ID:

dpe_1698

 Coordinate:

scaffold_45:440166-440316 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-35.2 -35.0 -34.9

Flybase annnotation

exon [dper_GLEANR_7911:7]; CDS [Dper\GL25419-cds]; intron [Dper\GL25419-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GATAACCAGCACTACTGTGTCGGTTGAGGTGATGGCCCGAGAACCGGTAAGTGAGTCCTCCAACTTCACGCCCGGCTAATGGCCCTTGACAACCGGGGGTTGGAACAATGATGTGCCTAGACAATGGATAAGGACAAGGACAAGGGCTTTACGAGGAGAAGAGTACGAGTACTAGCAAAAGACGGAATCTCCGGCTGTAATTAGCCGGTTTTGCCCGTCCACCCATCCGACCACATTGATTGCCAATCAAC
**************************************************((.(((.(((..((((....((((......((((((((.(((((...))))).........(((.(((............))))))....))))))))...)).))....))))..))).))).))...((.((((...)))).)).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total V057
head
 M021
embryo
 V050
head
 V042
embryo
......................................................................................................................................CAAGGACAAGGGCTTTACGAGGA.............................................................................................. 23 0 1 2.00 2 0 2 0 0
................................TGGCCGGAGAACTGCTAAGTG...................................................................................................................................................................................................... 21 3 3 1.00 3 3 0 0 0
..........................................................................................................AATGATGTGGCTAGACAATG............................................................................................................................. 20 1 1 1.00 1 0 0 0 1
.....................................................................................................................TAGACAATGGATAAGGACAAGGG............................................................................................................... 23 1 1 1.00 1 0 1 0 0
................................TGGACCGAGAACCGGTAAGCG...................................................................................................................................................................................................... 21 2 1 1.00 1 0 0 1 0
.......................................................................................................................GACAATCGATGAGCACAAGGAC.............................................................................................................. 22 3 1 1.00 1 0 1 0 0
................................TGGCCGGAGAACTGATAAGTGA..................................................................................................................................................................................................... 22 3 3 0.67 2 1 0 1 0
................................TGGCCGGAGAACTGGTAAGTGC..................................................................................................................................................................................................... 22 3 4 0.50 2 2 0 0 0
................................TGGACCGAGAACTGGCAAGTG...................................................................................................................................................................................................... 21 3 2 0.50 1 1 0 0 0
................................TGGACCGAGAACTGGTAAGTGC..................................................................................................................................................................................................... 22 3 2 0.50 1 1 0 0 0
................................TGGCCCGAGAACTGCTAAGGG...................................................................................................................................................................................................... 21 3 2 0.50 1 1 0 0 0
................................TGGACCGTGAACTGGTAAGTG...................................................................................................................................................................................................... 21 3 3 0.33 1 1 0 0 0
................................TGGACCGAGAACCGATGAGTG...................................................................................................................................................................................................... 21 3 3 0.33 1 1 0 0 0
................................TGTACGGAGAACCGGTAAGTG...................................................................................................................................................................................................... 21 3 3 0.33 1 1 0 0 0
................................TGGTCCGAGAACGGATAAGTG...................................................................................................................................................................................................... 21 3 3 0.33 1 1 0 0 0
................................TGGACTGAGAACCGATAAGTG...................................................................................................................................................................................................... 21 3 4 0.25 1 1 0 0 0
................................TGGTCCGAGAACTGATAAGTG...................................................................................................................................................................................................... 21 3 4 0.25 1 1 0 0 0
................................TGGCCGGAGAACTAGTAAGTG...................................................................................................................................................................................................... 21 3 4 0.25 1 1 0 0 0
................................TGGGCCGAGAACTGATAAGTG...................................................................................................................................................................................................... 21 3 4 0.25 1 1 0 0 0
................................TGGCCGGAGAACCGCTAAGGG...................................................................................................................................................................................................... 21 3 4 0.25 1 0 0 1 0
................................TGGACTGAGAACTGGTAAGTG...................................................................................................................................................................................................... 21 3 5 0.20 1 1 0 0 0
................................TGGCCGGAGGACTGGTAAGTG...................................................................................................................................................................................................... 21 3 5 0.20 1 1 0 0 0
................................TGGTCCGAGAACTGATAAGT....................................................................................................................................................................................................... 20 3 6 0.17 1 1 0 0 0
................................TGGTCGGAGAACCGCTAAG........................................................................................................................................................................................................ 19 3 7 0.14 1 1 0 0 0
...AACCAGGACTAATGTTTCG..................................................................................................................................................................................................................................... 19 3 17 0.06 1 1 0 0 0

Anti-sense strand reads

CTATTGGTCGTGATGACACAGCCAACTCCACTACCGGGCTCTTGGCCATTCACTCAGGAGGTTGAAGTGCGGGCCGATTACCGGGAACTGTTGGCCCCCAACCTTGTTACTACACGGATCTGTTACCTATTCCTGTTCCTGTTCCCGAAATGCTCCTCTTCTCATGCTCATGATCGTTTTCTGCCTTAGAGGCCGACATTAATCGGCCAAAACGGGCAGGTGGGTAGGCTGGTGTAACTAACGGTTAGTTG
**************************************************((.(((.(((..((((....((((......((((((((.(((((...))))).........(((.(((............))))))....))))))))...)).))....))))..))).))).))...((.((((...)))).)).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total V057
head
 M042
female body
 M021
embryo
...........................................................................................................................................................................................................CGGCCAAAGCGAGCAGGTAG............................ 20 3 3 0.33 1 1 0 0
....TGGTCTGGAGGACACAGCC.................................................................................................................................................................................................................................... 19 3 4 0.25 1 1 0 0
....TGGTCAGGTTGACACAGCCA................................................................................................................................................................................................................................... 20 3 4 0.25 1 0 1 0
.....................................................TCAGGAGGTTAAACTGCG.................................................................................................................................................................................... 18 2 5 0.20 1 0 0 1
....TGGTCGGGCGGACACAGCC.................................................................................................................................................................................................................................... 19 3 8 0.13 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_45:440116-440366 - dpe_1698 GATAACCAGCACTACTGTGTCGGTTGAGGTGATGGCCCGAGAACCGGTAAGTGAG-TCCTCCAACTTCAC-GCCCGGCTAA------TGGCCCTTGACAACCGGGGGTT---GGAACAATGATGTGCCT---AG----ACAATGGATAAGGAC--AAGGACAAGGG--CTT-------TA--C----GAGGAGAAGA---------GTACGAGTACTAGCAAAAGACGGAATCTCCGGC---------TGTAATTAGCCGGTTTTGCCCGTCCACCC--------------ATCCGACCACATTGATTGCCAATCAAC
dp5 XR_group8:6043783-6044032 + dps_3341 G-AGAACACCAATACTGTGTCCGTTGAGGTGATGGC-CGAGAAC-GGTAAGTGAG-TCCTCGACTCAATCC----GGCTTA------TGGCCA-TGACAACGGGG----GTTG-CACAATGATGTGGCT---AG----ACAATGGATAAGGAC--AAGGACAAGGG--CTT-------TA--C----GAGGAGAAGAGTACGAAGAGTACGAGTACTAGCAAAAGACGGAATCTCCGGC---------TGTAATTAGC-GGTTTTGCCCGTCCACCC--------------ATCCGACCACATTGATTGCCAATCAAC
droWil2 scf2_1100000004762:1846496-1846548 - GGAAAGTGCCAATTCAGTGCCCGTCGAAGTGATGGC-CGAGAAC-GGTGAGTCT-------------------------T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13049:20938117-20938167 + GGAGGGCAGCAATACCGTGCCCGTCGAGGTGATGGC-CGAGAAT-GGTAAGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6680:15292407-15292467 + G-AGAGCGCCAACACCATACCCGTCGAGGTGATGGC-CGAGAAC-GGTAAGTGT-------------------------TG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCCAAC
droGri2 scaffold_15110:22761161-22761212 - AGAGAGCGCCAATACGGTGCCAGTCGAAGTGATGGC-AGAGAAT-GGTAAGTAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13337:21104210-21104427 + G-AGAGCTCCAACGCCGTTCCCGTCGAGGTGATGGC-CGAGAAC-GGTGAGTGGA-CCACAGGG--AGTG------GCTT-------------------AAAGGATAATGACG-GAGAATGATGTGGCT---AGTTGTAGAGTAGGAAAAGGC-TTAG--ATAGC-ATCAG-------AGAGGTCTT------------------------------------------------C-GCTGCAA--AGCATAATTAGC-CGTTTCGGTGACGGG--CATCTCTTCGGCAATGTCCAACCGCATTGATTGCCAATCATC
droBip1 scf7180000396707:325931-326148 - G-AAAGCTCCAACGCCGTGCCCGTCGAGGTGATGGC-CGAGAAC-GGTGAGTGGA-CCGCAGGG--AGTG------GCTT-------------------AAAGGATAATGACG-GAGAATAATGTGGCT---AGTGGTAGAGTAGGAAAAGGC-TTAG--ATAGC-ATCAG-------TGGGGTCTT------------------------------------------------C-GCTGCGA--AACATAATTAGC-GGTTTCGGTGACGGT--CATCTCTACAGCCACGTCCAACCGCATTGATTGCCAATCATC
droKik1 scf7180000302441:2092411-2092594 - G-AGAGTGCCAACACGGTGCCCGTCGAGGTGATGGC-AGAGAAT-GGTGAGTGGAGGACTCGGATGAGTG------GC-------------CA-GGATGAAAGGATAATAACG-GAGAATGATGTGGCT---GA----ACCAGGGAAAGAG----------------------------------------------------------------------------------------CAGAGCTCGCATAATTAGC-GGTTTTGCCAGGGGCCTC--------------ATCTAGCCACATCGATTGCCAATTAAC
droFic1 scf7180000453945:126953-127134 + G-AGAGCGCCAACACAGTGCCCGTGGAGGTGATGGC-CGAGAAC-GGTGAGTGGA-CCGCAGGGGAAGTG------GCTTA----------------CGAAGGGATAATGACG-GAGAATAATGCG--------------------AAGGGGC-TTGG--GG------------------AGCTCCT------------------------------------------------C-AGTGGAG--CACGTAATTAGC-GGTTTTGCGAAGGTT--C--------------TTCCAGCCACATCGATGCCCAATCATC
droEle1 scf7180000491199:864142-864357 - G-AGAGCGCCAACACGGTGCCCGTCGAGGTGATGGC-CGAGAAT-GGTGAGTGGA-CCGCAGGGATAATTG----AACTTA------GAGCC--GGGCGAAAGGATAATGGCG-GCGAATTGTGTGGCT---AG----ACAATGAAAAGCGGT-TTAG--GCGGCGAGCAC-------TCAGCTCTC------------------------------------------------A-AGTGGAG--CGCATAATTAGC-GGTTTAGCGTGCCCA--C--------------CTGCCACCGCATCGATGGCCAATCATC
droRho1 scf7180000759602:19632-19841 + G-AGAGCGCCAACACGGTGCCCGTCGAGGTGATGGC-CGAGAAC-GGTGAGTGGA-CCGCAGAGAAAATG------GCTTA------CAGCCA-AAGCGAAAGGATAATGACG-GAGAATGATGTGGCT---AG----ACAATGAAAAGAGGC-TTGG-GCGAG----CAC-------TCAGCTCTC------------------------------------------------A-AGTGGGG--CGCATAATTAGC-GGTTTTG--AACGGA--A--------------CAGCCCCCACTTCGATGGCCAATCATC
droBia1 scf7180000302377:1313441-1313639 - G-AGAGCGCCAACGCCGTACCCGTCGAGGTGATGGC-CGAGAAC-GGTGAGTGGA-CCGCAGGGGAAATG------GCTTA------TGGCT--GGGCGAAAGGATAATGACG-GAGAATGATGTGGCC---AG----ACAATGGAAAGAGGT-TTAG--GGAGGG--CTC-------T--ACT--------------------------------------------------------------CGCATAATTAGC-GGTTTTGTGAGCGGG--T--------------TTCCGCCCACATCGATGGCCAATCATC
droTak1 scf7180000414002:118751-118963 + G-AGAGCGCCAATGCCGTGCCCGTGGAGGTGATGGC-CGAGAAC-GGTGAGTGGA-CCGCAGAGAAAATG------GCTTG------TAGTCA-GGACGAAAGGATAATGACA-GAGAATGATGTGGCC---AG----ACAATGAAAAGAGGT-TTAG--GAAGCG--TGC-------TCAGCTCGC------------------------------------------------A-AGTGGGG--CGCATAATTAGC-GGTTTTGCGAACGGG--C--------------TTCCAGCCGCATCGATGGCCAATCATC
droEug1 scf7180000409472:806196-806415 + G-AGAGCGCCAACGCAGTGCCGGTGGAGGTGATGGC-CGAGAAC-GGTGAGTGGA-CCGCAAAGAAAATG------GCTTA------TAGCCA-AGGCGAAAGGATAATGACG-GAGAATGATGTGGCC---AG----ACAATGAAAAGAGGT-TTAG--CAAGGG--CTCTCGGCTCTCAGCTCCC------------------------------------------------A-AGTGGGG--CGCATAATTAGC-GGTTTTGTGAAAGGG--C--------------TTCCAGCCACATCGATGGCCAATCATC
dm3 chr3L:21970688-21970896 + G-AGAGCGCCAATGCAGTGCCAGTCGAGGTGATGGC-CGAGAAC-GGTGAGTGGA-CCGCAGGGCAAATG------GCTTA------TA-----GGATGACAGGATAATGACG-GAGAATGATGTGGCC---AG----ACAATGAAAAGAGGT-TTAG--TAAGGG--CTT-------TCAGCTCTC------------------------------------------------A-AGTAGGG--CGCATAATTAGC-GGTTTTGGAAACGAG--C--------------TTCCAAGCACATCGATGGCCAATCAAC
droSim2 3l:21485881-21486089 + dsi_465 G-AGAGCGCCAATGCAGTGCCCGTCGAGGTGATGGC-CGAGAAC-GGTGAGTGGA-CCGCAGGGCAAATG------GCTTA------TA-----GGACGACAGGATAATGACG-GAGAATGATGTGGCC---AG----ACAATGAAAAGAGGT-TTAG--CAAGGG--CTT-------TCAGCTCTC------------------------------------------------A-AGTAGGG--CGCATAATTAGC-GGTTTTGCAAACGGG--C--------------ATCCAACCACATCGATGGCCAATCATC
droSec2 scaffold_11:1896276-1896484 + G-AGAGCGCCAATGCAGTGCCCGTCGAGGTGATGGC-CGAGAAC-GGTGAGTGGA-CCGCAGGGCAAATG------GCTTA------TA-----GGACGACAGGATAATGACG-GAGAATGATGTGGCC---AG----ACAATGAAAAGAGGT-TTAG--CAAGGG--CTT-------TCAGCTCTC------------------------------------------------A-AGTAGGG--CGCATAATTAGC-GGTTTTGCAAACGGG--C--------------ATCCAACCACATCGATGGCCAATCATC
droYak3 v2_chr3L_random_302:6823-7037 + G-AGAGCGCCAATGCAGTGCCCGTCGAGGTGATGGC-CGAGAAC-GGTGAGTGGA-CCGCAGGACAAATG------GCTTA------TG-----GGGCGAAAGGATAATGACG-GAGAATGATGTGGCC---AG----ACAATGACAAAACCTCTTTT--CAAGGG--CTTTCTGCTTTCTGCTCTC------------------------------------------------A-AGTAAAG--CGCATAATTAGC-GGTTTTGCAAATGGG--C--------------TTCCAACCACATCGATGGCCAATCA--
droEre2 scaffold_4784:21645556-21645771 + G-AGAGCGCCAATGCAGTGCCCGTCGAGGTGATGGC-CGAGAAC-GGTAAGTGGA-CCGCAGGGCGAATG------GCTTGCGAGTGTA-----GGACGAAAGGATAATAGCG-GAGAATGATGTGGATGCCAG----ACAATGAAAAGAGGT-TTAG--CAAGGC--CTT-------TAAGCTCTC------------------------------------------------C-AGTTGGG--CGCATAATTAGC-GGTTTTGCGAACGGG--C--------------T--CCACCACGCCGATGGCCAATCATC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
GATAACCAGCACTACTGTGTCGGTTGAGGTGATGGCCCGAGAACCGGTAAGTGAG-TCCTCCAACTTCAC-GCCCGGCTAA------TGGCCCTTGACAACCGGGGGTT---GGAACAATGATGTGCCT---AG----ACAATGGATAAGGAC--AAGGACAAGGG--CTT-------TA--C----GAGGAGAAGA---------GTACGAGTACTAGCAAAAGACGGAATCTCCGGC---------TGTAATTAGCCGGTTTTGCCCGTCCACCC--------------ATCCGACCACATTGATTGCCAATCAACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................................................C--AAGGACAAGGG--CTT-------TA--C----GAGGA..............................................................................................................................2312.002200000
................................................................................................................................T---AG----ACAATGGATAAGGAC--AAGGG..............................................................................................................................................................2311.001100000
dp5
G-AGAACACCAATACTGTGTCCGTTGAGGTGATGGC-CGAGAAC-GGTAAGTGAG-TCCTCGACTCAATCC----GGCTTA------TGGCCA-TGACAACGGGG----GTTG-CACAATGATGTGGCT---AG----ACAATGGATAAGGAC--AAGGACAAGGG--CTT-------TA--C----GAGGAGAAGAGTACGAAGAGTACGAGTACTAGCAAAAGACGGAATCTCCGGC---------TGTAATTAGC-GGTTTTGCCCGTCCACCC--------------ATCCGACCACATTGATTGCCAATCAACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........AATACTGTGTCCGTTGAGGTGAT.............................................................................................................................................................................................................................................................................................2312.0020100100000
.......ACCAATACTGTGTCCGTT.....................................................................................................................................................................................................................................................................................................1811.0010000100000
......................GTTGAGGTGATGGC-CGAGA....................................................................................................................................................................................................................................................................................1911.0010100000000
..............CTGTGTCCGTTGAGGTGATGGC-C........................................................................................................................................................................................................................................................................................2311.0010000100000
.....................CGTTGAGGTGATGGC-CGAGAA...................................................................................................................................................................................................................................................................................2111.0010100000000
..................GTCCGTTGAGGTGATGGC-C........................................................................................................................................................................................................................................................................................1911.0010100000000
.....................CGTTGAGGTGATGGC-CGAGAAC-.................................................................................................................................................................................................................................................................................2211.0010100000000
................GTGTCCGTTGAGGTGATGGG-.........................................................................................................................................................................................................................................................................................2011.0010000100000
.............ACTGTGTCCGTTGAGGTGATGGC-CG.......................................................................................................................................................................................................................................................................................2511.0010100000000
...........ATACTGTGTCCGTTGAGGTGATGGC-.........................................................................................................................................................................................................................................................................................2511.0010000100000
................GTGTCCGTTGAGGTGATGGC-CG.......................................................................................................................................................................................................................................................................................2211.0010100000000
..........................................................................................................................................................................................................................GCAAAAGACGGAATCTCCGGC---------T.....................................................................2211.0010000100000
........................................................................................................................................................C--AAGGACAAGGG--CTT-------TA--C----GAGGA..............................................................................................................................2311.0010100000000
................................................................................................................................................................CAAGGG--CTT-------TA--C----GAGGAGA............................................................................................................................1911.0010100000000
...........ATACTGTGTCCGTTGAGGT................................................................................................................................................................................................................................................................................................1911.0010100000000
................................................................................................................................................GATAAGGAC--AAGGAC.............................................................................................................................................................1570.1410000000001
droWil2
GGAAAGTGCCAATTCAGTGCCCGTCGAAGTGATGGC-CGAGAAC-GGTGAGTCT-------------------------T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........AATTCAGTGCCCGTCGAAGTGATGGC-.........................................................................................................................................................................................................................................................................................2612.00200200
...........ATTCAGTGCCCGTCGAAGTGAT.............................................................................................................................................................................................................................................................................................2212.00200020
........CCAATTCAGTGCCCGTCGAAGT................................................................................................................................................................................................................................................................................................2211.00100010
.........CAATTCAGTGCCCGTCGAA..................................................................................................................................................................................................................................................................................................1911.00100010
...........ATTCAGTGCCCGTCGAAGTGATG............................................................................................................................................................................................................................................................................................2311.00100100
......................GTCGAAGTGATGGC-CGAGAA...................................................................................................................................................................................................................................................................................2011.00100010
..............CAGTGCCCGTCGAAGTGATGGC-CGAGAAC-.................................................................................................................................................................................................................................................................................2911.00100100
...................CCCGTCGAAGTGATGGC-CGAGA....................................................................................................................................................................................................................................................................................2211.00100010
.............TCAGTGCCCGTCGAAGTGATGGC-.........................................................................................................................................................................................................................................................................................2311.00100100
........................CGAAGTGATGGC-CGAGAAC-.................................................................................................................................................................................................................................................................................1911.00100010
..AAAGTGCCAATTCAGTGC..........................................................................................................................................................................................................................................................................................................1811.00100010
..........AATTCAGTGCCCGTCGAAGTGAT.............................................................................................................................................................................................................................................................................................2311.00100100
..........................AAGTGATGGC-CGAGAAC-GC...............................................................................................................................................................................................................................................................................1911.00100100
...........ATTCAGTGCCCGTCGAAGTGATGGC-C........................................................................................................................................................................................................................................................................................2611.00100100
.........CAATTCAGTGCCCGTCGAAGTGAT.............................................................................................................................................................................................................................................................................................2411.00100100
......................GTCGAAGTGATGGC-CGAGA....................................................................................................................................................................................................................................................................................1911.00100100
..........AATTCAGTGCCCGTCGAAGTGATGGC-C........................................................................................................................................................................................................................................................................................2711.00100100
...........................AGTGATGGC-CGAGAAC-CTC..............................................................................................................................................................................................................................................................................19200.05100010
droVir3
GGAGGGCAGCAATACCGTGCCCGTCGAGGTGATGGC-CGAGAAT-GGTAAGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......AGCAATACCGTGCCCGTCGAGGTG...............................................................................................................................................................................................................................................................................................2414.004002100000000000000100000000000000000000000000000000000000000000
......CAGCAATACCGTGCCCGTCGAGGTG...............................................................................................................................................................................................................................................................................................2513.003002100000000000000000000000000000000000000000000000000000000000
...............CGTGCCCGTCGAGGTGATGGC-C........................................................................................................................................................................................................................................................................................2212.002000000000000000000000010000000000000000000000000000000000001000
.......AGCAATACCGTGCCCGTCGAGGT................................................................................................................................................................................................................................................................................................2312.002001000000000000000000000000000000000000000000000000000000000010
..........AATACCGTGCCCGTCGAGGT................................................................................................................................................................................................................................................................................................2012.002001000000000000000100000000000000000000000000000000000000000000
..........AATACCGTGCCCGTCGAGGTGATGGC-C........................................................................................................................................................................................................................................................................................2712.002000000000000001001000000000000000000000000000000000000000000000
......CAGCAATACCGTGCCCGTC.....................................................................................................................................................................................................................................................................................................1912.002001000000000000000000000000000000000000000000000000000000001000
.......AGCAATACCGTGCCCGTCGAGGTGAT.............................................................................................................................................................................................................................................................................................2611.001000000000000000100000000000000000000000000000000000000000000000
.....GCAGCAATACCGTGCCCGTCGAGGT................................................................................................................................................................................................................................................................................................2511.001000000000000000100000000000000000000000000000000000000000000000
......CAGCAATACCGTGCCCGTCGAGGTGA..............................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000001000
..................GCCCGTCGAGGTGATGGC-C........................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.....GCAGCAATACCGTGCCCGTCGAGGTGA..............................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000001000
.........CAATACCGTGCCCGTCGAGGT................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
..........AATACCGTGCCCGTCGAGGTGA..............................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.......AGCAATACCGTGCCCGTC.....................................................................................................................................................................................................................................................................................................1811.001000000000000000100000000000000000000000000000000000000000000000
..........AATACCGTGCCCGTCGAGGTGAT.............................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
....GGCAGCAATACCGTGCCCGTCGAGGT................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
...............CGTGCCCGTCGAGGTGATG............................................................................................................................................................................................................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
.....GCAGCAATACCGTGCCCGTC.....................................................................................................................................................................................................................................................................................................2011.001000000000000000000000100000000000000000000000000000000000000000
.....GCAGCAATACCGTGCCCGTCGAGGTG...............................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000001000
......CAGCAATACCGTGCCCGTCGAGG.................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000001000000000000000000000000000000000
....GGCAGCAATACCGTGCCCGT......................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..AGGGCAGCAATACCGTGCCCGTCGAGGT................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
.......AGCAATACCGTGCCCGTCGAG..................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...............CGTGCCCGTCGAGGTGATGGC-CGAGAA...................................................................................................................................................................................................................................................................................2711.001000000000000000100000000000000000000000000000000000000000000000
...........ATACCGTGCCCGTCGAGGTG...............................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000001000
droMoj3
G-AGAGCGCCAACACCATACCCGTCGAGGTGATGGC-CGAGAAC-GGTAAGTGT-------------------------TG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCCAACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........CAACACCATACCCGTCGAGGT................................................................................................................................................................................................................................................................................................2112.002000002
.....................CGTCGAGGTGATGGC-CGAGAAC-.................................................................................................................................................................................................................................................................................2211.001100000
.......................TCGAGGTGATGGC-CGAGA....................................................................................................................................................................................................................................................................................1811.001001000
.....GCGCCAACACCATACCCGTCGAGGT................................................................................................................................................................................................................................................................................................2511.001000100
...............CATACCCGTCGAGGTGATGGC-CGA......................................................................................................................................................................................................................................................................................2411.001100000
..........AACACCATACCCGTCGAGGT................................................................................................................................................................................................................................................................................................2011.001100000
.................TACCCGTCGAGGTGATGGC-CGAGAAC-.................................................................................................................................................................................................................................................................................2611.001100000
.........CAACACCATACCCGTCGAGGTGAT.............................................................................................................................................................................................................................................................................................2411.001100000
......................GTCGAGGTGATGGC-CGAG.....................................................................................................................................................................................................................................................................................1811.001100000
........................CGAGGTGATGGC-CGAGAAC-.................................................................................................................................................................................................................................................................................1911.001100000
droGri2
AGAGAGCGCCAATACGGTGCCAGTCGAAGTGATGGC-AGAGAAT-GGTAAGTAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
G-AGAGCTCCAACGCCGTTCCCGTCGAGGTGATGGC-CGAGAAC-GGTGAGTGGA-CCACAGGG--AGTG------GCTT-------------------AAAGGATAATGACG-GAGAATGATGTGGCT---AGTTGTAGAGTAGGAAAAGGC-TTAG--ATAGC-ATCAG-------AGAGGTCTT------------------------------------------------C-GCTGCAA--AGCATAATTAGC-CGTTTCGGTGACGGG--CATCTCTTCGGCAATGTCCAACCGCATTGATTGCCAATCATCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................GTTCCCGTCGAGGTGATGGC-C........................................................................................................................................................................................................................................................................................2113.003000030
.....................CGTCGAGGTGATGGC-CGAGAAC-G................................................................................................................................................................................................................................................................................2311.001100000
................GTTCCCGTCGAGGTGATGGC-.........................................................................................................................................................................................................................................................................................2011.001000001
.....GCTCCAACGCCGTTCCCGTCGAGGT................................................................................................................................................................................................................................................................................................2511.001000100
......................GTCGAGGTGATGGC-CGAGAAC-GCA..............................................................................................................................................................................................................................................................................2411.001100000
G-AGAGCTCCAACGCCGTTCC.........................................................................................................................................................................................................................................................................................................2011.001010000
...GAGCTCCAACGCCGTTCCCGTCGA...................................................................................................................................................................................................................................................................................................2411.001100000
......................GTCGAGGTGATGGC-CGAGAAC-G................................................................................................................................................................................................................................................................................2211.001100000
.......TCCAACGCCGTTCCCGTCGAGGTGAT.............................................................................................................................................................................................................................................................................................2611.001100000
..................TCCCGTCGAGGTGATGGC-CGAG.....................................................................................................................................................................................................................................................................................2211.001000001
................GTTCCCGTCGAGGTGATGGC-CGAGAAC-.................................................................................................................................................................................................................................................................................2711.001001000
....................CCGTCGAGGTGATGGC-CGAGAA...................................................................................................................................................................................................................................................................................2211.001000100
...GAGCTCCAACGCCGTTCCCGTCGAGGTG...............................................................................................................................................................................................................................................................................................2811.001100000
droBip1
G-AAAGCTCCAACGCCGTGCCCGTCGAGGTGATGGC-CGAGAAC-GGTGAGTGGA-CCGCAGGG--AGTG------GCTT-------------------AAAGGATAATGACG-GAGAATAATGTGGCT---AGTGGTAGAGTAGGAAAAGGC-TTAG--ATAGC-ATCAG-------TGGGGTCTT------------------------------------------------C-GCTGCGA--AACATAATTAGC-GGTTTCGGTGACGGT--CATCTCTACAGCCACGTCCAACCGCATTGATTGCCAATCATCSizeHit CountTotal NormTotal
No Reads
droKik1
G-AGAGTGCCAACACGGTGCCCGTCGAGGTGATGGC-AGAGAAT-GGTGAGTGGAGGACTCGGATGAGTG------GC-------------CA-GGATGAAAGGATAATAACG-GAGAATGATGTGGCT---GA----ACCAGGGAAAGAG----------------------------------------------------------------------------------------CAGAGCTCGCATAATTAGC-GGTTTTGCCAGGGGCCTC--------------ATCTAGCCACATCGATTGCCAATTAACSizeHit CountTotal NormTotal
No Reads
droFic1
G-AGAGCGCCAACACAGTGCCCGTGGAGGTGATGGC-CGAGAAC-GGTGAGTGGA-CCGCAGGGGAAGTG------GCTTA----------------CGAAGGGATAATGACG-GAGAATAATGCG--------------------AAGGGGC-TTGG--GG------------------AGCTCCT------------------------------------------------C-AGTGGAG--CACGTAATTAGC-GGTTTTGCGAAGGTT--C--------------TTCCAGCCACATCGATGCCCAATCATCSizeHit CountTotal NormTotal
No Reads
droEle1
G-AGAGCGCCAACACGGTGCCCGTCGAGGTGATGGC-CGAGAAT-GGTGAGTGGA-CCGCAGGGATAATTG----AACTTA------GAGCC--GGGCGAAAGGATAATGGCG-GCGAATTGTGTGGCT---AG----ACAATGAAAAGCGGT-TTAG--GCGGCGAGCAC-------TCAGCTCTC------------------------------------------------A-AGTGGAG--CGCATAATTAGC-GGTTTAGCGTGCCCA--C--------------CTGCCACCGCATCGATGGCCAATCATCSizeHit CountTotal NormTotal
No Reads
droRho1
G-AGAGCGCCAACACGGTGCCCGTCGAGGTGATGGC-CGAGAAC-GGTGAGTGGA-CCGCAGAGAAAATG------GCTTA------CAGCCA-AAGCGAAAGGATAATGACG-GAGAATGATGTGGCT---AG----ACAATGAAAAGAGGC-TTGG-GCGAG----CAC-------TCAGCTCTC------------------------------------------------A-AGTGGGG--CGCATAATTAGC-GGTTTTG--AACGGA--A--------------CAGCCCCCACTTCGATGGCCAATCATCSizeHit CountTotal NormTotal
No Reads
droBia1
G-AGAGCGCCAACGCCGTACCCGTCGAGGTGATGGC-CGAGAAC-GGTGAGTGGA-CCGCAGGGGAAATG------GCTTA------TGGCT--GGGCGAAAGGATAATGACG-GAGAATGATGTGGCC---AG----ACAATGGAAAGAGGT-TTAG--GGAGGG--CTC-------T--ACT--------------------------------------------------------------CGCATAATTAGC-GGTTTTGTGAGCGGG--T--------------TTCCGCCCACATCGATGGCCAATCATCSizeHit CountTotal NormTotal
No Reads
droTak1
G-AGAGCGCCAATGCCGTGCCCGTGGAGGTGATGGC-CGAGAAC-GGTGAGTGGA-CCGCAGAGAAAATG------GCTTG------TAGTCA-GGACGAAAGGATAATGACA-GAGAATGATGTGGCC---AG----ACAATGAAAAGAGGT-TTAG--GAAGCG--TGC-------TCAGCTCGC------------------------------------------------A-AGTGGGG--CGCATAATTAGC-GGTTTTGCGAACGGG--C--------------TTCCAGCCGCATCGATGGCCAATCATCSizeHit CountTotal NormTotal
No Reads
droEug1
G-AGAGCGCCAACGCAGTGCCGGTGGAGGTGATGGC-CGAGAAC-GGTGAGTGGA-CCGCAAAGAAAATG------GCTTA------TAGCCA-AGGCGAAAGGATAATGACG-GAGAATGATGTGGCC---AG----ACAATGAAAAGAGGT-TTAG--CAAGGG--CTCTCGGCTCTCAGCTCCC------------------------------------------------A-AGTGGGG--CGCATAATTAGC-GGTTTTGTGAAAGGG--C--------------TTCCAGCCACATCGATGGCCAATCATCSizeHit CountTotal NormTotal
No Reads
dm3
G-AGAGCGCCAATGCAGTGCCAGTCGAGGTGATGGC-CGAGAAC-GGTGAGTGGA-CCGCAGGGCAAATG------GCTTA------TA-----GGATGACAGGATAATGACG-GAGAATGATGTGGCC---AG----ACAATGAAAAGAGGT-TTAG--TAAGGG--CTT-------TCAGCTCTC------------------------------------------------A-AGTAGGG--CGCATAATTAGC-GGTTTTGGAAACGAG--C--------------TTCCAAGCACATCGATGGCCAATCAACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......GCCAATGCAGTGCCAGTCGAGGT................................................................................................................................................................................................................................................................................................2316.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........ATGCAGTGCCAGTCGAGGT................................................................................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000001000000000000000000000000000000000000000000000000001100000000000000000000000000000
...........ATGCAGTGCCAGTCGAGGTGAT.............................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000001000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
........................................................................................................................................................................................................................................................................TGGAAACGAG--C--------------TTCCAAGCCT.................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000001000000000000000000000000000000000000000000000000
.......GCCAATGCAGTGCCAGTCGAGGTGAT.............................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GGTGATGGC-CGAGAAC-G................................................................................................................................................................................................................................................................................1712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TGCAGTGCCAGTCGAGGT................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
........CCAATGCAGTGCCAGTCGAGGT................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CGAGGTGATGGC-CGAGAA...................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TGCAGTGCCAGTCGAGGTGATGG...........................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..............................................GTGAGTGGA-CCGCAGGGCAAATG------G.................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000100000000
.............GCAGTGCCAGTCGAGGTGATGGC-.........................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
..........AATGCAGTGCCAGTCGAG..................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..........AATGCAGTGCCAGTCGAGGT................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000010000000
........................CGAGGTGATGGC-CGAGAAA-.................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TGCCAGTCGAGGTGATGGC-CGAGAAC-G................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
.....................AGTCGAGGTGATGGC-CGAGAAC-GCAC.............................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........ATGCAGTGCCAGTCGAGGTGATGGC-CGAG.....................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..........................AGGTGATGGC-CGAGAAC-G................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GCAGTGCCAGTCGAGGTGAT.............................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TGCAGTGCCAGTCGAGGTGATGGC-.........................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..................GCCAGTCGAGGTGATGGC-C........................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GATGGC-CGAGAAC-GGTGA............................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CGCCAATGCAGTGCCAGTCGA...................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AGAGCGCCAATGCAGTGCCAG.......................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
............................................................................................................................TGGCC---AG----ACAATGAAAAGAGG......................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.......GCCAATGCAGTGCCAGTCGAGGG................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........ATGCAGTGCCAGTCGAGGTGATGGC-.........................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
........CCAATGCAGTGCCAGTCGAG..................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GCAGTGCCAGTCGAGGT................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........ATGCAGTGCCAGTCGAGGTGA..............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............CAGTGCCAGTCGAGGTGATGGC-CGA......................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................AGTCGAGGTGATGGC-CGAGAA...................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............AGTGCCAGTCGAGGTGATGG...........................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
......................GTCGAGGTGATGGC-CGAGAAC-GCGC.............................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.........CAATGCAGTGCCAGTCGAGGT................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GCAGTGCCAGTCGAGGTGATGGC-CGAG.....................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........ATGCAGTGCCAGTCGAGGTGATG............................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........AATGCAGTGCCAGTCGAGGTGATGG...........................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
......................GTCGAGGTGATGGC-CGAGAAC-GCG..............................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...............AGTGCCAGTCGAGGTGATG............................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........CAATGCAGTGCCAGTCGAGGTGAT.............................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................TGTGGCC---AG----ACAATGAAAAGAGGT-TT..................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
G-AGAGCGCCAATGCAGTGCC.........................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CGCCAATGCAGTGCCAGTCGAGGTGAT.............................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................ATAATGACG-GAGAATGATGTG................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TGGC-CGAGAAC-GGTGAGTGGA-C.....................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................GAGAAC-GGTGAGTGGA-CCGCAGGGCA............................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........AATGCAGTGCCAGTCGAGG.................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AGAGCGCCAATGCAGTGCC.........................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.........CAATGCAGTGCCAGTCGAGGTGATGGC-.........................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GCCAATGCAGTGCCAGTCG....................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...............AGTGCCAGTCGAGGTGATGGC-C........................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
............TGCAGTGCCAGTCGAGGTGAT.............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.......................TCGAGGTGATGGC-CGAGAAC-GCGC.............................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.........................GAGGTGATGGC-CGAGAAC-GC...............................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................AAGCACATCGATGGCCAAT....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GCCAGTCGAGGTGATGG...........................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
G-AGAGCGCCAATGCAGTGCCCGTCGAGGTGATGGC-CGAGAAC-GGTGAGTGGA-CCGCAGGGCAAATG------GCTTA------TA-----GGACGACAGGATAATGACG-GAGAATGATGTGGCC---AG----ACAATGAAAAGAGGT-TTAG--CAAGGG--CTT-------TCAGCTCTC------------------------------------------------A-AGTAGGG--CGCATAATTAGC-GGTTTTGCAAACGGG--C--------------ATCCAACCACATCGATGGCCAATCATCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................GGTGATGGC-CGAGAAC-GC...............................................................................................................................................................................................................................................................................1812.00202000000000000000
...........ATGCAGTGCCCGTCGAGGTGATG............................................................................................................................................................................................................................................................................................2311.00101000000000000000
...........ATGCAGTGCCCGTCGAGGTGATGGC-.........................................................................................................................................................................................................................................................................................2511.00100100000000000000
..........AATGCAGTGCCCGTCGAGGTGA..............................................................................................................................................................................................................................................................................................2211.00100000000000100000
.......GCCAATGCAGTGCCCGTCGAGGTGAT.............................................................................................................................................................................................................................................................................................2611.00100100000000000000
..........AATGCAGTGCCCGTCGAGGT................................................................................................................................................................................................................................................................................................2011.00100010000000000000
...........................................................................................................ATGACG-GAGAATGATGTGGC..............................................................................................................................................................................................2011.00100010000000000000
..........AATGCAGTGCCCGTCGAGG.................................................................................................................................................................................................................................................................................................1911.00100010000000000000
......................................................................................................................................................GGT-TTAG--CAAGGG--CTT-------TCA.........................................................................................................................................1911.00100010000000000000
..........AATGCAGTGCCCGTCGAGGTGATG............................................................................................................................................................................................................................................................................................2411.00100000000000100000
.......GCCAATGCAGTGCCCGTCGA...................................................................................................................................................................................................................................................................................................2011.00100010000000000000
...........ATGCAGTGCCCGTCGAGGT................................................................................................................................................................................................................................................................................................1911.00100010000000000000
...................CCCGTCGAGGTGATGGC-CGAGAAC-GCAC.............................................................................................................................................................................................................................................................................2811.00100010000000000000
...........ATGCAGTGCCCGTCGAGGTGAT.............................................................................................................................................................................................................................................................................................2211.00101000000000000000
droSec2
G-AGAGCGCCAATGCAGTGCCCGTCGAGGTGATGGC-CGAGAAC-GGTGAGTGGA-CCGCAGGGCAAATG------GCTTA------TA-----GGACGACAGGATAATGACG-GAGAATGATGTGGCC---AG----ACAATGAAAAGAGGT-TTAG--CAAGGG--CTT-------TCAGCTCTC------------------------------------------------A-AGTAGGG--CGCATAATTAGC-GGTTTTGCAAACGGG--C--------------ATCCAACCACATCGATGGCCAATCATCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........ATGCAGTGCCCGTCGAGGTGAT.............................................................................................................................................................................................................................................................................................2218.0080710
.........CAATGCAGTGCCCGTCGAGGTGATGGC-.........................................................................................................................................................................................................................................................................................2716.0060510
..........AATGCAGTGCCCGTCGAGGTGAT.............................................................................................................................................................................................................................................................................................2315.0050401
.............GCAGTGCCCGTCGAGGTGATGGC-.........................................................................................................................................................................................................................................................................................2315.0050320
................GTGCCCGTCGAGGTGATGGC-.........................................................................................................................................................................................................................................................................................2014.0041120
.........CAATGCAGTGCCCGTCGAGGTGAT.............................................................................................................................................................................................................................................................................................2413.0030210
...........ATGCAGTGCCCGTCGAGGTGATGGC-C........................................................................................................................................................................................................................................................................................2612.0020200
............TGCAGTGCCCGTCGAGGTGAT.............................................................................................................................................................................................................................................................................................2112.0020110
..........AATGCAGTGCCCGTCGAGGT................................................................................................................................................................................................................................................................................................2011.0010010
...........ATGCAGTGCCCGTCGAGGTGATGG...........................................................................................................................................................................................................................................................................................2411.0010010
..............CAGTGCCCGTCGAGGTGATGGC-C........................................................................................................................................................................................................................................................................................2311.0010100
...........ATGCAGTGCCCGTCGAGGTGATGGC-CGAG.....................................................................................................................................................................................................................................................................................2911.0010100
.............GCAGTGCCCGTCGAGGTGAT.............................................................................................................................................................................................................................................................................................2011.0010100
............TGCAGTGCCCGTCGAGGT................................................................................................................................................................................................................................................................................................1811.0010010
...............AGTGCCCGTCGAGGTGATGGC-CGAG.....................................................................................................................................................................................................................................................................................2511.0010010
............TGCAGTGCCCGTCGAGGTGATGGC-.........................................................................................................................................................................................................................................................................................2411.0010100
...........ATGCAGTGCCCGTCGAGGTGATGGC-.........................................................................................................................................................................................................................................................................................2511.0010100
............TGCAGTGCCCGTCGAGGTGATGGC-CGA......................................................................................................................................................................................................................................................................................2711.0010010
.......GCCAATGCAGTGCCCGTCGAGGTGATGGC-.........................................................................................................................................................................................................................................................................................2911.0010100
...........ATGCAGTGCCCGTCGAGGTGATGGC-CG.......................................................................................................................................................................................................................................................................................2711.0010010
........CCAATGCAGTGCCCGTCGAGGTGATGGC-.........................................................................................................................................................................................................................................................................................2811.0010100
...............AGTGCCCGTCGAGGTGATGG...........................................................................................................................................................................................................................................................................................2011.0010100
.................TGCCCGTCGAGGTGATGG...........................................................................................................................................................................................................................................................................................1811.0010010
..........AATGCAGTGCCCGTCGAGGTGATGGC-.........................................................................................................................................................................................................................................................................................2611.0010010
....................CCGTCGAGGTGATGGC-CGAGA....................................................................................................................................................................................................................................................................................2111.0010010
...........ATGCAGTGCCCGTCGAGGT................................................................................................................................................................................................................................................................................................1911.0010010
...........ATGCAGTGCCCGTCGAGGTGA..............................................................................................................................................................................................................................................................................................2111.0010100
........CCAATGCAGTGCCCGTCGAGGTGAT.............................................................................................................................................................................................................................................................................................2511.0010100
.........CAATGCAGTGCCCGTCGAGGT................................................................................................................................................................................................................................................................................................2111.0010010
................GTGCCCGTCGAGGTGATGGC-C........................................................................................................................................................................................................................................................................................2111.0010100
droYak3
G-AGAGCGCCAATGCAGTGCCCGTCGAGGTGATGGC-CGAGAAC-GGTGAGTGGA-CCGCAGGACAAATG------GCTTA------TG-----GGGCGAAAGGATAATGACG-GAGAATGATGTGGCC---AG----ACAATGACAAAACCTCTTTT--CAAGGG--CTTTCTGCTTTCTGCTCTC------------------------------------------------A-AGTAAAG--CGCATAATTAGC-GGTTTTGCAAATGGG--C--------------TTCCAACCACATCGATGGCCAATCA--SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........AATGCAGTGCCCGTCGAGGTGAT.............................................................................................................................................................................................................................................................................................2322.50500000050000
..........AATGCAGTGCCCGTCGAGGT................................................................................................................................................................................................................................................................................................2022.00401100020000
.........................GAGGTGATGGC-CGAGAAC-GCGC.............................................................................................................................................................................................................................................................................2222.00400000040000
.........CAATGCAGTGCCCGTCGAGGTGAT.............................................................................................................................................................................................................................................................................................2421.50300000030000
.............GCAGTGCCCGTCGAGGTGAT.............................................................................................................................................................................................................................................................................................2021.50301000020000
...........ATGCAGTGCCCGTCGAGGTGAT.............................................................................................................................................................................................................................................................................................2221.50300000030000
.........CAATGCAGTGCCCGTCGAGGTGATGGC-.........................................................................................................................................................................................................................................................................................2721.50300000030000
.........CAATGCAGTGCCCGTCGAGGTGATGGC-C........................................................................................................................................................................................................................................................................................2821.50300000030000
..........AATGCAGTGCCCGTCGAGGTGATGGC-.........................................................................................................................................................................................................................................................................................2621.00200000020000
...........ATGCAGTGCCCGTCGAGGTG...............................................................................................................................................................................................................................................................................................2021.00210000010000
...............AGTGCCCGTCGAGGTGATGGC-C........................................................................................................................................................................................................................................................................................2220.50100100000000
.......GCCAATGCAGTGCCCGTCGAGGT................................................................................................................................................................................................................................................................................................2320.50101000000000
...........ATGCAGTGCCCGTCGAGGTGATG............................................................................................................................................................................................................................................................................................2320.50100000010000
.....................CGTCGAGGTGATGGC-CGAGAAC-GCGC.............................................................................................................................................................................................................................................................................2620.50101000000000
......CGCCAATGCAGTGCCCGTCGAG..................................................................................................................................................................................................................................................................................................2220.50101000000000
........CCAATGCAGTGCCCGTCGAGGTGAT.............................................................................................................................................................................................................................................................................................2520.50100000010000
........................................................................................................ATAATGACG-GAGAATGATGTGGCC---..........................................................................................................................................................................................2420.50100000010000
....................CCGTCGAGGTGATGGC-CGAGAAC-GC...............................................................................................................................................................................................................................................................................2520.50101000000000
..........................................................................................................................................................................................C------------------------------------------------A-AGTAAAG--CGCATAATTACA-...........................................................2120.50100000100000
........................................................................................................ATAATGACG-GAGAATGATGT.................................................................................................................................................................................................2020.50100000010000
.............................................................................................................................GGCC---AG----ACAATGACAAAAC.......................................................................................................................................................................1920.50101000000000
......CGCCAATGCAGTGCCCGTC.....................................................................................................................................................................................................................................................................................................1920.50101000000000
.....GCGCCAATGCAGTGCCCGTCGAGGTG...............................................................................................................................................................................................................................................................................................2620.50101000000000
...............................ATGGC-CGAGAAC-GGTGAGTGGA-CCGCA.................................................................................................................................................................................................................................................................2720.50100000010000
.......GCCAATGCAGTGCCCGTCGAGGTGAT.............................................................................................................................................................................................................................................................................................2620.50100100000000
................GTGCCCGTCGAGGTGATGGC-.........................................................................................................................................................................................................................................................................................2020.50100010000000
......................................................................................................GGATAATGACG-GAGAATGATGTGGC..............................................................................................................................................................................................2520.50100000010000
..........AATGCAGTGCCCGTCGAGGTGATG............................................................................................................................................................................................................................................................................................2420.50100010000000
...........ATGCAGTGCCCGTCGAGGT................................................................................................................................................................................................................................................................................................1920.50101000000000
............TGCAGTGCCCGTCGAGGTGATGGC-.........................................................................................................................................................................................................................................................................................2420.50100000010000
...........ATGCAGTGCCCGTCGAGGTGATGGC-.........................................................................................................................................................................................................................................................................................2520.50100000010000
..............................................................................TTA------TG-----GGGCGAAAGGATAATGACG-GA..........................................................................................................................................................................................................2620.50100000010000
............TGCAGTGCCCGTCGAGGTGATG............................................................................................................................................................................................................................................................................................2220.50110000000000
.......GCCAATGCAGTGCCCGTCGA...................................................................................................................................................................................................................................................................................................2020.50100000010000
........................CGAGGTGATGGC-CGAGAAC-GCGC.............................................................................................................................................................................................................................................................................2320.50101000000000
....................................................................................................................GAATGATGTGGCC---AG----ACAATGACAAAAC.......................................................................................................................................................................2820.50101000000000
....AGCGCCAATGCAGTGCCCGTCGAGGT................................................................................................................................................................................................................................................................................................2620.50100000100000
....................CCGTCGAGGTGATGGC-CGAG.....................................................................................................................................................................................................................................................................................2020.50100000010000
.........CAATGCAGTGCCCGTCGAGGTG...............................................................................................................................................................................................................................................................................................2220.50100000010000
...........................GGTGATGGC-CGAGAAC-GCGC.............................................................................................................................................................................................................................................................................20160.13200000020000
droEre2
G-AGAGCGCCAATGCAGTGCCCGTCGAGGTGATGGC-CGAGAAC-GGTAAGTGGA-CCGCAGGGCGAATG------GCTTGCGAGTGTA-----GGACGAAAGGATAATAGCG-GAGAATGATGTGGATGCCAG----ACAATGAAAAGAGGT-TTAG--CAAGGC--CTT-------TAAGCTCTC------------------------------------------------C-AGTTGGG--CGCATAATTAGC-GGTTTTGCGAACGGG--C--------------T--CCACCACGCCGATGGCCAATCATCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........ATGCAGTGCCCGTCGAGGTGAT.............................................................................................................................................................................................................................................................................................2218.0081010240
..........AATGCAGTGCCCGTCGAGGTGAT.............................................................................................................................................................................................................................................................................................2316.0062000310
.........CAATGCAGTGCCCGTCGAGGTGAT.............................................................................................................................................................................................................................................................................................2413.0031000200
..........AATGCAGTGCCCGTCGAGGTGATGGC-.........................................................................................................................................................................................................................................................................................2613.0030000210
.............GCAGTGCCCGTCGAGGTGATGGC-C........................................................................................................................................................................................................................................................................................2413.0030000300
.............GCAGTGCCCGTCGAGGTGAT.............................................................................................................................................................................................................................................................................................2013.0030000210
...........ATGCAGTGCCCGTCGAGGT................................................................................................................................................................................................................................................................................................1913.0031001100
................GTGCCCGTCGAGGTGATGGC-.........................................................................................................................................................................................................................................................................................2013.0030000210
...............AGTGCCCGTCGAGGTGATGGC-.........................................................................................................................................................................................................................................................................................2112.0020000200
...........ATGCAGTGCCCGTCGAGGTGATGGC-.........................................................................................................................................................................................................................................................................................2512.0020001100
..........AATGCAGTGCCCGTCGAGGTGATG............................................................................................................................................................................................................................................................................................2412.0020000110
.............GCAGTGCCCGTCGAGGTGATGGC-.........................................................................................................................................................................................................................................................................................2312.0020000110
......................GTCGAGGTGATGGC-CGAGAAC-GCGC.............................................................................................................................................................................................................................................................................2511.0010000010
...............AGTGCCCGTCGAGGTGATGGC-CGAGAAC-.................................................................................................................................................................................................................................................................................2811.0010010000
....AGCGCCAATGCAGTGCCCGTCGAGGT................................................................................................................................................................................................................................................................................................2611.0010000010
............TGCAGTGCCCGTCGAGGTGAT.............................................................................................................................................................................................................................................................................................2111.0010010000
........CCAATGCAGTGCCCGTCGAGGTGAT.............................................................................................................................................................................................................................................................................................2511.0010000100
.........CAATGCAGTGCCCGTCGAGGTGATGGC-.........................................................................................................................................................................................................................................................................................2711.0010000010
.............GCAGTGCCCGTCGAGGTGATGGC-CGA......................................................................................................................................................................................................................................................................................2611.0010000010
.........................GAGGTGATGGC-CGAGAAC-G................................................................................................................................................................................................................................................................................1911.0010000010
........CCAATGCAGTGCCCGTCGAGGTGATGGC-.........................................................................................................................................................................................................................................................................................2811.0010000100
................GTGCCCGTCGAGGTGATGGC-C........................................................................................................................................................................................................................................................................................2111.0010001000
.......GCCAATGCAGTGCCCGTCGAGGT................................................................................................................................................................................................................................................................................................2311.0010000010
..........AATGCAGTGCCCGTCGAGGTGATGGC-C........................................................................................................................................................................................................................................................................................2711.0010000010
.........................GAGGTGATGGC-CGAGAAC-GCG..............................................................................................................................................................................................................................................................................2111.0010000100
...........ATGCAGTGCCCGTCGAGGTGATGGC-CGA......................................................................................................................................................................................................................................................................................2811.0010000100
..........AATGCAGTGCCCGTCGAGGTG...............................................................................................................................................................................................................................................................................................2111.0010000010
..........AATGCAGTGCCCGTCGAGGT................................................................................................................................................................................................................................................................................................2011.0010000100
...............AGTGCCCGTCGAGGTGATGGC-CGAGAAC-G................................................................................................................................................................................................................................................................................2911.0010000100
.................................................................GAATG------GCTTGCGAGTGTA-----GGAC............................................................................................................................................................................................................................2211.0010000100
.................TGCCCGTCGAGGTGATGGC-CGAGAAC-.................................................................................................................................................................................................................................................................................2611.0011000000
.....................CGTCGAGGTGATGGC-CGAGAAC-GC...............................................................................................................................................................................................................................................................................2411.0011000000
.......GCCAATGCAGTGCCCGTCGAG..................................................................................................................................................................................................................................................................................................2111.0010000100
............TGCAGTGCCCGTCGAGGTGATGG...........................................................................................................................................................................................................................................................................................2311.0011000000
...............AGTGCCCGTCGAGGTGATGGC-C........................................................................................................................................................................................................................................................................................2211.0011000000
.............GCAGTGCCCGTCGAGGTGATGGT-.........................................................................................................................................................................................................................................................................................2311.0010000010
G-AGAGCGCCAATGCAGTGCCA........................................................................................................................................................................................................................................................................................................2111.0010000100
.................................GGC-CGAGAAC-GGTAAGTGG........................................................................................................................................................................................................................................................................1911.0010000010
...........ATGCAGTGCCCGTCGAGGTGATGGC-C........................................................................................................................................................................................................................................................................................2611.0010000100

Generated: 06/08/2015 at 04:32 PM