ID:

dpe_1672

 Coordinate:

scaffold_42:612716-612866 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.6 -16.1 -16.1

Flybase annnotation

exon [dper_GLEANR_20069:5]; CDS [Dper\GL18134-cds]; intron [Dper\GL18134-in]

No Repeatable elements found

mature
  1. scaffold_151:94805-94828 +
  2. scaffold_159:60404-60427 +
  3. scaffold_2299:18-41 +
  4. scaffold_442:4262-4285 +
  5. scaffold_72:33132-33155 +
  6. scaffold_72:83012-83035 +
  7. scaffold_57:88597-88620 +
  8. scaffold_53:100116-100139 +
  9. scaffold_129:15491-15514 +
  10. scaffold_146:65988-66011 +
  11. scaffold_100:203750-203773 +
  12. scaffold_2668:418-441 +
  13. scaffold_1410:2443-2466 +
  14. scaffold_1752:3099-3122 +
  15. scaffold_1812:1830-1853 +
  16. scaffold_2036:3099-3122 +
  17. scaffold_2329:1302-1325 +
  18. scaffold_9091:972-995 +
  19. scaffold_9136:342-365 +
  20. scaffold_574:370-393 +
  21. dpe_1672  scaffold_42:612803-612826 -
  22. scaffold_142:38302-38325 -
  23. scaffold_119:86931-86954 -
  24. scaffold_2:407185-407208 -
  25. scaffold_7:4385955-4385978 -
  26. scaffold_64:320162-320185 -
  27. scaffold_54:262956-262979 -
  28. scaffold_10758:341-364 -
  29. scaffold_189:2732-2755 -
  30. scaffold_256:27059-27082 -
  31. scaffold_487:2467-2490 -
  32. scaffold_108:14514-14537 -
  33. scaffold_114:16229-16252 -
  34. scaffold_98:67102-67125 -
  35. scaffold_2354:1242-1265 -
  36. scaffold_3011:1509-1532 -
  37. scaffold_3243:871-894 -
  38. scaffold_754:3397-3420 -
  39. scaffold_817:2699-2722 -
  40. scaffold_2336:2400-2423 -
star

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CCTCGTCAAACGTGCTAGACCTAACTCTTGTCACGGGAAAGAGTACCTTGGTATCTGACTGGAGAGTCCTCGAAAGACCATCCTCTCAGACATAAGTACATTCAGTTCAAGTGCGATTCAAACACTCTTCGAGATAACAGTCTATAGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNG
**************************************************...(((((..(((..(((.......)))..)))..))))).....((((...........))))...........(((...((((....))))..))).....................................................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V042
embryo
 V057
head
.............GCTAGACCTAACTCTTGTCACGGG...................................................................................................................................................................................................................... 24 0 20 0.25 5 5 0 0 0
.............GCTAGACCTAACTCTTGTCACGG....................................................................................................................................................................................................................... 23 0 20 0.25 5 5 0 0 0
.............GCTAGACCTAACTCTTGTCACGGGA..................................................................................................................................................................................................................... 25 0 20 0.20 4 4 0 0 0
.............GCTAGACCTAACTCTTGTCACGGGAA.................................................................................................................................................................................................................... 26 0 20 0.15 3 3 0 0 0
...........................................TACCTTGGTATCTGACTGGAGAGTCCTC.................................................................................................................................................................................... 28 0 20 0.10 2 1 1 0 0
..............CTAGACCTAACTCTTGTCACGGG...................................................................................................................................................................................................................... 23 0 20 0.10 2 2 0 0 0
................................................TGGTATCTGACTGGAGAGTCCTC.................................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0
..........................................................................................CATAAGTACATTCAGTTCAAGTGC......................................................................................................................................... 24 0 20 0.05 1 0 0 1 0
..............CTAGACCTAACTCTTGTCACGGGA..................................................................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0
..................ACCTAACTCTTGTCACGGGAA.................................................................................................................................................................................................................... 21 0 20 0.05 1 0 0 0 1
................................................TGGTATCTGACTGGAGAGTCC...................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0

Anti-sense strand reads

GGAGCAGTTTGCACGATCTGGATTGAGAACAGTGCCCTTTCTCATGGAACCATAGACTGACCTCTCAGGAGCTTTCTGGTAGGAGAGTCTGTATTCATGTAAGTCAAGTTCACGCTAAGTTTGTGAGAAGCTCTATTGTCAGATATCTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC
**************************************************...(((((..(((..(((.......)))..)))..))))).....((((...........))))...........(((...((((....))))..))).....................................................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V042
embryo
 V111
male body		 V057
head
 M021
embryo
 V050
head
GGAGCAGTTTGCACGATCTGGAT.................................................................................................................................................................................................................................... 23 0 20 28.90 578 532 41 4 0 0 1
.................................GCCCTTTCTCATGGAACCATAGACT................................................................................................................................................................................................. 25 0 20 2.50 50 49 1 0 0 0 0
............................................................................TGGTAGCAGAGTCTGTATTA........................................................................................................................................................... 20 2 1 2.00 2 0 0 2 0 0 0
GGAGCAGTTTGCACGATCTGGA..................................................................................................................................................................................................................................... 22 0 20 1.15 23 23 0 0 0 0 0
GGAGCAGTTTGCACGATCTGGATT................................................................................................................................................................................................................................... 24 0 20 1.05 21 17 4 0 0 0 0
..................................CCCTTTCTCATGGAACCATAGACT................................................................................................................................................................................................. 24 0 20 0.70 14 13 1 0 0 0 0
.GAGCAGTTTGCACGATCTGGAT.................................................................................................................................................................................................................................... 22 0 20 0.50 10 10 0 0 0 0 0
.......................................................................CTGACTGGTAGGAGAGTCTGG............................................................................................................................................................... 21 3 2 0.50 1 0 0 0 1 0 0
.............................................GGAACCATAGACTGACCTCTCAGGAGCTT................................................................................................................................................................................. 29 0 20 0.45 9 7 0 0 0 2 0
........TTGCACGATCTGGATTGAGAACAGT.......................................................................................................................................................................................................................... 25 0 20 0.40 8 8 0 0 0 0 0
GGAGCAGTTTGCACAATCTGGAT.................................................................................................................................................................................................................................... 23 1 20 0.40 8 8 0 0 0 0 0
.............................................GGAACCATAGACTGACCTCTCAGGAG.................................................................................................................................................................................... 26 0 20 0.40 8 8 0 0 0 0 0
.................................GCCCTTTCTCATGGAACCATAGACTGAC.............................................................................................................................................................................................. 28 0 20 0.30 6 6 0 0 0 0 0
GGAGCAGTTTGCACCATCTGGAT.................................................................................................................................................................................................................................... 23 1 20 0.30 6 6 0 0 0 0 0
................................................ACCATAGACTGACCTCTCAGGAGCTT................................................................................................................................................................................. 26 0 20 0.25 5 5 0 0 0 0 0
...............................................................................AGGAAGAGTCTGTATTCATGT....................................................................................................................................................... 21 3 5 0.20 1 1 0 0 0 0 0
.................................GCCCTTTCTCATGGAACCATAGAC.................................................................................................................................................................................................. 24 0 20 0.15 3 3 0 0 0 0 0
............ACGATCTGGATTGAGAACAGTGCCCT..................................................................................................................................................................................................................... 26 0 20 0.15 3 3 0 0 0 0 0
..............................AGTGCCCTTTCTCATGGAACCATAGACT................................................................................................................................................................................................. 28 0 20 0.15 3 3 0 0 0 0 0
...............................GTGCCCTTTCTCATGGAACCATAGACT................................................................................................................................................................................................. 27 0 20 0.15 3 3 0 0 0 0 0
...................................CCTTTCTCATGGAACCATAGACT................................................................................................................................................................................................. 23 0 20 0.15 3 3 0 0 0 0 0
.......................................................................................................................TGTGTGAGAAGGTCGATTGT................................................................................................................ 20 3 9 0.11 1 0 0 0 1 0 0
............................................................................................ATTCATGTAAGTCAAGTTCACGCT....................................................................................................................................... 24 0 20 0.10 2 2 0 0 0 0 0
.................CTGGATTGAGAACAGTGCCCTTTCT................................................................................................................................................................................................................. 25 0 20 0.10 2 2 0 0 0 0 0
.............CGATCTGGATTGAGAACAGTGCCCT..................................................................................................................................................................................................................... 25 0 20 0.10 2 2 0 0 0 0 0
...................................CCTTTCTCATGGAAGCATAGACT................................................................................................................................................................................................. 23 1 20 0.10 2 2 0 0 0 0 0
.....................................................AGACTGACCTCTCAGGAGCTTTCT.............................................................................................................................................................................. 24 0 20 0.10 2 2 0 0 0 0 0
.............................................GGAACCATAGACTGACCTCTCAGGAGCT.................................................................................................................................................................................. 28 0 20 0.10 2 2 0 0 0 0 0
GGAGCAGTTTGCACGATCTGGATC................................................................................................................................................................................................................................... 24 1 20 0.10 2 2 0 0 0 0 0
..................TGGATTGAGAACAGTGCCCTTTCT................................................................................................................................................................................................................. 24 0 20 0.10 2 2 0 0 0 0 0
.......TTTGCACGATCTGGATTGAGAACAGT.......................................................................................................................................................................................................................... 26 0 20 0.10 2 2 0 0 0 0 0
GGAGCAGTTTGCACGATCTGGATTGAG................................................................................................................................................................................................................................ 27 0 20 0.10 2 2 0 0 0 0 0
......................................TTCTCATGGAACCATAGACTGACCT............................................................................................................................................................................................ 25 0 20 0.10 2 2 0 0 0 0 0
..............................................GAACCATAGACTGACCTCTCAGGAGCTT................................................................................................................................................................................. 28 0 20 0.10 2 2 0 0 0 0 0
.....................................................AGACTGACCTCTCAGGAGCTTTCTGGT........................................................................................................................................................................... 27 0 20 0.10 2 2 0 0 0 0 0
.............CGATCTGGATTGAGAACAGTGCCCTT.................................................................................................................................................................................................................... 26 0 20 0.10 2 2 0 0 0 0 0
......................................................GACTGACCTCTCAGGAGCTTT................................................................................................................................................................................ 21 0 20 0.10 2 2 0 0 0 0 0
.............................................GGAACCATAGACTGACCTCTCAGGAGC................................................................................................................................................................................... 27 0 20 0.10 2 2 0 0 0 0 0
...................GGATTGAGAACAGTGCCCTTTCTCA............................................................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0
....................................CTTTCTCATGGAACCATAGACTGACCT............................................................................................................................................................................................ 27 0 20 0.05 1 1 0 0 0 0 0
............................................TGGAACCATAGACTGACCTCT.......................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0
........................................................................TGACTAGTAGGAGAGTCTG................................................................................................................................................................ 19 3 20 0.05 1 0 0 0 1 0 0
.........................................................TGACCTCTCAGGAGCTTTCTGGTAG......................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0
GGAGCAGTTTGCACGATCTGGATG................................................................................................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0
.........................AGAACAGTGCCCTTTCTCAT.............................................................................................................................................................................................................. 20 0 20 0.05 1 1 0 0 0 0 0
.................CTGGATTGAGAACAGTGCCCTTTCG................................................................................................................................................................................................................. 25 1 20 0.05 1 1 0 0 0 0 0
.....................................................AGACTGACCTCTCAGGAGCTTT................................................................................................................................................................................ 22 0 20 0.05 1 1 0 0 0 0 0
..................TGGATTGAGAACAGTGCCCTT.................................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0
.GAGCAGTTTGCACGTTCTGGATT................................................................................................................................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0
....CAGTTTGCACGATCTGGATTGAGAAC............................................................................................................................................................................................................................. 26 0 20 0.05 1 0 0 0 0 1 0
GGAGCAGTTTGCACGATCTGGATTGA................................................................................................................................................................................................................................. 26 0 20 0.05 1 1 0 0 0 0 0
.............................................GGAACCATAGACTGACCTCTCATGAG.................................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0
GGAGCACTTTGCACGATCTGGAT.................................................................................................................................................................................................................................... 23 1 20 0.05 1 0 1 0 0 0 0
.......................................TCTCATGGAACCATAGACTGACCTCTCA........................................................................................................................................................................................ 28 0 20 0.05 1 1 0 0 0 0 0
.......TTTGCACGATCTGGATTGAGAACAG........................................................................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0
...............ATCTGGATTGAGAACAGTGCCCTTTCT................................................................................................................................................................................................................. 27 0 20 0.05 1 1 0 0 0 0 0
.......................TGAGAACAGTGCCCTTTCTCAT.............................................................................................................................................................................................................. 22 0 20 0.05 1 1 0 0 0 0 0
.............CGATCTGGATTGAGAATAGTGCCCT..................................................................................................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0
GGAGCAGTTTGCACGATCTGGATTG.................................................................................................................................................................................................................................. 25 0 20 0.05 1 1 0 0 0 0 0
...ACAGTTTGCACGATCTGGATTGAGAAC............................................................................................................................................................................................................................. 27 1 20 0.05 1 1 0 0 0 0 0
GGAGCAGTTTGCACGATCGGGAT.................................................................................................................................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0
............ACGATCTGGATTGAGAACAGTGCCCTT.................................................................................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0
....................................................TAGACTGACCTCTCAGGAGCTT................................................................................................................................................................................. 22 0 20 0.05 1 1 0 0 0 0 0
................TCTGGATTGAGAACAGTGCCCTTTCTCAT.............................................................................................................................................................................................................. 29 0 20 0.05 1 1 0 0 0 0 0
............................ACAGTGCCCTTTCTCATGGAAC......................................................................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0
.......................................................................CTGACTAGTAGGAGAGTCT................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 1
......................................TTCTCATGGAACCATAGACTGACC............................................................................................................................................................................................. 24 0 20 0.05 1 1 0 0 0 0 0
..................................CCCTTTCTCATGGAACCATAGACTGACCT............................................................................................................................................................................................ 29 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................CATTCATGTAAGTCAAGTTCACGC........................................................................................................................................ 24 1 20 0.05 1 1 0 0 0 0 0
CGAGCAGTTTGCACGATCTGGAT.................................................................................................................................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0
GAAGCAGTTTGCACGATCTGGAT.................................................................................................................................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0
....CAGTTTGCACGATCTGGATTGAGAA.............................................................................................................................................................................................................................. 25 0 20 0.05 1 1 0 0 0 0 0
........TTGCACGATCTGGATTGAGAACAAT.......................................................................................................................................................................................................................... 25 1 20 0.05 1 0 0 1 0 0 0
GGAGCAGTTTGCACGATCTGGAG.................................................................................................................................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0
GGAGCAGTTTGCAAGATCTGGA..................................................................................................................................................................................................................................... 22 1 20 0.05 1 1 0 0 0 0 0
TGAGCTGTTTGCACGATCTGGAT.................................................................................................................................................................................................................................... 23 2 20 0.05 1 0 1 0 0 0 0
..AGCAGTTTGCACGATCTGGATTGAGA............................................................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0
...............................................AACCATAGACTGACCTCTCAGGAGCT.................................................................................................................................................................................. 26 0 20 0.05 1 1 0 0 0 0 0
.....................................TTTCTCATGGAACCATAGACTGACCTCT.......................................................................................................................................................................................... 28 0 20 0.05 1 0 0 0 0 1 0
...............................................AGCCATAGACTGACCTCTCAGGAGC................................................................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0
...........................AACAGTGCCCTTTCTCATGGAACCATAG.................................................................................................................................................................................................... 28 0 20 0.05 1 1 0 0 0 0 0
...................................CCTTTCTCATGGAACCATAGACCGAC.............................................................................................................................................................................................. 26 1 20 0.05 1 1 0 0 0 0 0
................................AGCCCTTTCTCATGGAACCATAGACT................................................................................................................................................................................................. 26 1 20 0.05 1 1 0 0 0 0 0
.................................................................................................TGTAAGTCTAGTTCACGCT....................................................................................................................................... 19 1 20 0.05 1 0 1 0 0 0 0
............................................CGGAACCATAGACTGACCTCTCAGGA..................................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0
TGAGCAGTTTGCACGATCTGGAT.................................................................................................................................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0
.................................GCCCTTTCTCATGGAACCATACT................................................................................................................................................................................................... 23 2 20 0.05 1 1 0 0 0 0 0
.....................................TTTCTCATGGAACCATAGACTGAC.............................................................................................................................................................................................. 24 0 20 0.05 1 1 0 0 0 0 0
.............................................GGAACCATAGACTGACCTCTCAGG...................................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0
....CAGTTTGCACGATCTGGAT.................................................................................................................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0
.............CGATCTGGATTGAGAACAGTGCCCTTTCT................................................................................................................................................................................................................. 29 0 20 0.05 1 1 0 0 0 0 0
GGAGCAGTTTGCACGCTCTGGATT................................................................................................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0
................................................ACCATAGACTGACCTCTCAGGAGCT.................................................................................................................................................................................. 25 0 20 0.05 1 1 0 0 0 0 0
................................TGCCCTTTCTCATGGAACCATAGACTGAC.............................................................................................................................................................................................. 29 0 20 0.05 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_42:612666-612916 - dpe_1672 CCTCGTCAAACGTGC-TAGACCTAACTCTTGTCACG--GGAAAGAGTACCTT-GGTATCTGACTGGAGAGTCCTCGAAAGACCATCC-TCTCAGA-CATAAGTACATTCAGTTCAAGTGCGA-TTCAAACACTCTTCG-AGATAACAGTCTATAGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNG
dp5 Unknown_singleton_3637:188-341 + CCTCGTCAAACGTGC-TAGACCTAACTCTTGTCACG--GGAAAGAGTACCTT-GGTATCTGACTGGAGAGTCCTCGAAAGACCATCCTTCTCAGACCATAAGTACATTCAGTTCAAGTGCGAATTCAAACACTCTTCGAAGATAACAGTCTATAGAAA-----------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004943:827679-827748 - CCTCATCTAATGTGC-AAGACCTAACACTAACTACT--GGCGAAGACGTAGA-CATAACAGAACGGAGGATCCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_14906:9090548-9090694 - TCAGGGAAGAGGTGC-TAGACATCACCCTGATCAATCGGTCCATAGCACCTCACCTTAGGGACTGGCATGTTTCCCAAGAGGAATCCATGTCTGATCATAGGACTATTCTATTTAACTTAAAATT-AAAT-------ACAGATAGTAGC--ACACAAA-----------------------------------------------------------------------------------------------------
droAna3 scaffold_13089:701690-701838 - ACAGGAGAGAGGTTC-TTGACATTACATTATTCTCGCACTCCCTGGCTCATGCAATCACCAGCTGGAGAGTCCTAGACAAACACTCCTTTTCAGACCACCGCTACATTGAGCCGTA----CATTTTGAAAACTTCACCAAGCAAGCAGTTCGTA---------------------------------------------------------------------------------------------------------
droBip1 scf7180000395593:6757-6883 - ACAGAAGAGAAGTAC-TTGACGTCACTCTTTACTCTGAATAACTAGCAGACAGGATTGTTAGATGGGGAGTCCTAGAGAAACACTCATTCTCAGACCACCGATACATAGAATTAGTGGTCAACTTCGA-----------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000301572:11065-11218 + CCTCCTCAAACGTGC-TAGATCTTACTCTTGTAAGG--GGACAAGGTACTTT-GGTATCAGAATGGAGAGTCCTTGAGAGACCATCCTTCTCAGATCATAAGTACATACGGTTCCAATACGCATTCGAACACTCTCCAAAAAAATCAGTCTTCAGGAA-----------------------------------------------------------------------------------------------------
droFic1 scf7180000452125:9725-9807 - CCTTGTCTAACCTGC-TTGACCTAACAGTTGTAACG--GGACGGAG-ACTCT-GGTAGCTGGATGGAAAGTTCTTAAAAGAACATCCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000490322:6313-6462 + TCTTGTCAAACTTAC-TAGACCTAACACTCGTAGCG--GGACAAAATACTCT-GGTATCTGGATGGCGAGTCCTCGA----TTCTTCTTCTTAAATCATAAGTATATTCTGTTCAACTTTGACTTCAAACACTCTTCAAGGCTAGCAATCTACAGGGA-----------------------------------------------------------------------------------------------------
droRho1 scf7180000763020:6183-6211 - ACGTGCCAAACGATCATAGATCTAACCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302042:31069-31222 + CCTCGTCAAACGTGC-TAGATATAACCCTTGAAAGG--GGGCAGAGTACTTT-GGTCTTAAAATGGAGAGAACAAAATACACCACCCTTTTTAGACCATAGGTATATTCAGTTCAGGGACGAATTTAAAAGTATTCCAAAGGTAATTGTCTATAAAAA-----------------------------------------------------------------------------------------------------
droTak1 scf7180000414451:15593-15746 - CCTCGTCAAACGAGC-TAGATATAACACTTGTAAAG--GGACAGAGTACTTT-GGTCTCCGAATGGAGGGTCCTAAAAACACCATCTTTCTCGGACCATAGGTATATTCAGTTTAGATATGATTTTAAAAGCACTCCGAAGGTAGCTGTCTATAGAAA-----------------------------------------------------------------------------------------------------
droYak3 v2_chrUn_645:22378-22531 - CCTCCTCGAACGTGC-TAGACCTAACACTCGAAAGG--GGACAAAGTACTAT-GGTTTCAGAATGGAAAGTCCTTGAGAGACCATCTTTCTCAGATTATAAGTACATGCAATTCCTATGCGAATTCGAACACTCTCCCAAAATAACCACTTTCAGAAA-----------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
CCTCGTCAAACGTGC-TAGACCTAACTCTTGTCACG--GGAAAGAGTACCTT-GGTATCTGACTGGAGAGTCCTCGAAAGACCATCC-TCTCAGA-CATAAGTACATTCAGTTCAAGTGCGA-TTCAAACACTCTTCG-AGATAACAGTCTATAGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............GC-TAGACCTAACTCTTGTCACG--GG...........................................................................................................................................................................................................................24200.255050000
.............GC-TAGACCTAACTCTTGTCACG--G............................................................................................................................................................................................................................23200.255050000
.............GC-TAGACCTAACTCTTGTCACG--GGA..........................................................................................................................................................................................................................25200.204040000
.............GC-TAGACCTAACTCTTGTCACG--GGAA.........................................................................................................................................................................................................................26200.153030000
..............................................TACCTT-GGTATCTGACTGGAGAGTCCTC........................................................................................................................................................................................28200.102110000
..............C-TAGACCTAACTCTTGTCACG--GG...........................................................................................................................................................................................................................23200.102020000
...................................................T-GGTATCTGACTGGAGAGTCCTC........................................................................................................................................................................................23200.051010000
................................................................................................CATAAGTACATTCAGTTCAAGTGC...........................................................................................................................................24200.051001000
..............C-TAGACCTAACTCTTGTCACG--GGA..........................................................................................................................................................................................................................24200.051010000
...................ACCTAACTCTTGTCACG--GGAA.........................................................................................................................................................................................................................21200.051000010
...................................................T-GGTATCTGACTGGAGAGTCC..........................................................................................................................................................................................21200.051010000
dp5
CCTCGTCAAACGTGC-TAGACCTAACTCTTGTCACG--GGAAAGAGTACCTT-GGTATCTGACTGGAGAGTCCTCGAAAGACCATCCTTCTCAGACCATAAGTACATTCAGTTCAAGTGCGAATTCAAACACTCTTCGAAGATAACAGTCTATAGAAA-----------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................................................................TCAGTTCAAGTGCGAATTCAAACAC...............................................................................................................................25172.764703970001000
.............GC-TAGACCTAACTCTTGTCACG--G............................................................................................................................................................................................................................23142.573602800000710
.............GC-TAGACCTAACTCTTGTCACG--GG...........................................................................................................................................................................................................................24142.363302300000820
...................................................................................................AAGTACATTCAGTTCAAGTGCG..........................................................................................................................................22202.004003310000510
..............................................TACCTT-GGTATCTGACTGGAGAGTCC..........................................................................................................................................................................................2662.001201200000000
...........................................................................................................TCAGTTCAAGTGCGAATTCAAACA................................................................................................................................24171.763002910000000
...................................................................................................AAGTACATTCAGTTCAAGTGC...........................................................................................................................................21201.603202600300300
...................................................................................................AAGTACATTCAGTTCAAGTGCGAAT.......................................................................................................................................25201.553102300000530
.............GC-TAGACCTAACTCTTGTCACG--GGA..........................................................................................................................................................................................................................25141.361901600001200
..............................................TACCTT-GGTATCTGACTGGAGAGT............................................................................................................................................................................................2471.2990700101000
.............................TGTCACG--GGAAAGAGTACCTT-G.............................................................................................................................................................................................................22121.171401400000000
...........................................................................................................TCAGTTCAAGTGCGAATTCAAAC.................................................................................................................................23170.941601600000000
.............................TGTCACG--GGAAAGAGTACCTT-GG............................................................................................................................................................................................................23110.911001000000000
.....................................................................................................GTACATTCAGTTCAAGTGCGAAT.......................................................................................................................................23200.751501400001000
.............................TGTCACG--GGAAAGAGTACCTT-GGT...........................................................................................................................................................................................................24110.7380700001000
...................................................................................................AAGTACATTCAGTTCAAGTGCGA.........................................................................................................................................23200.70140900100310
...................................................T-GGTATCTGACTGGAGAGTCCTCG.......................................................................................................................................................................................24120.6780700000100
..............................................TACCTT-GGTATCTGACTGGAGAGTC...........................................................................................................................................................................................2560.6740400000000
..........................................................................................................TTCAGTTCAAGTGCGAATTCAAACA................................................................................................................................25170.651101100000000
.............GC-TAGACCTAACTCTTGTCACG--.............................................................................................................................................................................................................................22140.5780800000000
..............................................TACCTT-GGTATCTGACTGGAGAG.............................................................................................................................................................................................2370.5740400000000
..............................................TACCTT-GGTATCTGACTGGAGA..............................................................................................................................................................................................2270.5740400000000
..............C-TAGACCTAACTCTTGTCACG--G............................................................................................................................................................................................................................22150.4770400000210
.............................TGTCACG--GGAAAGAGTACCTT-GGTA..........................................................................................................................................................................................................25110.4550500000000
...................................................................................................AAGTACATTCAGTTCAAGTGCGAA........................................................................................................................................24200.4080400000400
..............C-TAGACCTAACTCTTGTCACG--GG...........................................................................................................................................................................................................................23150.4060400000200
...................................................................................................AAGTACATTCAGTTCAAGTGCGAATT......................................................................................................................................26200.4080800000000
...................................................T-GGTATCTGACTGGAGAGTCCT.........................................................................................................................................................................................22130.3850500000000
...........................................................................................................TCAGTTCAAGTGCGAATTCAAACACG..............................................................................................................................26170.3560600000000
................................................................................................CATAAGTACATTCAGTTCAAGTGC...........................................................................................................................................24200.3570610000000
..............................GTCACG--GGAAAGAGTACCTT-GG............................................................................................................................................................................................................22120.3340400000000
..............................................TACCTT-GGTATCTGACTGGAG...............................................................................................................................................................................................2190.3330300000000
...................................................T-GGTATCTGACTGGAGAGTC...........................................................................................................................................................................................20130.3140400000000
...................................................T-GGTATCTGACTGGAGAGTCC..........................................................................................................................................................................................21130.3140400000000
..............................GTCACG--GGAAAGAGTACCTT-G.............................................................................................................................................................................................................21130.3140400000000
...............................................................................................CCATAAGTACATTCAGTTCAAGTG............................................................................................................................................24200.3060401000100
..........................................................................................................TTCAGTTCAAGTGCGAATTCAAACAC...............................................................................................................................26170.2950500000000
.............GC-TAGACCTAACTCTTGTCAC................................................................................................................................................................................................................................21140.2940400000000
...........................................................................................................TCAGTTCAAGTGCGAATTCAAACACT..............................................................................................................................26110.2730300000000
...........................................................................................................TCAGTTCAAGTGCGAATTCAAACACTC.............................................................................................................................27110.2730300000000
..............C-TAGACCTAACTCTTGTCACG--GGA..........................................................................................................................................................................................................................24150.2740100000300
..................................................TT-GGTATCTGACTGGAGAGTCCT.........................................................................................................................................................................................23120.2530000000300
...............................................................................................CCATAAGTACATTCAGTTCAAGT.............................................................................................................................................23200.2550401000000
...................................................T-GGTATCTGACTGGAGAGTCCTCGAA.....................................................................................................................................................................................26120.2530300000000
...................................................T-GGTATCTGACTGGAGAGTCCTCGA......................................................................................................................................................................................25120.2530300000000
.................................................CTT-GGTATCTGACTGGAGAGTCCTCGAA.....................................................................................................................................................................................2850.2011000000000
...............................................................................................CCATAAGTACATTCAGTTCAAGTGC...........................................................................................................................................25200.2040300100000
.....................................................................................................GTACATTCAGTTCAAGTGCGAATTC.....................................................................................................................................25200.2040400000000
..............................................TACCTT-GGTATCTGACTGG.................................................................................................................................................................................................19100.2020000000020
................TAGACCTAACTCTTGTCACG--GGAA.........................................................................................................................................................................................................................24150.2030300000000
...................................................................................................AAGTACATTCAGTTCAAGT.............................................................................................................................................19200.2040300001000
....................................................................................................AGTACATTCAGTTCAAGTGCGAAT.......................................................................................................................................24200.2040300100000
...........................................................................................................TCAGTTCAAGTGCGAATTCAAACACTCT............................................................................................................................28110.1820100001000
.............................TGTCACG--GGAAAGAGTACCTT-GGTATC........................................................................................................................................................................................................27110.1820200000000
..................................................TT-GGTATCTGACTGGAGAGTCCTCG.......................................................................................................................................................................................25110.1820200000000
..........................................................................................................TTCAGTTCAAGTGCGAATTCAAAC.................................................................................................................................24170.1830300000000
..............................................TACCTT-GGTATCTGACTGGAGAGTCCT.........................................................................................................................................................................................2760.1710100000000
................................................CCTT-GGTATCTGACTGGAGAGTCC..........................................................................................................................................................................................2460.1710100000000
..............................GTCACG--GGAAAGAGTACCTT-GGT...........................................................................................................................................................................................................23120.1720200000000
..............................GTCACG--GGAAAGAGTACCTT-GGTATC........................................................................................................................................................................................................26120.1720200000000
.............................TGTCACG--GGAAAGAGTACCTT-..............................................................................................................................................................................................................21120.1720200000000
................................................CCTT-GGTATCTGACTGGAGAGTC...........................................................................................................................................................................................2360.1710000000100
..................................................................................................................................ACTCTTCGAAGATAACAGTCTATAG........................................................................................................25130.1520000000200
..................................................TT-GGTATCTGACTGGAGA..............................................................................................................................................................................................18130.1520200000000
...................................................T-GGTATCTGACTGGAGAGTCCTC........................................................................................................................................................................................23130.1520200000000
.............................................................................................................................CAAACACTCTTCGAAGATAACAGTC.............................................................................................................25130.1520100000100
...................................................................................................AAGTACATTCAGTTCAAGTGCGAAA.......................................................................................................................................25200.1530300000000
....................................................................................................AGTACATTCAGTTCAAGTGCGAATT......................................................................................................................................25200.1530300000000
................................................................................................CATAAGTACATTCAGTTCAAGTGCG..........................................................................................................................................25200.1530300000000
....................................................................................................AGTACATTCAGTTCAAGTGCGA.........................................................................................................................................22200.1530300000000
................TAGACCTAACTCTTGTCACG--G............................................................................................................................................................................................................................21150.1320100000100
.......................................................TATCTGACTGGAGAGTCCTCGAAA....................................................................................................................................................................................24150.1320200000000
................TAGACCTAACTCTTGTCACG--GGAAAG.......................................................................................................................................................................................................................26150.1320100000100
...................................................................................................AAGTACATTCAGTTCAAGTGCGAATTCA....................................................................................................................................28150.1320000000200
..............C-TAGACCTAACTCTTGTCAC................................................................................................................................................................................................................................20150.1320200000000
..........................................AGAGTACCTT-GGTATCTGACTGGAG...............................................................................................................................................................................................2580.1310000000010
.......AAACGTGC-TAGACCTAACTCTTGTC..................................................................................................................................................................................................................................2580.1310100000000
.......AAACGTGC-TAGACCTAACTCTTG....................................................................................................................................................................................................................................2380.1310100000000
.........................................................................................................ATTCAGTTCAAGTGCGAATTCAAACA................................................................................................................................26160.1320200000000
.........................................................................................................ATTCAGTTCAAGTGCGAATTCAAACAC...............................................................................................................................27160.1320200000000
.......AAACGTGC-TAGACCTAACTCTTGT...................................................................................................................................................................................................................................2480.1310100000000
..........................................................................................................TTCAGTTCAAGTGCGAATTCAAACACG..............................................................................................................................27170.1220200000000
..........................................................................................................TTCAGTTCAAGTGCGAATTCAAA..................................................................................................................................23170.1220200000000
................................................CCTT-GGTATCTGACTGGAG...............................................................................................................................................................................................1990.1110100000000
.........ACGTGC-TAGACCTAACTCTTGTCTAA--.............................................................................................................................................................................................................................2690.1110100000000
.........ACGTGC-TAGACCTAACTCTTGTC..................................................................................................................................................................................................................................2390.1110100000000
...................................................................................................AAGTACATTCAGTTCAAGTG............................................................................................................................................20200.1020200000000
...............................................................................................CCATAAGTACATTCAGTTCAAGTGCGA.........................................................................................................................................27200.1020200000000
.....................................................................................................GTACATTCAGTTCAAGTGCG..........................................................................................................................................20200.1020100001000
...............................................................................................CCATAAGTACATTCAGTTCAAG..............................................................................................................................................22200.1020200000000
................................................................................................CATAAGTACATTCAGTTCAAG..............................................................................................................................................21200.1020200000000
................................................................................................CATAAGTACATTCAGTTCAAGT.............................................................................................................................................22200.1020200000000
.....................................................................................................GTACATTCAGTTCAAGTGCGAATAA.....................................................................................................................................25200.1020200000000
...........GTGC-TAGACCTAACTCTTG....................................................................................................................................................................................................................................19100.1010100000000
............................................................................................................................TCAAACACTCTTCGAAGATAACAGTC.............................................................................................................26100.1010100000000
..................................................................................................TAAGTACATTCAGTTCAAGTGCG..........................................................................................................................................23200.1020200000000
............TGC-TAGACCTAACTCTTGTCACG--G............................................................................................................................................................................................................................24110.0910100000000
..........................................................................................................TTCAGTTCAAGTGCGAATTCAAACACTC.............................................................................................................................28110.0910100000000
............................TTGTCACG--GGAAAGAGTACCTT-GGT...........................................................................................................................................................................................................25110.0910100000000
..............................GTCACG--GGAAAGAGTACCTT-GGTAT.........................................................................................................................................................................................................25120.0810100000000
.............................TGTCACG--GGAAAGAGTACC.................................................................................................................................................................................................................19120.0810100000000
...............................TCACG--GGAAAGAGTACCTT-GGT...........................................................................................................................................................................................................22120.0810100000000
..................................................TT-GGTATCTGACTGGAGAGTCC..........................................................................................................................................................................................22120.0810100000000
..............................GTCACG--GGAAAGAGTACCTT-GGTA..........................................................................................................................................................................................................24120.0810100000000
............................TTGTCACG--GGAAAGAGTACCTT-..............................................................................................................................................................................................................22120.0810100000000
...................................................T-GGTATCTGACTGGAGAGTCT..........................................................................................................................................................................................21130.0810000000100
..............................GTCACG--GGAAAGAGTACCTT-..............................................................................................................................................................................................................20130.0810100000000
................TAGACCTAACTCTTGTCACG--GGAAAGAG.....................................................................................................................................................................................................................28140.0710000001000
.............GC-TAGACCTAACTCTTGTCACG--GGAA.........................................................................................................................................................................................................................26140.0710100000000
....................................................................................................................................TCTTCGAAGATAACAGTCTATAGA.......................................................................................................24140.0710100000000
.......................................................TATCTGACTGGAGAGTCCTCGAAAG...................................................................................................................................................................................25140.0710100000000
...................................................T-GGTATCTGACTGGAGAGT............................................................................................................................................................................................19140.0710000100000
.............GC-TAGACCTAACTCTTGTCA.................................................................................................................................................................................................................................20140.0710100000000
.....................................................................................................GTACATTCAGTTCAAGTGCGAATTCAA...................................................................................................................................27150.0710100000000
..................GACCTAACTCTTGTCACG--GGAAAGAG.....................................................................................................................................................................................................................26150.0710100000000
................TAGACCTAACTCTTGTCACG--GGA..........................................................................................................................................................................................................................23150.0710100000000
.........................................................TCTGACTGGAGAGTCCTCGAAAGACC................................................................................................................................................................................26150.0710100000000
..............C-TAGACCTAACTCTTGTCACG--GGAC.........................................................................................................................................................................................................................25150.0710100000000
.....................................................................................................GTACATTCAGTTCAAGTGCGAATTCA....................................................................................................................................26150.0710100000000
.......................................................TATCTGACTGGAGAGTCCTCGAA.....................................................................................................................................................................................23150.0710010000000
.........................................................TCTGACTGGAGAGTCCTCGAAAGACCA...............................................................................................................................................................................27150.0710100000000
.................................................................................................................................CACTCTTCGAAGATAACAGTCTATA.........................................................................................................25150.0710000000010
..............C-TAGACCTAACTCTTGTCACG--.............................................................................................................................................................................................................................21150.0710000000010
......................................................................................................TACATTCAGTTCAAGTGCGAATTCA....................................................................................................................................25160.0610100000000
........................................................................................................CATTCAGTTCAAGTGCGAATTCAAACAC...............................................................................................................................28160.0610100000000
.........................................................TCTGACTGGAGAGTCCTCGAAAGA..................................................................................................................................................................................24160.0610100000000
.....................................................................................................GTACATTCAGTTCAAGTGCGAATTCAAAA.................................................................................................................................29160.0610100000000
...........................................................TGACTGGAGAGTCCTCGAAAGACC................................................................................................................................................................................24160.0610000001000
..........................................................CTGACTGGAGAGTCCTCGAAAGA..................................................................................................................................................................................23160.0610100000000
..........................................................................................................TTCAGTTCAAGTGCGAATTCA....................................................................................................................................21170.0610100000000
..............................................................................................................GTTCAAGTGCGAATTCAAACAC...............................................................................................................................22170.0610100000000
............................................................................................................CAGTTCAAGTGCGAATTCAAACAC...............................................................................................................................24170.0610100000000
........AACGTGC-TAGACCTAACTCT......................................................................................................................................................................................................................................20170.0610100000000
.........................................................TCTGACTGGAGAGTCCTCG.......................................................................................................................................................................................19170.0610100000000
...........................................................................................................TCAGTTCAAGTGCGAATTCAAA..................................................................................................................................22170.0610100000000
..................GACCTAACTCTTGTCACG--GGA..........................................................................................................................................................................................................................21170.0610100000000
.............................................................................................................AGTTCAAGTGCGAATTCAAACAC...............................................................................................................................23170.0610010000000
...............................................................................................CCATAAGTACATTCAGTTCAAGTGCGAA........................................................................................................................................28190.0510100000000
.................................................................................................ATAAGTACATTCAGTTCAAGTGCGAAT.......................................................................................................................................27200.0510100000000
...................................................................................................AAGTACATTCAGTTCAAGTGCGAAG.......................................................................................................................................25200.0510100000000
.....................................................................GTCCTCGAAAGACCATCCTTCTCAGA....................................................................................................................................................................26200.0510100000000
..............................................................................AGACCATCCTTCTCAGACC..................................................................................................................................................................19200.0510100000000
.....................................................................................................GTACATTCAGTTCAAGTGCGAATA......................................................................................................................................24200.0510100000000
...................................................................................................AAGTACATTCAGTTCAAGA.............................................................................................................................................19200.0510100000000
......................................................................................................TACATTCAGTTCAAGTGCGAA........................................................................................................................................21200.0510000001000
....................................................................................................AGTACATTCAGTTCAAGTGCG..........................................................................................................................................21200.0510100000000
...............................................................................................CCATAAGTACATTCAGTTCAAGTGCG..........................................................................................................................................26200.0510100000000
......................................................................................................TACATTCAGTTCAAGTGCGAATT......................................................................................................................................23200.0510100000000
...................................................................................................AAGTACATTCAGTTCAAGTGCGAATA......................................................................................................................................26200.0510100000000
................................................................................................CATAAGTACATTCAGTTCAAGTG............................................................................................................................................23200.0510100000000
....................................................................................................AGTACATTCAGTTCAAGTGCGAATA......................................................................................................................................25200.0510100000000
................................................................................................CATAAGTACATTCAGTTCAAGTGCGA.........................................................................................................................................26200.0510100000000
...................................................................................ATCCTTCTCAGACCATAAGTACATTCA.....................................................................................................................................................27200.0510000000100
.......................AACTCTTGTCACG--GGAAAGA......................................................................................................................................................................................................................20200.0510100000000
........................................................................................................CATTCAGTTCAAGTGCGAATT......................................................................................................................................21200.0510100000000
...................................................................................................AAGTACATTCAGTTCAAG..............................................................................................................................................18200.0510100000000
.........................................................................................................ATTCAGTTCAAGTGCGAAT.......................................................................................................................................19200.0510100000000
..............................................................................AGACCATCCTTCTCAGACCAT................................................................................................................................................................21200.0510100000000
.......................................................................................TTCTCAGACCATAAGTACATTCAG....................................................................................................................................................24200.0510100000000
..............................................................................AGACCATCCTTCTCAGACCATA...............................................................................................................................................................22200.0510100000000
...............................................................................................CCATAAGTACATTCAGTTCA................................................................................................................................................20200.0510100000000
.....................................................................................................GTACATTCAGTTCAAGTGCGA.........................................................................................................................................21200.0510100000000
........................................................................................TCTCAGACCATAAGTACATTCAGTT..................................................................................................................................................25200.0510100000000
...............................................................................GACCATCCTTCTCAGACCAT................................................................................................................................................................20200.0510010000000
droWil2
CCTCATCTAATGTGC-AAGACCTAACACTAACTACT--GGCGAAGACGTAGA-CATAACAGAACGGAGGATCCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................A-CATAACAGAACGGAGGATCC..........................................................................................................................................................................................2111.00101000
droGri2
TCAGGGAAGAGGTGC-TAGACATCACCCTGATCAATCGGTCCATAGCACCTCACCTTAGGGACTGGCATGTTTCCCAAGAGGAATCCATGTCTGATCATAGGACTATTCTATTTAACTTAAAATT-AAAT-------ACAGATAGTAGC--ACACAAA-----------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..........................................................................................TCTGATCATAGGACTATTCTATTTAAC..............................................................................................................................................2711.00110
droAna3
ACAGGAGAGAGGTTC-TTGACATTACATTATTCTCGCACTCCCTGGCTCATGCAATCACCAGCTGGAGAGTCCTAGACAAACACTCCTTTTCAGACCACCGCTACATTGAGCCGTA----CATTTTGAAAACTTCACCAAGCAAGCAGTTCGTA---------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................TAGACAAACACTCCTTTTCAGACCA.................................................................................................................................................................25200.102200000
................................................................................................................................AAACTTCACCAAGCAAGCAGTT.............................................................................................................22200.051010000
.......................................................TCACCAGCTGGAGAGTCCTAGACAAA..................................................................................................................................................................................26200.051100000
.............................................................................CAAACACTCCTTTTCAGACCACCG..............................................................................................................................................................24200.051100000
.....................................................AATCACCAGCTGGAGAGTCCT.........................................................................................................................................................................................21200.051100000
..................................................TGCAATCACCAGCTGGAGAGTCCTAG.......................................................................................................................................................................................26200.051001000
...............................................................TGGAGAGTCCTAGACAAACACTCCTT..........................................................................................................................................................................26200.051100000
.........................................................................TAGACAAACACTCCTTTTCAGACCACCG..............................................................................................................................................................28200.051100000
....................CATTACATTATTCTCGCACTCCCTGGC....................................................................................................................................................................................................................27200.051100000
...................................................................................CTCCTTTTCAGACCACCGCTA...........................................................................................................................................................21200.051100000
...........................................................................GACAAACACTCCTTTTCAGACCACC...............................................................................................................................................................25200.051100000
.................................................................................CACTCCTTTTCAGACCACCG..............................................................................................................................................................20200.051000001
..................................................TGCAATCACCAGCTGGAGAGTCCTAGA......................................................................................................................................................................................27200.051100000
.................TGACATTACATTATTCTCGCACT...........................................................................................................................................................................................................................23200.051100000
..........................................................................AGACAAACACTCCTTTTCAGACCACCGC.............................................................................................................................................................28200.051100000
droBip1
ACAGAAGAGAAGTAC-TTGACGTCACTCTTTACTCTGAATAACTAGCAGACAGGATTGTTAGATGGGGAGTCCTAGAGAAACACTCATTCTCAGACCACCGATACATAGAATTAGTGGTCAACTTCGA-----------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
CCTCCTCAAACGTGC-TAGATCTTACTCTTGTAAGG--GGACAAGGTACTTT-GGTATCAGAATGGAGAGTCCTTGAGAGACCATCCTTCTCAGATCATAAGTACATACGGTTCCAATACGCATTCGAACACTCTCCAAAAAAATCAGTCTTCAGGAA-----------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CCTTGTCTAACCTGC-TTGACCTAACAGTTGTAACG--GGACGGAG-ACTCT-GGTAGCTGGATGGAAAGTTCTTAAAAGAACATCCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TCTTGTCAAACTTAC-TAGACCTAACACTCGTAGCG--GGACAAAATACTCT-GGTATCTGGATGGCGAGTCCTCGA----TTCTTCTTCTTAAATCATAAGTATATTCTGTTCAACTTTGACTTCAAACACTCTTCAAGGCTAGCAATCTACAGGGA-----------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
ACGTGCCAAACGATCATAGATCTAACCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
CCTCGTCAAACGTGC-TAGATATAACCCTTGAAAGG--GGGCAGAGTACTTT-GGTCTTAAAATGGAGAGAACAAAATACACCACCCTTTTTAGACCATAGGTATATTCAGTTCAGGGACGAATTTAAAAGTATTCCAAAGGTAATTGTCTATAAAAA-----------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
CCTCGTCAAACGAGC-TAGATATAACACTTGTAAAG--GGACAGAGTACTTT-GGTCTCCGAATGGAGGGTCCTAAAAACACCATCTTTCTCGGACCATAGGTATATTCAGTTTAGATATGATTTTAAAAGCACTCCGAAGGTAGCTGTCTATAGAAA-----------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droYak3
CCTCCTCGAACGTGC-TAGACCTAACACTCGAAAGG--GGACAAAGTACTAT-GGTTTCAGAATGGAAAGTCCTTGAGAGACCATCTTTCTCAGATTATAAGTACATGCAATTCCTATGCGAATTCGAACACTCTCCCAAAATAACCACTTTCAGAAA-----------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..TCCTCGAACGTGC-TAGACCTAACACT......................................................................................................................................................................................................................................26110.27302100000000

Generated: 06/08/2015 at 04:31 PM