCCAGC------CTAGTCCAACCTTGAAACCAATGGTGTGTTGTAGAGTA---ATTAATTCTTG
droFic1 scf7180000449914:28283-28490 + CTTT--AAAAGGT-T--------------------------------------------------------------------------TA-AA-----------------------------------AAGCGCA--TTTAA--A-ACCA-----ATTT-AT-----GTA-AAA--------TGTGTGAATGGAAGTCGATTCAGAATGGTTTGTAATATGTGTTTTTGAGCTTGAATTATAAAAATTGATTGTGGCGTCCCTATAATCTTGTGTAAGTTCTAACC-TCAAAAATTTGAA-ACGTAATCATAAATTTTGTT-TTTAAATAGAGCAACA-AAGTGAGTCC-------------------------------------------------------------
droEle1 scf7180000490714:66673-66926 + ACTA--AAAAAGAAG--------------------------------------------------------------------------CA-ATAA----------------------A------A-------------------------CCAA--TTC-AA-----GTGCAAT--------TTTTTGGCATGCAGTCCAACAATAGTGGTTTGTAATATGTGTTTGTAAACGTGAATTGTAGTTATCGATTGTGACGTCCCTGTTATTTTCTGTAAGTTATAACCCCCAAAAATATAAAAACTTGTAGTGATTTGTTATT-TTTAAATAGAGCTACA-AAGTGATTCAAGC------ACTTTCAAGCTCTAAAACTTCTTACATGTTGTAGATTA---CTCAATTACTT
droRho1 scf7180000779528:22702-22963 - TTTT--TAAAGCG-T--------------------------------------------------------------------------TA-AA----------------------------------AAAAGCAG--TTTAT--A-AGCG-----TTCC-AA-----AAA-ATT--------TTTGTGATATGAATTCGATGAATGGTGGTGTATACTAAGTGTTTGTGTGTTTAAACGGTTGAAATCTATCGTGCTTTCTTTGTACTTAAGTGTTAAAGTGAGTTGTCTAAAACGCGTT-TTTTAATTAGAAAACTAATT-TTTAAGTAGAGTAACA-AAGTGAGTCCAGC------GGAGTCCACTTCTGAAACCTATTGAGATTTGTAGAGTA---CTAAATTCTTT
droBia1 scf7180000301518:1140309-1140528 + TTCC--TTAAAAC-T--------------------------------------------------------------------------TAAA-AGC---------------------T------AAAAAAAAGTGTG--AAATTGA----TCAA--ATT-AA-----GTG-CTG--------TTTTTGAAATGCAGTCCATAAAGAGTGGTTTGTATTATGTGTTTGTGATCGTGATTTTTAGATTTTTATTGTGGTGTCCCTTTAATCTTGTGTAAGTTCTAACCTTAAAAAAACTTAAAACATGTAGTAAATTATAATC-TTTAAATAGAGCTACA-AAGTGAGTCC-------------------------------------------------------------
droTak1 scf7180000410941:10871-11131 + ACTATTTAATTG--C--------------------------------------------------------------------------TA-AA----------------------------------AATAAGAG--TCTTA--A-AGCA-----ATTT-AA-----GTG-GAG--------TTTTTTTAATTAATTCAAAGGATGGTAGTGTCCACAACGTATTTGTGTGATTAAACAATCTAAATTAATCGTGATTTTCTTGAAATCGATTATTTTTGTGACCGGCCTAACACGAAT--ATTTTTAAAGAAAACCAATT-TTTAAATAGAGATACA-AAGCGAGTCCAGC------GGAGTCCATCCATCAAACCTTTG-GGAATTAAAGAGTA---AGGAATTCTCT
droEug1 scf7180000405637:22952-23216 + TGAT--ACTTTCA-AAA-------------------------------------------------------------------------------------------------------------AGAGAATTAGTT--AAAAAAA----ACAAAT-TTTAA-----ATT-AAA--------T--TTTTGATGAGTTCTAAGCAATGGGGTTTGTACTACGTGTTTTGTAATGTGAAATGTTTCAAGCCGTTTTGATGTCTTCGTAGTTATATGTAAAAGTAAGTCGTCTAACAAGTGTAATATTGAAACTAAATCTCATT-TTCGAAAAGGTGTACA-AAGTGAGTCCAAC------CTAGTCCAACCCTGAAACCTTTTGTGTGTCGTAGAGTA---ACCAATTCTTG
droSim2 2l:17110679-17110905 + TTTT--TCCCTTG-ACA-------------------------------------------------------------------------------------------------------------CAAATATTT-----TAA--T-ATCT-----TTTT-AACCAAAGCG-TTGTTTTTCATTCTGCAAAATGAGTTATATTCAGTGTGGTTTATATTATGTGTTTGTGACTGTCAAAACTAAC-AAAAATCGTGTTGTCCCCTTAATACCGTCAAAATGTAAGTCGTCTGACTAAAATATTTTTGTGATATAAACTTAAC-CTTTAAAAGGGATTTA-AAGTGAATGCAGC------AAAA------------------------------------------------
droYak3 2R:1324593-1324818 - TCGC--TGAAAAA-TCG------------------------------------------------------------------------TACA-AGT---------------------TTGAAGTGACAAAAAGTGCA--TAAACAA----TTAT--CAA-AA-----GTG-TTA--------CTTATAATATGAAGTCGAATCCTTGTGGTTTTTAATATGTGTTTGTGATCTTCGAATGT------TAGCTGTGGTGTCCCAATAATCTTCAGTAAGTTTTAACCCTTATAAAAAACAACTTTTGTAGTGTATTCTAATT-TTTAAATAGAGCTACA-AAGTGAGTCCGGC------C---------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
AGCA--CATTTGG-ATAACTGTCATGGTCAAGGGCGTGGTCGCAACGATGGTGGTGGAGACGGAAAGTGCTACTCGGTGGGACAATTCGAGCA-GGACATTGGTCCCACTTCCATGATTAAGGAAGGCTATAAGCACG--GAAACGA----TCGT--AA------------------------------------------------------------------------------------------------------------AGTAGGCGCTGGAGACGGCAA--------GCAAAACTCCATGGAGCAAATCTAGCAGCCAATTAAGAAGCCA-ATATAAAGACAGCCATGGTCAAGGCCCGC-------------------------------CACAAGCAACGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................................GAAAGTGCTACTCGGTGGGA.........................................................................................................................................................................................................................................................................................................................................2014.004000004
...............................................................AAAGTGCTACTCGGTGGGA.........................................................................................................................................................................................................................................................................................................................................1913.003000003
...............................................................AAAGTGCTACTCGGTGGGAC........................................................................................................................................................................................................................................................................................................................................2011.001000001
.................................................GGTGGTGGAGACGGAAAGTG......................................................................................................................................................................................................................................................................................................................................................20171.00170000017
..............................................................GAAAGTGCTACTCGGTGGGACA.......................................................................................................................................................................................................................................................................................................................................2211.001000001
..............................................................GAAAGTGCTACTCGGTGGG..........................................................................................................................................................................................................................................................................................................................................1911.001000001
............................................................................................................CTTCCATGATTAAGGAAGGCT..........................................................................................................................................................................................................................................................................................2111.001000001
..................................................GTGGTGGAGACGGAAAGTGCT....................................................................................................................................................................................................................................................................................................................................................2111.001000001
..............................................................GAAAGTGCTACTCGGTGGGAC........................................................................................................................................................................................................................................................................................................................................2111.001000001
................................................................AAGTGCTACTCGGTGGGAC........................................................................................................................................................................................................................................................................................................................................1911.001000001
.................................................................................................................ATGATTAAGGAAGGCTATAAGC....................................................................................................................................................................................................................................................................................2211.001000001
................................................TGGTGGTGGAGACGGAAAGTG......................................................................................................................................................................................................................................................................................................................................................21170.71120000012
............................................................................................................................................GAAACGA----TCGT--AA------------------------------------------------------------------------------------------------------------AGTAGG..........................................................................................................................................19120.587000007
..................................................GTGGTGGAGACGGAAAGTG......................................................................................................................................................................................................................................................................................................................................................19170.539000009
...............................................................AAAGTGCTACTCGGTGGGTTT.......................................................................................................................................................................................................................................................................................................................................2120.501000001
.........................................................................................................................................................GT--AA------------------------------------------------------------------------------------------------------------AGTAGGCGCTGGAGACG...............................................................................................................................21180.509000009
.......................................................................................................................................................TCGT--AA------------------------------------------------------------------------------------------------------------AGTAGGCGCTGGAG..................................................................................................................................20130.466000006
..................................................GTGGTGGAGACGGAAAGTGC.....................................................................................................................................................................................................................................................................................................................................................20170.356000006
.........................................................................................................................................................GT--AA------------------------------------------------------------------------------------------------------------AGTAGGCGCTGGAGAC................................................................................................................................20180.336000006
..........................................................................................................................................................T--AA------------------------------------------------------------------------------------------------------------AGTAGGCGCTGGAGAC................................................................................................................................19180.336000006
.............................................................................................................................................AAACGA----TCGT--AA------------------------------------------------------------------------------------------------------------AGTAGGC.........................................................................................................................................19130.314000004
.......................................................................................................................................................TCGT--AA------------------------------------------------------------------------------------------------------------AGTAGGCGCTGGAGA.................................................................................................................................21130.314000004
..............................................................................................................................................................A------------------------------------------------------------------------------------------------------------AGTAGGCGCTGGAGACGG..............................................................................................................................19170.295000005
.........................................GCAACGATGGTGGTGGAGACG.............................................................................................................................................................................................................................................................................................................................................................2170.292000002
.........................................................................................................................................................GT--AA------------------------------------------------------------------------------------------------------------AGTAGGCGCTGGAGA.................................................................................................................................19180.285000005
....................................................................................................................................AGCACG--GAAACGA----TCGT--AA------------------------------------------------------------------------------------------------------------AG..............................................................................................................................................2140.251000001
.............................................................................................................................................AAACGA----TCGT--AA------------------------------------------------------------------------------------------------------------AGTAGGCG........................................................................................................................................20130.233000003
............................................................................GTGGGACAATTCGAGCA-GG...........................................................................................................................................................................................................................................................................................................................19180.224000004
..........................................................................................................................................................T--AA------------------------------------------------------------------------------------------------------------AGTAGGCGCTGGAGACG...............................................................................................................................20180.224000004
...........................................................................GGTGGGACAATTCGAGCA-GG...........................................................................................................................................................................................................................................................................................................................20180.224000004
....................GTCATGGTCAAGGGCGTGGT...................................................................................................................................................................................................................................................................................................................................................................................2050.201000001
...........................TCAAGGGCGTGGTCGCAACGA...........................................................................................................................................................................................................................................................................................................................................................................2150.201000001
....................GTCATGGTCAAGGGCGTGGTCG.................................................................................................................................................................................................................................................................................................................................................................................2250.201000001
.....................TCATGGTCAAGGGCGTGGTCG.................................................................................................................................................................................................................................................................................................................................................................................2150.201000001
............................CAAGGGCGTGGTCGCAACGATA.........................................................................................................................................................................................................................................................................................................................................................................22110.182000002
................................................TGGTGGTGGAGACGGAAAG........................................................................................................................................................................................................................................................................................................................................................19170.183000003
.............................................................................................................................................................AA------------------------------------------------------------------------------------------------------------AGTAGGCGCTGGAGACGG..............................................................................................................................20170.183000003
..........................................................................................................................................................T--AA------------------------------------------------------------------------------------------------------------AGTAGGCGCTGGAGACGG..............................................................................................................................21170.183000003
................................................TGGTGGTGGAGACGGAAAGT.......................................................................................................................................................................................................................................................................................................................................................20170.183000003
.................................................GGTGGTGGAGACGGAAAGTGC.....................................................................................................................................................................................................................................................................................................................................................21170.183000003
............................................................................GTGGGACAATTCGAGCA-GGA..........................................................................................................................................................................................................................................................................................................................20180.173000003
...........................................................................................................................................................................................................................................................................AGTAGGCGCTGGAGACGGT.............................................................................................................................19180.173000003
..........................................................................CGGTGGGACAATTCGAGCA-G............................................................................................................................................................................................................................................................................................................................20180.173000003
.................................................................................ACAATTCGAGCA-GGACATTG.....................................................................................................................................................................................................................................................................................................................20180.173000003
...................................................TGGTGGAGACGGAAAGTGC.....................................................................................................................................................................................................................................................................................................................................................19180.173000003
.............................................................................................................................................................AA------------------------------------------------------------------------------------------------------------AGTAGGCGCTGGAGACG...............................................................................................................................19180.173000003
............................................................................................................................................GAAACGA----TCGT--AA------------------------------------------------------------------------------------------------------------AGTAGGC.........................................................................................................................................20120.172000002
...............................................................................................................................................................................................................................................................................GGCGCTGGAGACGGCAA--------GC.................................................................................................................19180.173000003
..................................................................................................................................................A----TCGT--AA------------------------------------------------------------------------------------------------------------AGTAGGCGCTGGAG..................................................................................................................................21130.152000002
..................................................................................................................................................A----TCGT--AA------------------------------------------------------------------------------------------------------------AGTAGGCGCTGGA...................................................................................................................................20130.152000002
..................................................................................................................................................A----TCGT--AA------------------------------------------------------------------------------------------------------------AGTAGGCGCTGG....................................................................................................................................19130.152000002
........................................................................................................................................................CGT--AA------------------------------------------------------------------------------------------------------------AGTAGGCGCTGGA...................................................................................................................................18130.152000002
.....................................GGTCGCAACGATGGTGGTGGA.................................................................................................................................................................................................................................................................................................................................................................2170.141000001
.........................................GCAACGATGGTGGTGGAGACGT............................................................................................................................................................................................................................................................................................................................................................2270.141000001
...................................GTGGTCGCAACGATGGTGGTGGAGACG.............................................................................................................................................................................................................................................................................................................................................................2770.141000001
.........................................GCAACGATGGTGGTGGAGA...............................................................................................................................................................................................................................................................................................................................................................1970.141000001
.................................................GGTGGTGGAGACGGAAAGT.......................................................................................................................................................................................................................................................................................................................................................19170.122000002
...........................................................................................................................................................................................................................................................................AGTAGGCGCTGGAGACGGCA............................................................................................................................20170.122000002
.................................................................................ACAATTCGAGCA-GGACATTGG....................................................................................................................................................................................................................................................................................................................21180.112000002
..................................................................................CAATTCGAGCA-GGACATTGGT...................................................................................................................................................................................................................................................................................................................21180.112000002
............................................................................GTGGGACAATTCGAGCA-GGAC.........................................................................................................................................................................................................................................................................................................................21180.112000002
...............................................................................GGACAATTCGAGCA-GGACA........................................................................................................................................................................................................................................................................................................................19180.112000002
............................................................................................................................................................................................................................................................................GTAGGCGCTGGAGACGGCAA--------...................................................................................................................20180.112000002
...........................................................................GGTGGGACAATTCGAGCA-GGA..........................................................................................................................................................................................................................................................................................................................21180.112000002
....................................................................................ATTCGAGCA-GGACATTGGT...................................................................................................................................................................................................................................................................................................................19190.112000002
............................................ACGATGGTGGTGGAGACGG............................................................................................................................................................................................................................................................................................................................................................19100.101000001
....................................................................................ATTCGAGCA-GGACATTGGTCC.................................................................................................................................................................................................................................................................................................................21120.081000001
............................................................................................................................................GAAACGA----TCGT--AA------------------------------------------------------------------------------------------------------------AGTAGGCG........................................................................................................................................21120.081000001
.......................................................................................................................................................TCGT--AA------------------------------------------------------------------------------------------------------------AGTAGGCGCTGGTT..................................................................................................................................20130.081000001
........................................................................................................................................................CGT--AA------------------------------------------------------------------------------------------------------------AGTAGGCGCTGGAGAC................................................................................................................................21130.081000001
.......................................................................................................................................................TCGT--AA------------------------------------------------------------------------------------------------------------AGTAGGCGCTGGAGAC................................................................................................................................22130.081000001
........................................................................................................................................................CGT--AA------------------------------------------------------------------------------------------------------------AGTAGGCGCTGGAGA.................................................................................................................................20130.081000001
..............................................................................................................................................AACGA----TCGT--AA------------------------------------------------------------------------------------------------------------AGTAGGC.........................................................................................................................................18130.081000001
........................................................................................................................................................CGT--AA------------------------------------------------------------------------------------------------------------AGTAGGCGCTGGAG..................................................................................................................................19130.081000001
..................................................................................................................................................A----TCGT--AA------------------------------------------------------------------------------------------------------------AGTAGGCGCTG.....................................................................................................................................18130.081000001
..................................................................................................................................................A----TCGT--AA------------------------------------------------------------------------------------------------------------AGTAGGCGCTGGAGA.................................................................................................................................22130.081000001
.........................................................................................................................................................GT--AA------------------------------------------------------------------------------------------------------------AGTAGGCGCTGGAGACGG..............................................................................................................................22170.061000001
................................................TGGTGGTGGAGACGGAAAGTT......................................................................................................................................................................................................................................................................................................................................................21170.061000001
..............................................................................................................................................................A------------------------------------------------------------------------------------------------------------AGTAGGCGCTGGAGACGGCA............................................................................................................................21170.061000001
..............................................................................................................................................................A------------------------------------------------------------------------------------------------------------AGTAGGCGCTGGAGACGGTTC--------...................................................................................................................22170.061000001
.............................................................................................................................................................AA------------------------------------------------------------------------------------------------------------AGTAGGCGCTGGAGACGGCG............................................................................................................................22170.061000001
.............................................................................................................................................................AA------------------------------------------------------------------------------------------------------------AGTAGGCGCTGGAGACGGC.............................................................................................................................21170.061000001
................................................TGGTGGTGGAGACGGAAAGTGA.....................................................................................................................................................................................................................................................................................................................................................22170.061000001
............................................................................................................................................................................................................................................................................GTAGGCGCTGGAGACGGCAA--------G..................................................................................................................21180.061000001
................AACTGTCATGGTCAAGGGCG.......................................................................................................................................................................................................................................................................................................................................................................................20180.061000001
..................................................................................CAATTCGAGCA-GGACATTGG....................................................................................................................................................................................................................................................................................................................20180.061000001
.............................................................................TGGGACAATTCGAGCA-GGAC.........................................................................................................................................................................................................................................................................................................................20180.061000001
.........................................................................................................................................................GT--AA------------------------------------------------------------------------------------------------------------AGTAGGCGCTGGAGACT...............................................................................................................................21180.061000001
........................................................................................................................................................................................................................................................................................GACGGCAA--------GCAAAACTCCATGG.....................................................................................................22180.061000001
................AACTGTCATGGTCAAGGG.........................................................................................................................................................................................................................................................................................................................................................................................18180.061000001
...........................................................................................................................................................................................................................................................................AGTAGGCGCTGGAGACGG..............................................................................................................................18180.061000001
.........................................................................TCGGTGGGACAATTCGAGCA-GG...........................................................................................................................................................................................................................................................................................................................22180.061000001
..........................................................................................................................................................T--AA------------------------------------------------------------------------------------------------------------AGTAGGCGCTGGAGA.................................................................................................................................18180.061000001
...............................................................................................................................................................................................................................................................................GGCGCTGGAGACGGCAA--------GCA................................................................................................................20180.061000001
.................................................................................ACAATTCGAGCA-GGACATTGGTT..................................................................................................................................................................................................................................................................................................................23180.061000001
............................................................................................................................................................................................................................................................................................GCAA--------GCAAAACTCCATGGAGC..................................................................................................21190.051000001
...................................................................................AATTCGAGCA-GGACATTGGT...................................................................................................................................................................................................................................................................................................................20190.051000001
...................................................................................AATTCGAGCA-GGACATTGG....................................................................................................................................................................................................................................................................................................................19190.051000001
.......................................................................ACTCGGTGGGACAATTCGAGT...............................................................................................................................................................................................................................................................................................................................21200.051000001
.........................................................................................................................................................................................................................................................................................................CAAAACTCCATGGAGCAAATC.............................................................................................21200.051010000
.........................................................................TCGGTGGGACAATTCGAGC...............................................................................................................................................................................................................................................................................................................................19200.051010000
dp5
TCTC--TCAAAAATT--------------------------------------------------------------------------GA-AAAA----------------------C------G-------------------------CCAAG--AC-GT-----GATTAAA--------TTTTTTTGATGAATCTTAATCTGTCGGGTTCTTACTACGTGTTTTGAATTTTTTACTGTCTCTAGTAGTTGTTATGTCTTCGTAATTGAAGGTTAAAGTGAGGCCTTTAACATGTGCCAACTTGTAATGAAAACTAATT-TTTGAAAAGGTGTACA-AAGTGAGTCCTAC------CTAGTCCCACCCTGAAACCTTTTGTGTGTCGTAGATTA---ATAAATTCTTTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................................................................................................................................TGAATTTTTTACTGTCTCTAG...................................................................................................................................................................2111.0010000000100
...............................................................................................................................................................................................ATGAATCTTAATCTGTCGGGC.......................................................................................................................................................................................................2180.8870200000500
...............................................................................................................................................................................................ATGAATCTTAATCTGTCGGG........................................................................................................................................................................................................2080.7560000000600
...............................................................................................................................................................................................ATGAATCTTAATCTGTCGGGTT......................................................................................................................................................................................................2280.5040000000400
..............................................................................................................................................................AC-GT-----GATTAAA--------TTTTTTTGATGAATCT....................................................................................................................................................................................................................2760.3320000000200
.........................................................................................................................................................................................TTTTTGATGAATCTTAATCTGTCGGGC.......................................................................................................................................................................................................2770.2920000000200
...........................................................................................................................................................................................TTTGATGAATCTTAATCTGTCGG.........................................................................................................................................................................................................2380.2520000000200
............................................................................................................................................................................................................................................................................................................CAACTTGTAATGAAAACTAATT-TTTGA...................................................................................2780.2520000000200
...............................................................................................................................................................................................................................................................................................................CTTGTAATGAAAACTAATT-TTTGAAAA................................................................................2780.2520100000100
...............................................................................................................................................................................................................................................................................................................CTTGTAATGAAAACTAATT-TTTGAAA.................................................................................2680.2520000000200
........................................................................................................................................................................................................................................................................................................................................................................TAGTCCCACCCTGAAACCTTTTGTG..........................2550.2010000000010
......................................................................................................................................................................................................................................................................................................................................................GTGAGTCCTAC------CTAGTCCCACCCT.......................................2470.1410100000000
.......................................................................................................................................................................................................................................................................................................................................................TGAGTCCTAC------CTAGTCCCACCCTGAAAA..................................2870.1410100000000
.........................................................................................................................................................................................TTTTTGATGAATCTTAATCTGTCGGG........................................................................................................................................................................................................2670.1410000000100
...........................................................................................................................................................................................................................................................................................................................................................................................TTTGTGTGTCGTAGATTA---ATAAAT.....2470.1410000001000
...............................................................................................................................................................................................................................................................................................................CTTGTAATGAAAACTAATT-TTTGA...................................................................................2480.1310000000100
................................................................................................................................................................................................................................................................................................................TTGTAATGAAAACTAATT-TTTGAA..................................................................................2480.1310100000000
................................................................................................................................................................................................................................................................................................................TTGTAATGAAAACTAATT-TTTGA...................................................................................2380.1310100000000
.............................................................................................................................................................................................TGATGAATCTTAATCTGTCGGGC.......................................................................................................................................................................................................2380.1310100000000
............................................................................................................................................................................................................................................................................................................CAACTTGTAATGAAAACTAATT-TT......................................................................................2480.1310000000100
...............................................................................................................................................................................................................................................................................................................CTTGTAATGAAAACTAATT-TTTGAA..................................................................................2580.1310100000000
.....................................................................................................................................................................................................................................................................TTCGTAATTGAAGGTTAAAGTGAGGC............................................................................................................................2680.1310100000000
...............................................................................................................................................................................................................................................................................................................................................TACA-AAGTGAGTCCTAC------CTAGTCCC............................................2590.1110100000000
...............................................................................................................................................................................................................................................................................................................CTTGTAATGAAAACTAATT-TTTG....................................................................................2390.1110100000000
...........................................................................................................................................................................................................................................................................................................................................................TCCTAC------CTAGTCCCACCCTGAAACC.................................2590.1110100000000
...............................................................................................................................................................................................................................................................................................................................................................................................TGTGTCGTAGATTA---ATAAATT....21100.1010000000100
..............................................................................................................................................................................................................................................................................................................................................................TAC------CTAGTCCCACCCTGAAACCTT...............................24100.1010100000000
.............................................................................................................................................................................................................................................................................................................................................TGTACA-AAGTGAGTCCTAC------CTAGT...............................................24120.0810100000000
................................................................................................................................................................................................................................TTTTGAATTTTTTACTGAA........................................................................................................................................................................19200.0510100000000
droAna3
CATC--ACATTGC-G--------------------------------------------------------------------------CA-AAAA----------------------A------T-------------------------ACAACA-ATTTT-----AC-CAAT--------CTTTAGACATGAATAAGATTCAGTGGGGTTTGTACTACGTGTTGTGTATAATGAAATGTTATATATTGTTGTGGTGTCTTCGTAGTTATATGTTAAAGTGAATCGTCTGAACTGTGAA-AATTGTGTAGAAATCTCGTT-TTTATAAAGCTGTAGA-AAGTGAGTCCAGC------CTAGTCCAACTTTGAAACCTTTTGTACGTCGTAGAGTA---ATTAATTATCTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................................ATGAATAAGATTCAGTGGGGTTTGT...................................................................................................................................................................................................25120.334031000
..................................................................................................................................................................................................................................................................................................TGAACTGTGAA-AATTGTGTAGAAATC..............................................................................................26120.081000010
.......................................................................................................................................................................................................................................................................................................TGTGAA-AATTGTGTAGAAATCTCGTT-T.......................................................................................27120.081100000
........ATTGC-G--------------------------------------------------------------------------CA-AAAA----------------------A------T-------------------------ACAACA-ATTTT-----T..................................................................................................................................................................................................................................................26120.081010000
..................................................................................................................................................................T-----AC-CAAT--------CTTTAGACATGAATAAGAT.................................................................................................................................................................................................................26120.081010000
..................................................................................................................................................................................................................................................TATATATTGTTGTGGTGTCTTCGTAGT..............................................................................................................................................27120.081010000
..................................................................................................................................................................................................................GTTTGTACTACGTGTTGTGTATA..................................................................................................................................................................................23120.081000010
.....................................................................................................................................................................................................................................................................................................ACTGTGAA-AATTGTGTAGAAATCTCG...........................................................................................26120.081000010
...............................................................................................................................................................................................ATGAATAAGATTCAGTGGGGTT......................................................................................................................................................................................................22120.081100000
...............................................................................................................................................................................................................................................................................TATGTTAAAGTGAATCGTCTGAACTG..................................................................................................................26120.081010000
...............................................................................................................................................................................................ATGAATAAGATTCAGTGGGGTTT.....................................................................................................................................................................................................23120.081000010
....................................................................................................................................................................................................................................................................................TAAAGTGAATCGTCTGAACTGTGAA-AA...........................................................................................................27120.081100000
..................................................................................................................................................................................................................................................TATATATTGTTGTGGTGTCTTCGTAG...............................................................................................................................................26120.081010000
............................................................................................................................................................................................................................................................................TTATATGTTAAAGTGAATCGTCTGAACT...................................................................................................................28120.081000010
..............................................................................................................................................................................................................................................................................................................................................................................................GTACGTCGTAGAGTA---ATTAATTA...23120.081000010
........................................................................................................................................................................................................................................................................................................................................AAAGCTGTAGA-AAGTGAGTCCAGC------....................................................24120.081100000
.........................................................................................................................................................................C-CAAT--------CTTTAGACATGAATAAGAT.................................................................................................................................................................................................................24120.081010000
..............................................................................................................................................................................T--------CTTTAGACATGAATAAGATTCAGT............................................................................................................................................................................................................25120.081001000
................................................................................................................................................................................................................................................................................................TCTGAACTGTGAA-AATTGTGTAGAAATC..............................................................................................28120.081000010
..........................................................................................................................................................................................................................................................................................................GAA-AATTGTGTAGAAATCTCGTT-........................................................................................23120.081000010
............................................................................................................................................................................................GACATGAATAAGATTCAGTGGGGT.......................................................................................................................................................................................................24120.081010000
.............................................................................................................................................................................................................................................................................TATATGTTAAAGTGAATCGTCTGAAC....................................................................................................................26120.081010000
...................................................................................................................................................................................................................................................................TCTTCGTAGTTATATGTTAAAGTGAA..............................................................................................................................26120.081010000
.........................................................................................................................................................................................TTAGACATGAATAAGATTCAGTGGG.........................................................................................................................................................................................................25120.081100000
..........................................................................................................................................................................................TAGACATGAATAAGATTCAGTGGGGT.......................................................................................................................................................................................................26120.081100000
.............................................................................................................................................................................................................................................................................................................................................TGTAGA-AAGTGAGTCCAGC------CTAGTCC.............................................26130.081100000
..........................................................................................................................................................................................................TCAGTGGGGTTTGTACTACGTGTT.........................................................................................................................................................................................24130.081010000
..............................................................................................................................................................................................................................................................................................................................................GTAGA-AAGTGAGTCCAGC------CTAGTCC.............................................25130.081100000
.................................................................................................................................................................................................................................................................................................................................................GA-AAGTGAGTCCAGC------CTAGTCCAAC..........................................25130.081010000
..........................................................................................................................................................................................................TCAGTGGGGTTTGTACTACGTGTTG........................................................................................................................................................................................25130.081100000
droBip1
TGTT--ATTTTCA-ATA-------------------------------------------------------------------------------------------------------------AAAAAATTTGTT--TAAAAAA----AAAAAATTT-GA-----ATA-AA----------ATTTGTGATGGGTTCTAACCAGTGGGGTTTGTACTACGTGTTTTGTAATATGAAATGTTTCAATTTGTTGTGATGTTTTCGAAGTTATATGTAAAAGTAAGTCGTCTAACAAGTGTAATATTGAAATTGAATCTCATT-TTCGAAAAGGTGTACA-AAGTGAGTCCAAA------CTAGTCCAACCCTGAAACCTATTGTGTGTCGTATAGTAGTTATCAATTCTTTSizeHit CountTotal NormTotal
No Reads
droKik1
TTAG--GAAAACTCA--------------------------------------------------------------------------TG-GAAA----------------------A------A-------------------------ACAAG--AA-TT-----GTTAAAT--------TTTTTAACTTGAATTTGAATCAGTGGGATATGTACTACATGTTTTAAATAGTAAAATGTTTTAAGTCGTTGTGATGTCTTTTTAATTTGGTGTTAAAGTCTATCGTCTAAAATATTAAAATTTTATTTTAAATGTAATT-TTCAAAAAGGTATATAAAAGTGAGTCCAGC------CTAGTCCAACCTTGAAACCAATGGTGTGTTGTAGAGTA---ATTAATTCTTGSizeHit CountTotal NormTotal
No Reads
droFic1
CTTT--AAAAGGT-T--------------------------------------------------------------------------TA-AA-----------------------------------AAGCGCA--TTTAA--A-ACCA-----ATTT-AT-----GTA-AAA--------TGTGTGAATGGAAGTCGATTCAGAATGGTTTGTAATATGTGTTTTTGAGCTTGAATTATAAAAATTGATTGTGGCGTCCCTATAATCTTGTGTAAGTTCTAACC-TCAAAAATTTGAA-ACGTAATCATAAATTTTGTT-TTTAAATAGAGCAACA-AAGTGAGTCC-------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
ACTA--AAAAAGAAG--------------------------------------------------------------------------CA-ATAA----------------------A------A-------------------------CCAA--TTC-AA-----GTGCAAT--------TTTTTGGCATGCAGTCCAACAATAGTGGTTTGTAATATGTGTTTGTAAACGTGAATTGTAGTTATCGATTGTGACGTCCCTGTTATTTTCTGTAAGTTATAACCCCCAAAAATATAAAAACTTGTAGTGATTTGTTATT-TTTAAATAGAGCTACA-AAGTGATTCAAGC------ACTTTCAAGCTCTAAAACTTCTTACATGTTGTAGATTA---CTCAATTACTTSizeHit CountTotal NormTotal
No Reads
droRho1
TTTT--TAAAGCG-T--------------------------------------------------------------------------TA-AA----------------------------------AAAAGCAG--TTTAT--A-AGCG-----TTCC-AA-----AAA-ATT--------TTTGTGATATGAATTCGATGAATGGTGGTGTATACTAAGTGTTTGTGTGTTTAAACGGTTGAAATCTATCGTGCTTTCTTTGTACTTAAGTGTTAAAGTGAGTTGTCTAAAACGCGTT-TTTTAATTAGAAAACTAATT-TTTAAGTAGAGTAACA-AAGTGAGTCCAGC------GGAGTCCACTTCTGAAACCTATTGAGATTTGTAGAGTA---CTAAATTCTTTSizeHit CountTotal NormTotal
No Reads
droBia1
TTCC--TTAAAAC-T--------------------------------------------------------------------------TAAA-AGC---------------------T------AAAAAAAAGTGTG--AAATTGA----TCAA--ATT-AA-----GTG-CTG--------TTTTTGAAATGCAGTCCATAAAGAGTGGTTTGTATTATGTGTTTGTGATCGTGATTTTTAGATTTTTATTGTGGTGTCCCTTTAATCTTGTGTAAGTTCTAACCTTAAAAAAACTTAAAACATGTAGTAAATTATAATC-TTTAAATAGAGCTACA-AAGTGAGTCC-------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
ACTATTTAATTG--C--------------------------------------------------------------------------TA-AA----------------------------------AATAAGAG--TCTTA--A-AGCA-----ATTT-AA-----GTG-GAG--------TTTTTTTAATTAATTCAAAGGATGGTAGTGTCCACAACGTATTTGTGTGATTAAACAATCTAAATTAATCGTGATTTTCTTGAAATCGATTATTTTTGTGACCGGCCTAACACGAAT--ATTTTTAAAGAAAACCAATT-TTTAAATAGAGATACA-AAGCGAGTCCAGC------GGAGTCCATCCATCAAACCTTTG-GGAATTAAAGAGTA---AGGAATTCTCTSizeHit CountTotal NormTotal
No Reads
droEug1
TGAT--ACTTTCA-AAA-------------------------------------------------------------------------------------------------------------AGAGAATTAGTT--AAAAAAA----ACAAAT-TTTAA-----ATT-AAA--------T--TTTTGATGAGTTCTAAGCAATGGGGTTTGTACTACGTGTTTTGTAATGTGAAATGTTTCAAGCCGTTTTGATGTCTTCGTAGTTATATGTAAAAGTAAGTCGTCTAACAAGTGTAATATTGAAACTAAATCTCATT-TTCGAAAAGGTGTACA-AAGTGAGTCCAAC------CTAGTCCAACCCTGAAACCTTTTGTGTGTCGTAGAGTA---ACCAATTCTTGSizeHit CountTotal NormTotal
No Reads
droSim2
TTTT--TCCCTTG-ACA-------------------------------------------------------------------------------------------------------------CAAATATTT-----TAA--T-ATCT-----TTTT-AACCAAAGCG-TTGTTTTTCATTCTGCAAAATGAGTTATATTCAGTGTGGTTTATATTATGTGTTTGTGACTGTCAAAACTAAC-AAAAATCGTGTTGTCCCCTTAATACCGTCAAAATGTAAGTCGTCTGACTAAAATATTTTTGTGATATAAACTTAAC-CTTTAAAAGGGATTTA-AAGTGAATGCAGC------AAAA------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droYak3
TCGC--TGAAAAA-TCG------------------------------------------------------------------------TACA-AGT---------------------TTGAAGTGACAAAAAGTGCA--TAAACAA----TTAT--CAA-AA-----GTG-TTA--------CTTATAATATGAAGTCGAATCCTTGTGGTTTTTAATATGTGTTTGTGATCTTCGAATGT------TAGCTGTGGTGTCCCAATAATCTTCAGTAAGTTTTAACCCTTATAAAAAACAACTTTTGTAGTGTATTCTAATT-TTTAAATAGAGCTACA-AAGTGAGTCCGGC------C---------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................................................................................................................................................................GTGTTTGTGATCTTCGAATGT------TAGCT..............................................................................................................................................................2612.00200200000000
...........................................................................................................................................................................................TAATATGAAGTCGAATCCTTGTGGT.......................................................................................................................................................................................................2512.00202000000000
......................................................................................................................................................................................................................................................................................................................................AAATAGAGCTACA-AAGTGAGTCCGGC------C---------------------------------------------------2711.00101000000000
............................................................................................................................................................................................................................................................................................ACCCTTATAAAAAACAACTTTTGTAG.....................................................................................................2611.00101000000000
.....................................................................................................................................................................................................................................GATCTTCGAATGT------TAGCTGTGGT.........................................................................................................................................................2311.00101000000000
....................................................................................................................................................................................................................................TGATCTTCGAATGT------TAGCTGTGGTG........................................................................................................................................................2511.00101000000000
.............................................................................................................................................................................................................................GTGTTTGTGATCTTCGAATGT------TAGC...............................................................................................................................................................2511.00101000000000
.............................................................................................................................................................................TA--------CTTATAATATGAAGTCGAATCCTTG...........................................................................................................................................................................................................2711.00101000000000
.........................................................................................................................................................................................................................................TTCGAATGT------TAGCTGTGGTGTCCC....................................................................................................................................................2411.00100100000000
.........................................................................................................................................................................................................................................TTCGAATGT------TAGCTGTGGTGTCCCA...................................................................................................................................................2511.00101000000000
.....................................................................................................................................................................................................................................................................................................................................TAAATAGAGCTACA-AAGTGAGTCCGGC------C---------------------------------------------------2811.00100100000000
..............TCG------------------------------------------------------------------------TACA-AGT---------------------TTGAAGTGACAAAAAG.....................................................................................................................................................................................................................................................................................2621.00202000000000
.........................................................................................................................................................................................TATAATATGAAGTCGAATCCTTGTGG........................................................................................................................................................................................................2611.00100010000000
.....................................................................................................................................................................................................................................................................................................................GTGTATTCTAATT-TTTAAATAGAGC............................................................................25160.13202000000000
.........................................................................................TACA-AGT---------------------TTGAAGTGACAAAAAGTGCA--...............................................................................................................................................................................................................................................................................27100.10101000000000
..........................................................................................................................AGTGACAAAAAGTGCA--TAAACAA----TTAT--..............................................................................................................................................................................................................................................................27110.09101000000000
.......................................................................................................................................................................................................................................................................................................................................AATAGAGCTACA-AAGTGAGTCCGGC------....................................................25110.09101000000000
.....................................................................................................................................................................................................................................................................................................................GTGTATTCTAATT-TTTAAATAGAGCT...........................................................................26120.08100000010000
.............................................................................................................................GACAAAAAGTGCA--TAAACAA----T...................................................................................................................................................................................................................................................................21130.08101000000000
......................................................................................................................................................................................................................................................................................................................TGTATTCTAATT-TTTAAATAGAGC............................................................................24170.06101000000000
................................................................................................................................................................................................................TGGTTTTTAATATGTGTTTGTGATC..................................................................................................................................................................................25170.06100100000000
.......................................................................................................................................................................................................................TAATATGTGTTTGTGATCTTCGAATGT------...................................................................................................................................................................27180.06101000000000
............................................................................................................................................................................................................................................................................................................ACTTTTGTAGTGTATTCTAATT-T.......................................................................................23200.05101000000000

Generated: 06/08/2015 at 04:32 PM