ID:

dpe_1669

 Coordinate:

scaffold_42:558978-559175 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

intron [Dper\GL18185-in]; CDS [Dper\GL18185-cds]; exon [dper_GLEANR_20125:4]; exon [dper_GLEANR_20125:5]; CDS [Dper\GL18185-cds]; intron [Dper\GL18185-in]

Repeatable elements

NameClassFamilyStrand
BEL-1_DWil-I-intLTRPao-

Sense Strand Reads

-----#############################################------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CACAGAAACAGTCAACGGAACAGATCGCCCTCAAGAAGGTTGACCGCAAGGTATGGAAGGCTAGGCTAGGTTGTTTTTAGTCTAAGTTAAGGCTCCTTAAGATCTACATATGCATGTACATAAATACATAGATACATAGATATGTATATAGAAAAAAATATTAATATTCTTTAATATATGTTCTATATCTTCTATATTATATGCTATATGTATGTATACGTTACTTGTTTAATGTTGATGTTGATCAGGCAAGTGTTGTATCCATCAAGGATGAGACTACGTCTGAGGTACGTCGACA
**************************************************((((((((((.(((((((((.....)))))))))..(((((....)))))....(((((((..(((((..((......))..)))))..)))))))(((((((....(((((((......)))))))...)))))))))))))))))(((((((.....))))))).((((((......))))))((((....)))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V111
male body		 V042
embryo
 V057
head
......................GATCGCCCTCAAGAAGGTT................................................................................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0
............CAACGGAACAGATCGCCCT........................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0
...............CGGATCAGATCGCGCTCAA........................................................................................................................................................................................................................................................................ 19 2 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................................................................................................GACTACGTCTGAGGTACGT..... 19 0 1 1.00 1 0 0 0 1 0
.AAAGAAACAGTCAACGGAA...................................................................................................................................................................................................................................................................................... 19 1 1 1.00 1 1 0 0 0 0
.......ACAGTCAACGGAACAGATCGCCCTC.......................................................................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0
...................ACAGATCGCCCTCAAGAAGGTT................................................................................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 1 0
..........GTCAACGGAACAGATCGCCCTC.......................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
.............AACGGAACAGATCGCCCTCAAGAAGGTT................................................................................................................................................................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0
.........................................................................................................................................................................................................................................GTTGATGTTGATCAGGCAAGTG........................................... 22 0 1 1.00 1 0 0 1 0 0
..........................................................................................................................................................................................................................................................................ATGGATGAGACTATGTCAGAG........... 21 3 2 0.50 1 0 1 0 0 0
....................................................................................................................................................................................................................................................TAAGGCAAGCGGTGTATCC................................... 19 3 11 0.09 1 0 0 0 0 1
.............................................................................................................................................................................................................................TACTGTTTGAATGTTGATGT......................................................... 20 3 20 0.05 1 0 0 1 0 0

Anti-sense strand reads

GTGTCTTTGTCAGTTGCCTTGTCTAGCGGGAGTTCTTCCAACTGGCGTTCCATACCTTCCGATCCGATCCAACAAAAATCAGATTCAATTCCGAGGAATTCTAGATGTATACGTACATGTATTTATGTATCTATGTATCTATACATATATCTTTTTTTATAATTATAAGAAATTATATACAAGATATAGAAGATATAATATACGATATACATACATATGCAATGAACAAATTACAACTACAACTAGTCCGTTCACAACATAGGTAGTTCCTACTCTGATGCAGACTCCATGCAGCTGT
**************************************************((((((((((.(((((((((.....)))))))))..(((((....)))))....(((((((..(((((..((......))..)))))..)))))))(((((((....(((((((......)))))))...)))))))))))))))))(((((((.....))))))).((((((......))))))((((....)))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total V057
head
.............................................................................................................TACGTCCATCTATTGATGTAT........................................................................................................................................................................ 21 3 10 0.10 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_42:558928-559225 + dpe_1669 CACAGAAACAGTCAACGGAACAGATCGCCCTCAAGAAGGTTGACCGCAAGGTATG---------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAGGCTAGGCTAG-----------GTTGTTTTTAGTCTAAGTTAAGGCTCCTTAAGATCTACATATGCATGTACATAAAT-------------------------------------------------------------------------------------ACA--TAGATA-----------------------CATAGATATGTATATAGAA---------------------------------------------------------------------------AA-------------------AAA--------------------------------TATTAATATTCTTTAATATATGTTCTATATCTTCTATATTATATGCTATATG--T----ATGT-ATACGTTAC--TTGTT--------------------------------TAATGTTGA-----------TGTTG-ATCAGGCAAGTGTTGTATCCATCAAGGATGAGACTACGTCTGAGGTACGTCGACA
dp5 XL_group1a:368604-368682 - GATA----------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATATATATATATGTATAT-------------------------------------------------------------------------------------ATA--TATATA-----------------------TATATATATATATATATAT---------------------------------------------------------------------------AT-------------------AAA--------------------------------TATAAATA----------------------------------------------------------TA------------------------------------------------------------------------------------------------------------------TTTAAATATAT
droWil2 scf2_1100000004943:1675488-1675746 + TACAGAAAGAGGTCACAGAACAGATTGCTCTCAAGAAAGTCGATCGCAAGGTAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACTGACTCTAATCTACTTATTTATTAATTGCAAGTTTTCTTGGCGA-----------AGGCGC-GAATC----TGCCGGAATCTGAATTCCC-----------AA------------------------------------------------------------------------------------------------------------------------------------------------------AAGTTTAGCACCACTCAATTCCGTATTTCCTTCGT--AT---------------------------------ACATGTTAAATG-------------TTCATTTC--TTGTC-------------------------------------CTTTTGTCCATCTG-TGTTACATCAGGCCAGTATTTCGTCTGTCAAAGAGGAGT------------CTCGTCGCAG
droVir3 scaffold_13042:2852839-2853007 - ATA-----------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATATGCATGTATATATAC-------------------------------------------------------------------------------------ATA--TATATA-----------------------TATATATATGTATATAGGTATAAATGTATTCTCGTAA-GCATATAATTTATCATACTGCAGAATGTCTTGTAT----------------------------------------------------------------------------------ATA----TTTA------------------------------TATATA--T----ATAT-ATATATAG---ATAAT-------------------T------------AATAATTGA-----------TTTAA-AGCATATAAG-------------------------------------TAGTATAT
droMoj3 scaffold_6498:552413-552784 + TATAGCAGGGAGCTGCCGAGCATATTGGTTTGAAGAAAGTGGAGCGTAAGGTGAGATGATAAGA-------------------------------TAACAAATTTTATATTAATTTGTTTAAGTCGAACTAAGAGCAATTGGCCACTTTACTTGCTTTTGAACGAGTTACACATATTTATTTTTGTTAATTTGTTTTTTATTGGGGTATATTTCACTCAGGAGTGCCAGGCTCTCAATCTTGTTATTTGTTTTTAGCTTAAGCTC-------------------TATACTTTAGGGTAAAC-------------------------------------------------------------------------------------AC---------------------------------------------------------------------------------------------------TTATCGG--------------------------------------------------------------------------------------------------------------------------CCTACTTATATTTACCTTAATA------TGTCGTATGCCATTGTGTTGCTGATC------------AT------T-----------TTTTGAATTAGGCCAGTGTTGAATCTATTAACGAAGAATCGAAGTCTGAGGTACGCCGTAA
droGri2 scaffold_14906:13004401-13004559 - GTA-----------------------------------------------------------CAGGTTGATGCTCCCTTGAGGGAAAATGTACAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATAAATATGTATATATATATAT-------------------------------------------------------------------------------------ATA--TATATA-----------------------TATATATATATAT---------------------------------------------------------------------------------ATATATA---------------------------------------------------TATATATTATATATTAT--ATATTATATATTATATATTAT-------------------------------ATATTAT---------------TTATTATTTTATATATTA----------------------------------------------------------------------CAT----ATT
droAna3 scaffold_13117:3572613-3572716 + TATA----------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATATGTACATATATATAT-------------------------------------------------------------------------------------ATA--TATATA-----------------------TATATATATATATATACGT---------------------------------------------------------------------------ATATGTA---------------------------------------------------TATATA----TTAATATATA-TATG----------------------------------------------------------------------------------------------------------------------------------------------CCTCTTATATATCACACGCTGTGT
droBip1 scf7180000396615:15526-15590 - ATA-----------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATATACATATACATAAAC-------------------------------------------------------------------------------------ATA--TATATA-----------------------CATAAATATATATATATAA---------------------------------------------------------------------------TA-------------------AAA--------------------------------AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATA
droKik1 scf7180000301930:43668-43756 - ATA-----------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTATACATATATATATAT-------------------------------------------------------------------------------------ATA--TATATA-----------------------TATATATATGTGTA---ATATAA-----------------------------------------------------------------------TA--------------------------------------------------------------------------------------------ATATTTTTATAATATA-----TATTATATATTTG--------------------------------------------------------------------------------------------------------------------TATAT
droFic1 scf7180000454040:348492-348584 + TATA----------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATA------TTAGT-TAATATTAC--ATGTT-------------------------------------TTGT-----------TGTTA-CTTAGGCAAGTATTGTGTCTGTTAAAGAAGAAGTCTC---AGAGACACGCCGTCA
droEle1 scf7180000489988:810-945 - ATA-----------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATATATATATATATATAT-------------------------------------------------------------------------------------ATA--TATATA-----------------------TATATATATATATATATAT---------------------------------------------------------------------------ATATATA---------------------------------------------------TATATATTATATATTAT--ATTATATATATTATATATTAT-------------------------------ATATTATATATTATTATATTAT------------ATATTATA---------------------------------------------------------------------TATTAGTAT
droRho1 scf7180000777286:42340-42457 - ATTA----------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGT-AATTTGTATAAATAT-------------------------------------------------------------------------------------GT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTATATG----TGAGTAAAATGTTAT--AT-TT-------------------------------------TTGC-----------TGATG-CTCAGCCAAGTATTGTGTCTATCAAGGAGGAAAAATCATCAGAGGTACGCCGCAA
droBia1 scf7180000301495:672824-672916 + ATA-----------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGTGTTATATGAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAT--TTGTT-------------------------------------TTAA-----------TGTTG-CCCAGGCAAGTATTGTGTCTGTCGAAGAAGAGATCTCGGCAGAAGTACGACGCCA
droTak1 scf7180000415288:86980-87069 + TATA----------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGTTTAATGTTAC--CTGTT-------------------------------------TTGT-----------TGTTG-CTTAGGCCAGTATTGTGTCTGTCAAAGAGGAGACCTCAACAGAGGTACGCCGCCA
droEug1 scf7180000408984:442936-443048 - TAT-----------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC------------------------------------------------------------TTGTATGA-ATATGTTATACATGGATTT-------TATTT----ATGTT-------------------------------------ACCT---------GTTATTG-TTCAGGGAAGTATTGTGTCTGAAAAAGAAGAGATCTCATCAGAGGTACGGCGCCA
dm3 chr4:754803-754954 + AAA-----------------------------------------------------------A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAATTATTGTTTTT-------------------------------------------------------------------------------------GTG--TGTTCT-----------------------TTAA------------------------------------------------------------------------------------------------------------------AGC------------------------------------------------------------TTTTATGACATTCCTTTTACATATACGTAATTTTATAGTTGT--ATGTT-------------------------------------TTGT-----------TGTTGGGTTAGGCAAGTATTGTGTCCGTTAAAGAGGAGATCTCGTCTGACGTTCGTCGCAA
droSim2 4:568013-568153 + AAA-----------------------------------------------------------C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAATGTATATTTTT-------------------------------------------------------------------------------------GT------------------------------------------------------------------------------------------------------------------------------------------------------AGC------------------------------------------------------------TTTTACGACATTTATTCTACATGTACGTAATTTTATAGTTGT--ATGTT-------------------------------------TTCT-----------TGTTGGGTTAGGCAAGTATTGTGTCCGTTAAAGAGGAGATCTCTTCTGACGTTCGTCGCAA
droSec2 scaffold_30:471609-471749 + AAA-----------------------------------------------------------C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAATGTATATTTTT-------------------------------------------------------------------------------------GT------------------------------------------------------------------------------------------------------------------------------------------------------AGC------------------------------------------------------------TTTTATGACATTTATTCTACATGTACGTAATTTTATAGTTGT--ATGTT-------------------------------------TTCT-----------TGTTGCGTTAGGCAAGTATTGTGTCCGTTAAAGAGGAGATCTCTTCTGACGTTCGCCGCAA
droYak3 4:818460-818841 + CACAGCAAAAAGCAACGGAACAAATTGACCTCAAAAAAGTTGATCGAAAGGTAAGAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATTTTAGAGATGTATTAAAAAAGGA-CAAAATATTATTGTCGTAAATTATAT----TGTATAAGTAC--ATTTACACAATACACAACACAAACAGATCAATCGTAAATTAGCATTCGGGACTAGCATTACTGTCTTGACTCCTTTGGTTTCTCATTCATCGTTATCCCTTGTGAGCATATGGATATTTATGTCCTATATACATATGTATTACTCAA---AGC------------------------------------------------------------TTGTATGCAAGTTTTATTATTTA-----AAGTTTACAGTTGTGCATTTT-------------------------------------TTGT-----------TGTTGGGTTAGGCAAGTATTGTGTCTGTCAAAGAGGAGGTCTCGTCTGATGTGAGCCGCAA
droEre2 scaffold_4512:507634-507708 - GT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGT--GTGTT-------------------------------------TTGT-----------TGTTTGGTTAGGCAAGTATTGTGTCTGTCAAAGAGGAGGTCTCGTCTGACGTACGGCGGAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
CACAGAAACAGTCAACGGAACAGATCGCCCTCAAGAAGGTTGACCGCAAGGTATG---------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAGGCTAGGCTAG-----------GTTGTTTTTAGTCTAAGTTAAGGCTCCTTAAGATCTACATATGCATGTACATAAAT-------------------------------------------------------------------------------------ACA--TAGATA-----------------------CATAGATATGTATATAGAA---------------------------------------------------------------------------AA-------------------AAA--------------------------------TATTAATATTCTTTAATATATGTTCTATATCTTCTATATTATATGCTATATG--T----ATGT-ATACGTTAC--TTGTT--------------------------------TAATGTTGA-----------TGTTG-ATCAGGCAAGTGTTGTATCCATCAAGGATGAGACTACGTCTGAGGTACGTCGACASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................GATCGCCCTCAAGAAGGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
............CAACGGAACAGATCGCCCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTACGTCTGAGGTACGT.....1911.001001000
.......ACAGTCAACGGAACAGATCGCCCTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
...................ACAGATCGCCCTCAAGAAGGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000
..........GTCAACGGAACAGATCGCCCTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.............AACGGAACAGATCGCCCTCAAGAAGGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGA-----------TGTTG-ATCAGGCAAGTG...........................................2211.001000001
dp5
GATA----------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATATATATATATGTATAT-------------------------------------------------------------------------------------ATA--TATATA-----------------------TATATATATATATATATAT---------------------------------------------------------------------------AT-------------------AAA--------------------------------TATAAATA----------------------------------------------------------TA------------------------------------------------------------------------------------------------------------------TTTAAATATATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droWil2
TACAGAAAGAGGTCACAGAACAGATTGCTCTCAAGAAAGTCGATCGCAAGGTAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACTGACTCTAATCTACTTATTTATTAATTGCAAGTTTTCTTGGCGA-----------AGGCGC-GAATC----TGCCGGAATCTGAATTCCC-----------AA------------------------------------------------------------------------------------------------------------------------------------------------------AAGTTTAGCACCACTCAATTCCGTATTTCCTTCGT--AT---------------------------------ACATGTTAAATG-------------TTCATTTC--TTGTC-------------------------------------CTTTTGTCCATCTG-TGTTACATCAGGCCAGTATTTCGTCTGTCAAAGAGGAGT------------CTCGTCGCAGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....GAAAGAGGTCACAGAACAGATTGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.00320100
........................TTGCTCTCAAGAAAGTCGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00220000
...AGAAAGAGGTCACAGAACAGATTGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00210100
...........GTCACAGAACAGATTGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200020
..................AACAGATTGCTCTCAAGAAAGTCGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00210010
.................GAACAGATTGCTCTCAAGAAAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
.....................AGATTGCTCTCAAGAAAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
................................AAGAAAGTCGATCGCAAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
......AAGAGGTCACAGAACAGATTGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000
................AGAACAGATTGCTCTCAAGAAAGTCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
.......AGAGGTCACAGAACAGATTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000
....GAAAGAGGTCACAGAACAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
..............ACAGAACAGATTGCTCTCAAGAAAGTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
....................CAGATTGCTCTCAAGAAAGTCGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
.............CACAGAACAGATTGCTCTCAAGAAAGTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100
..........................GCTCTCAAGAAAGTCGATCGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAGTATTTCGTCTGTCAAAGAGGA........................2611.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGTCAAAGAGGAGT------------CT........1911.00100010
.....................AGATTGCTCTCAAGAAAGTCGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000
.......AGAGGTCACAGAACAGATT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
...........GTCACAGAACAGATTGCTCTCAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
....GAAAGAGGTCACAGAACAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
...AGAAAGAGGTCACAGAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCGTCTGTCAAAGAGGA........................2011.00100010
...............................CAAGAAAGTCGATCGCAAGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000
.................................AGAAAGTCGATCGCAAGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.50110000
...................................AAAGTCGATCGCAAGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1850.20110000
droVir3
ATA-----------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATATGCATGTATATATAC-------------------------------------------------------------------------------------ATA--TATATA-----------------------TATATATATGTATATAGGTATAAATGTATTCTCGTAA-GCATATAATTTATCATACTGCAGAATGTCTTGTAT----------------------------------------------------------------------------------ATA----TTTA------------------------------TATATA--T----ATAT-ATATATAG---ATAAT-------------------T------------AATAATTGA-----------TTTAA-AGCATATAAG-------------------------------------TAGTATATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
TATAGCAGGGAGCTGCCGAGCATATTGGTTTGAAGAAAGTGGAGCGTAAGGTGAGATGATAAGA-------------------------------TAACAAATTTTATATTAATTTGTTTAAGTCGAACTAAGAGCAATTGGCCACTTTACTTGCTTTTGAACGAGTTACACATATTTATTTTTGTTAATTTGTTTTTTATTGGGGTATATTTCACTCAGGAGTGCCAGGCTCTCAATCTTGTTATTTGTTTTTAGCTTAAGCTC-------------------TATACTTTAGGGTAAAC-------------------------------------------------------------------------------------AC---------------------------------------------------------------------------------------------------TTATCGG--------------------------------------------------------------------------------------------------------------------------CCTACTTATATTTACCTTAATA------TGTCGTATGCCATTGTGTTGCTGATC------------AT------T-----------TTTTGAATTAGGCCAGTGTTGAATCTATTAACGAAGAATCGAAGTCTGAGGTACGCCGTAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................TTGAAGAAAGTGGAGCGTAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...........................GTTTGAAGAAAGTGGAGCGTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATCGAAGTCTGAGGTA........1911.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAATCGAAGTCTGAGGT.........2011.001001000
.....................ATATTGGTTTGAAGAAAGTGGAGCGTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
.........................TGGTTTGAAGAAAGTGGAGCGTAAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.................GAGCATATTGGTTTGAAGAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.............................TTGAAGAAAGTGGAGCGTAAGGCTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAGTCTGAGGTACGCCGT..2011.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAACGAAGAATCGAAGT................1911.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATCGAAGTCTGAGGTACGCC....2311.001001000
.....................ATATTGGTTTGAAGAAAGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
.....................ATATTGGTTTGAAGAAAGTGGAGCGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
......AGGGAGCTGCCGAGCATATTGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
...............................GAAGAAAGTGGAGCGTAAGGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
....................................................................................................................GTTTAAGTCGAACTAAGAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
droGri2
GTA-----------------------------------------------------------CAGGTTGATGCTCCCTTGAGGGAAAATGTACAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATAAATATGTATATATATATAT-------------------------------------------------------------------------------------ATA--TATATA-----------------------TATATATATATAT---------------------------------------------------------------------------------ATATATA---------------------------------------------------TATATATTATATATTAT--ATATTATATATTATATATTAT-------------------------------ATATTAT---------------TTATTATTTTATATATTA----------------------------------------------------------------------CAT----ATTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
TATA----------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATATGTACATATATATAT-------------------------------------------------------------------------------------ATA--TATATA-----------------------TATATATATATATATACGT---------------------------------------------------------------------------ATATGTA---------------------------------------------------TATATA----TTAATATATA-TATG----------------------------------------------------------------------------------------------------------------------------------------------CCTCTTATATATCACACGCTGTGTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
ATA-----------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATATACATATACATAAAC-------------------------------------------------------------------------------------ATA--TATATA-----------------------CATAAATATATATATATAA---------------------------------------------------------------------------TA-------------------AAA--------------------------------AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATASizeHit CountTotal NormTotal
No Reads
droKik1
ATA-----------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTATACATATATATATAT-------------------------------------------------------------------------------------ATA--TATATA-----------------------TATATATATGTGTA---ATATAA-----------------------------------------------------------------------TA--------------------------------------------------------------------------------------------ATATTTTTATAATATA-----TATTATATATTTG--------------------------------------------------------------------------------------------------------------------TATATSizeHit CountTotal NormTotal
No Reads
droFic1
TATA----------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATA------TTAGT-TAATATTAC--ATGTT-------------------------------------TTGT-----------TGTTA-CTTAGGCAAGTATTGTGTCTGTTAAAGAAGAAGTCTC---AGAGACACGCCGTCASizeHit CountTotal NormTotal
No Reads
droEle1
ATA-----------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATATATATATATATATAT-------------------------------------------------------------------------------------ATA--TATATA-----------------------TATATATATATATATATAT---------------------------------------------------------------------------ATATATA---------------------------------------------------TATATATTATATATTAT--ATTATATATATTATATATTAT-------------------------------ATATTATATATTATTATATTAT------------ATATTATA---------------------------------------------------------------------TATTAGTATSizeHit CountTotal NormTotal
No Reads
droRho1
ATTA----------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGT-AATTTGTATAAATAT-------------------------------------------------------------------------------------GT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTATATG----TGAGTAAAATGTTAT--AT-TT-------------------------------------TTGC-----------TGATG-CTCAGCCAAGTATTGTGTCTATCAAGGAGGAAAAATCATCAGAGGTACGCCGCAASizeHit CountTotal NormTotal
No Reads
droBia1
ATA-----------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGTGTTATATGAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAT--TTGTT-------------------------------------TTAA-----------TGTTG-CCCAGGCAAGTATTGTGTCTGTCGAAGAAGAGATCTCGGCAGAAGTACGACGCCASizeHit CountTotal NormTotal
No Reads
droTak1
TATA----------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGTTTAATGTTAC--CTGTT-------------------------------------TTGT-----------TGTTG-CTTAGGCCAGTATTGTGTCTGTCAAAGAGGAGACCTCAACAGAGGTACGCCGCCASizeHit CountTotal NormTotal
No Reads
droEug1
TAT-----------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC------------------------------------------------------------TTGTATGA-ATATGTTATACATGGATTT-------TATTT----ATGTT-------------------------------------ACCT---------GTTATTG-TTCAGGGAAGTATTGTGTCTGAAAAAGAAGAGATCTCATCAGAGGTACGGCGCCASizeHit CountTotal NormTotal
No Reads
dm3
AAA-----------------------------------------------------------A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAATTATTGTTTTT-------------------------------------------------------------------------------------GTG--TGTTCT-----------------------TTAA------------------------------------------------------------------------------------------------------------------AGC------------------------------------------------------------TTTTATGACATTCCTTTTACATATACGTAATTTTATAGTTGT--ATGTT-------------------------------------TTGT-----------TGTTGGGTTAGGCAAGTATTGTGTCCGTTAAAGAGGAGATCTCGTCTGACGTTCGTCGCAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTT-------------------------------------TTGT-----------TGTTGGGTTAG..................................................1819.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000900000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT--ATGTT-------------------------------------TTGT-----------TGTTGGGTTAG..................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTT-------------------------------------TTGT-----------TGTTGGGTTAG..................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGGTTAGGCAAGTATTGTGTCC...................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTCGTCTGACGTTCGT.....1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGT-----------TGTTGGGTTAGGCAAGTATTGTG......................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--ATGTT-------------------------------------TTGT-----------TGTTGGGTTAG..................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGT--ATGTT-------------------------------------TTGT-----------TGTTGGG......................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTGTGTCCGTTAAAGAGG.........................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCGTCTGACGTTCGTCGC..2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATCTCGTCTGACGTTCGTCGCAA2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTT-------------------------------------TTGT-----------TGTTGGGTTAGGCAAG.............................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGATCTCGTCTGACGTTCG......2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGTGTCCGTTAAAGAGGAGATC....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTAATTTTATAGTTGT--ATG...................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGTGTCCGTTAAAGAGGAGA......................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTT-------------------------------------TTGT-----------TGTTGGGTTAT..................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGT-----------TGTTGGGTTAGGCAAGTATTGT.......................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAAGAGGAGATCTCGTCT..............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAAGAGGAGATCTCGTCTGACGTT........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGT--ATGTT-------------------------------------TTGT-----------TGTTGGGTTAG..................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTTGT--ATGTT-------------------------------------TTGT-----------TGTTGGG......................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGT--ATGTT-------------------------------------TTGT-----------TGTTGGGT.....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGTAATTTTATAGTTGT--ATG...................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAGAGGAGATCTCGTCTGACGTTC.......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATCTCGTCTGACGTTC.......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTGTGTCCGTTAAAGA...........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGGGTTAGGCAAGTATTG........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTTAAAGAGGAGATCTCGTC...............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGACATTCCTTTTACATATACGT......................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAAGTATTGTGTCCGTTA...............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGTTAAAGAGGAC.......................1620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATCTCGTCTGACGTTATC.....2040.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AAA-----------------------------------------------------------C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAATGTATATTTTT-------------------------------------------------------------------------------------GT------------------------------------------------------------------------------------------------------------------------------------------------------AGC------------------------------------------------------------TTTTACGACATTTATTCTACATGTACGTAATTTTATAGTTGT--ATGTT-------------------------------------TTCT-----------TGTTGGGTTAGGCAAGTATTGTGTCCGTTAAAGAGGAGATCTCTTCTGACGTTCGTCGCAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTCTTCTGACGTTCGTC....2011.00100100000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCTTCTGACGTTCGT.....1811.00100100000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTTCTGACGTTCGTCGC..1911.00100100000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTTCTGACGTTCGTCGC..2011.00100100000000000000
droSec2
AAA-----------------------------------------------------------C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAAATGTATATTTTT-------------------------------------------------------------------------------------GT------------------------------------------------------------------------------------------------------------------------------------------------------AGC------------------------------------------------------------TTTTATGACATTTATTCTACATGTACGTAATTTTATAGTTGT--ATGTT-------------------------------------TTCT-----------TGTTGCGTTAGGCAAGTATTGTGTCCGTTAAAGAGGAGATCTCTTCTGACGTTCGCCGCAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTTAAAGAGGAGATCTCT.................2011.0010100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTT-------------------------------------TTCT-----------TGTTGCGTTAG..................................................1811.0010010
droYak3
CACAGCAAAAAGCAACGGAACAAATTGACCTCAAAAAAGTTGATCGAAAGGTAAGAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATTTTAGAGATGTATTAAAAAAGGA-CAAAATATTATTGTCGTAAATTATAT----TGTATAAGTAC--ATTTACACAATACACAACACAAACAGATCAATCGTAAATTAGCATTCGGGACTAGCATTACTGTCTTGACTCCTTTGGTTTCTCATTCATCGTTATCCCTTGTGAGCATATGGATATTTATGTCCTATATACATATGTATTACTCAA---AGC------------------------------------------------------------TTGTATGCAAGTTTTATTATTTA-----AAGTTTACAGTTGTGCATTTT-------------------------------------TTGT-----------TGTTGGGTTAGGCAAGTATTGTGTCTGTCAAAGAGGAGGTCTCGTCTGATGTGAGCCGCAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGTCTGATGTGAGCCGC..1911.00100100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAGAGGAGGTCTCGTCTGAT...........2411.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGGAGGTCTCGTCTGA............1911.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTGTCTGTCAAAGAGGAGGT.....................2311.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGGTCTCGTCTGATG..........1811.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTATTGTGTCTGTCAAAGAGGA........................2411.00100000010000
.......AAAAGCAACGGAACAAATT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................ACACAACACAAACAGATCAATCGTAA..................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
..........................GACCTCAAAAAAGTTGATCGAAAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTGTCTGTCAAAGAGGAG.......................2111.00100000010000
.............AACGGAACAAATTGACCTCAAAAAAGTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTGTGTCTGTCAAAGAGGAGGT.....................2511.00100000010000
droEre2
GT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGT--GTGTT-------------------------------------TTGT-----------TGTTTGGTTAGGCAAGTATTGTGTCTGTCAAAGAGGAGGTCTCGTCTGACGTACGGCGGAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTATTGTGTCTGTCAAAGA...........................2111.0010001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTGTCTGTCAAAGAGGAGGTCTC..................2611.0010100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGTCAAAGAGGAGGT.....................1811.0010000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGAGGAGGTCTCGTCTGAC...........2211.0011000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCTCGTCTGACGTACGGCGGA.2311.0010100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT--GTGTT-------------------------------------TTGT-----------TGTTTGGTTAG..................................................2211.0010000100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGTCAAAGAGGAGGTCT...................2011.0010000010

Generated: 06/08/2015 at 04:30 PM