ID:

dpe_1693

 Coordinate:

scaffold_444:10478-10721 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-27.2 -27.2 -27.2

Flybase annnotation

CDS [Dper\GL25342-cds]; CDS [Dper\GL25342-cds]; exon [dper_GLEANR_7714:1]; exon [dper_GLEANR_7714:2]; intron [Dper\GL25342-in]

No Repeatable elements found

mature
star
  1. dpe_1693  scaffold_444:10536-10560 -
  2. scaffold_11:797153-797177 +

Sense Strand Reads

##################################################----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CTCGCGGCGGCAGAGGGCTGGCGCCGTCGTTCGGCGTCTACGCTGCGTCGGTGACTTTTGTCTCTCTTTCTCGCTGCTGGCGCGTCGTTACTTCGCTTTAGTTTTCCGAGTTTTTCTTCTGCCGTTGCTGTTGTGGGCTTTTGCTGTTGAACCACAGCCAAAATAATTAAAAAGTCTTCATTACCCTTCATTTTAAGAAAGGGCGCGATCCCGTTAACGCATGATGAACTTTTAGCGTGCCTCCTCTTCGGGGGTCATCCACTTCCCCATTTTGGCCATAAAGTGTGTCTCCAGCTTGCCGTTTCCAAGGAGGAGCTGCGGCTGAAGATGATACAGCGGGAGAG
***************************************************************************************....................((((((.((...(((.(((((.((((((((((((((((((......)))))...........))))))).......((((((.......)).))))))))))...)).)))))).)).)))))).....************************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V111
male body		 M021
embryo
 V050
head
 V057
head
 V042
embryo
.................................................................................................................................GTAGTGGGCTTTTTCTGTT.................................................................................................................................................................................................... 19 2 3 9.67 29 21 8 0 0 0 0
.......................................................................................TTACTTCGCTTTAGTTTTCCGAGT......................................................................................................................................................................................................................................... 24 0 1 3.00 3 3 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................GCTGAAGATAATACATCGG..... 19 2 2 2.00 4 0 0 4 0 0 0
.............................................................................................................................................................................................................................................................................................................TTTCCAAGGAGGAGCTGCGG....................... 20 0 2 2.00 4 4 0 0 0 0 0
...................................................................................................................................................................................................................CGTTAACGCATGATGAACTTTTAGC............................................................................................................ 25 0 2 2.00 4 4 0 0 0 0 0
.................................................................................................................................GTAGTGGGCTTTTTCTGTTC................................................................................................................................................................................................... 20 3 13 1.69 22 11 9 0 2 0 0
...................................................................................................................................................................................................................CGTTAACGCATGATGAACTTTTAGCG........................................................................................................... 26 0 2 1.50 3 3 0 0 0 0 0
................................................................................................................................GGTAGTGGGCTTTTTCTGTT.................................................................................................................................................................................................... 20 3 20 1.30 26 23 3 0 0 0 0
...................................................TGACTTTTGTCTCTCTTTCTCGC.............................................................................................................................................................................................................................................................................. 23 0 4 1.25 5 5 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................TTTCCAAGGAGGAGCTGCGGCTG.................... 23 0 2 1.00 2 2 0 0 0 0 0
.............................................................................................................................TGCTGTTGTGGGCTTTTGCTGC..................................................................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................................TTTTCTTCTGCCGTTGCTGT..................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................TTCCAAGGAGGAGCTGCGG....................... 19 0 2 1.00 2 2 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................TTTCCAAGGAGGAGCTGCGGC...................... 21 0 2 1.00 2 2 0 0 0 0 0
...............................................................................................................................CTGTTGTGGGCTTTTGCTGTTG................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................TTTCCAAGGAGGAGCTGCGGCTGA................... 24 0 2 1.00 2 2 0 0 0 0 0
...................................................................................................................................................................................................................................................................................CCATAAAGTGTGTCTCCAGCTTG.............................................. 23 0 2 1.00 2 2 0 0 0 0 0
...................................................................................................................................................................................................................CGTTAACGCATGATGAACTTTTAG............................................................................................................. 24 0 2 1.00 2 2 0 0 0 0 0
..................................................................................................................................TAGTGGGCTTTTTCTGTT.................................................................................................................................................................................................... 18 2 9 0.56 5 5 0 0 0 0 0
...............................................................................................................................................................................................................................................................................TTGGCCATAAAGTGTGTCTCCAGCT................................................ 25 0 2 0.50 1 1 0 0 0 0 0
............................................................................................................................................................................................................................ATGAAGAGCTTTTAGTGTGCC....................................................................................................... 21 3 4 0.50 2 1 1 0 0 0 0
...................................................TGACTTTTGTCTCTCTTTCTCGCTG............................................................................................................................................................................................................................................................................ 25 0 4 0.50 2 2 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................TTTCCAAGGAGGAGCTGCGGCTGAA.................. 25 0 2 0.50 1 1 0 0 0 0 0
...................................................TGACTTTTGTCTCTCTTTCTCGCT............................................................................................................................................................................................................................................................................. 24 0 4 0.50 2 2 0 0 0 0 0
...................................................................................................................................................................................................................................................................................CCATAAAGTGTGTCTCCAGC................................................. 20 0 2 0.50 1 1 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................TTTCCAAGGACGAGCTGCGGCTG.................... 23 1 2 0.50 1 1 0 0 0 0 0
....................................................................................................................................................................................................................GTTAACGCATGATGAACTTTTAGC............................................................................................................ 24 0 2 0.50 1 1 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................TGAAGATGATACAGCGGGAG.. 20 0 2 0.50 1 0 1 0 0 0 0
.......................................................................................................................................................................................................................................................................................................TTGCCGTTTCCAAGGAGGAGCTGCGG....................... 26 0 2 0.50 1 0 1 0 0 0 0
......................................................................................................................................................................................................................TAACGCATGATGAACTTTTAGCGT.......................................................................................................... 24 0 2 0.50 1 1 0 0 0 0 0
...............................................................................................................................................................................................................................................................................TTGGCCATAAAGTGTGTCTCC.................................................... 21 0 2 0.50 1 1 0 0 0 0 0
.................................................................................................................................GTAGTGGGCTTTTTCTGT..................................................................................................................................................................................................... 18 2 12 0.50 6 5 1 0 0 0 0
...................................................TGACTTTTGTCTCTCTTTCTCGCTGC........................................................................................................................................................................................................................................................................... 26 0 4 0.50 2 2 0 0 0 0 0
.................................................................................................................................GTAGTGGGCTTTTTCTGTTCA.................................................................................................................................................................................................. 21 3 5 0.40 2 0 0 2 0 0 0
.......................................................................................TTACTTCGGTTTAGTTTTCCGAAT......................................................................................................................................................................................................................................... 24 2 3 0.33 1 1 0 0 0 0 0
..........................TCGTTCGGCGTCTATGCTGCTT........................................................................................................................................................................................................................................................................................................ 22 2 3 0.33 1 1 0 0 0 0 0
................................................................................CGCGTCGTTACTTCGCTTTAGTTT................................................................................................................................................................................................................................................ 24 0 11 0.27 3 3 0 0 0 0 0
.......................................................TTTTGTCTCTCTTTCTCGCTGC........................................................................................................................................................................................................................................................................... 22 0 4 0.25 1 1 0 0 0 0 0
.......................................................TTTTGTCTCTCTTTCTCGCTGCTGG........................................................................................................................................................................................................................................................................ 25 0 4 0.25 1 1 0 0 0 0 0
.......................................................TTTTGTCTCTCTTTCTCGCTGCT.......................................................................................................................................................................................................................................................................... 23 0 4 0.25 1 1 0 0 0 0 0
...................................................TGACTTTTATCTCTCTTTCTCGCTG............................................................................................................................................................................................................................................................................ 25 1 4 0.25 1 1 0 0 0 0 0
............................................................TCTCTCTTTCTCGCTGCTGGCGC..................................................................................................................................................................................................................................................................... 23 0 4 0.25 1 1 0 0 0 0 0
.........................................................TTGTCTCTCTTTCTCGCTGCTGG........................................................................................................................................................................................................................................................................ 23 0 4 0.25 1 1 0 0 0 0 0
.......................................................TTTTGTCTCTCTTTCTCGCTGCTG......................................................................................................................................................................................................................................................................... 24 0 4 0.25 1 1 0 0 0 0 0
..............................................................................GGCGCGTCGTTACTTCGCTTTAGTTT................................................................................................................................................................................................................................................ 26 0 10 0.20 2 2 0 0 0 0 0
.TCGCGGCGGCAGAGGGCTGGCTA................................................................................................................................................................................................................................................................................................................................ 23 2 12 0.17 2 0 0 2 0 0 0
......................................................................................................................................................................................................................................................................................................................AGGAGCTGCGGTTGAAGTTG.............. 20 2 7 0.14 1 1 0 0 0 0 0
............................................................................................................................................................................................................................ATGAAGAGCTTTTAGCGGGC........................................................................................................ 20 3 8 0.13 1 0 0 0 0 1 0
..............................................................................GGCGCGTCGTTACTTCGCTTTAGTT................................................................................................................................................................................................................................................. 25 0 10 0.10 1 1 0 0 0 0 0
...............................................................................GCGCGTCGTTACTTCGCTTTAGTTT................................................................................................................................................................................................................................................ 25 0 10 0.10 1 1 0 0 0 0 0
.............................................................................TGGCGCGTCGTTACTTCGCTTTAGT.................................................................................................................................................................................................................................................. 25 0 10 0.10 1 1 0 0 0 0 0
..............................................................................GGCGCGTCGTTACTTCGCTTTAG................................................................................................................................................................................................................................................... 23 0 10 0.10 1 1 0 0 0 0 0
.TCGCGGCGGCAGAGGGCTGGCGCC............................................................................................................................................................................................................................................................................................................................... 24 0 10 0.10 1 1 0 0 0 0 0
.................................................................................GCGTCGTTACTTCGCTTTAGTCT................................................................................................................................................................................................................................................ 23 1 11 0.09 1 1 0 0 0 0 0
.................................................................................GCGTCGTTACTTCGCTTTAGTTT................................................................................................................................................................................................................................................ 23 0 11 0.09 1 1 0 0 0 0 0
......................................................................................GTTACTTCGCTTTAGTTTTCC............................................................................................................................................................................................................................................. 21 0 12 0.08 1 1 0 0 0 0 0
........................................................................................TACTTCGCTTTAGTTTTCCG............................................................................................................................................................................................................................................ 20 0 13 0.08 1 1 0 0 0 0 0
......................................................................TCGCTGCTGGCGCGTCGTTACTTC.......................................................................................................................................................................................................................................................... 24 0 14 0.07 1 1 0 0 0 0 0
..........................................................................TGCTGGCGCGTCGTTACTTCGCTT...................................................................................................................................................................................................................................................... 24 0 14 0.07 1 1 0 0 0 0 0
.......................................................................................TTACTTCGCTTTAGTTTTCCC............................................................................................................................................................................................................................................ 21 1 14 0.07 1 1 0 0 0 0 0
....................................................................TCTCGCTGCTGGCGCGTCG................................................................................................................................................................................................................................................................. 19 0 15 0.07 1 1 0 0 0 0 0
...................................................TGACTTTCGTCTCTCTTTCTCGCTG............................................................................................................................................................................................................................................................................ 25 1 15 0.07 1 1 0 0 0 0 0
.....................................................................CTCGCTGCTGGCGCGTCG................................................................................................................................................................................................................................................................. 18 0 15 0.07 1 1 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................GAGGAGCTGAGGTTGAAGGTG.............. 21 3 17 0.06 1 0 0 0 1 0 0
.TCGCGGCGGCAGAGGGCTG.................................................................................................................................................................................................................................................................................................................................... 19 0 17 0.06 1 0 0 1 0 0 0
..CGCGGCGGCAGAGGGCTG.................................................................................................................................................................................................................................................................................................................................... 18 0 17 0.06 1 0 0 1 0 0 0
.............AGGGCTGGCGCCGTCGTTCGGCGTC.................................................................................................................................................................................................................................................................................................................. 25 0 18 0.06 1 1 0 0 0 0 0
..........................TCGTTCGGCGTCTACGCTGCG......................................................................................................................................................................................................................................................................................................... 21 0 19 0.05 1 1 0 0 0 0 0
.......................CCGTCGTTCGGCGTCTACGCTGC.......................................................................................................................................................................................................................................................................................................... 23 0 19 0.05 1 1 0 0 0 0 0
...........................CGTTCGGCGTCTACGCTGCG......................................................................................................................................................................................................................................................................................................... 20 0 19 0.05 1 1 0 0 0 0 0
........................CGTCGTTCGGCGTCTACGCTGC.......................................................................................................................................................................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0
.TCGCGGCGGCAGAGGTTT..................................................................................................................................................................................................................................................................................................................................... 18 2 20 0.05 1 1 0 0 0 0 0
.............AGGGCTGGCGCCGTCGTTCGGCG.................................................................................................................................................................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0
.............AGGGCTGGCGCCGTCGTTCGGTTT................................................................................................................................................................................................................................................................................................................... 24 2 20 0.05 1 1 0 0 0 0 0
......................................................................................................................CTGCCGTGGCTGTTTTGG................................................................................................................................................................................................................ 18 2 20 0.05 1 0 0 0 0 1 0
.............AGGGCTGGCGCCGTCGTTCGG...................................................................................................................................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0
.........................GTCGTTCGGCGTCTACGCTG........................................................................................................................................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0
................GCTGGCGCCGTCGTTCGGC..................................................................................................................................................................................................................................................................................................................... 19 0 20 0.05 1 0 0 1 0 0 0
..........AGGAGGGCTCGCGCCGTCGT.......................................................................................................................................................................................................................................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 1
.........GCAGAGGGCTGGCGCCGTC............................................................................................................................................................................................................................................................................................................................ 19 0 20 0.05 1 0 0 1 0 0 0

Anti-sense strand reads

GAGCGCCGCCGTCTCCCGACCGCGGCAGCAAGCCGCAGATGCGACGCAGCCACTGAAAACAGAGAGAAAGAGCGACGACCGCGCAGCAATGAAGCGAAATCAAAAGGCTCAAAAAGAAGACGGCAACGACAACACCCGAAAACGACAACTTGGTGTCGGTTTTATTAATTTTTCAGAAGTAATGGGAAGTAAAATTCTTTCCCGCGCTAGGGCAATTGCGTACTACTTGAAAATCGCACGGAGGAGAAGCCCCCAGTAGGTGAAGGGGTAAAACCGGTATTTCACACAGAGGTCGAACGGCAAAGGTTCCTCCTCGACGCCGACTTCTACTATGTCGCCCTCTC
************************************************************************************************************....................((((((.((...(((.(((((.((((((((((((((((((......)))))...........))))))).......((((((.......)).))))))))))...)).)))))).)).)))))).....*************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V111
male body		 M021
embryo
 V057
head
 V042
embryo
...............................................................................................................................................................................................................................................................................................AGAGGTCGAACGGCAAAGGTTCCT................................. 24 0 2 22.50 45 44 1 0 0 0
....................................................................................................................................................................................................CTTTCCCGCGCTAGGGCAATTGCGT........................................................................................................................... 25 0 1 19.00 19 19 0 0 0 0
......................................................................................................................................................................................................TTCCCGCGCTAGGGCAATTGCGT........................................................................................................................... 23 0 1 19.00 19 19 0 0 0 0
...................................................................................................................................................................................................TCTTTCCCGCGCTAGGGCAATTGCGT........................................................................................................................... 26 0 1 12.00 12 11 1 0 0 0
.....................................................................................................................................................................................................TTTCCCGCGCTAGGGCAATTGCGT........................................................................................................................... 24 0 1 6.00 6 6 0 0 0 0
.............................................................................................................................................................................................................................................................................................ACAGAGGTCGAACGGCAAAGGTTCCT................................. 26 0 2 5.00 10 10 0 0 0 0
..............................................................................................................................................................................................................................................................................................CAGAGGTCGAACGGCAAAGGTTCCT................................. 25 0 2 4.50 9 9 0 0 0 0
.......................................................................................................................................................................................................TCCCGCGCTAGGGCAATTGCGTACT........................................................................................................................ 25 0 1 3.00 3 3 0 0 0 0
................................................................................................................................................................................................................................................................................................GAGGTCGAACGGCAAAGGTTCCT................................. 23 0 2 2.50 5 5 0 0 0 0
...............................................................................................................................................................................................................................................................................................AGAGGTCGAACGGCAAAGGTTCC.................................. 23 0 2 2.00 4 4 0 0 0 0
.........................................CGACGCAGCCACTGAAAACAGAGA....................................................................................................................................................................................................................................................................................... 24 0 1 2.00 2 2 0 0 0 0
..................................................................................................................................................................................................................................................................................................GGTCGAACGGCAAAGGTTCCT................................. 21 0 2 2.00 4 4 0 0 0 0
...................................................................................................................................................................................................TCTTTCCCGCGCTAGGGCAATTGCG............................................................................................................................ 25 0 1 2.00 2 2 0 0 0 0
.......................................................................................................................................................................................................TCCCGCGCTAGGGCAATTGCGT........................................................................................................................... 22 0 1 2.00 2 2 0 0 0 0
.............................................................................................................................................................................................................................................................................................ACAGAGGTCGAACGGCAAAGGTTCC.................................. 25 0 2 1.50 3 3 0 0 0 0
.........................................................................................................................................................................................................................................................................................TCACACAGAGGTCGAACGGCAAAGGTT.................................... 27 0 2 1.50 3 3 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................GACGCCGACTTCTACTATGTCGCCCT... 26 0 2 1.50 3 3 0 0 0 0
.................................................................................................................................................................................................................................................................................................AGGTCGAACGGCAAAGGTTCCT................................. 22 0 2 1.50 3 3 0 0 0 0
.....................................GATGCGACGCAGCCACTGAAAACA........................................................................................................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0
..............................................................................................................................................................................................................................................................................................CAGAGGTCGAACGGCAGAGGTTCCT................................. 25 1 2 1.00 2 2 0 0 0 0
......................................................................................................................................................................................................TTCCCGCGCTAGGGGAATTGCGT........................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0
.............................................................................................................................................ACGACAACTTGGTGTCGGTTTTAT................................................................................................................................................................................... 24 0 2 1.00 2 2 0 0 0 0
....................................................................................................................................................................................................TTTTCCCGCGCTAGGGCAATTGCGT........................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................................................................................................ACAGAGGTCGAACGGCAAAGGTT.................................... 23 0 2 1.00 2 2 0 0 0 0
......................................................................................................................................................................................................TTCCCGCGCTAGGGAAATTGCGT........................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0
................................................................................................................................................................................................................................................GAGGAGAAGCCCCCAGTAGGTGAAG............................................................................... 25 0 1 1.00 1 0 1 0 0 0
.........................................CGACGCAGCCACTGAAAACAGAG........................................................................................................................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................................TTTCCCGCGCTAGGGCAATTGCGG........................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0
...........................................................................................................................................................................................................................................................................................ACACAGAGGTCGAACGGCAAAGGTTCCT................................. 28 0 2 1.00 2 2 0 0 0 0
......................................................................................................................................................................................................TTCCCGCGCTAGGGCAATTGCGTACT........................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................................TCTTTCCCGCGCTAGGGAAATTGCGT........................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................................TCTTTCCCGCGCTAGGGCAATTGCT............................................................................................................................ 25 1 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................................TCTATCCCGCGCTAGGGCAATTGCG............................................................................................................................ 25 1 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................................................TCCCGCGCTAGGGCAAGTGCGTACT........................................................................................................................ 25 1 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................................................TCCCGCGCTAGGGCAATTGCGTAC......................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
.............................................................................................................CAAAAAGAAGACGGCAACGACAACAC................................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0
......................................ATGCGACGCAGCCACTGAAAACAGAGA....................................................................................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................................TTTCCCGCGCTAGGGGAATTGCGT........................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0
...........................................................................................................................................................................................................GCGCTAGGGCAATTGCGT........................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................................................................................................................................TTCACACAGAGGTCGAACGGCAAAGGT..................................... 27 0 2 1.00 2 2 0 0 0 0
......................................................................................................................................................................................................TTCCCGCGCTAGGGCAATTGCG............................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................................................................................................AGGTGAAGGGGTAAAACCGGT.................................................................. 21 0 2 1.00 2 0 2 0 0 0
..................................................................................................................................................................................................TTCTTTCCCGCGCTAGGGCAATTGCGT........................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
....................................................................................................................................................................................................................................................................TGAAGGGGTAAAACCGGTAT................................................................ 20 0 2 0.50 1 1 0 0 0 0
............................................................................................................................................................................................................................................................CCAGTAGGTGAAGGGGTAAAACCGGT.................................................................. 26 0 2 0.50 1 0 1 0 0 0
..............................................................................................................................................................................................................................................................TTTAGGTGAAGGGGTAAAACCGGTAT................................................................ 26 2 2 0.50 1 1 0 0 0 0
............................................................................................................................................................................................................................................................................................................................ACGCCGACTTCTACTATGTCGCCCT... 25 0 2 0.50 1 1 0 0 0 0
.................................................................................................................................................................................................................................................................AGGTGAAGGGGTAAAACCGGTAT................................................................ 23 0 2 0.50 1 1 0 0 0 0
................................................................................................................................................................................................................................................................................................GAGGTCGAACGGCAAAGGTTCC.................................. 22 0 2 0.50 1 1 0 0 0 0
.............................................................................................................................................................................................................................................................................................ACAGAGGTCGAAGGGCAAAGGTTCCT................................. 26 1 2 0.50 1 1 0 0 0 0
............................................................................................................................................................................................................................................................................................CACAGAGGTCGAACGGCATAGGTTCCT................................. 27 1 2 0.50 1 1 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................GACGCCGACTTCTACTATGTCGCCC.... 25 0 2 0.50 1 1 0 0 0 0
.............................................................................................................................................................................................................................................................AAGTAGGTGAAGGGGTAAAACCGGT.................................................................. 25 1 2 0.50 1 1 0 0 0 0
...........................................................................................................................................................................................................................................................ACCAGTAGGTGAAGGGGTAAAACCGGT.................................................................. 27 1 2 0.50 1 1 0 0 0 0
.......................................................................................................................................................................................................................................................................AGGGGTAAAACCGGTATTTCACAC......................................................... 24 0 2 0.50 1 1 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................CCTCGACGCCGACTTCTACTAT........... 22 0 2 0.50 1 1 0 0 0 0
.............................................................................................................................................................................................................................................................................................ACAGAGGTCGAACGGCAAAGGTTCCTT................................ 27 1 2 0.50 1 1 0 0 0 0
.................................................................................................................................................................................................................................................................................................AGGTCGAACGGCAAAGGTTCCTC................................ 23 0 2 0.50 1 1 0 0 0 0
.........................................................................................................................................................................TTTTCAGAAGTAATGGGAAGTAAAAT..................................................................................................................................................... 26 0 2 0.50 1 0 1 0 0 0
...............................................................................................................................................................................................................................................GGAGGAGAAGCCCCCAGTAGGT................................................................................... 22 0 2 0.50 1 0 1 0 0 0
.....................................................................................................................................................................................................................................................................................................CGAACGGCAAAGGTTCCTCCTCGACG......................... 26 0 2 0.50 1 1 0 0 0 0
...............................................................................................................................................................................................................................................................TTAGGTGAAGGGGTAAAACCGGTAT................................................................ 25 1 2 0.50 1 1 0 0 0 0
.........................................................................................................................................................................................................................................................................GGGTAAAACCGGGATTTCACA.......................................................... 21 1 2 0.50 1 1 0 0 0 0
..........................................................................................................................................................................................................................................................................................CACACAGAGGTCGAACGGCAAAGGTT.................................... 26 0 2 0.50 1 1 0 0 0 0
........................................................................................................................................................................................................................................................................................................................CTCGACGCCGACTTCTACTATGT......... 23 0 2 0.50 1 1 0 0 0 0
................................................................................................................................................................................................................................................................................................GATGTCGAACGGCAAGGGTTCCTC................................ 24 2 2 0.50 1 1 0 0 0 0
...............................................................................................................................................................................................................................................................GTAGGTGAAGGGGTAAAACCGGTAT................................................................ 25 0 2 0.50 1 1 0 0 0 0
................................................................................................................................................................................................................................................................................................GAGGTCGAACGGCAGAGGTTCCT................................. 23 1 2 0.50 1 1 0 0 0 0
.........................................................................................................................................................................TTTTCAGAAGTAATGGGAAGTAA........................................................................................................................................................ 23 0 2 0.50 1 0 1 0 0 0
........................................................................................................................................................................................................................................................................................TTCACACAGAGGTCGAACGGCAAAGGTT.................................... 28 0 2 0.50 1 1 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................GCCGACTTCTACTATGTCGCCCT... 23 0 2 0.50 1 1 0 0 0 0
................................................................................................................................................................TTTATTAATTTTTCAGAAGTAAT................................................................................................................................................................. 23 0 2 0.50 1 1 0 0 0 0
............................................................................................................................................................................................................................................................................................CACAGAGGTCGAACGGCAAAGGTTCCT................................. 27 0 2 0.50 1 1 0 0 0 0
..............................................................................................................................................................................................................................................................................................CAGAGGTCGAACGGCAAAGGTTCC.................................. 24 0 2 0.50 1 1 0 0 0 0
..........................................................................................................................................................................TTTCAGAAGTAATGGGAAGTAAAAT..................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0
...............................................................................................................................................................................................................................................................................................AGAGGTCGAACGGCAGAGGTTCCT................................. 24 1 2 0.50 1 1 0 0 0 0
.........................................................................................................................................................................................................................................................................GGGTAAAACCGGTATTTCACACAGAG..................................................... 26 0 2 0.50 1 1 0 0 0 0
...............................................................................................................................................................................................................................................................GTAGGTGAAGGGGTAAAACCGGT.................................................................. 23 0 2 0.50 1 1 0 0 0 0
..............................................................................................................................................................................................................................................................AGTAGGTGAAGGGGTAAAACCGGT.................................................................. 24 0 2 0.50 1 1 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................CGACGCCGACTTCTACTATGTCGCCCT... 27 0 2 0.50 1 1 0 0 0 0
........................................................................................................................................................................................................................................................................GGGGTAAAACCGGTATTTCACA.......................................................... 22 0 2 0.50 1 1 0 0 0 0
...............................................................................................................................................................................................................................................................................................AGAGGTCGAACTGCAAAGGTTCCT................................. 24 1 2 0.50 1 0 1 0 0 0
........................................................................................................................................................................................................................................................................GGGGTAAAACCGGTATTTCAC........................................................... 21 0 3 0.33 1 1 0 0 0 0
.....................................................................................................................................................................................................................................................................GAAGGGGTAAAACCGGTATTTCAC........................................................... 24 0 3 0.33 1 1 0 0 0 0
...............................................................................................................................................................................................................................................................................................AGAGGTCGAACGGCAAAGG...................................... 19 0 3 0.33 1 1 0 0 0 0
........................................................................CGACGACCGTGCATCAATC............................................................................................................................................................................................................................................................. 19 3 20 0.30 6 4 0 0 1 1
................................................................................................................................................ACAACTTGGTGTCGGTTTTATT.................................................................................................................................................................................. 22 0 4 0.25 1 1 0 0 0 0
.........................................................................GACGACCGCGCAGCAATGAAGCGA....................................................................................................................................................................................................................................................... 24 0 14 0.21 3 3 0 0 0 0
.................................................................................................................................................CAACTTGGTGTCGGTTTTA.................................................................................................................................................................................... 19 0 5 0.20 1 0 0 1 0 0
..................................................................................................................................................................................................................................TTGAGAATCGCACGGACG.................................................................................................... 18 2 5 0.20 1 0 0 0 1 0
.....CCGCCGTCTCCCGACCGCGGCAGCAAGC....................................................................................................................................................................................................................................................................................................................... 28 0 10 0.20 2 0 0 2 0 0
.....................................................................................................................................................................................................................................................................................................................CTCCTCGACTCCGACTTCAAC.............. 21 2 6 0.17 1 1 0 0 0 0
..........................................................................ACGACCGCGCAGCAATGAAGCGA....................................................................................................................................................................................................................................................... 23 0 14 0.14 2 2 0 0 0 0
...........................................................................CGACCGCGCAGCAATGAAGCGA....................................................................................................................................................................................................................................................... 22 0 14 0.14 2 2 0 0 0 0
............................................................................GACCGCGCAGCAATGAAGCGA....................................................................................................................................................................................................................................................... 21 0 14 0.14 2 2 0 0 0 0
.....................................................................................GCAATGAAGCGAAATCAAAAGGC............................................................................................................................................................................................................................................ 23 0 11 0.09 1 1 0 0 0 0
.................................................................................................................................CATCACCCGAAAAAGACAAG................................................................................................................................................................................................... 20 3 13 0.08 1 1 0 0 0 0
........................................................................CGACGACCGCGCAGCAGTGAAGCGA....................................................................................................................................................................................................................................................... 25 1 14 0.07 1 1 0 0 0 0
...........................................................................CGACCGCGCAGCAGTGAAGCGA....................................................................................................................................................................................................................................................... 22 1 14 0.07 1 1 0 0 0 0
......................................................................................................................................................................................................................................................................................................................TCCTCGACTCCGACTTCAAC.............. 20 2 14 0.07 1 1 0 0 0 0
.........................................................................GACGACCGCGCAGCAATGAA........................................................................................................................................................................................................................................................... 20 0 14 0.07 1 1 0 0 0 0
...............................................................................CGCGCAGTGATGAAGCGAA...................................................................................................................................................................................................................................................... 19 2 14 0.07 1 0 0 0 0 1
........................................................................CGACGACCGCGCAGCAATGAAGCGA....................................................................................................................................................................................................................................................... 25 0 14 0.07 1 1 0 0 0 0
..................................................................................GCAGCTATGAAGCGACATCT.................................................................................................................................................................................................................................................. 20 3 15 0.07 1 1 0 0 0 0
............CTCCCGACCGCGGCAGCAAGCCGCAGA................................................................................................................................................................................................................................................................................................................. 27 0 18 0.06 1 1 0 0 0 0
.........................CAGCAAGCCGCAGATGCGACGC......................................................................................................................................................................................................................................................................................................... 22 0 19 0.05 1 1 0 0 0 0
.......................GGCAGCAAGCCGCAGATGCGAC........................................................................................................................................................................................................................................................................................................... 22 0 19 0.05 1 1 0 0 0 0
.........................................CGACGCTGCCACTGAAAACA........................................................................................................................................................................................................................................................................................... 20 1 20 0.05 1 1 0 0 0 0
.......................................................................GCGACGACCGCGCAGCAATG............................................................................................................................................................................................................................................................. 20 0 20 0.05 1 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_444:10428-10771 - dpe_1693 CTCGCGGCGGCAGAGGGCTGGCGCCGTCGTTCGGCGTCTACGCTGCGTCGGTGACTTTTGTCTCTCTTTCTCGCTGCTGGCGCGTCGTTACTTCGCTTTAGTTTTCCGAGTTTTTCTTCTGCCGTTGCTGTTGTGGGCTTTTGCTGTTGAACCACAGCCAAAATAATTAAAAAGTCTTCATTACCCTTCATTTTAAGAAAGGGCGCGATCCCGTTAACGCATGATGAACTTTTAGCGTGCCTCCTCTTCGGGGGTCATCCACTTCCCCATTTTGGCCATAAAGTGTGTCTCCAGCTTGCCGTTTCCAAGGAGGAGCTGCGGCTGAAGATGATACAGCGGGAGAG
dp5 Unknown_singleton_1832:410-549 + CTCGCCGCGGCAGAGGGCTAGCGCCGTCGTTCGACGTCTACGCTGCGCCGGTGACTTTCGTCTCTCTGTCTCGCTGCTGGCGCGTCGTTACTTCGCTTTAGTTTTCCGCGTTTCTCTTCTGCCGTTGCTGCCGTGGGC---------------------------------------------------------------------------------------------------------------------------TT---------------------------------------------------------------------------------
droWil2 scf2_1100000004577:432867-432953 - GTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCACCCTCCCGGTCTTAAAATATTTCTCGTT---------------------------------------------------GCAGTTAACA---CCAGAGGAAGAACTGCGCCTAAAGATGATACAACGCGAAAG
droVir3 scaffold_12963:17034294-17034351 - CG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCCGTTCCCGCATGATGAACTTTTGGCGTGCCTCCTCTTCGGGGGTCATCCACT---------------------------------------------------------------------------------
droMoj3 scaffold_6500:22051775-22051832 - CG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTCGTTCCCGCATGATGAACTTTTGGCGTGCCTCCTCTTCGGGGGTCATCCACT---------------------------------------------------------------------------------
droGri2 scaffold_15252:14468064-14468121 - CG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCCCGTTCCCGCATGATGAACTTTTGGCGTGCCTCCTCTTCGGGGGTCATCCACT---------------------------------------------------------------------------------
droAna3 scaffold_12916:2926747-2926806 + CGCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTCGCTCCCGCATGATGAACTTGTGGCGCGCCTCCTCCTCGGGGGTCATCAGCT---------------------------------------------------------------------------------
droBip1 scf7180000396737:1831703-1831762 - CGCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCGCGCTCCCGCATGATGAACTTTTGTCGCGCCTCCTCCTCCGGGGTCATCCACT---------------------------------------------------------------------------------
droKik1 scf7180000302684:108993-109052 - CGCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCCGCTCCCGCATGATGAACTTCTGGCGCGCCTCCTCCTCGGGTGTCATCCACT---------------------------------------------------------------------------------
droFic1 scf7180000451946:125-184 - CGCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCCGCTCCCGCATGATGAACTTCTGGCGCGCCTCCTCCTCGGGGGTCATCCACT---------------------------------------------------------------------------------
droEle1 scf7180000491338:1914011-1914070 - CGCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCCGCTCCCGCATGATGAACTTCTGTCGCGCCTCCTCCTCGGGGGTCATCCACT---------------------------------------------------------------------------------
droRho1 scf7180000766217:29320-29398 - ACTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCCTTCTTTTCCCATC-TCCGATTGCAGTTGACC---CCCGAGGAGGAGCTGCGACTGAAGATGATCCAGAGGGAGCG
droBia1 scf7180000302422:5737090-5737149 + CGCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCCGCTCCCGCATGATGAACTTTTGCCGCGCCTCCTCCTCGGGGGTCATCCACT---------------------------------------------------------------------------------
droTak1 scf7180000415867:144844-144903 - CGCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCCCGCTCCCGCATGATGAACTTTTGGCGCGCCTCCTCCTCGGGGGTCATCCACT---------------------------------------------------------------------------------
droEug1 scf7180000409066:81461-81520 + CGCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCCGCTCACGCATGATGAACTTGTGGCGGGCCTCCTCCTCGGGGGTCATCAGCT---------------------------------------------------------------------------------
dm3 chr2L:17972232-17972309 + TCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCATTCTGTTTCTGTA-TGCGCCTACAGTTGACC---CCCGATGAGGAGCTGCGACTGAAAATGATCCAAAGGGAGCG
droSim2 2l:17518582-17518659 + TCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCATTCTGTTTCTATA-TACGCCTACAGTTGACC---CCCGATGAGGAGCTGCGACTGAAAATTATCCAAAGGGAGCG
droSec2 scaffold_7:1607129-1607206 + TCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCATTCTGTTTCTATA-TACGTCTACAGTTGACC---CCCGATGAGGAGCTGCGACTGAAAATTATCCAAAGGGAGCG
droYak3 2R:3124076-3124153 - TTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTATTCTGTTTCTATA-TACGCCTACAGTTGACC---CCCGATGAGGAGATGCGACTGAAAATGATCCAAAGAGAGCG
droEre2 scaffold_4845:6294254-6294331 - TCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCATTCTGTTTCTATA-TACGCCTACAGTTGACC---CCCGATGAGGAGCTGCGACTGAAAATGATCCAAAGAGAGCG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
CTCGCGGCGGCAGAGGGCTGGCGCCGTCGTTCGGCGTCTACGCTGCGTCGGTGACTTTTGTCTCTCTTTCTCGCTGCTGGCGCGTCGTTACTTCGCTTTAGTTTTCCGAGTTTTTCTTCTGCCGTTGCTGTTGTGGGCTTTTGCTGTTGAACCACAGCCAAAATAATTAAAAAGTCTTCATTACCCTTCATTTTAAGAAAGGGCGCGATCCCGTTAACGCATGATGAACTTTTAGCGTGCCTCCTCTTCGGGGGTCATCCACTTCCCCATTTTGGCCATAAAGTGTGTCTCCAGCTTGCCGTTTCCAAGGAGGAGCTGCGGCTGAAGATGATACAGCGGGAGAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................................................TTACTTCGCTTTAGTTTTCCGAGT.........................................................................................................................................................................................................................................2413.003030000
.............................................................................................................................................................................................................................................................................................................TTTCCAAGGAGGAGCTGCGG.......................2022.004040000
...................................................................................................................................................................................................................CGTTAACGCATGATGAACTTTTAGC............................................................................................................2522.004040000
...................................................................................................................................................................................................................CGTTAACGCATGATGAACTTTTAGCG...........................................................................................................2621.503030000
...................................................TGACTTTTGTCTCTCTTTCTCGC..............................................................................................................................................................................................................................................................................2341.255050000
.............................................................................................................................................................................................................................................................................................................TTTCCAAGGAGGAGCTGCGGCTG....................2321.002020000
.............................................................................................................................TGCTGTTGTGGGCTTTTGCTGC.....................................................................................................................................................................................................2211.001010000
...............................................................................................................TTTTCTTCTGCCGTTGCTGT.....................................................................................................................................................................................................................2011.001010000
..............................................................................................................................................................................................................................................................................................................TTCCAAGGAGGAGCTGCGG.......................1921.002020000
.............................................................................................................................................................................................................................................................................................................TTTCCAAGGAGGAGCTGCGGC......................2121.002020000
...............................................................................................................................CTGTTGTGGGCTTTTGCTGTTG...................................................................................................................................................................................................2211.001010000
.............................................................................................................................................................................................................................................................................................................TTTCCAAGGAGGAGCTGCGGCTGA...................2421.002020000
...................................................................................................................................................................................................................................................................................CCATAAAGTGTGTCTCCAGCTTG..............................................2321.002020000
...................................................................................................................................................................................................................CGTTAACGCATGATGAACTTTTAG.............................................................................................................2421.002020000
...............................................................................................................................................................................................................................................................................TTGGCCATAAAGTGTGTCTCCAGCT................................................2520.501010000
...................................................TGACTTTTGTCTCTCTTTCTCGCTG............................................................................................................................................................................................................................................................................2540.502020000
.............................................................................................................................................................................................................................................................................................................TTTCCAAGGAGGAGCTGCGGCTGAA..................2520.501010000
...................................................TGACTTTTGTCTCTCTTTCTCGCT.............................................................................................................................................................................................................................................................................2440.502020000
...................................................................................................................................................................................................................................................................................CCATAAAGTGTGTCTCCAGC.................................................2020.501010000
....................................................................................................................................................................................................................GTTAACGCATGATGAACTTTTAGC............................................................................................................2420.501010000
..................................................................................................................................................................................................................................................................................................................................TGAAGATGATACAGCGGGAG..2020.501000001
.......................................................................................................................................................................................................................................................................................................TTGCCGTTTCCAAGGAGGAGCTGCGG.......................2620.501000001
......................................................................................................................................................................................................................TAACGCATGATGAACTTTTAGCGT..........................................................................................................2420.501010000
...............................................................................................................................................................................................................................................................................TTGGCCATAAAGTGTGTCTCC....................................................2120.501010000
...................................................TGACTTTTGTCTCTCTTTCTCGCTGC...........................................................................................................................................................................................................................................................................2640.502020000
................................................................................CGCGTCGTTACTTCGCTTTAGTTT................................................................................................................................................................................................................................................24110.273030000
.......................................................TTTTGTCTCTCTTTCTCGCTGC...........................................................................................................................................................................................................................................................................2240.251010000
.......................................................TTTTGTCTCTCTTTCTCGCTGCTGG........................................................................................................................................................................................................................................................................2540.251010000
.......................................................TTTTGTCTCTCTTTCTCGCTGCT..........................................................................................................................................................................................................................................................................2340.251010000
............................................................TCTCTCTTTCTCGCTGCTGGCGC.....................................................................................................................................................................................................................................................................2340.251010000
.........................................................TTGTCTCTCTTTCTCGCTGCTGG........................................................................................................................................................................................................................................................................2340.251010000
.......................................................TTTTGTCTCTCTTTCTCGCTGCTG.........................................................................................................................................................................................................................................................................2440.251010000
..............................................................................GGCGCGTCGTTACTTCGCTTTAGTTT................................................................................................................................................................................................................................................26100.202020000
.TCGCGGCGGCAGAGGGCTGGCTA................................................................................................................................................................................................................................................................................................................................23120.172200000
..............................................................................GGCGCGTCGTTACTTCGCTTTAGTT.................................................................................................................................................................................................................................................25100.101010000
...............................................................................GCGCGTCGTTACTTCGCTTTAGTTT................................................................................................................................................................................................................................................25100.101010000
.............................................................................TGGCGCGTCGTTACTTCGCTTTAGT..................................................................................................................................................................................................................................................25100.101010000
..............................................................................GGCGCGTCGTTACTTCGCTTTAG...................................................................................................................................................................................................................................................23100.101010000
.TCGCGGCGGCAGAGGGCTGGCGCC...............................................................................................................................................................................................................................................................................................................................24100.101010000
.................................................................................GCGTCGTTACTTCGCTTTAGTTT................................................................................................................................................................................................................................................23110.091010000
......................................................................................GTTACTTCGCTTTAGTTTTCC.............................................................................................................................................................................................................................................21120.081010000
........................................................................................TACTTCGCTTTAGTTTTCCG............................................................................................................................................................................................................................................20130.081010000
......................................................................TCGCTGCTGGCGCGTCGTTACTTC..........................................................................................................................................................................................................................................................24140.071010000
..........................................................................TGCTGGCGCGTCGTTACTTCGCTT......................................................................................................................................................................................................................................................24140.071010000
.......................................................................................TTACTTCGCTTTAGTTTTCCC............................................................................................................................................................................................................................................21140.071010000
....................................................................TCTCGCTGCTGGCGCGTCG.................................................................................................................................................................................................................................................................19150.071010000
.....................................................................CTCGCTGCTGGCGCGTCG.................................................................................................................................................................................................................................................................18150.071010000
.TCGCGGCGGCAGAGGGCTG....................................................................................................................................................................................................................................................................................................................................19170.061100000
..CGCGGCGGCAGAGGGCTG....................................................................................................................................................................................................................................................................................................................................18170.061100000
.............AGGGCTGGCGCCGTCGTTCGGCGTC..................................................................................................................................................................................................................................................................................................................25180.061010000
..........................TCGTTCGGCGTCTACGCTGCG.........................................................................................................................................................................................................................................................................................................21190.051010000
.......................CCGTCGTTCGGCGTCTACGCTGC..........................................................................................................................................................................................................................................................................................................23190.051010000
...........................CGTTCGGCGTCTACGCTGCG.........................................................................................................................................................................................................................................................................................................20190.051010000
........................CGTCGTTCGGCGTCTACGCTGC..........................................................................................................................................................................................................................................................................................................22200.051010000
.............AGGGCTGGCGCCGTCGTTCGGCG....................................................................................................................................................................................................................................................................................................................23200.051010000
.............AGGGCTGGCGCCGTCGTTCGG......................................................................................................................................................................................................................................................................................................................21200.051010000
.........................GTCGTTCGGCGTCTACGCTG...........................................................................................................................................................................................................................................................................................................20200.051010000
................GCTGGCGCCGTCGTTCGGC.....................................................................................................................................................................................................................................................................................................................19200.051100000
.........GCAGAGGGCTGGCGCCGTC............................................................................................................................................................................................................................................................................................................................19200.051100000
dp5
CTCGCCGCGGCAGAGGGCTAGCGCCGTCGTTCGACGTCTACGCTGCGCCGGTGACTTTCGTCTCTCTGTCTCGCTGCTGGCGCGTCGTTACTTCGCTTTAGTTTTCCGCGTTTCTCTTCTGCCGTTGCTGCCGTGGGC---------------------------------------------------------------------------------------------------------------------------TT---------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................TTACTTCGCTTTAGTTTTCCGCGTT........................................................................................................................................................................................................................................25119.001901900000000
........................................................................................TACTTCGCTTTAGTTTTCCGCGTT........................................................................................................................................................................................................................................2418.0080800000000
.......................................................................................TTACTTCGCTTTAGTTTTCCGCGTTTC......................................................................................................................................................................................................................................2716.0060600000000
.......................................................................................TTACTTCGCTTTAGTTTTCCGCGT.........................................................................................................................................................................................................................................2465.833503200002010
.......................................................................................TTACTTCGCTTTAGTTTTCCGCGTTT.......................................................................................................................................................................................................................................2615.0050500000000
...................................................TGACTTTCGTCTCTCTGTCTCGCTG............................................................................................................................................................................................................................................................................2551.6080800000000
...................................................TGACTTTCGTCTCTCTGTCTCGC..............................................................................................................................................................................................................................................................................2351.6080700000100
................................................................................................TTTAGTTTTCCGCGTTTC......................................................................................................................................................................................................................................1811.0010100000000
.......................................................................................TTACTTCGCTTTAGTTTTCCGCGTTTCT.....................................................................................................................................................................................................................................2811.0010100000000
........................................................................................TACTTCGCTTTAGTTTTCCGCGTTT.......................................................................................................................................................................................................................................2511.0010100000000
..................................................................................................TAGTTTTCCGCGTTTCTCTTCTGC..............................................................................................................................................................................................................................2411.0010100000000
.......................................................................................TTACTTCGCTTTAGTTTTCCGCG..........................................................................................................................................................................................................................................2360.6740300001000
...................................................TGACTTTCGTCTCTCTGTCTCGCT.............................................................................................................................................................................................................................................................................2450.6030200000010
.......................................................................................TTACTTCGCTTTAGTTTTCCG............................................................................................................................................................................................................................................2160.5030100000020
...............................................................................................................TTCTCTTCTGCCGTTGCTG......................................................................................................................................................................................................................19100.5050500000000
........................................................................................TACTTCGCTTTAGTTTTCCGCGT.........................................................................................................................................................................................................................................2360.5030300000000
.......................................................................................TTACTTCGCTTTAGTTTTCCGC...........................................................................................................................................................................................................................................2260.3320200000000
...........................................TGCGCCGGTGACTTTCGTCTCTCTG....................................................................................................................................................................................................................................................................................2540.2510000000010
...........................................................................................................GCGTTTCTCTTCTGCCGTTGCTGC.....................................................................................................................................................................................................................2480.2520200000000
.............................................CGCCGGTGACTTTCGTCTCTCTGTCT.................................................................................................................................................................................................................................................................................2640.2510100000000
.........................................................TCGTCTCTCTGTCTCGCTGCTGG........................................................................................................................................................................................................................................................................2340.2510100000000
...........................................................GTCTCTCTGTCTCGCTGCTGG........................................................................................................................................................................................................................................................................2140.2510100000000
...............................................................................................................TTCTCTTCTGCCGTTGCTGC.....................................................................................................................................................................................................................20100.2020200000000
..................................................................................................................TCTTCTGCCGTTGCTGCCGTGGGC---------------------------------------------------------------------------------------------------------------------------T..................................................................................2550.2010100000000
.....................................................................................................................TCTGCCGTTGCTGCCGTGGGC---------------------------------------------------------------------------------------------------------------------------T..................................................................................2250.2010100000000
................................................CGGTGACTTTCGTCTCTCTGTCTCGC..............................................................................................................................................................................................................................................................................2650.2010000000010
...................................................TGACTTTCGTCTCTCTGTCTCGCTGC...........................................................................................................................................................................................................................................................................2650.2010100000000
...................................................TGACTTTCGTCTCTCTGTCTCG...............................................................................................................................................................................................................................................................................2250.2010100000000
...................................................................................GTCGTTACTTCGCTTTAGTTTTCCGCGT.........................................................................................................................................................................................................................................2860.1710100000000
.....................................................................................................TTTTCCGCGTTTCTCTTCTGCCGTTG.........................................................................................................................................................................................................................2660.1710100000000
..................................................................................................................TCTTCTGCCGTTGCTGCCGTGGG...............................................................................................................................................................................................................2360.1710100000000
....................................................................................TCGTTACTTCGCTTTAGTTTTCCGCG..........................................................................................................................................................................................................................................2660.1710100000000
...................................................................................................................CTTCTGCCGTTGCTGCCGTGGG...............................................................................................................................................................................................................2260.1710100000000
.......................................................................................TTACTTCGCTTTAGTTTTCCGCGC.........................................................................................................................................................................................................................................2460.1710010000000
.......................................................................................TTACTTCGCTTTAGTTTTCC.............................................................................................................................................................................................................................................2060.1710000100000
..................................................................................................................TCTTCTGCCGTTGCTGCCGTG.................................................................................................................................................................................................................2160.1710100000000
................................................................................CGCGTCGTTACTTCGCTTTAGTT.................................................................................................................................................................................................................................................2370.1410100000000
.......................................................................................................TTCCGCGTTTCTCTTCTGCCGTTGC........................................................................................................................................................................................................................2570.1410100000000
...................................................................................................................CTTCTGCCGTTGCTGCCG...................................................................................................................................................................................................................1870.1410100000000
....................................................................................................................TTCTGCCGTTGCTGCCGTG.................................................................................................................................................................................................................1970.1410100000000
........................................................................................................TCCGCGTTTCTCTTCTGCCGTTG.........................................................................................................................................................................................................................2380.1310100000000
droWil2
GTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCACCCTCCCGGTCTTAAAATATTTCTCGTT---------------------------------------------------GCAGTTAACA---CCAGAGGAAGAACTGCGCCTAAAGATGATACAACGCGAAAGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
CG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCCGTTCCCGCATGATGAACTTTTGGCGTGCCTCCTCTTCGGGGGTCATCCACT---------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
CG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTCGTTCCCGCATGATGAACTTTTGGCGTGCCTCCTCTTCGGGGGTCATCCACT---------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
CG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCCCGTTCCCGCATGATGAACTTTTGGCGTGCCTCCTCTTCGGGGGTCATCCACT---------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
CGCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTCGCTCCCGCATGATGAACTTGTGGCGCGCCTCCTCCTCGGGGGTCATCAGCT---------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
CGCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCGCGCTCCCGCATGATGAACTTTTGTCGCGCCTCCTCCTCCGGGGTCATCCACT---------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
CGCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCCGCTCCCGCATGATGAACTTCTGGCGCGCCTCCTCCTCGGGTGTCATCCACT---------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CGCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCCGCTCCCGCATGATGAACTTCTGGCGCGCCTCCTCCTCGGGGGTCATCCACT---------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
CGCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCCGCTCCCGCATGATGAACTTCTGTCGCGCCTCCTCCTCGGGGGTCATCCACT---------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
ACTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCCTTCTTTTCCCATC-TCCGATTGCAGTTGACC---CCCGAGGAGGAGCTGCGACTGAAGATGATCCAGAGGGAGCGSizeHit CountTotal NormTotal
No Reads
droBia1
CGCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCCGCTCCCGCATGATGAACTTTTGCCGCGCCTCCTCCTCGGGGGTCATCCACT---------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
CGCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCCCGCTCCCGCATGATGAACTTTTGGCGCGCCTCCTCCTCGGGGGTCATCCACT---------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
CGCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCCGCTCACGCATGATGAACTTGTGGCGGGCCTCCTCCTCGGGGGTCATCAGCT---------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
TCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCATTCTGTTTCTGTA-TGCGCCTACAGTTGACC---CCCGATGAGGAGCTGCGACTGAAAATGATCCAAAGGGAGCGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................................................................................................................................................................................................................................................................................TTCTGTA-TGCGCCTACAGA.................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................GAAAATGATCCAAAGGGAGC.2012.0020000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................AGTTGACC---CCCGATGAGGAGCTGCGAC......................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................CTGAAAATGATCCAAAGGGAGCG2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................TGACC---CCCGATGAGGAGCTGCGAC......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TGCGACTGAAAATGATCCAAAGGGA...2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................TGACC---CCCGATGAGGAGCTGCGACTG....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..................................................................................................................................................................................................................................................................................TTTCTGTA-TGCGCCTACAGTTGACC---C........................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TACAGTTGACC---CCCGATGAGGAGC............................2411.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................GTTTCTGTA-TGCGCCTACA...................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................GATGAGGAGCTGCGACTGAAAATGAT............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TGCGACTGAAAATGATCCAAAGGG....2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................ATGAGGAGCTGCGACTGAAAA................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................GCTGCGACTGAAAATGATCCAAAGGGA...2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................GCTGCGACTGAAAATGATC...........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................CCCGATGAGGAGCTGCGACTGA...................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...........................................................................................................................................................................................................................................................................................................C---CCCGATGAGGAGCTGCGACTGAA..................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................ATTCTGTTTCTGTA-TGCGCC.......................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................TGACC---CCCGATGAGGAGCTGCGACTGA...................2711.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................GACC---CCCGATGAGGAGCTGCG........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................ATGAGGAGCTGCGACTGAAAATGATCC..........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
droSim2
TCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCATTCTGTTTCTATA-TACGCCTACAGTTGACC---CCCGATGAGGAGCTGCGACTGAAAATTATCCAAAGGGAGCGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
TCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCATTCTGTTTCTATA-TACGTCTACAGTTGACC---CCCGATGAGGAGCTGCGACTGAAAATTATCCAAAGGGAGCGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
TTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTATTCTGTTTCTATA-TACGCCTACAGTTGACC---CCCGATGAGGAGATGCGACTGAAAATGATCCAAAGAGAGCGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
TCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCATTCTGTTTCTATA-TACGCCTACAGTTGACC---CCCGATGAGGAGCTGCGACTGAAAATGATCCAAAGAGAGCGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 06/08/2015 at 04:34 PM