ID:

dpe_1660

 Coordinate:

scaffold_42:174648-174798 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.6 -13.4 -13.3

Flybase annnotation

CDS [Dper\GL18169-cds]; exon [dper_GLEANR_20109:4]; intron [Dper\GL18169-in]

No Repeatable elements found

mature
  1. dpe_1660  scaffold_42:174766-174786 +
  2. scaffold_42:411859-411879 -
  3. scaffold_158:28707-28727 -
  4. scaffold_1047:5416-5436 +
  5. scaffold_179:23010-23030 -
  6. scaffold_18:286317-286337 +
  7. scaffold_18:328327-328347 -
  8. scaffold_456:4790-4810 -
  9. scaffold_0:4695886-4695906 -
  10. scaffold_0:8721762-8721782 -
  11. dpe_2439  scaffold_2:2363652-2363672 +
  12. dpe_2351  scaffold_85:100258-100278 +
  13. scaffold_12:2213221-2213241 +
  14. dpe_2263  scaffold_64:265675-265695 -
  15. scaffold_17:1820431-1820451 -
  16. dpe_2266  scaffold_26:1303816-1303836 -
  17. dpe_2409  scaffold_46:570763-570783 -
  18. scaffold_109:94696-94716 +
  19. dpe_2395  scaffold_1401:6001-6021 -
  20. scaffold_6129:1368-1388 -
star
  1. dpe_1660  scaffold_42:174701-174722 +
  2. scaffold_456:4854-4875 -
  3. dpe_2409  scaffold_46:570827-570848 -
  4. scaffold_109:94631-94652 +
  5. dpe_2395  scaffold_1401:6065-6086 -

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AACGGAGCGCGAATGGAAATGTACAAATACGCTTGCGGTCCTGGATTTGGGTACGTACATATAGTGTTTTTATATCATTACTAGACCTCGGATTTTGCATATTTTATTCATCAGCATAGTCGTGGGCTCATTATTAATTTTTGTTCAATTGATTTCCTTTGACTATATTTGAAAAGCACTTGGCTGGGGGATCGGAGGATCGGAGGTGCTGCGAGTACGAGTCATCAGAATTTTTCTATCTTAATCCTTTA
*******************************************************************************************************.......((((((((((((.(((......(((((((.......)))))))..))).)))))))................)))))..************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V042
embryo
 V057
head
........................................................................................................................................................................TTGAAAAGCACTTGGCTGGGG.............................................................. 21 0 20 0.25 5 5 0 0 0
.......................................................................................................TTATTCATCAGCATAGTCGTGG.............................................................................................................................. 22 0 5 0.20 1 1 0 0 0
.......................................................................................................................................................................TTTGAAAAGCACTTGGCTGGGGG............................................................. 23 0 20 0.15 3 1 2 0 0
................................................................................................................................................TCAATTGATTTCCTTTGACTATAT................................................................................... 24 0 20 0.15 3 3 0 0 0
...................................................................................................................................................................................TTGGCTGGGGGATCGGAGGATAAA................................................ 24 3 19 0.11 2 0 2 0 0
.........................................................................................................................................................................TGAAAAGCACTTGGCTGGGGGATC.......................................................... 24 0 20 0.10 2 2 0 0 0
.........................................................................................................................................................................TGAAAAGCACTTGGCTGGGGG............................................................. 21 0 20 0.10 2 2 0 0 0
.................................................................................................................................................CAATTGATTTCCTTTGACTATAT................................................................................... 23 0 20 0.10 2 2 0 0 0
.................................................................................................................................................CAATTGATTTCCTTTGACTATATT.................................................................................. 24 0 20 0.10 2 2 0 0 0
..............................................................................................................................................................................................................TGCTGCGAGTACGAGTCATCAGAATTT.................. 27 0 17 0.06 1 1 0 0 0
........................................................................................................................................................................................TGGGGGATCGGAGGATCGGAGGTG........................................... 24 0 18 0.06 1 1 0 0 0
...............................................................................................................................................................................................TCGGAGGATCGGAGGTGCTGCGA..................................... 23 0 19 0.05 1 1 0 0 0
..............................................................................................................................................................................................................TGCTGCGAGTACGAGTCATA......................... 20 1 19 0.05 1 1 0 0 0
................................................................................................................................................................................CACTTGGCTGGGGGATCGGAGGAT................................................... 24 0 19 0.05 1 1 0 0 0
........................................................................................................................................................................TTGAAAAGCACTTGGCTGGGGGA............................................................ 23 0 20 0.05 1 1 0 0 0
..........................................................................................................................TGGGCTCATTATTAATTTTTGTTCAAT...................................................................................................... 27 0 20 0.05 1 1 0 0 0
................................................................................................................................................TCAATTGATTTCCTTTGACTATT.................................................................................... 23 1 20 0.05 1 1 0 0 0
................................................................................................................................................TCAATTGATTTCCTTTGACT....................................................................................... 20 0 20 0.05 1 1 0 0 0
.....................................................................................................................................................................TATTTGAAAAGCACTTGGC................................................................... 19 0 20 0.05 1 1 0 0 0
.........................................................................................................................................................................TGAAAAGCGCTTGGCTGGGGGATC.......................................................... 24 1 20 0.05 1 1 0 0 0
.........................................................................................................................................................................TGAAAAGCACTTGGCTGGGG.............................................................. 20 0 20 0.05 1 1 0 0 0
................................................................................................................................................TCAATTGATTTCCTTTGACTATATT.................................................................................. 25 0 20 0.05 1 1 0 0 0
................................................................................................................................................TCAATTGATTTCCTTTGACTATATTTGA............................................................................... 28 0 20 0.05 1 1 0 0 0
.......................................................................................................................................................................TTTGAAAAGCACTTGGCTGG................................................................ 20 0 20 0.05 1 1 0 0 0
..........................................................................................................................................................................GAAAAGCACTTGGCTGGGG.............................................................. 19 0 20 0.05 1 1 0 0 0
............................................................................................................................................................................AAAGCACTGGGCTGGGGGATCGGAA...................................................... 25 2 20 0.05 1 1 0 0 0
.........................................................................................................................................................................TGAAAAGCGCTTGGCTGGGGGCTC.......................................................... 24 2 20 0.05 1 1 0 0 0
.........................................................................................................................................................................TGAAAAGCACTTGGCTGGG............................................................... 19 0 20 0.05 1 1 0 0 0
......................................................................................................................................................................................................ATGGGAGGTGCTGTGAGT................................... 18 2 20 0.05 1 0 0 0 1
........................................................................................................................................................................TTGAAAAGCACTTGGCTGGGGG............................................................. 22 0 20 0.05 1 1 0 0 0
................................................................................................................................................TCAATTGACTTCCTTTGACTATATT.................................................................................. 25 1 20 0.05 1 1 0 0 0
.........................................................................................................................................................................TGAAAAGCACTTGGCTGGT............................................................... 19 1 20 0.05 1 1 0 0 0
.............................................................................................................................................TGTTCAATTGATTTCCTTTGAC........................................................................................ 22 0 20 0.05 1 1 0 0 0
.........................................................................................................................................................................TGAAAAGCACTTGGCTGGGGT............................................................. 21 1 20 0.05 1 0 0 1 0
..........................................................................................................................................................................GAAAAGCACTTGGCTGGG............................................................... 18 0 20 0.05 1 1 0 0 0
...........................................................................................................................................TTTGTTCAATTGATTTCCTTTGA......................................................................................... 23 0 20 0.05 1 1 0 0 0
............................................................................................................................................................................AAAGCACTTGGCTGGGGGAT........................................................... 20 0 20 0.05 1 0 0 1 0
..........................................................................................................................TGGGCTGATGATTGATTTTTGT........................................................................................................... 22 3 20 0.05 1 0 0 0 1
.........................................................................................................................................................................TGAAAAGCACTTGCCTGGGGGATGGG........................................................ 26 2 20 0.05 1 1 0 0 0
........................................................................................................................................................................TTGAAAAGGACTTGGCTGGG............................................................... 20 1 20 0.05 1 1 0 0 0
.........................................................................................................................................................................TGAAAAGCACTTGGCTGGGGGATCGG........................................................ 26 0 20 0.05 1 1 0 0 0
.......................................................................................................................................................................TTTGAAAAGCACTTGGCTGGG............................................................... 21 0 20 0.05 1 0 1 0 0
...................................................................................................................................................................................TTGGCTGGGGGATCGGAGG..................................................... 19 0 20 0.05 1 1 0 0 0
.........................................................................................................................................................................TGAAAAGCACTTGGCTGGGGGAT........................................................... 23 0 20 0.05 1 1 0 0 0
.................................................................................TAGACCTCGGATTTTGCATATTT................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0
.........................................................................................................................................................................TGAAAAGCACTTGGCTGGGC.............................................................. 20 1 20 0.05 1 1 0 0 0

Anti-sense strand reads

TTGCCTCGCGCTTACCTTTACATGTTTATGCGAACGCCAGGACCTAAACCCATGCATGTATATCACAAAAATATAGTAATGATCTGGAGCCTAAAACGTATAAAATAAGTAGTCGTATCAGCACCCGAGTAATAATTAAAAACAAGTTAACTAAAGGAAACTGATATAAACTTTTCGTGAACCGACCCCCTAGCCTCCTAGCCTCCACGACGCTCATGCTCAGTAGTCTTAAAAAGATAGAATTAGGAAAT
**************************************************************.......((((((((((((.(((......(((((((.......)))))))..))).)))))))................)))))..******************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V057
head
 V042
embryo
 V111
male body
..................................................CATGTAGGTATATCACTAAAAT................................................................................................................................................................................... 22 3 4 0.25 1 0 0 1 0 0
...........................................................................................................................................................................................................................TCAGTAGTCTTAAAAAGATAGAATTAG..... 27 0 18 0.22 4 0 4 0 0 0
.............................................................................................................................................................................................CTAGCCTCCTAGCCTCCACGACGCT..................................... 25 0 18 0.11 2 2 0 0 0 0
...........................................................................................................................................................................................................................TCAGTAGTCTTAAAAAGATAGAAT........ 24 0 18 0.11 2 0 2 0 0 0
.....................................................GCATGTCTATCACGTAAAT................................................................................................................................................................................... 19 3 20 0.10 2 0 0 0 0 2
......................................................................................................................................................................................................................CATGCTCAGTAGTCTTAAAAAGATAGAAT........ 29 0 16 0.06 1 1 0 0 0 0
.............................................................................................................................................................................................CTAGCCTCCTAGCCTCCACGACGCTCAT.................................. 28 0 16 0.06 1 1 0 0 0 0
......................................................................................................................................................................................CGACCCCCTAGCCTCCTAGCCTCCA............................................ 25 0 18 0.06 1 1 0 0 0 0
...........................................................................................................................................................................................ACCTAGCCTCCTAGCCTCCAC........................................... 21 1 18 0.06 1 1 0 0 0 0
.........................................................................................................................................................................................................................GCTCAGTAGTCTTAAAAAGATAG........... 23 0 18 0.06 1 1 0 0 0 0
.........................................................................................................................................................................................................................GCTCAGTAGTCTTAAAAAGATAGAAT........ 26 0 18 0.06 1 1 0 0 0 0
............................................................................................................................................................................................CCTAGCCTCCTAGCCTCCACGACGCT..................................... 26 0 18 0.06 1 1 0 0 0 0
.............................................................................................................................................................................................CTAGCCTCCTAGCCTCCACGACGC...................................... 24 0 18 0.06 1 0 0 0 1 0
.......................................................................................................................................................................................GACCCCCTAGCCTCCTAGCCTCC............................................. 23 0 18 0.06 1 1 0 0 0 0
..................................................................................................................................................................................................................CGCTCATGCTCAGTAGTCT...................... 19 0 19 0.05 1 1 0 0 0 0
.................................................................................................................CGTATCAGCACCCGAGTAATAATT.................................................................................................................. 24 0 20 0.05 1 1 0 0 0 0
.....................................................................................................................................................................................................CTAGCCTCCACGACGCTCATGCT............................... 23 0 20 0.05 1 1 0 0 0 0
..............................................................................................................................................................................................................................GTAGTCTTAAAAAGATAGAATTAGGA... 26 0 20 0.05 1 1 0 0 0 0
...........................................................................................................................................................GGATACTGATATAAACTTTTCGTGAAC..................................................................... 27 1 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................................................................................TAGTCTTAAAAAGATAGAATTAGGA... 25 0 20 0.05 1 1 0 0 0 0
...........................................................................................................................................................................................................................CCAGTAGTCTTAAAAAGATAGAATTAG..... 27 1 20 0.05 1 0 1 0 0 0
...................................................................................................................................................................................................................................CTTAAAAAGATAGAATTAGGA... 21 0 20 0.05 1 1 0 0 0 0
....................................................................................................................................................................................................CCTAGCCTCCACGACGCTCATGCTC.............................. 25 0 20 0.05 1 1 0 0 0 0
.............................................................................................................................................ACAAGTTAACTAAAGGAAACTGATAT.................................................................................... 26 0 20 0.05 1 1 0 0 0 0
.........................................................................................................................................................................................................CCTCCACGACGCTCATGCT............................... 19 0 20 0.05 1 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_42:174598-174848 + dpe_1660 AACGGAGCGCGAATGGAAATGTACAAATACGCTTGCGGTCCTGGATTTGGGTACGTACAT-ATAGTGTTTTTATATCATTACTAG------------------ACCTCGGATTTTGCATATTTTATTCATCAGCATAGTCGTGGGCTCATTATTAA------------------------------------------------------------------------------------------------------TTTTTGTTCAATTGATTTCCTTTGACTATATTTGAAAAG-------------------------CACTTGGCTGGGGGATCGGAGGATCGGAGGTGCTGCGAGTACGAGTCATCAGAATT-------------------------------TTTCTATCT-TAATCCTTTA
dp5 Unknown_group_1:53612-53862 + dps_1737 AACGGAGCGCGAATGGAAATGTACAAATACGCTTGCGGTCCTGGATTTGGGTACGTACAT-ATAGTGTTTTTATATCATTACTAG------------------ACCTCGGATTTTGCATATTTTATTCATCAGCATAGTCGTGGGCTCATTATTAA------------------------------------------------------------------------------------------------------TTTTTGTTCAATTGATTTCCTTTGACTATATTTGAAAAG-------------------------CACTTGGCTGGGGGATCGGAGGATCGGAGGTGCTGCGAGTACGAGTCATCAGAATT-------------------------------TTTCTATCT-TAATCCTTTA
droWil2 scf2_1100000004943:1974654-1974740 - CACTGAACGCGAGTGGAAGTGTACAAATACTCTTGCTATTCTTGACTTGGGTATGATTGT-TA-AGGTTTCGATATTTCCATTCG------------------AG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT
droVir3 scaffold_12932:851240-851339 - TTTATCTTGTTGCTGGGTATT-ACGCAAAT--TTAACGTAATTCTGTTT----------------------------------------------------------------------------------------------GGCTTGTAAATAA------------------------------------------------------------------------------------------------------TATTTGTTTATTTCATTGCATTTGTTTATATTTGGAGTA----------------------------------------------------------------------------------------------------------------------------------CA
droMoj3 scaffold_6498:2411584-2411719 + ATGAAATGTTGTCCA----------ATTATT---------------------------------------------------------TTGTGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTCTAGAATTGAAAAT-------------------------GAAATGCCTATGGGA-CAGA-----------GCTTTGTA------TGTTTGGACCTCACCAAATTGCCGCAAATACTACAGCAAATTTTTGCATCTTCCATTCTCTA
droGri2 scaffold_3522:386-493 + AACAGAACGTGAATGGAAATGCTCAAATACGCTCGCCGTACTTGATTTGGGTAT-------TT------ACTATACTGTATA---TATATATATT-TATATATACATT----GTACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-------------------------------------------GTATATTATA
droAna3 scaffold_13131:48075-48169 + GTTCGTA---------AAATATAGCAACACC---------------------------------------------------------------------------TCGTGGTCTGCGTATCTCTTTTTTAAAATAAATTATGAAGTTTTTATTAA------------------------------------------------------------------------------------------------------TTTTTATTTATTATATTTATT----------------------------------------------------------------------------------------------------------------------------------------------------CT
droBip1 scf7180000393587:28712-28821 - AACAGAGAGGGAATGGAAATGCACAAATACGCTTGCTGTACTTAATCTTGGTATGTAAATGATTTTATTCCCAAATTAAT-TTAG------------------ATTTAGGATTAAAAATAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTGCA
droKik1 scf7180000302230:413149-413258 + CATACGC-------------------------------------------------------------------------------------------------------------------------------ATACGCATGGGCTCATTATTAA------------------------------------------------------------------------------------------------------TTTTTGTTCAGTTGATTTCCTTTACCCATATTTGAAGAGCTATT---------------------TCTTGGTTAGGGGGTCAAAAG---GGGGACAATTCGAG------------------------------------------------------------------TA
droFic1 scf7180000454077:1002527-1002673 + TCATCGGCATAGGCACGGGCGCATTATTA------------------------------------------------------------------------------------------------------------------------------A------------------------------------------------------------------------------------------------------TTTTTGTTCAATTGACTTCCTTTGCCTGTACTTGATCAGCTATTTCTTATTTCGACCTCCAA-------AGCGAGGGGGTCAAAGG---GGGGGCACTTTGGGTACTCGTTATTCGTACT-------------------------------CT-------------CTTGT
droEle1 scf7180000488757:9379-9572 - CACTGGTAGTT-----------------------------GTGTGTTTATTTATGTATGT-AT----------------------------------------AGATC----TTAAG-----------------------------CTATCGTTGGAGTTCAGCTATTATATTATATTATTTCAGTGTACCAATTATGTAATTCTTGTGCCG-GCTGGCTATACTTCCGTGACAGGG--------------------------------GTGAAGCCGGCTGGCTATA-------CG-------------------------TCCGTGGCTGGGGGGTCGGTAGACCGTGGTTGCCGCTAG-------------------------------------------------------------------T
droRho1 scf7180000763070:4333-4444 + GGATTAGGAAGAGTACATGTATG-------------------------------------------GCTATAGCATGAAC-TAGG------------------ACTTTTAAATTCGCACAA-----AAATTAACAAAATGGCGGACCTTTGAACAT------------------------------------------------------------------------------------------------------TTTTTGTTTAATTGCTTTCTT----------------------------------------------------------------------------------------------------------------------------------------------------TT
droBia1 scf7180000301495:164167-164246 + AACAGAGCGTGAATGGAAATGCACAAACACTCTTGCAGTACTTGACTTGGGTAAGTAAAT-AT------TTTAAATCATAAGTAT------------------A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C
droTak1 scf7180000415857:798180-798283 + ATTTTGCATATTTTA----TGCAT----------------------------------------------------------------ATGCATTTTATGCAAATATT----TTAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATATT--------------------------------------TTTATTGAA-ACGA-----------ACTTTG-----GTGTTTTCGGAATT-------------------------------GATCTATTT-TTATCCTATA
droEug1 scf7180000408984:785327-785411 - AACAGAACGGGAATGGAAATGTACAAATACTCTTGCAGTTCTGGATTTAGGTAAGTCAAT-TT------ATAAAATAGTATA---TAT---------------A--TAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT
dm3 chr4:383711-383782 + AACAGAGCGTGAATGGAAATGTACAAACACTCTTGCTGTCCTTGACCTTGGTAAGAATAT-TT------GTTATACCAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 3l:17879307-17879383 - AACAGAGCGTGAATGGAAATGTACAAACACTCTTGCTGTCCTTGACCTAGGTAAGAATAT-TT------GTTATACCATAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA
droSec2 scaffold_30:116914-116990 + AACAGAGCGTGAATGGAAATGTACAAACACTCTTGCTGTCCTTGACCTAGGTAAGAATAT-TT------GTTATACCATAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA
droYak3 4:422635-422711 + AACAGAGCGTGAATGGAAATGTACAAACACTCTTGCAGTCCTTGACTTAGGTAAATATAT-TT------GTTATACCATAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA
droEre2 scaffold_4820:9072528-9072733 + AAT------------------------CACGTTTGCAATTTCGGTTTCGGGTGTGTACAT-AT------ATAATATATTATA---T---------------AAG------------TACAT-----AATGTAATAAGTTGA--------------------------------------------------------------------CCGTGCCTAATTTAACCCCATAGAATGGTGCTTGTTAGCCCCATAGTATTTGATTTACGACTAATTTC----------------------------------GACTTACACAGCACGTGGCTGGGAGATCATTA----------------------------------------AAGTGTTCGGTAAACAAAA--------------TG-AAATTTTCGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
AACGGAGCGCGAATGGAAATGTACAAATACGCTTGCGGTCCTGGATTTGGGTACGTACAT-ATAGTGTTTTTATATCATTACTAG------------------ACCTCGGATTTTGCATATTTTATTCATCAGCATAGTCGTGGGCTCATTATTAA------------------------------------------------------------------------------------------------------TTTTTGTTCAATTGATTTCCTTTGACTATATTTGAAAAG-------------------------CACTTGGCTGGGGGATCGGAGGATCGGAGGTGCTGCGAGTACGAGTCATCAGAATT-------------------------------TTTCTATCT-TAATCCTTTASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................................................................................................................................................................................................................................................................................................TTGAAAAG-------------------------CACTTGGCTGGGG..............................................................................................21200.255050000
..........................................................................................................................TTATTCATCAGCATAGTCGTGG.............................................................................................................................................................................................................................................................................................2250.201010000
................................................................................................................................................................................................................................................................................................TTTGAAAAG-------------------------CACTTGGCTGGGGG.............................................................................................23200.153210000
.........................................................................................................................................................................................................................................................................TCAATTGATTTCCTTTGACTATAT............................................................................................................................................24200.153030000
.....................................................................................................................................................................................................................................................................................................................................TTGGCTGGGGGATCGGAGGATAAA................................................................................24190.112200000
..................................................................................................................................................................................................................................................................................................TGAAAAG-------------------------CACTTGGCTGGGGGATC..........................................................................................24200.102020000
..................................................................................................................................................................................................................................................................................................TGAAAAG-------------------------CACTTGGCTGGGGG.............................................................................................21200.102020000
..........................................................................................................................................................................................................................................................................CAATTGATTTCCTTTGACTATAT............................................................................................................................................23200.102020000
..........................................................................................................................................................................................................................................................................CAATTGATTTCCTTTGACTATATT...........................................................................................................................................24200.102020000
................................................................................................................................................................................................................................................................................................................................................................TGCTGCGAGTACGAGTCATCAGAATT-------------------------------T...................27170.061010000
..........................................................................................................................................................................................................................................................................................................................................TGGGGGATCGGAGGATCGGAGGTG...........................................................................24180.061010000
.................................................................................................................................................................................................................................................................................................................................................TCGGAGGATCGGAGGTGCTGCGA.....................................................................23190.051010000
................................................................................................................................................................................................................................................................................................................................................................TGCTGCGAGTACGAGTCATA.........................................................20190.051010000
..................................................................................................................................................................................................................................................................................................................................CACTTGGCTGGGGGATCGGAGGAT...................................................................................24190.051010000
.................................................................................................................................................................................................................................................................................................TTGAAAAG-------------------------CACTTGGCTGGGGGA............................................................................................23200.051010000
.............................................................................................................................................TGGGCTCATTATTAA------------------------------------------------------------------------------------------------------TTTTTGTTCAAT...............................................................................................................................................................27200.051010000
.........................................................................................................................................................................................................................................................................TCAATTGATTTCCTTTGACTATT.............................................................................................................................................23200.051010000
.........................................................................................................................................................................................................................................................................TCAATTGATTTCCTTTGACT................................................................................................................................................20200.051010000
..............................................................................................................................................................................................................................................................................................TATTTGAAAAG-------------------------CACTTGGC...................................................................................................19200.051010000
..................................................................................................................................................................................................................................................................................................TGAAAAG-------------------------CACTTGGCTGGGG..............................................................................................20200.051010000
.........................................................................................................................................................................................................................................................................TCAATTGATTTCCTTTGACTATATT...........................................................................................................................................25200.051010000
.........................................................................................................................................................................................................................................................................TCAATTGATTTCCTTTGACTATATTTGA........................................................................................................................................28200.051010000
................................................................................................................................................................................................................................................................................................TTTGAAAAG-------------------------CACTTGGCTGG................................................................................................20200.051010000
...................................................................................................................................................................................................................................................................................................GAAAAG-------------------------CACTTGGCTGGGG..............................................................................................19200.051010000
..................................................................................................................................................................................................................................................................................................TGAAAAG-------------------------CACTTGGCTGGG...............................................................................................19200.051010000
.................................................................................................................................................................................................................................................................................................TTGAAAAG-------------------------CACTTGGCTGGGGG.............................................................................................22200.051010000
..................................................................................................................................................................................................................................................................................................TGAAAAG-------------------------CACTTGGCTGGT...............................................................................................19200.051010000
......................................................................................................................................................................................................................................................................TGTTCAATTGATTTCCTTTGAC.................................................................................................................................................22200.051010000
..................................................................................................................................................................................................................................................................................................TGAAAAG-------------------------CACTTGGCTGGGGT.............................................................................................21200.051001000
...................................................................................................................................................................................................................................................................................................GAAAAG-------------------------CACTTGGCTGGG...............................................................................................18200.051010000
....................................................................................................................................................................................................................................................................TTTGTTCAATTGATTTCCTTTGA..................................................................................................................................................23200.051010000
.....................................................................................................................................................................................................................................................................................................AAAG-------------------------CACTTGGCTGGGGGAT...........................................................................................20200.051001000
..................................................................................................................................................................................................................................................................................................TGAAAAG-------------------------CACTTGGCTGGGGGATCGG........................................................................................26200.051010000
................................................................................................................................................................................................................................................................................................TTTGAAAAG-------------------------CACTTGGCTGGG...............................................................................................21200.051100000
.....................................................................................................................................................................................................................................................................................................................................TTGGCTGGGGGATCGGAGG.....................................................................................19200.051010000
..................................................................................................................................................................................................................................................................................................TGAAAAG-------------------------CACTTGGCTGGGGGAT...........................................................................................23200.051010000
..................................................................................TAG------------------ACCTCGGATTTTGCATATTT..................................................................................................................................................................................................................................................................................................................23200.051010000
..................................................................................................................................................................................................................................................................................................TGAAAAG-------------------------CACTTGGCTGGGC..............................................................................................20200.051010000
dp5
AACGGAGCGCGAATGGAAATGTACAAATACGCTTGCGGTCCTGGATTTGGGTACGTACAT-ATAGTGTTTTTATATCATTACTAG------------------ACCTCGGATTTTGCATATTTTATTCATCAGCATAGTCGTGGGCTCATTATTAA------------------------------------------------------------------------------------------------------TTTTTGTTCAATTGATTTCCTTTGACTATATTTGAAAAG-------------------------CACTTGGCTGGGGGATCGGAGGATCGGAGGTGCTGCGAGTACGAGTCATCAGAATT-------------------------------TTTCTATCT-TAATCCTTTASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................................................................................................................................................................................................................................................................TTTGACTATATTTGAAAAG-------------------------CACTTG.....................................................................................................25101.401401400000000
..........................ATACGCTTGCGGTCCTGGATTTGGAC.........................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
...............................CTTGCGGTCCTGGATTTGG...........................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
......................................................................................................................................................................................................................................................................................TTTGACTATATTTGAAAAG-------------------------CACTTGGC...................................................................................................27100.8080800000000
......................................................................................................................................................................................................................................................................................TTTGACTATATTTGAAAAG-------------------------CACTTGG....................................................................................................26100.6060600000000
..........................................................................................................................................................................................................................................................................................................................................TGGGGGATCGGAGGATCGGAGG.............................................................................2270.4330210000000
...............................................................................TACTAG------------------ACCTCGGATTTTGCATAT....................................................................................................................................................................................................................................................................................................................2430.3310000000010
..........................................................................................................................TTATTCATCAGCATAGTCGTGGGC...........................................................................................................................................................................................................................................................................................2460.3320200000000
..........................................................................................................................TTATTCATCAGCATAGTCGTG..............................................................................................................................................................................................................................................................................................2160.3320200000000
...........................................................................................................................TATTCATCAGCATAGTCGTGGG............................................................................................................................................................................................................................................................................................2260.3320100100000
......................................................................................................................................................................................................................................................................................TTTGACTATATTTGAAAAG-------------------------CACTT......................................................................................................24100.3030300000000
................................................................................................................................ATCAGCATAGTCGTGGGCTC.........................................................................................................................................................................................................................................................................................20100.3030210000000
......................................................................................................................................................................................................................................................................................TTTGACTATATTTGAAAAG-------------------------CAC........................................................................................................22100.3030210000000
......................................................................................................................................................................................................................................................................................TTTGACTATATTTGAAAAG-------------------------CACT.......................................................................................................23100.3030120000000
.....................................................................................................................................................................................................................................................................TTGTTCAATTGATTTCCTTTG...................................................................................................................................................21110.2730300000000
..........................................................................................................TCGGATTTTGCATATTTTATTCATCAG........................................................................................................................................................................................................................................................................................................2740.2510000000010
.............................................................................................................................................................................................................................................................................................................................................................AGGTGCTGCGAGTACGAGTC............................................................2090.2220110000000
.......................................................................................................................................................................................................................................................................................TTGACTATATTTGAAAAG-------------------------CACT.......................................................................................................22100.2020200000000
.......................................................................................................................................................................................................................................................................................TTGACTATATTTGAAAAG-------------------------CACTTG.....................................................................................................24100.2020200000000
...................................................................................AG------------------ACCTCGGATTTTGCATATTTTAT...............................................................................................................................................................................................................................................................................................................2550.2010100000000
.......................................................................................................................................................................................................................................................................................TTGACTATATTTGAAAAG-------------------------CACTTGGC...................................................................................................26100.2020000000020
..................................................................................................................TGCATATTTTATTCATCAGC.......................................................................................................................................................................................................................................................................................................2050.2010100000000
........................................................................................................................................................................................................................................................................................TGACTATATTTGAAAAG-------------------------CACTTGGC...................................................................................................25100.2020200000000
.................................................................................................................................................................................................................................................................................................TTGAAAAG-------------------------CACTTGGCTGGGG..............................................................................................21110.1820200000000
..............................................................................................................................................................................................................................................................................................TATTTGAAAAG-------------------------CACTTGGCTGGGGGATC..........................................................................................28110.1820010001000
..............................................................................................................................................................................................................................................................................................TATTTGAAAAG-------------------------CACTTGGCTGGGGGA............................................................................................26110.1820100000010
.................................................................................................................................................................................................................................................................................................TTGAAAAG-------------------------CACTTGGCTGGGGGATC..........................................................................................25110.1820200000000
..................................................................................................................................................................................................................................................................................................TGAAAAG-------------------------CACTTGGCTGGGG..............................................................................................20110.1820200000000
..........................................................................................................................TTATTCATCAGCATAGTCGTGGGCTCAT.......................................................................................................................................................................................................................................................................................2860.1710100000000
...........................................................................................................................TATTCATCAGCATAGTCGTGG.............................................................................................................................................................................................................................................................................................2160.1710010000000
..........................................................................................................................TTATTCATCAGCATAGTCGTGGG............................................................................................................................................................................................................................................................................................2360.1710100000000
................................................................................................................................................................................................................................................................................................................................................................TGCTGCGAGTACGAGTCATCAGAA.....................................................2470.1410100000000
.................................................................................................................................................................................................................................................................................................................................................TCGGAGGATCGGAGGTGCTGCGAG....................................................................2470.1410100000000
........................................................................................................................................................................................................................................................................................................................................................ATCGGAGGTGCTGCGAGTACGAGTCA...........................................................2670.1410000000100
...................................................................................................................................................................................................................................................................................................................................................................TGCGAGTACGAGTCATCAGAATT-------------------------------TA..................2570.1410100000000
...............................................................................................................................................................................................................................................................................................................................................................GTGCTGCGAGTACGAGTCATC.........................................................2170.1410100000000
...................................................................................................................................................................................................................................................................................................................................................GGAGGATCGGAGGTGCTGCG......................................................................2080.1310100000000
.............................................................................................................................TTCATCAGCATAGTCGTGGG............................................................................................................................................................................................................................................................................................2090.1110000100000
........................................................................................................................................................................................................................................................................TTCAATTGATTTCCTTTGACTATAT............................................................................................................................................2590.1110100000000
...........................................................................................................................................................................................................................................................................AATTGATTTCCTTTGACTATA.............................................................................................................................................2190.1110100000000
.....................................................................................................................................................................................................................................................................TTGTTCAATTGATTTCCTTTGACT................................................................................................................................................2490.1110100000000
...........................................................................................................................................................................................................................................................................AATTGATTTCCTTTGACTAT..............................................................................................................................................2090.1110100000000
.....................................................................................................................................................................................................................................................................TTGTTCAATTGATTTCCTTTGACTA...............................................................................................................................................2590.1110100000000
......................................................................................................................................................................................................................................................................................................................................TGGCTGGGGGATCGGAGGA....................................................................................1990.1110000000010
.........................................................................................................................................................................................................................................................................................................................................................TCGGAGGTGCTGCGAGTA..................................................................1890.1110100000000
..................................................................................TAG------------------ACCTCGGATTTTGCATATTT..................................................................................................................................................................................................................................................................................................................23200.1020100001000
........................................................................................................................................................................................................................................................................................TGACTATATTTGAAAAG-------------------------CACTTGG....................................................................................................24100.1010100000000
................................................................................................................................ATCAGCATAGTCGTGGGCT..........................................................................................................................................................................................................................................................................................19100.1010100000000
......................................................................................................................................................................................................................................................................................TTTGACTATATTTGAAAAG-------------------------CA.........................................................................................................21100.1010100000000
..............................................................................................................................................................................................................................................................................TGATTTCCTTTGACTATATTT..........................................................................................................................................21100.1010100000000
............................................................................................................................................................................................................................................................................................TATATTTGAAAAG-------------------------CACTTGGCTGGGGGA............................................................................................28100.1010000001000
................................................................................................................................ATCAGCATAGTCGTGGGCTCA........................................................................................................................................................................................................................................................................................21100.1010100000000
.....................................................................................................................................................................................................................................................................TTGTTCAATTGATTTCCTTTGAC.................................................................................................................................................23100.1010100000000
.......................................................................................................................................................................................................................................................................................TTGACTATATTTGAAAAG-------------------------CAC........................................................................................................21100.1010100000000
........................................................................................................................................................................................................................................................................................TGACTATATTTGAAAAG-------------------------CACTTG.....................................................................................................23100.1010100000000
...............................................................................................................................CATCAGCATAGTCGTGGGCTC.........................................................................................................................................................................................................................................................................................21100.1010100000000
.........................................................................................................................................................................................................................................................................................GACTATATTTGAAAAG-------------------------CACTTGGCTGGG...............................................................................................28100.1010100000000
...................................................................................................................................................................................................................................................................................TCCTTTGACTATATTTGAAAAG-------------------------CACT.......................................................................................................26100.1010010000000
.....................................................................................................................................................................................................................................................................TTGTTCAATTGATTTCCTTTGACA................................................................................................................................................24100.1010100000000
.........................................................................................................................................................TAA------------------------------------------------------------------------------------------------------TTTTTGTTCAATTGATTTCCTT.....................................................................................................................................................25110.0910100000000
......................................................................................................................................................................................................................................................................TGTTCAATTGATTTCCTTTG...................................................................................................................................................20110.0910100000000
..............................................................................................................................................................................................................................................................................................TATTTGAAAAG-------------------------CACTTGGCTGG................................................................................................22110.0910100000000
..............................................................................................................................................................................................................................................................................................TATTTGAAAAG-------------------------CACTTGGCTGGGG..............................................................................................24110.0910100000000
................................................................................................................................................................................................................................................................................................TTTGAAAAG-------------------------CACTTGGCTGGG...............................................................................................21110.0910100000000
..................................................................................................................................................................................................................................................................TTTTTGTTCAATTGATTTCC.......................................................................................................................................................20110.0910010000000
..............................................................................................................................................................................................................................................................................................TATTTGAAAAG-------------------------CACTTGGCTGGG...............................................................................................23110.0910100000000
..................................................................................................................................................................................................................................................................................................TGAAAAG-------------------------CACTTGGCTGGG...............................................................................................19110.0910100000000
....................................................................................................................................................................................................................................................................TTTGTTCAATTGATTTCCTT.....................................................................................................................................................20110.0910100000000
..................................................................................................................................................................................................................................................................................................TGAAAAG-------------------------CACTTGGCTGGGGT.............................................................................................21110.0910000100000
...............................................................................................................................................................................................................................................................................................ATTTGAAAAG-------------------------CACTTGGCTGGGGGATC..........................................................................................27110.0910100000000
..................................................................................................................................................................................................................................................................................................TGAAAAG-------------------------CACTTGGCTGGGGGAT...........................................................................................23110.0910100000000
..............................................................................................................................................................................................................................................................................................TATTTGAAAAG-------------------------CACTTGGCTGGGGG.............................................................................................25110.0910100000000
...............................................................................................................................................................................................................................................................................................ATTTGAAAAG-------------------------CACTTGGCTGGGG..............................................................................................23110.0910100000000
..................................................................................................................................................................................................................................................................................................TGAAAAG-------------------------CACTTGGCTGGGGGATT..........................................................................................24110.0910100000000
..............................................................................................................................................................................................................................................................................................TATTTGAAAAG-------------------------CACTTGGC...................................................................................................19120.0810100000000
..................................................................................................................................................................................................................................................................................................................................CACTTGGCTGGGGGATAA.........................................................................................18150.0710100000000
..................................................................................TAG------------------ACCTCGGATTTTGCATATTTA.................................................................................................................................................................................................................................................................................................................24200.0510000000100
...................................................................................AG------------------ACCTCGGATTTTGCATATT...................................................................................................................................................................................................................................................................................................................21200.0510100000000
..................................................................................TAG------------------ACCTCGGATTTTGCATAT....................................................................................................................................................................................................................................................................................................................21200.0510100000000
droWil2
CACTGAACGCGAGTGGAAGTGTACAAATACTCTTGCTATTCTTGACTTGGGTATGATTGT-TA-AGGTTTCGATATTTCCATTCG------------------AG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......CGCGAGTGGAAGTGTACAAATACT..............................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
..................................................GTATGATTGT-TA-AGGTTTCGAT...................................................................................................................................................................................................................................................................................................................................................................2211.00100001
droVir3
TTTATCTTGTTGCTGGGTATT-ACGCAAAT--TTAACGTAATTCTGTTT----------------------------------------------------------------------------------------------GGCTTGTAAATAA------------------------------------------------------------------------------------------------------TATTTGTTTATTTCATTGCATTTGTTTATATTTGGAGTA----------------------------------------------------------------------------------------------------------------------------------CASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................................................................................................................................................................................................................................................................TGTTTATTTCATTGCATTTGTTTAT..............................................................................................................................................2511.001000000000000000000000000000000010000000000000000000000000000000
.............................................................................................................................................................................................................................................................................TTCATTGCATTTGTTTATATTTGGAGT.....................................................................................................................................2711.001000000000000000000000000000000000000001000000000000000000000000
droMoj3
ATGAAATGTTGTCCA----------ATTATT---------------------------------------------------------TTGTGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTCTAGAATTGAAAAT-------------------------GAAATGCCTATGGGA-CAGA-----------GCTTTGTA------TGTTTGGACCTCACCAAATTGCCGCAAATACTACAGCAAATTTTTGCATCTTCCATTCTCTASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............................................................................................................................................................................................................................................................................................AATTGAAAAT-------------------------GAAATGCCTATGGGA-CA.........................................................................................2711.001100000
........................................................................................................................................................................................................................................................................................................T-------------------------GAAATGCCTATGGGA-CAGA-----------GCTTTGTA------..............................................................2811.001000001
droGri2
AACAGAACGTGAATGGAAATGCTCAAATACGCTCGCCGTACTTGATTTGGGTAT-------TT------ACTATACTGTATA---TATATATATT-TATATATACATT----GTACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-------------------------------------------GTATATTATASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.............TGGAAATGCTCAAATACGCTCGCCG.......................................................................................................................................................................................................................................................................................................................................................................................................25200.10202
.........TGAATGGAAATGCTCAAATACGCTC...........................................................................................................................................................................................................................................................................................................................................................................................................25200.05101
droAna3
GTTCGTA---------AAATATAGCAACACC---------------------------------------------------------------------------TCGTGGTCTGCGTATCTCTTTTTTAAAATAAATTATGAAGTTTTTATTAA------------------------------------------------------------------------------------------------------TTTTTATTTATTATATTTATT----------------------------------------------------------------------------------------------------------------------------------------------------CTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
AACAGAGAGGGAATGGAAATGCACAAATACGCTTGCTGTACTTAATCTTGGTATGTAAATGATTTTATTCCCAAATTAAT-TTAG------------------ATTTAGGATTAAAAATAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTGCASizeHit CountTotal NormTotal
No Reads
droKik1
CATACGC-------------------------------------------------------------------------------------------------------------------------------ATACGCATGGGCTCATTATTAA------------------------------------------------------------------------------------------------------TTTTTGTTCAGTTGATTTCCTTTACCCATATTTGAAGAGCTATT---------------------TCTTGGTTAGGGGGTCAAAAG---GGGGACAATTCGAG------------------------------------------------------------------TASizeHit CountTotal NormTotal
No Reads
droFic1
TCATCGGCATAGGCACGGGCGCATTATTA------------------------------------------------------------------------------------------------------------------------------A------------------------------------------------------------------------------------------------------TTTTTGTTCAATTGACTTCCTTTGCCTGTACTTGATCAGCTATTTCTTATTTCGACCTCCAA-------AGCGAGGGGGTCAAAGG---GGGGGCACTTTGGGTACTCGTTATTCGTACT-------------------------------CT-------------CTTGTSizeHit CountTotal NormTotal
No Reads
droEle1
CACTGGTAGTT-----------------------------GTGTGTTTATTTATGTATGT-AT----------------------------------------AGATC----TTAAG-----------------------------CTATCGTTGGAGTTCAGCTATTATATTATATTATTTCAGTGTACCAATTATGTAATTCTTGTGCCG-GCTGGCTATACTTCCGTGACAGGG--------------------------------GTGAAGCCGGCTGGCTATA-------CG-------------------------TCCGTGGCTGGGGGGTCGGTAGACCGTGGTTGCCGCTAG-------------------------------------------------------------------TSizeHit CountTotal NormTotal
No Reads
droRho1
GGATTAGGAAGAGTACATGTATG-------------------------------------------GCTATAGCATGAAC-TAGG------------------ACTTTTAAATTCGCACAA-----AAATTAACAAAATGGCGGACCTTTGAACAT------------------------------------------------------------------------------------------------------TTTTTGTTTAATTGCTTTCTT----------------------------------------------------------------------------------------------------------------------------------------------------TTSizeHit CountTotal NormTotal
No Reads
droBia1
AACAGAGCGTGAATGGAAATGCACAAACACTCTTGCAGTACTTGACTTGGGTAAGTAAAT-AT------TTTAAATCATAAGTAT------------------A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CSizeHit CountTotal NormTotal
No Reads
droTak1
ATTTTGCATATTTTA----TGCAT----------------------------------------------------------------ATGCATTTTATGCAAATATT----TTAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATATT--------------------------------------TTTATTGAA-ACGA-----------ACTTTG-----GTGTTTTCGGAATT-------------------------------GATCTATTT-TTATCCTATASizeHit CountTotal NormTotal
No Reads
droEug1
AACAGAACGGGAATGGAAATGTACAAATACTCTTGCAGTTCTGGATTTAGGTAAGTCAAT-TT------ATAAAATAGTATA---TAT---------------A--TAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATSizeHit CountTotal NormTotal
No Reads
dm3
AACAGAGCGTGAATGGAAATGTACAAACACTCTTGCTGTCCTTGACCTTGGTAAGAATAT-TT------GTTATACCAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........GTGAATGGAAATGTACAAACA................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TGTACAAACACTCTTGCTGTC.....................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000
...........AATGGAAATGTACAAACACT..............................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AACACTCTTGCTGTCCTTGACCTTGA..........................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GAGCGTGAATGGAAATGTACA....................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................ATGTACAAACACTCTTGCTGTCCTTGACC..............................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........GAATGGAAATGTACAAACACTCTT...........................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CAGAGCGTGAATGGAAATGTAC.....................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................ATGTACAAACACTCTTGCT........................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GAGCGTGAATGGAAATGTACAAACACT..............................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.......................CAAACACTCTTGCTGTCCTTGACCTT............................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........AATGGAAATGTACAAACACTCTTGCTGT......................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................CACTCTTGCTGTCCTTGACC..............................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........GAATGGAAATGTACAAACACTCTTGCT........................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TGTACAAACACTCTTGCTGT......................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.ACAGAGCGTGAATGGAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...........AATGGAAATGTACAAACACTCTTGCT........................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......GCGTGAATGGAAATGTACAA...................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AACACTCTTGCTGTCCTTGACCTT............................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TGTACAAACACTCTTGCTGTCC....................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
....GAGCGTGAATGGAAATGTA......................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GTGAATGGAAATGTACAAAC.................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TACAAACACTCTTGCTGTCCTTG.................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AACAGAGCGTGAATGGAAATGTACAAACA................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AACAGAGCGTGAATGGAAATGTACAAA..................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
AACAGAGCGTGAATGGAAAT.........................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
droSim2
AACAGAGCGTGAATGGAAATGTACAAACACTCTTGCTGTCCTTGACCTAGGTAAGAATAT-TT------GTTATACCATAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......CGTGAATGGAAATGTACAAAC.................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200000002000000000
..........GAATGGAAATGTACAAACACTCTTGCC........................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
....................GTACAAACACTCTTGCTGTCCTTGACC..............................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
.......................CAAACACTCTTGCTGTCCTT..................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
AACAGAGCGTGAATG..............................................................................................................................................................................................................................................................................................................................................................................................................................1511.00100000010000000000
............ATGGAAATGTACAAACACTCTTGCT........................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000000000
.........TGAATGGAAATGTAC.....................................................................................................................................................................................................................................................................................................................................................................................................................1530.33100000000001000000
droSec2
AACAGAGCGTGAATGGAAATGTACAAACACTCTTGCTGTCCTTGACCTAGGTAAGAATAT-TT------GTTATACCATAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..CAGAGCGTGAATGGAAATGTACAAACACT..............................................................................................................................................................................................................................................................................................................................................................................................................2911.0010100
.............................CTCTTGCTGTCCTTGACCTAG...........................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
.................AATGTACAAACACTCTTGCTGT......................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
droYak3
AACAGAGCGTGAATGGAAATGTACAAACACTCTTGCAGTCCTTGACTTAGGTAAATATAT-TT------GTTATACCATAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....GAGCGTGAATGGAAATGTACA....................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
droEre2
AAT------------------------CACGTTTGCAATTTCGGTTTCGGGTGTGTACAT-AT------ATAATATATTATA---T---------------AAG------------TACAT-----AATGTAATAAGTTGA--------------------------------------------------------------------CCGTGCCTAATTTAACCCCATAGAATGGTGCTTGTTAGCCCCATAGTATTTGATTTACGACTAATTTC----------------------------------GACTTACACAGCACGTGGCTGGGAGATCATTA----------------------------------------AAGTGTTCGGTAAACAAAA--------------TG-AAATTTTCGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 06/08/2015 at 04:32 PM