ID:

dpe_1641

 Coordinate:

scaffold_40:70478-70628 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-5.9

Flybase annnotation

exon [dper_GLEANR_12908:2]; CDS [Dper\GL12774-cds]; intron [Dper\GL12774-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TCTATTCTCATGTTTGCAAAGAAATGGCAGAAATATTATTGGGAATATAAAATAATTGTAGCACAGTGAAATACAAATGTTGGAGAGAGACACTTTGTGAAAGATCTAAAGGGCAAACGTGGCAAAGCAGAGCAATGAAAATCAAAGTGAAAAATCGAAAAACTGATGGACAAACTCTCTCCACTCTTTGCTCGTTTACAGACCCCATAGAGAAAGAGCAGCAGCTGAAGCTGTACACACGACTACCCGAG
******************************************************************************************((((((((..............))))).))).....................************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M021
embryo
 M042
female body
 V042
embryo
 V057
head
 V111
male body
..........................................................................................CACTTTGTGAAAGATCTAAAGGGC......................................................................................................................................... 24 0 1 3.00 3 3 0 0 0 0
......................................................................................................................GTGGCAAAGCAGAGCAATGAAAAT............................................................................................................. 24 0 1 2.00 2 2 0 0 0 0
..................................................................................................................AAACGTGGCAAAGCAGAGC...................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0
.......................................................................................................ATCTAAAGGGCAAACGTGGCAA.............................................................................................................................. 22 0 1 1.00 1 0 1 0 0 0
..................................................AATAATTGTAGCACAGTGAAATA.................................................................................................................................................................................. 23 0 1 1.00 1 0 0 1 0 0
.........................................................GTAGCACAGTGAAATACAAATGTTGGAG...................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................................................................................GCTGAAGCTGTACACACGACTACCCGAG 28 0 1 1.00 1 1 0 0 0 0
................................................................................................................................................................................................................................CTGAAGCTGTACACACGACCACCCGG. 26 2 1 1.00 1 1 0 0 0 0
........................................................................................GACACTTTGTGAAAGATCT................................................................................................................................................ 19 0 1 1.00 1 0 1 0 0 0
...............................................................................TTGGAGAGAGACACTTTGTGA....................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0
...................................................................GAAATACAAATGTTGGAGAG.................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
.......................................................................................................ATCTAAAGGGCAAACGTGGC................................................................................................................................ 20 0 1 1.00 1 0 0 0 0 1
...........................................................................AATGTTGGAGAGAGACACTTTGTGAAA..................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0

Anti-sense strand reads

AGATAAGAGTACAAACGTTTCTTTACCGTCTTTATAATAACCCTTATATTTTATTAACATCGTGTCACTTTATGTTTACAACCTCTCTCTGTGAAACACTTTCTAGATTTCCCGTTTGCACCGTTTCGTCTCGTTACTTTTAGTTTCACTTTTTAGCTTTTTGACTACCTGTTTGAGAGAGGTGAGAAACGAGCAAATGTCTGGGGTATCTCTTTCTCGTCGTCGACTTCGACATGTGTGCTGATGGGCTC
*************************************************************************************************************((((((((..............))))).))).....................****************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V057
head
 V042
embryo
 M042
female body
 M021
embryo
.......................................................................................................................................................................................GAGGTACGAACAAATGTCTGGG.............................................. 22 3 1 1.00 1 1 0 0 0
..................................................TTAATAACTTCGTGTCACT...................................................................................................................................................................................... 19 2 1 1.00 1 0 1 0 0
.................TTTCTGTACCGGCTTTAGAATA.................................................................................................................................................................................................................... 22 3 3 0.33 1 0 0 1 0
......................................................................................................................................................................................................................................GACATGTGGGCTGATGGCGT. 20 3 5 0.20 1 1 0 0 0
......................................................................................................................................................................................................................................GACATGTTGGATGATGGGCT. 20 3 8 0.13 1 1 0 0 0
......................................................................................................................................................................................................................TCTCGTCGTCGACTTCAACGTT............... 22 3 13 0.08 1 1 0 0 0
.................................................................................................................................................TCAGTTTTTAGCTTTTGGCC...................................................................................... 20 3 20 0.05 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_40:70428-70678 - dpe_1641 TCTA-----------TTC---TCATGTTTGCAAAGAAATGGCA--------------GAAATAT-TATTGGGAATATAAAATA----------------------------------------------------ATTGTAGCACAGTGA-----AAT---ACAAATGTTGGA------------------------------------------GAGAGACACTTTGTGAAAGATCTAAAGGGCA--------------------------------------AA------------------CGTGG----------------C-----------------A-----AA--GCAGAGCAA----TGAAAAT---C-AAAG--T-GAA----AAATCG----AAAAACTGATGGACAA--ACTCTCTCCACTC--TTTGCTCGTTTACAGACCCCATAGAGAAAGAG---------CAGCAGCTGAAGCTGTACACAC--GACTA-CC-------------------CGAG
dp5 XR_group8:7880747-7880997 - TCTA-----------TTC---TCATGTTTGCAAAGAAATGGCA--------------GAAATAT-TATTGGGAATATATAATA----------------------------------------------------ATTGTAGCACAG--------TGTAAAACAAATGCTGGA------------------------------------------GAGAGACACTTTGTGAAAGATCTAAAGGGCA--------------------------------------AA------------------CGTGG----------------C-----------------A-----AA--GCAGAGCAA----TGAAAAT---C-AAAG--T-GAA----AAATCG----AAAAACTGATGGACAA--ACTCTCTCCACTC--TTTGCTCGTTTACAGACCCCATAGAGAAAGAG---------CAGCAGCTGAAGCTGTACACAC--GACTA-CC-------------------CGAG
droWil2 scf2_1100000004830:485889-486142 + AATG-----------TAA---AATAGATGGGAAAAAAGTGAAAACGTATATACAAAT----------------------------ATACATATATGAAA-------------------------------------------------------AGTTCTGTCAGTTT-------------------------------------------------CAAACACTTTGTGAACGATCTCGAAAC-A--------------------------------------AT------------------AGTAAAAAAAAATGAATTGAATTGAAATACAAAATCAAAAAAAAAAATGAAAGAACTA----AAATAA----A-GAAA--T-CAAT---AAACT-----GAAAACTGATAGACAA--ACTCTCTCTACTCTATCTGCTCGTTTACAGAC---ACAGA------CCCCAC----------------------AGAC--GAACA-TT-------------------CAAC
droVir3 scaffold_13049:18873015-18873203 + TAAT------------T-------------------------------------------------------------------------------------------------------------------------GTGGC--------------------ATA---------TT--------------------------------AT--T-GCAAAACACTTTGTGAAAGGCTCGT----CA-----AATTCGAAATTAGGAC-------------------------------AAGAAACAGAA----------------A-----------------A-----AA--------A----------------G-AATA--T-AAA----AAATA-----TAAAACTGATGGAGAA--AAACTCTTTGCTC--TCTGCTCGTTTACAGACGGCCCACA------ACAAGAACAGCAGC----------------A-GCG----ACAACAAAAATTATGCAATACCTTAG
droMoj3 scaffold_6680:12351988-12352180 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACACTTTGTGAAAGGTTTTGCTAACTAAAACAGTTCGGAGTTGGGAAAACCTTAATTTAAAAAAAA------------------AAAAA----------------A-----------------A-----AA--------AAAA--------ATTAAATAAAAATTG--AAAAA----------TAAAACTGATAGAAGAAAACCCTCTTTGCTC--TCTGCTCGTTTACAGACGGCCAACG------ACAACCTAAACAGC---------------CAC--AACAA-CCTGAAAAAT-----------TATG
droGri2 scaffold_15110:19838976-19839091 + CACA-----------G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG-----------------------------------------------------------------------------------A----------------------------------------TGAA------A---------TAC----AAATCGAATATAAAACTGATAGAGAA--AAACTCTCTGCTC--TCTGCTCGTTTACAGACGGCCCACAACAAGAG---------CAGCAACAGCAGC-------G--------ACAACAAAATT-----------CAGG
droAna3 scaffold_13337:10831364-10831546 - CTAT------------T--------------GAAGAAATAATT--------------GAAACAA-TCTTGAAATTATG------------------------------------------------------------------------------------------------TGTAATAATAAAATGACCTATC-------------ATGCAATTATAACACTTTGTGGATGATCTAAAGAA---------------------------------------------------------------------------------------------------------AG--TT-AG-ACAACT---------------------AAA----ATACA-----AGAAACTGATGGACAA--A----CTCCACTC--TCTGCTCGTTTACAGAACCCGCAGA------CCAACAGGCATCGC----------------C------------------------------TAGG
droBip1 scf7180000396569:547626-547774 + AATA-----------A--------------------------------------------------------------------TAA--------------------------------------------------------------------ATTGACCTATC-------------------------------------------AT--G-CAATAACACTTTGTGGAAGATCTAAAGAA----------------------------------------AA------------------AGCAA----------------C-----------------C-----CG--------ACAACTA-------------------C--ACGAAATATT-----AAAAACTGATGGACAA--A----CTCCACTC--TCTGCTCGTTTACAGAACCCGCAGA------GCAACAAGCTGAGC----------------C------------------------------TAGG
droKik1 scf7180000302441:3190563-3190778 - TGCCTGAAACAAAGGTTTTATGTATATG-----------------------------------AATATCTAAAGTTTAA-----------------------------------------------------------------------------------CAATCT-GAA----------------------------------ATA-T--A-AGAAAACGCTTTGTGAAAGATCTAAAAACTA--------------------------------------AATGAAACTATAAAT-----AGCAA----------------C-----------------A-----GG--CT-AAACAA----TATAAAA---T-GCAA--T-GCA----AACTCC-A--TTCAACTGATAGAAAA--A-CC--TCTGCCT--TTCGCTCGTTTACAGAATCCGCAGA------GCGAGCAGCATCGC----------------C---G------C-------------------CAAC
droFic1 scf7180000454113:1859708-1859952 + TTTG-----------ATT---TTTTGATAGAAAATAACTGTCATCAAGAATCCAATTGTAAT-----------GTTTACATAAATA----------------------------------------CAAAAAA--ATCCTAAAATACTTATATAAAATCAGCAAACTTTGAA----------------------------------GCA-C--AAAGAAAAGACTTTGTGAAGGATCTAGCATGCA--------------------------------------AA------------------CGCAA----------------A-----------------A-----AG--CGAGAACTA----CGAAAG----C-AAAG--A-TTA----AAATC-----CAAAACTGATAGACAA--C-T---------C--TCTGCTCGTTTACAGAATCCGCAGA------GCAGCGAATGCGAC----------------C------------------------------ACCG
droEle1 scf7180000491193:4801959-4802093 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACTTTGTGAAAGATCTAGAGAGCA--------------------------------------AA------------------TGCAA----------------C-----------------A-----AG--CCAGAGCTA----CGGCAT----C-GA-G--T-GTA----ACATT-----CAAAACTGATAGACAA--C-TCTACC--CAC--TCTGCTCGTTTACAGAATCCGCAGA------GCACCGAATGCCAC----------------C------------------------------ATCG
droRho1 scf7180000777448:10578-10708 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACTTTGTGAAAGATCTTGAGAGCA--------------------------------------AA------------------CGCCC-----------------------------------------------AAGCGA----CGACAG----C-GAAA--T-TAC----AAATT-----TAAAACTGATAGACAA--C-TCTACCCACTC--TCTGCTCGTTTACAGAATCCGCAGA------GCACCGATTGCCGC----------------C------------------------------ATCG
droBia1 scf7180000302193:5593305-5593528 + TTTA-----------TTT---ATACATTTAGAA-------------------------------------------T---------AAGTTCATTGAAAACGGAATA----------------------------ATTTTTGC----------CGAATCAGACAACTTTGAA-TATTAT-----------------TGAATG---AGAA-T--T-AAAAAACACTTTGTGAAAGATCTAGATG-------------------------------------------------------------CGCTA----------------C-----------------A-----AG--TCAGAGCTA----AGAAAG----C-GGTG--T-TAC----AAATC-----AAAAACTGATAGACAA--C-TCTCTCCACTC--TCTGCTCGTTTACAGAATTCGCAAA------GCAACAAGTGCCGC----------------C------------------------------GTCG
droTak1 scf7180000415254:198052-198293 + TTTA-----------TTT---ACATATTAAGAT-------------------------------------------T---------AAGTTGAGAGAA--------------------------TATATTCAAGC--TTTTTA----------GTAATCAGCAAACTTTAAAACAGCGA-----------------TGAATG---AGAA-T--AATAAAAACACTTTGTGAAAGATCTAGAGAGCA--------------------------------------AG------------------CGCAA----------------C-----------------A-----GG--CCAGAGCTA----CGGCAG----C-GATG--T-TAA----AAATC-----CACAACTGATAGACAA--C-TCTCTCCACTC--TCTGCTCGTTTACAGAATCCGCAGA------GCAACGAGTGCCGC--CAAAATCTTTAGA---------------------------------CGC
droEug1 scf7180000409711:5519331-5519567 + CTTA-----------TTT---TAA-AT------------------------GCAAAT----------------------------ATAGTTGAATGTAAACTAAATAGCTTTTACCTGAAAGAATACAATGAAAT--TTTTA-----------AGAATCAAACAATTTTGAAAGAAGTA-----------------TCAATTAAGAGCA-T--GAAGAAAACACTTTGTGAAAGATCTATAGAGCA--------------------------------------AG------------------CGCAA----------------C-----------------A-----AG--------TGAA------------------G--T-TAA----ATACC-----CAAAACTGATAGACAA--C-TCTCTCCACTA--TCTGCTCGTTTACAGAATCCGCAGA------GCAACGA------C----------------C------------------------------ATCG
dm3 chr3L:20463056-20463227 - TTTT-----------TTC---T---ATT-----------------------------------T-TATTCGAAGTTTAAGTTAATGA--------------------------------------------------------------------AGTCAGCCAACTTTTAAA---------------------------------------------GAGCACTTTGTGGAAGATCCAAACAGCA--------------------------------------AA------------------CGCGA----------------A-----------------A-----GG--------CCAAGTT-------------------A--GTGAC----C------CAAATTGATAGACAA--A-TC--TC--CAA--TCTGCTCGTTTACAGAATCCGCAGA------GCAACGAGTGCCGT----------------C------------------------------CCCG
droSim2 3l:20032279-20032458 - dsi_14928 TATA---------CATTTTTTTTTTATT-----------------------------------T-TATTCGAAGTTTAAGTTAATGA--------------------------------------------------------------------AGTCAGCCAACTTTTAAA---------------------------------------------GAGCACTTTGTGGAAGATCCAAACAGCA--------------------------------------AA------------------CGCGA----------------A-----------------A-----GG--------CCAAGTT-------------------A--GCGAC----C------CAAATTGATAGACAA--A-TC--TC--CAA--TCTGCTCGTTTACAGAATCCGCAGA------GCAACGAGTGCCGG----------------C------------------------------ACCG
droSec2 scaffold_11:357992-358166 - ATTA-----------TTT---TTATATT-----------------------------------T-TATTCGAAGTTTAAGTTAATGA--------------------------------------------------------------------AGTCAGCCAACTTTTAAA---------------------------------------------GAGCACTTTGTGGAAGATCCAAACAGCA--------------------------------------AA------------------CGCGA----------------A-----------------A-----GG--------CCAAGTT-------------------A--GCGAC----C------CAAATTGATAGACAA--A-TC--TC--CAA--TCTGCTCGTTTACAGAATCCGCAGA------GCAACGAGTGCCGC----------------C------------------------------ACCG
droYak3 v2_chr3L_random_234:6451-6670 - TCTC-----------TTTTTTTTTTATT-----------------------------------A-GAATCGAAGTTTAAGCTAATTAAGTTGTTGGAAAAAG---------------------------------------------------AAACTCAGCCAACTTTAAAAGCGCAA-----------------CAAACAAATAACA-T--GATGAAAACACTTTGTGGAAGAACCCAACGGCA--------------------------------------AA------------------CGCGA----------------T-----------------T-----AG--------CCAAGCT-------------------A--GCGAC----C------CAAATTGATAGACAA--C-TC--TC--CAA--TCTGCTCGTTTACAGAATCCGCAGA------GCAACGAGTGCCGC----------------C------------------------------CTTG
droEre2 scaffold_4784:20164333-20164531 - TCGA-----------A---------------------------------------------------------GTTTAAGTTAATTAAGTTGATGGAAAAAT---------------------------------------------------AAACTCAGCCAACTTTAAAACAGCAA-----------------CAAATGAACAGCA-T--GATGAAAACACTTTGTGGAAGATCCGAATAGCA--------------------------------------AA------------------CGCGA----------------A-----------------G-----AG--------CCAAGCC-------------------A--GCGAC----C------CAAATTGATAGACAA--C-TC--TC--CAA--TCTGCTCGTTTACAGAATCCGCAGA------CCAACGAGTGCCGC----------------C------------------------------CACG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
TCTA-----------TTC---TCATGTTTGCAAAGAAATGGCA--------------GAAATAT-TATTGGGAATATAAAATA----------------------------------------------------ATTGTAGCACAGTGA-----AAT---ACAAATGTTGGA------------------------------------------GAGAGACACTTTGTGAAAGATCTAAAGGGCA--------------------------------------AA------------------CGTGG----------------C-----------------A-----AA--GCAGAGCAA----TGAAAAT---C-AAAG--T-GAA----AAATCG----AAAAACTGATGGACAA--ACTCTCTCCACTC--TTTGCTCGTTTACAGACCCCATAGAGAAAGAG---------CAGCAGCTGAAGCTGTACACAC--GACTA-CC-------------------CGAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................................................................................................................................................................................CACTTTGTGAAAGATCTAAAGGGC...............................................................................................................................................................................................................................................................................................2413.003300000
.................................................................................................................................................................................................................................................................................................................GTGG----------------C-----------------A-----AA--GCAGAGCAA----TGAAAAT---............................................................................................................................................................2412.002200000
.....................................................................................................................................................................................................................................................A--------------------------------------AA------------------CGTGG----------------C-----------------A-----AA--GCAGAGC............................................................................................................................................................................1911.001001000
..........................................................................................................................................................................................................................................ATCTAAAGGGCA--------------------------------------AA------------------CGTGG----------------C-----------------A-----A......................................................................................................................................................................................2211.001010000
...............................................................................AATA----------------------------------------------------ATTGTAGCACAGTGA-----AAT---A..................................................................................................................................................................................................................................................................................................................................................................................2311.001001000
..........................................................................................................................................GTAGCACAGTGA-----AAT---ACAAATGTTGGA------------------------------------------G............................................................................................................................................................................................................................................................................................................................2811.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGAAGCTGTACACAC--GACTA-CC-------------------CGAG2811.001100000
...........................................................................................................................................................................................................................GACACTTTGTGAAAGATCT......................................................................................................................................................................................................................................................................................................1911.001010000
........................................................................................................................................................................TTGGA------------------------------------------GAGAGACACTTTGTGA.............................................................................................................................................................................................................................................................................................................2111.001000010
....................................................................................................................................................GA-----AAT---ACAAATGTTGGA------------------------------------------GAG..........................................................................................................................................................................................................................................................................................................................2011.001100000
..........................................................................................................................................................................................................................................ATCTAAAGGGCA--------------------------------------AA------------------CGTGG----------------C-----------------.............................................................................................................................................................................................2011.001000001
....................................................................................................................................................................AATGTTGGA------------------------------------------GAGAGACACTTTGTGAAA...........................................................................................................................................................................................................................................................................................................2711.001100000
dp5
TCTA-----------TTC---TCATGTTTGCAAAGAAATGGCA--------------GAAATAT-TATTGGGAATATATAATA----------------------------------------------------ATTGTAGCACAG--------TGTAAAACAAATGCTGGA------------------------------------------GAGAGACACTTTGTGAAAGATCTAAAGGGCA--------------------------------------AA------------------CGTGG----------------C-----------------A-----AA--GCAGAGCAA----TGAAAAT---C-AAAG--T-GAA----AAATCG----AAAAACTGATGGACAA--ACTCTCTCCACTC--TTTGCTCGTTTACAGACCCCATAGAGAAAGAG---------CAGCAGCTGAAGCTGTACACAC--GACTA-CC-------------------CGAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................................................................................................................................................................................................TGAAAGATCTAAAGGGCA--------------------------------------AA------------------CGTGG----------------...............................................................................................................................................................................................................2513.0030000000300
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGAAGCTGTACACAC--GACTA-CC-------------------CGA.2711.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................CG----AAAAACTGATGGACAA--ACTCTCT........................................................................................................2511.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGAAGCTGTACACAC--GACTA-CC-------------------C...2611.0010100000000
..................................GAAATGGCA--------------GAAATAT-TATTGGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010000000
...........................................................................................................................................................................................................................GACACTTTGTGAAAGATCTAAAG..................................................................................................................................................................................................................................................................................................2311.0010000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................GGACAA--ACTCTCTCCACTC--TTTGCT..........................................................................................2511.0010100000000
................................................................................................................................................................................................................................TTTGTGAAAGATCTAAAGGGCA--------------------------------------AA------------------CG..................................................................................................................................................................................................................................2611.0010100000000
............................................................................................................................................................................................................................................CTAAAGGGCA--------------------------------------AA------------------CGTGG----------------C-----------------A-----AA--...................................................................................................................................................................................2111.0010000001000
.....................................................................................................................................................................................................................................GAAAGATCTAAAGGGCA--------------------------------------AA------------------CGT.................................................................................................................................................................................................................................2211.0010100000000
.......................ATGTTTGCAAAGAAATGGCA--------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..................................................................ATTGGGAATATATAATA----------------------------------------------------ATTGTAGC.....................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000100
..................................................................................................................................................................................................................................TGTGAAAGATCTAAAGGGCA--------------------------------------AA------------------CGTGG----------------...............................................................................................................................................................................................................2711.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................AAAACTGATGGACAA--ACTCTCT........................................................................................................2211.0010010000000
.................................................................................................................................................................ACAAATGCTGGA------------------------------------------GAGAGACACTT..................................................................................................................................................................................................................................................................................................................2311.0010100000000
droWil2
AATG-----------TAA---AATAGATGGGAAAAAAGTGAAAACGTATATACAAAT----------------------------ATACATATATGAAA-------------------------------------------------------AGTTCTGTCAGTTT-------------------------------------------------CAAACACTTTGTGAACGATCTCGAAAC-A--------------------------------------AT------------------AGTAAAAAAAAATGAATTGAATTGAAATACAAAATCAAAAAAAAAAATGAAAGAACTA----AAATAA----A-GAAA--T-CAAT---AAACT-----GAAAACTGATAGACAA--ACTCTCTCTACTCTATCTGCTCGTTTACAGAC---ACAGA------CCCCAC----------------------AGAC--GAACA-TT-------------------CAACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---ACAGA------CCCCAC----------------------AGAC--GAAC...........................2011.00100010
...................................................................................................................................................................................................................................GTGAACGATCTCGAAAC-A--------------------------------------AT------------------AGTAA...............................................................................................................................................................................................................................2511.00101000
.......................................................................................ACATATATGAAA-------------------------------------------------------AGTTCTGT..................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
........................................................T----------------------------ATACATATATGAAA-------------------------------------------------------AGTTCTGTCAGT..............................................................................................................................................................................................................................................................................................................................................................................2711.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGAC---ACAGA------CCCCAC----------------------AGAC--GAACA-T........................2811.00101000
...................................................................................................................................................................................................................................GTGAACGATCTCGAAAC-A--------------------------------------AT------------------AGT.................................................................................................................................................................................................................................2311.00100010
................................................................................................................................................................................................................................................................................................................AGTAAAAAAAAATGAATTGAATTGAA..........................................................................................................................................................................................................2611.00100010
.........................GATGGGAAAAAAGTGAAAACGTATATA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCTCTACTCTATCTGCTCGTT......................................................................................2411.00101000
..........................................................................................................................................................................................................................................................................................................................AATGAATTGAATTGAAATAC......................................................................................................................................................................................................2020.50100010
droVir3
TAAT------------T-------------------------------------------------------------------------------------------------------------------------GTGGC--------------------ATA---------TT--------------------------------AT--T-GCAAAACACTTTGTGAAAGGCTCGT----CA-----AATTCGAAATTAGGAC-------------------------------AAGAAACAGAA----------------A-----------------A-----AA--------A----------------G-AATA--T-AAA----AAATA-----TAAAACTGATGGAGAA--AAACTCTTTGCTC--TCTGCTCGTTTACAGACGGCCCACA------ACAAGAACAGCAGC----------------A-GCG----ACAACAAAAATTATGCAATACCTTAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................................................................................................................................................................................................................................T----CA-----AATTCGAAATTAGGAC-------------------------------AAGAAACA..................................................................................................................................................................................................................................27115.0015003000000000000002000010104400000000000000000000000000000000000
................................................................................................................................................................................T--------------------------------AT--T-GCAAAACACTTTGTGAAAGGCT.......................................................................................................................................................................................................................................................................................................26114.0014011100000000000001010100002600000000000000000000000000000000000
................................................................................................................................................................................T--------------------------------AT--T-GCAAAACACTTTGTGAAAGGC........................................................................................................................................................................................................................................................................................................25113.0013012000000000000003000000000600010000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TAAAACTGATGGAGAA--AAACTCTTTGC....................................................................................................27113.0013000000000000000033020020001200000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................TAGGAC-------------------------------AAGAAACAGAA----------------A-----------------A-----AA--------A----------------G-AATA--....................................................................................................................................................27113.0013000000000000000024200000002200100000000000000000000000000000000
................................................................................................................................................................................T--------------------------------AT--T-GCAAAACACTTTGTGAAAGGCTCG.....................................................................................................................................................................................................................................................................................................28110.0010003010000000000000000000003300000000000000000000000000000000000
................................................................................................................................................................................................................................TTTGTGAAAGGCTCGT----CA-----AATTCGAA.................................................................................................................................................................................................................................................................................2617.007000000000000000000000060000000100000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTGCTC--TCTGCTCGTTTACAGACGGC............................................................................2917.007001100000000001000000000012000000000000000000000000000000000001
................................................................................................................................................................................................................................TTTGTGAAAGGCTCGT----CA-----AATTCGAAAT...............................................................................................................................................................................................................................................................................2817.007000000000000000000000020002200000000001000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCTC--TCTGCTCGTTTACAGACGGC............................................................................2616.006002000000000000001100000000200000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGACGGCCCACA------ACAAGAACAGCA.....................................................2715.005001000000000002000000001000100000000000000000000000000000000000
....................................................................................................................................................................................................................................................................TTAGGAC-------------------------------AAGAAACAGAA----------------A-----------------A-----AA--------A----------------G-AATA--....................................................................................................................................................2815.005000000000000000000010210000000000000000000000000000000000000010
....................................................................................................................................................................TA---------TT--------------------------------AT--T-GCAAAACACTTTGTGAAAGGC........................................................................................................................................................................................................................................................................................................2815.005003000000000000001000000001000000000000000000000000000000000000
................................................................................................................................................................................................................................TTTGTGAAAGGCTCGT----CA-----AATTCGA..................................................................................................................................................................................................................................................................................2515.005000000000000000000000050000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTGCTC--TCTGCTCGTTTACAGAC...............................................................................2614.004001000000000000000000000020100000000000000000000000000000000000
.....................................................................................................................................................................................................................T-GCAAAACACTTTGTGAAAGGCTCGT----................................................................................................................................................................................................................................................................................................2614.004003000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGACGGCCCACA------ACAAGAACAGC......................................................2614.004000000000000002010000000000010000000000000000000000000000000000
.....................................................................................................................................................................................................................T-GCAAAACACTTTGTGAAAGGCTCGT----C...............................................................................................................................................................................................................................................................................................2713.003000000100000000001000010000000000000000000000000000000000000000
..................................................................................................................................................................................................................................TGTGAAAGGCTCGT----CA-----AATTCGAAAT...............................................................................................................................................................................................................................................................................2613.003000000100000000000100000100000000000000000000000000000000000000
................................................................................................................................................................................................................................TTTGTGAAAGGCTCGT----CA-----AATTCGAAA................................................................................................................................................................................................................................................................................2713.003000000000000000000000000002000000000001000000000000000000000000
................T-------------------------------------------------------------------------------------------------------------------------GTGGC--------------------ATA---------TT--------------------------------AT--T-GCAAAACACTTTG................................................................................................................................................................................................................................................................................................................2713.003000000000000000001000000000200000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCACA------ACAAGAACAGCAGC----------------A-GCG----ACA.......................2713.003000000000000000100010100000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TAAAACTGATGGAGAA--AAACTCTT.......................................................................................................2413.003000000000020000000000010000000000000000000000000000000000000000
................................................................................................................................................................................T--------------------------------AT--T-GCAAAACACTTTGTGAAAGGCTC......................................................................................................................................................................................................................................................................................................2713.003001000000000000000010000000100000000000000000000000000000000000
.................................................................................................................................................................................................................................TTGTGAAAGGCTCGT----CA-----AATTCGAAAT...............................................................................................................................................................................................................................................................................2713.003000000000000001000000000000000010000001000000000000000000000000
...T------------T-------------------------------------------------------------------------------------------------------------------------GTGGC--------------------ATA---------TT--------------------------------AT--T-GCAAAACACTTTG................................................................................................................................................................................................................................................................................................................2813.003000000000000000000000000001200000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCTC--TCTGCTCGTTTACAGACGGC............................................................................2713.003001000000000000000000000000000000000002000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TAAAACTGATGGAGAA--AAACTCTTTGCT...................................................................................................2812.002000000000000000000000110000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTC--TCTGCTCGTTTACAGACGGC............................................................................2512.002000000000000000000000010000100000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................AACTGATGGAGAA--AAACTCTTTGCTC--TC..............................................................................................2812.002000000000000000010000010000000000000000000000000000000000000000
...............................................................................................................................................................................TT--------------------------------AT--T-GCAAAACACTTTGTGAAAGGC........................................................................................................................................................................................................................................................................................................2612.002002000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................TGAAAGGCTCGT----CA-----AATTCGAAATTAG............................................................................................................................................................................................................................................................................2712.002000000000000000000001000100000000000000000000000000000000000000
............................................................................................................................................................................................................................................................ATTCGAAATTAGGAC-------------------------------AAGAAACAGAA----------------...............................................................................................................................................................................................................2612.002000000000000000000000000001100000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................T-AAA----AAATA-----TAAAACTGATGGAGAA--AAAC...........................................................................................................2912.002001000000010000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................ACACTTTGTGAAAGGCTCGT----C...............................................................................................................................................................................................................................................................................................2112.002020000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC----------------A-GCG----ACAACAAAAATTATGCAATACCT...2912.002002000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................TAGGAC-------------------------------AAGAAACAGAA----------------A-----------------A-----AA--------A----------------G-AAT.......................................................................................................................................................2612.002001000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAACAGCAGC----------------A-GCG----ACAACAAA..................2512.002000000000000000001000000010000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................TTCGAAATTAGGAC-------------------------------AAGAAACAGAA----------------A-----------------A-----AA--------.............................................................................................................................................................................2912.002000000000000000000000010000000000000000000000000000000000000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTCGTTTACAGACGGCCCACA------AC...............................................................2512.002001000000000000100000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC----------------A-GCG----ACAACAAAAATTATGCAATACC....2812.002000000000000000000000010001000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................TC--TCTGCTCGTTTACAGACGGCCCACA------.................................................................2712.002000100000000000000000000001000000000000000000000000000000000000
.................................................................................................................................................................................................................................TTGTGAAAGGCTCGT----CA-----AATTCGAAATT..............................................................................................................................................................................................................................................................................2812.002002000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................AACTGATGGAGAA--AAACTCTTTGCTC--................................................................................................2612.002000000000000000001010000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................A--AAACTCTTTGCTC--TCTGCTCGTT......................................................................................2412.002000000000000000000010100000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................GCTC--TCTGCTCGTTTACAGACGGCCCAC........................................................................2811.001000000000000000000000000000000000000000000000000000000000000001
....................................................................................................................................................................................................................................................CA-----AATTCGAAATTAGGAC-------------------------------AAGAAAC...................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................AA--AAACTCTTTGCTC--TCTGCTCGTT......................................................................................2511.001000000000000001000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................TGAAAGGCTCGT----CA-----AATTCGAAATTAA............................................................................................................................................................................................................................................................................2711.001000000100000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................GGAC-------------------------------AAGAAACAGAA----------------A-----------------A-----A......................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAACAGCAGC----------------A-GCG----AC........................1911.001000000000000000000000000100000000000000000000000000000000000000
.............................................................................................................................................................................................................................CACTTTGTGAAAGGCTCGT----CA-----AA.......................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-GCG----ACAACAAAAATTATGCA.........2111.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................GAA--AAACTCTTTGCTC--TCTGCTCGTT......................................................................................2611.001000000000000000100000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAGCAGC----------------A-GCG----ACAACAAAAAT...............2511.001000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................................................................................................T----CA-----AATTCGAAATTAGGAC-------------------------------AAGAAA....................................................................................................................................................................................................................................2511.001000000000000000000000001000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................TC--TCTGCTCGTTTACAGACGGCCC..........................................................................2411.001000000000000000000000001000000000000000000000000000000000000000
.................................................................................................................................................................................................................AT--T-GCAAAACACTTTGTGAAAGGCTCGT----................................................................................................................................................................................................................................................................................................2811.001000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................TTAGGAC-------------------------------AAGAAACAGAA----------------A-----------------A-----AA--------A----------------G-AA........................................................................................................................................................2611.001000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................A-----AATTCGAAATTAGGAC-------------------------------AAGAAACAGA................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................AAAACTGATGGAGAA--AAACTCTTTGCTC--T...............................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................T--T-GCAAAACACTTTGTGAAAGGCTCGT----................................................................................................................................................................................................................................................................................................2711.001000010000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCTCGTTTACAGACGG.............................................................................1911.001010000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................CTCGT----CA-----AATTCGAAATTAGGAC-------------------------------AAGAA.....................................................................................................................................................................................................................................2811.001000000000000000000000000001000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................TTCGAAATTAGGAC-------------------------------AAGAAACA..................................................................................................................................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
..................................................................................................................................................................................................................T--T-GCAAAACACTTTGTGAAAGGC........................................................................................................................................................................................................................................................................................................2311.001000000000000000000100000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................ACTGATGGAGAA--AAACTCTTTGCTC--TC..............................................................................................2711.001000000000000000000000100000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................TA-----TAAAACTGATGGAGAA--AAACTCTT.......................................................................................................2611.001000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................................................................GCAAAACACTTTGTGAAAGGCTCGT----CA-----.........................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TGATGGAGAA--AAACTCTTTGCTC--TCTGC...........................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................TGTGAAAGGCTCGT----CA-----AATTCGAAATTA.............................................................................................................................................................................................................................................................................2811.001000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................................................................................AAGGCTCGT----CA-----AATTCGAAATTAGG...........................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000001000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................CTGATGGAGAA--AAACTCTTTGCTC--TC..............................................................................................2611.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................AACTGATGGAGAA--AAACT..........................................................................................................1811.001000000000000000000000000000000000000000000000000000000000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCTC--TCTGCTCGTTTACAGAC...............................................................................2411.001000000000000000010000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................TTGTGAAAGGCTCGT----CA-----AATTCGA..................................................................................................................................................................................................................................................................................2411.001000000000000000000000010000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA------ACAAGAACAGCAGC----------------A-GCG----ACAAC.....................2611.001000000000000000100000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................ATTAGGAC-------------------------------AAGAAACAGAA----------------A-----------------A-----AA--------A----------------A-..........................................................................................................................................................2511.001000000000000000000000000001000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................AAACTGATGGAGAA--AAACTCTTTGCT...................................................................................................2611.001000000000000000000000010000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................TTCGAAATTAGGAC-------------------------------AAGAAACAGAA----------------...............................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGC----------------A-GCG----ACAACAAAAATTATGC..........2711.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGACGGCCCACA------ACAAGAACAGCAG....................................................2811.001000000000000000000010000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................TGTGAAAGGCTCGT----CA-----AATTCGAAA................................................................................................................................................................................................................................................................................2511.001000000000000000000000010000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................T----CA-----AATTCGAAATTAGGAC-------------------------------AAGAAAC...................................................................................................................................................................................................................................2611.001000000000000000000000000010000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................GGAC-------------------------------AAGAAACAGAA----------------A-----------------A-----AA--------A----------------G-AATA--....................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................TGAAAGGCTCGT----CA-----AATTCGAA.................................................................................................................................................................................................................................................................................2211.001000000000000000000000000001000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................TTCGAAATTAGGAC-------------------------------AAGAAACAGAA----------------A-----------------A-----A......................................................................................................................................................................................2811.001000000000000000000000010000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGACGGCCCACA------ACAAGAAC.........................................................2311.001000000000000000000000100000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................AATTCGAAATTAGGAC-------------------------------AAGAAAC...................................................................................................................................................................................................................................2311.001000000000000000000010000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................AGGCTCGT----CA-----AATTCGAAATTAGGAC-------------------------------A.........................................................................................................................................................................................................................................2711.001000000000000000000000000000010000000000000000000000000000000000
....................................................................................................................................................................................................................................TGAAAGGCTCGT----CA-----AATTCGAAATT..............................................................................................................................................................................................................................................................................2511.001100000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................AAAACTGATGGAGAA--AAACTCTTTGC....................................................................................................2611.001000000000000000001000000000000000000000000000000000000000000000
..AT------------T-------------------------------------------------------------------------------------------------------------------------GTGGC--------------------ATA---------TT--------------------------------AT--T-GCAAAACACT...................................................................................................................................................................................................................................................................................................................2611.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................GT----CA-----AATTCGAAATTAGG...........................................................................................................................................................................................................................................................................1811.001000000000000001000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................TTTGTGAAAGGCTCGT----CA-----AATTC....................................................................................................................................................................................................................................................................................2311.001000000000000000000000010000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTC--TCTGCTCGTTTACAGACGGCC...........................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TAAAACTGATGGAGAA--AAACT..........................................................................................................2111.001000000000000000010000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................T-AAA----AAATA-----TAAAACTGATGGAGAA--A..............................................................................................................2611.001000000000000000000000000001000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................A--T-AAA----AAATA-----TAAAACTGATGGAGAA--AA.............................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................ACACTTTGTGAAAGGCTCGT----CA-----AATTC....................................................................................................................................................................................................................................................................................2711.001000000000000000000000010000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................GAA--AAACTCTTTGCTC--TCTGCTCGT.......................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................TCGT----CA-----AATTCGAAATTAGGAC-------------------------------AAGAAAC...................................................................................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................TGAAAGGCTCGT----CA-----AATTCGAAATTA.............................................................................................................................................................................................................................................................................2611.001000000000000000000000010000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................CGT----CA-----AATTCGAAATTAGGAC-------------------------------A.........................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................................................................................................AATTCGAAATTAGGAC-------------------------------AAGAAACAGA................................................................................................................................................................................................................................2611.001000000000000000000000000001000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................AAGAAACAGAA----------------A-----------------A-----AA--------A----------------G-AATA--T-AAA----A..........................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACA------ACAAGAACAGCAGC----------------A-GCG----ACA.......................2611.001000000000000000000000000001000000000000000000000000000000000000
.......................................................................................................................................................................................................................................AAGGCTCGT----CA-----AATTCGAAAT...............................................................................................................................................................................................................................................................................2111.001000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................................................................................................................................TTGTGAAAGGCTCGT----CA-----AATTCGAAA................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................TAGGAC-------------------------------AAGAAACAGAA----------------A-----------------A-----AA--------A----------------G-A.........................................................................................................................................................2411.001000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................GAAAGGCTCGT----CA-----AATTCGAA.................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................GGCTCGT----CA-----AATTCGAAATTAGGAC-------------------------------A.........................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................CA-----AATTCGAAATTAGGAC-------------------------------AAGAAACAGA................................................................................................................................................................................................................................2811.001000000000000000000010000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................TCGAAATTAGGAC-------------------------------AAGAAACAGAA----------------A-----------------A-----A......................................................................................................................................................................................2711.001000000000000000000000000010000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGC----------------A-GCG----ACAACAAAAATTATGC..........2811.001000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTTTGCTC--TCTGCTCGTTT.....................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................TA-----TAAAACTGATGGAGAA--AAAA...........................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................CGT----CA-----AATTCGAAATTAGGAC-------------------------------AAGA......................................................................................................................................................................................................................................2511.001000000000000000000000000001000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTTTGCTC--TCTGCTCGTTTACAGAC...............................................................................2711.001000000000000000000000000000000000000000000000000000000000000001
.......................................................................................................................................................................................................................................AAGGCTCGT----CA-----AATTCGAAATTAGGAC-------------------------------..........................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................TTCGAAATTAGGAC-------------------------------AAGAAACAGAA----------------A-----------------A-----.......................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................AATTCGAAATTAGGAC-------------------------------AAGA......................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................................................................................................CGAAATTAGGAC-------------------------------AAGAAACAGAA----------------A-----------------A-----AA--------.............................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCCACA------ACAAGAACAGCA.....................................................2011.001000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTACAGACGGCCCACA------ACAAGAACAGC......................................................2811.001010000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCTC--TCTGCTCGTTTACAGACGGCC...........................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
...T------------T-------------------------------------------------------------------------------------------------------------------------GTGGC--------------------ATA---------TT--------------------------------AT--T-GCAAAACACTTTT................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000010000000000000000000000000000000000000000
TAAT------------T-------------------------------------------------------------------------------------------------------------------------GTGGC--------------------ATA---------TT--------------------------------AT--T-GCAAAACACT...................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000010000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACAGCAGC----------------A-GCG----ACA.......................1811.001000000000000000000000000000000010000000000000000000000000000000
................T-------------------------------------------------------------------------------------------------------------------------GTGGC--------------------ATA---------TT--------------------------------AT--T-GCAAAA.......................................................................................................................................................................................................................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................TA--T-AAA----AAATA-----TAAAACTGATGGAGAA--...............................................................................................................2711.001000000000000000000000000001000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................AGGAC-------------------------------AAGAAACAGAA----------------A-----------------A-----AA--------A----------------............................................................................................................................................................2111.001010000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................T-GCAAAACACTTTGTGAAA...........................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................TGAAAGGCTCGT----CA-----AATTCGA..................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000001000000000000000000000000
.....................................................................................................................................................................................................................T-GCAAAACACTTTGTGAAAGGCTCGT----CA-----.........................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------ACAAGAACAGCAGC----------------A-GCG----..........................1911.001000000000000000000001000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................ATTCGAAATTAGGAC-------------------------------AAGAAACAGA................................................................................................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
.AAT------------T-------------------------------------------------------------------------------------------------------------------------GTGGC--------------------ATA---------TT--------------------------------AT--T-GCAAA........................................................................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................T--T-GCAAAACACTTTGTGAAAGGCT.......................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000001000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTCTTTGCTC--TCTGCTCGT.......................................................................................2211.001000000000000010000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................TTGTGAAAGGCTCGT----CA-----AATTCGAA.................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000010000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACAGACGGCCCACA------ACAAGAACAGC......................................................2711.001000000000000000000000010000000000000000000000000000000000000000
............................................................................................................................................................................................................................................TCGT----CA-----AATTCGAAATTAGGAC-------------------------------AAGA......................................................................................................................................................................................................................................2611.001000000000000000000001000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................A-----TAAAACTGATGGAGAA--AA.............................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................A----AAATA-----TAAAACTGATGGAGAA--AAACT..........................................................................................................2711.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TGATGGAGAA--AAACTCTTTGCTC--T...............................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................AAAACACTTTGTGAAAGGCTCGT----CA-----AA.......................................................................................................................................................................................................................................................................................2711.001000000000000000000010000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCTC--TCTGCTCGTTTACAGACGGCC...........................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................CTGATGGAGAA--AAACTCTTTGCTC--TCTG............................................................................................2811.001000000000000000000010000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................A-----TAAAACTGATGGAGAA--AAACTCT........................................................................................................2411.001000000000010000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................CACTTTGTGAAAGGCTCGT----CA-----AATTC....................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGC----------------A-GCG----ACAACAAAAATTATGC..........2511.001000000000000000100000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C----------------A-GCG----ACAACAAAAATTATGCAATACCT...2811.001000000000000000000000000001000000000000000000000000000000000000
.........................................................................................................................................................................................................................AAAACACTTTGTGAAAGGCTCGT----CA-----AAT......................................................................................................................................................................................................................................................................................2811.001000000000000000000000000001000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAGCAGC----------------A-GCG----ACAACAAAAATTA.............2711.001000000000000000000000000001000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCTC--TCTGCTCGTTTACAGACGG.............................................................................2511.001000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................................................................A---------TT--------------------------------AT--T-GCAAAACACTTTGTGAAAGGCT.......................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACAGACGGCCCACA------ACAAGAACAGCA.....................................................2811.001000000000000000000000010000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................TCGAAATTAGGAC-------------------------------AAGAAACAGAA----------------A-----------------A-----AA--------.............................................................................................................................................................................2811.001000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGCTC--TCTGCTCGTTTACAGACGGC............................................................................2811.001000010000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGC----------------A-GCG----ACAACAAAA.................2220.501001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACA------ACAAGAACAGCAGC----------------...................................1920.501000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------ACAAGAACAGCAGC----------------A-GC...............................18150.071001000000000000000000000000000000000000000000000000000000000000
droMoj3
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACACTTTGTGAAAGGTTTTGCTAACTAAAACAGTTCGGAGTTGGGAAAACCTTAATTTAAAAAAAA------------------AAAAA----------------A-----------------A-----AA--------AAAA--------ATTAAATAAAAATTG--AAAAA----------TAAAACTGATAGAAGAAAACCCTCTTTGCTC--TCTGCTCGTTTACAGACGGCCAACG------ACAACCTAAACAGC---------------CAC--AACAA-CCTGAAAAAT-----------TATGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................................................................................................................................................................................................................................................AAAACAGTTCGGAGTTGGGAA.........................................................................................................................................................................................................................................................................2112.002100001
........................................................................................................................................................................................................................................................AACAGTTCGGAGTTGGGAA.........................................................................................................................................................................................................................................................................1912.002000002
.....................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCTCTTTGCTC--TCTGCTCGTTTACAGA................................................................................2911.001100000
......................................................................................................................................................................................................................................................AAAACAGTTCGGAGTTGGGA..........................................................................................................................................................................................................................................................................2011.001100000
...................................................................................................................................................................................................................................................ACTAAAACAGTTCGGAGTTGGGAAA........................................................................................................................................................................................................................................................................2511.001000001
........................................................................................................................................................................................................................................................AACAGTTCGGAGTTGGGAAAACCT....................................................................................................................................................................................................................................................................2411.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCTC--TCTGCTCGTTTACA..................................................................................2011.001100000
.....................................................................................................................................................................................................................................................TAAAACAGTTCGGAGTTGGGAAAACCT....................................................................................................................................................................................................................................................................2711.001100000
........................................................................................................................................................................................................................................................AACAGTTCGGAGTTGGGAAA........................................................................................................................................................................................................................................................................2011.001000001
.......................................................................................................................................................................................................................................................AAACAGTTCGGAGTTGGGAA.........................................................................................................................................................................................................................................................................2011.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................CTC--TCTGCTCGTTTACAGACGGCCAACG------A................................................................2911.001100000
.............................................................................................................................................................................................................................CACTTTGTGAAAGGTTTTGCTAACTA.............................................................................................................................................................................................................................................................................................2611.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAACCCTCTTTGCTC--TCTGCTCGT.......................................................................................2611.001100000
..............................................................................................................................................................................................................................................TGCTAACTAAAACAGTTCGGAGTTGGG...........................................................................................................................................................................................................................................................................2711.001000001
..................................................................................................................................................................................................................................................................................ATTTAAAAAAAA------------------AAAAA----------------A-----------------A-----A......................................................................................................................................................................................20200.051000100
................................................................................................................................................................................................................................................................................TAATTTAAAAAAAA------------------AAAAA----------------A-----------------A-----AA--------.............................................................................................................................................................................23200.051100000
droGri2
CACA-----------G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG-----------------------------------------------------------------------------------A----------------------------------------TGAA------A---------TAC----AAATCGAATATAAAACTGATAGAGAA--AAACTCTCTGCTC--TCTGCTCGTTTACAGACGGCCCACAACAAGAG---------CAGCAACAGCAGC-------G--------ACAACAAAATT-----------CAGGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGACGGCCCACAACAAGAG---------CAG....................................................2511.00110
.................................................................................................................................................................................................................................................................................................................................................................................................................TATAAAACTGATAGAGAA--AAACTCTC.......................................................................................................2611.00110
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTCGTTTACAGACGGCCCACA.......................................................................2311.00110
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAGAG---------CAGCAACAGCAGC-------G--------AC........................2320.50110
droAna3
CTAT------------T--------------GAAGAAATAATT--------------GAAACAA-TCTTGAAATTATG------------------------------------------------------------------------------------------------TGTAATAATAAAATGACCTATC-------------ATGCAATTATAACACTTTGTGGATGATCTAAAGAA---------------------------------------------------------------------------------------------------------AG--TT-AG-ACAACT---------------------AAA----ATACA-----AGAAACTGATGGACAA--A----CTCCACTC--TCTGCTCGTTTACAGAACCCGCAGA------CCAACAGGCATCGC----------------C------------------------------TAGGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................GACAA--A----CTCCACTC--TCTGCTCGTTTACA..................................................................................2811.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................GGACAA--A----CTCCACTC--TCTGCT..........................................................................................2111.001100000
droBip1
AATA-----------A--------------------------------------------------------------------TAA--------------------------------------------------------------------ATTGACCTATC-------------------------------------------AT--G-CAATAACACTTTGTGGAAGATCTAAAGAA----------------------------------------AA------------------AGCAA----------------C-----------------C-----CG--------ACAACTA-------------------C--ACGAAATATT-----AAAAACTGATGGACAA--A----CTCCACTC--TCTGCTCGTTTACAGAACCCGCAGA------GCAACAAGCTGAGC----------------C------------------------------TAGGSizeHit CountTotal NormTotal
No Reads
droKik1
TGCCTGAAACAAAGGTTTTATGTATATG-----------------------------------AATATCTAAAGTTTAA-----------------------------------------------------------------------------------CAATCT-GAA----------------------------------ATA-T--A-AGAAAACGCTTTGTGAAAGATCTAAAAACTA--------------------------------------AATGAAACTATAAAT-----AGCAA----------------C-----------------A-----GG--CT-AAACAA----TATAAAA---T-GCAA--T-GCA----AACTCC-A--TTCAACTGATAGAAAA--A-CC--TCTGCCT--TTCGCTCGTTTACAGAATCCGCAGA------GCGAGCAGCATCGC----------------C---G------C-------------------CAACSizeHit CountTotal NormTotal
No Reads
droFic1
TTTG-----------ATT---TTTTGATAGAAAATAACTGTCATCAAGAATCCAATTGTAAT-----------GTTTACATAAATA----------------------------------------CAAAAAA--ATCCTAAAATACTTATATAAAATCAGCAAACTTTGAA----------------------------------GCA-C--AAAGAAAAGACTTTGTGAAGGATCTAGCATGCA--------------------------------------AA------------------CGCAA----------------A-----------------A-----AG--CGAGAACTA----CGAAAG----C-AAAG--A-TTA----AAATC-----CAAAACTGATAGACAA--C-T---------C--TCTGCTCGTTTACAGAATCCGCAGA------GCAGCGAATGCGAC----------------C------------------------------ACCGSizeHit CountTotal NormTotal
No Reads
droEle1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACTTTGTGAAAGATCTAGAGAGCA--------------------------------------AA------------------TGCAA----------------C-----------------A-----AG--CCAGAGCTA----CGGCAT----C-GA-G--T-GTA----ACATT-----CAAAACTGATAGACAA--C-TCTACC--CAC--TCTGCTCGTTTACAGAATCCGCAGA------GCACCGAATGCCAC----------------C------------------------------ATCGSizeHit CountTotal NormTotal
No Reads
droRho1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACTTTGTGAAAGATCTTGAGAGCA--------------------------------------AA------------------CGCCC-----------------------------------------------AAGCGA----CGACAG----C-GAAA--T-TAC----AAATT-----TAAAACTGATAGACAA--C-TCTACCCACTC--TCTGCTCGTTTACAGAATCCGCAGA------GCACCGATTGCCGC----------------C------------------------------ATCGSizeHit CountTotal NormTotal
No Reads
droBia1
TTTA-----------TTT---ATACATTTAGAA-------------------------------------------T---------AAGTTCATTGAAAACGGAATA----------------------------ATTTTTGC----------CGAATCAGACAACTTTGAA-TATTAT-----------------TGAATG---AGAA-T--T-AAAAAACACTTTGTGAAAGATCTAGATG-------------------------------------------------------------CGCTA----------------C-----------------A-----AG--TCAGAGCTA----AGAAAG----C-GGTG--T-TAC----AAATC-----AAAAACTGATAGACAA--C-TCTCTCCACTC--TCTGCTCGTTTACAGAATTCGCAAA------GCAACAAGTGCCGC----------------C------------------------------GTCGSizeHit CountTotal NormTotal
No Reads
droTak1
TTTA-----------TTT---ACATATTAAGAT-------------------------------------------T---------AAGTTGAGAGAA--------------------------TATATTCAAGC--TTTTTA----------GTAATCAGCAAACTTTAAAACAGCGA-----------------TGAATG---AGAA-T--AATAAAAACACTTTGTGAAAGATCTAGAGAGCA--------------------------------------AG------------------CGCAA----------------C-----------------A-----GG--CCAGAGCTA----CGGCAG----C-GATG--T-TAA----AAATC-----CACAACTGATAGACAA--C-TCTCTCCACTC--TCTGCTCGTTTACAGAATCCGCAGA------GCAACGAGTGCCGC--CAAAATCTTTAGA---------------------------------CGCSizeHit CountTotal NormTotal
No Reads
droEug1
CTTA-----------TTT---TAA-AT------------------------GCAAAT----------------------------ATAGTTGAATGTAAACTAAATAGCTTTTACCTGAAAGAATACAATGAAAT--TTTTA-----------AGAATCAAACAATTTTGAAAGAAGTA-----------------TCAATTAAGAGCA-T--GAAGAAAACACTTTGTGAAAGATCTATAGAGCA--------------------------------------AG------------------CGCAA----------------C-----------------A-----AG--------TGAA------------------G--T-TAA----ATACC-----CAAAACTGATAGACAA--C-TCTCTCCACTA--TCTGCTCGTTTACAGAATCCGCAGA------GCAACGA------C----------------C------------------------------ATCGSizeHit CountTotal NormTotal
No Reads
dm3
TTTT-----------TTC---T---ATT-----------------------------------T-TATTCGAAGTTTAAGTTAATGA--------------------------------------------------------------------AGTCAGCCAACTTTTAAA---------------------------------------------GAGCACTTTGTGGAAGATCCAAACAGCA--------------------------------------AA------------------CGCGA----------------A-----------------A-----GG--------CCAAGTT-------------------A--GTGAC----C------CAAATTGATAGACAA--A-TC--TC--CAA--TCTGCTCGTTTACAGAATCCGCAGA------GCAACGAGTGCCGT----------------C------------------------------CCCGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTACAGAATCCGCAGA------GCAACGAGT........................................................26114.00140000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000200100000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000001032200000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGAATCCGCAGA------GCAACGAGT........................................................24114.00140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001221200000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACAGAATCCGCAGA------GCAACGAGT........................................................25113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000100000000100000000000000000000000000000000000000000000000000000000000000000000000010000000000000000200000011310000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTACAGAATCCGCAGA------GCAACGAG.........................................................2516.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACAGAATCCGCAGA------GCAACGAGTGCC.....................................................2815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACAGAATCCGCAGA------GCAACGAG.........................................................2415.0050000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................TTGTGGAAGATCCAAACAGCA--------------------------------------AA------------------CGC.................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000001000000000000000000000000
..........................................................................................................................................................................................................................GAGCACTTTGTGGAAGAT........................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGAATCCGCAGA------GCAACGAGTGCCGT----------------C------------------------------....3013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................AGTCAGCCAACTTTTAAA---------------------------------------------GAGCACT...................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................TGA--------------------------------------------------------------------AGTCAGCCAACTTTTAAA---------------------------------------------GAGCACT...................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................AAA---------------------------------------------GAGCACTTTGTGGAAGATC.......................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000100000000000
......................................................................................................................................................................TTTTAAA---------------------------------------------GAGCACTTTGTGGAAGATCCA.....................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
....................................................................................TGA--------------------------------------------------------------------AGTCAGCCAACTTTTAAA---------------------------------------------GAGC......................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................CTTTGTGGAAGATCCAAACAGCA--------------------------------------AA------------------CG..................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACAGAATCCGCAGA------GCAACGAGTGC......................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA------GCAACGAGTGCCGT----------------C------------------------------CCCG2112.0020000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................TAAA---------------------------------------------GAGCACTTTGTGGAAGATCCAAAC..................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCAGA------GCAACGAGTGCCGT----------------C------------------------------C...2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGAATCCGCAGA------GCAACGAGTGCCG....................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
................................................................................................................................................................................................................................TTTGTGGAAGATCCAAACAGC...............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTCGTTTACAGAATCCGCAGA------G................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................CAACTTTTAAA---------------------------------------------GAGCACTTTGTGGAAGA.........................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TC---T---ATT-----------------------------------T-TATTCGAAGTTTAAGTTAATGA--------------------------------------------------------------------.........................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................ATTCGAAGTTTAAGTTAATGA--------------------------------------------------------------------AGT......................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
...............................................................................................................................................................................................................................CTTTGTGGAAGATCCAAACAGCA--------------------------------------AA------------------CGC.................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAGA------GCAACGAGTGCCGT----------------C------------------------------C...2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAGA------GCAACGAGTGCCGT----------------C------------------------------T...2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................CAAACAGCA--------------------------------------AA------------------CGCGA----------------A-----------------A-----GG--------CCAAGTT-------------------A--G...............................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................AACTTTTAAA---------------------------------------------GAGCACTTTG................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
...........................................................................................................................................................................AA---------------------------------------------GAGCACTTTGTGGAAGATC.......................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................TTTGTGGAAGATCCAAACAGCA--------------------------------------A.......................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................CAAGTT-------------------A--GTGAC----C------CAAATTG.........................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
...............................................................T-TATTCGAAGTTTAAGTTAATGA--------------------------------------------------------------------AGTCA....................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................T-TATTCGAAGTTTAAGTTAATGA--------------------------------------------------------------------AGTC.....................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................AC----C------CAAATTGATAGACAA--A-TC--TC--CAA--TC..............................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................T-------------------A--GTGAC----C------CAAATTGATAGACAA--A-TC--TC--.....................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................ACTTTTAAA---------------------------------------------GAGCACTTTGT...............................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
........................................................................................................................................................................................................................................AGATCCAAACAGCA--------------------------------------AA------------------CGCGA----------------A-----------------A-----GG--------C............................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGCAGA------GCAACGAGTGCCGT----------------C------------------------------CCC.2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATCCGCAGA------GCAACGAGT........................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................ACAGCA--------------------------------------AA------------------CGCGA----------------A-----------------A-----GG--------CCA..........................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................TCCAAACAGCA--------------------------------------AA------------------CGCGA----------------A-----------------A-----GG--------CCAAGT.......................................................................................................................................................................2811.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................AACTTTTAAA---------------------------------------------GAGCACTTTGTGGAAGA.........................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................CTTTTAAA---------------------------------------------GAGCACTTTGTGGAAGA.........................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................AAA---------------------------------------------GAGCACTTTGTGGAAGAT........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................TTTAAA---------------------------------------------GAGCACTTTGTGGAAGATCCA.....................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................C--TC--CAA--TCTGCTCGTTTACAGAATCCGC..........................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................AA--A-TC--TC--CAA--TCTGCTCGTTTACAGAA...............................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................TTTGTGGAAGATCCAAACAGCA--------------------------------------AA------------------....................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................CGAAGTTTAAGTTAATGA--------------------------------------------------------------------AGT......................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................TTGTGGAAGATCCAAACAGCA--------------------------------------AA------------------CGCG................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
..........................................................................................................................................................................................................................GAGCACTTTGTGGAAGATCCA.....................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTACAGAATCCGCAGA------G................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................TATTCGAAGTTTAAGTTAATGA--------------------------------------------------------------------AGTC.....................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................TTTTAAA---------------------------------------------GAGCACTTTGTGGAAGA.........................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................AA---------------------------------------------GAGCACTTTGTGGAAGATT.......................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................A---------------------------------------------GAGCACTTTGTGGAAGATCC......................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............TTC---T---ATT-----------------------------------T-TATTCGAAGTTTAAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCCGCAGA------GCAACGAGTGCC.....................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGA------GCAACGAGTGCCGT----------------...................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................TTTTAAA---------------------------------------------GAGCACTTTGTG..............................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................A--------------------------------------AA------------------CGCGA----------------A-----------------A-----GG--------CCAAGTT-------------------...................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TGATAGACAA--A-TC--TC--CAA--TCTGCTCGT.......................................................................................2711.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCAGA------GCAACGAGTGCCGT----------------C------------------------------CCC.2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................TGTGGAAGATCCAAACAGCA--------------------------------------AA------------------CGCGA----------------...............................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................ACAGCA--------------------------------------AA------------------CGCGA----------------A-----------------A-----GG--------CC...........................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGAATCCGCAGA------GCAACGAGTGCCGT----------------...................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATCCGCAGA------GCAACGAGTGCCGT----------------C------------------------------....2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...........................................................................................................................................................................AA---------------------------------------------GAGCACTTTGTGGAAGA.........................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGCAGA------GCAACGAGTGCCGT----------------C------------------------------C...2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGAATCCGCAGA------GCAACGAGT........................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.....................................................................................................................................................................................................................................................A--------------------------------------AA------------------CGCGA----------------A-----------------A-----GG--------CCAAGT.......................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATCCGCAGA------GCAACGAG.........................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGAATCCGCAGA------GCAACGAGTGCCGT----------------A------------------------------....3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................GTCAGCCAACTTTTAAA---------------------------------------------GAGCACTT..................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................TAAA---------------------------------------------GAGCACTTTGTGGAAGATCCAAA...................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGA------GCAACGAGTGCCGT----------------C------------------------------....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..........................................................................................................................................................................................................................................ATCCAAACAGCA--------------------------------------AA------------------CGCGA----------------A-----------------A-----GG--------CCAAG........................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................TTTAAA---------------------------------------------GAGCACTTTGTGGAAG..........................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGAATCCGCAGA------GCAACGAGTGCC.....................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCAGA------GCAACGAGTGCCG....................................................2111.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................AAA---------------------------------------------GAGCACTTTGTGGAAGATCC......................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
....................................................................................................................................................................................................................................................CA--------------------------------------AA------------------CGCGA----------------A-----------------A-----GG--------CCAAGTT-------------------...................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................AGTTTAAGTTAATGA--------------------------------------------------------------------AGTCAGCCAA...............................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TAGACAA--A-TC--TC--CAA--TCTGCTCGTTTACA..................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGTTTACAGAATCCGCAGA------GCAACG...........................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................ATCCAAACAGCA--------------------------------------AA------------------CGCGA----------------A-----------------A-----GG--------CC...........................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................AATGA--------------------------------------------------------------------AGTCAGCCAACTTTTAAA---------------------------------------------GAGCAC....................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................TGTGGAAGATCCAAACAGC...............................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..................................................................................................................................................................................................................................TGTGGAAGATCCAAACAGCA--------------------------------------AA------------------CGCGA----------------A-----------------A-----.......................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGAATCCGCAGA------GCAACG...........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
droSim2
TATA---------CATTTTTTTTTTATT-----------------------------------T-TATTCGAAGTTTAAGTTAATGA--------------------------------------------------------------------AGTCAGCCAACTTTTAAA---------------------------------------------GAGCACTTTGTGGAAGATCCAAACAGCA--------------------------------------AA------------------CGCGA----------------A-----------------A-----GG--------CCAAGTT-------------------A--GCGAC----C------CAAATTGATAGACAA--A-TC--TC--CAA--TCTGCTCGTTTACAGAATCCGCAGA------GCAACGAGTGCCGG----------------C------------------------------ACCGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTACAGAATCCGCAGA------GCAACGAG.........................................................2512.00200000002000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................C--TC--CAA--TCTGCTCGTTTACAG.................................................................................2112.00220000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGAATCCGCAGA------GCAACGA..........................................................2111.00101000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTACAGAATCCGCAGA------GC...............................................................1911.00110000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGAATCCGCAGA------GCAACGAG.........................................................2311.00100000001000000000
..................................................................ATTCGAAGTTTAAGTTAATGA--------------------------------------------------------------------.........................................................................................................................................................................................................................................................................................................................................................................................2111.00100000100000000000
.........................................................................................................................................................................TAAA---------------------------------------------GAGCACTTTGTGGAAGATCCAAAC..................................................................................................................................................................................................................................................................................................2811.00100000000001000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGAATCCGCAGA------GCAACGAGTGC......................................................2611.00100000010000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................ACAA--A-TC--TC--CAA--TCTGCTCGT.......................................................................................2111.00110000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCAGA------GCAACGAGTGCC.....................................................1911.00110000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACAGAATCCGCAGA------GCAAC............................................................2111.00110000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGA------GCAACGAGTGCCGG----------------C------------------------------AC..2111.00110000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACAGAATCCGCAGA------GCAACGAG.........................................................2411.00100000010000000000
................................................................................................................................................................................................................................TTTGTGGAAGATCCAAACAGCA--------------------------------------AA------------------....................................................................................................................................................................................................................................2411.00100000000001000000
droSec2
ATTA-----------TTT---TTATATT-----------------------------------T-TATTCGAAGTTTAAGTTAATGA--------------------------------------------------------------------AGTCAGCCAACTTTTAAA---------------------------------------------GAGCACTTTGTGGAAGATCCAAACAGCA--------------------------------------AA------------------CGCGA----------------A-----------------A-----GG--------CCAAGTT-------------------A--GCGAC----C------CAAATTGATAGACAA--A-TC--TC--CAA--TCTGCTCGTTTACAGAATCCGCAGA------GCAACGAGTGCCGC----------------C------------------------------ACCGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................ACAA--A-TC--TC--CAA--TCTGCTCGT.......................................................................................2112.0020200
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTTACAGAATCCGCAGA------GC...............................................................2112.0021100
.......................................................................................................................................................................TTTAAA---------------------------------------------GAGCACTTTGTGGAAGA.........................................................................................................................................................................................................................................................................................................2311.0010100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGA------GCAACGAGTGCCGC----------------C------------------------------ACA.2211.0010001
..........................................................................................................................................................................AAA---------------------------------------------GAGCACTTTGTGGAAGAT........................................................................................................................................................................................................................................................................................................2111.0010100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGA------GCAACGAGTGCCGC----------------C------------------------------ACC.2111.0010100
........................................................................................................................................................................TTAAA---------------------------------------------GAGCACTTTGTGGAAG..........................................................................................................................................................................................................................................................................................................2111.0010100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACAGAATCCGCAGA------GCATT............................................................2111.0010100
...................................................................................................................................................................AACTTTTAAA---------------------------------------------GAGCACTTTGT...............................................................................................................................................................................................................................................................................................................2111.0010100
.................................................................................................................................................................................................................................................................................................................................................................................................................................AA--A-TC--TC--CAA--TCTGCTCGTT......................................................................................2011.0011000
..........................................................................................................................................................................................................................GAGCACTTTGTGGAAGATCCA.....................................................................................................................................................................................................................................................................................................2111.0010100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA------GCAACGAGTGCCGC----------------C------------------------------ACCG2111.0010001
................................................................................................................................................................................................................................................ACAGCA--------------------------------------AA------------------CGCGA----------------A-----------------A-----GG--------CCAAG........................................................................................................................................................................2211.0010001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGTTTACAGAATCCGCAG........................................................................2011.0011000
......................................................................................................................................................................TTTTAAA---------------------------------------------GAGCACTTTGTGG.............................................................................................................................................................................................................................................................................................................2011.0010100
.................................................................................TAATGA--------------------------------------------------------------------AGTCAGCCAACT.............................................................................................................................................................................................................................................................................................................................................................................1811.0010010
..........................................................................................................................................................................AAA---------------------------------------------GAGCACTTTGTGGAAG..........................................................................................................................................................................................................................................................................................................1911.0010100
droYak3
TCTC-----------TTTTTTTTTTATT-----------------------------------A-GAATCGAAGTTTAAGCTAATTAAGTTGTTGGAAAAAG---------------------------------------------------AAACTCAGCCAACTTTAAAAGCGCAA-----------------CAAACAAATAACA-T--GATGAAAACACTTTGTGGAAGAACCCAACGGCA--------------------------------------AA------------------CGCGA----------------T-----------------T-----AG--------CCAAGCT-------------------A--GCGAC----C------CAAATTGATAGACAA--C-TC--TC--CAA--TCTGCTCGTTTACAGAATCCGCAGA------GCAACGAGTGCCGC----------------C------------------------------CTTGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................................................................................................................................GGAAGAACCCAACGGCA--------------------------------------AA------------------CG..................................................................................................................................................................................................................................2111.00101000000000
...................................................................................ATTAAGTTGTTGGAAAAAG---------------------------------------------------AAACTCAGCC.................................................................................................................................................................................................................................................................................................................................................................................2921.00220000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................GACAA--C-TC--TC--CAA--TCTGCTCGT.......................................................................................2220.50101000000000
....................TTTTTATT-----------------------------------A-GAATCGAAGTTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.50101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGCAGA------GCAACGAGTGCCGC----------------...................................2320.50101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGCAGA------GCAACGAGTGCCGC----------------C------------------------------....2420.50100000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCAGA------GCAACGAGTGCCGC----------------C------------------------------CT..2520.50100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA------GCAACGAGTGCCGC----------------C------------------------------CTTG2120.50100001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTCGTTTACAGAATCCGC..........................................................................2120.50101000000000
...................................................................ATCGAAGTTTAAGCTAATTAAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.50100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................ATAGACAA--C-TC--TC--CAA--TCTGCTC.........................................................................................2320.50101000000000
..........................................................................................................................................................AACTCAGCCAACTTTAAAAGCGC...................................................................................................................................................................................................................................................................................................................................................................2320.50100000010000
droEre2
TCGA-----------A---------------------------------------------------------GTTTAAGTTAATTAAGTTGATGGAAAAAT---------------------------------------------------AAACTCAGCCAACTTTAAAACAGCAA-----------------CAAATGAACAGCA-T--GATGAAAACACTTTGTGGAAGATCCGAATAGCA--------------------------------------AA------------------CGCGA----------------A-----------------G-----AG--------CCAAGCC-------------------A--GCGAC----C------CAAATTGATAGACAA--C-TC--TC--CAA--TCTGCTCGTTTACAGAATCCGCAGA------CCAACGAGTGCCGC----------------C------------------------------CACGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TC--CAA--TCTGCTCGTTTACAGAATCCGC..........................................................................2712.0020000002
.............................................................................................................................................................................................................................................................................................A------------------CGCGA----------------A-----------------G-----AG--------CCAAGCC-------------------A--GCGAC----C------CAAA............................................................................................................................2811.0011000000
....................................................................................................................................................................................................CAAATGAACAGCA-T--GATGAAAACACT...................................................................................................................................................................................................................................................................................................................2611.0011000000
........................................................................................................................................................................TAAAACAGCAA-----------------CAAATGAACAGCA-T--GA.............................................................................................................................................................................................................................................................................................................................2711.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGAATCCGCAGA------CCAACGAGTGCCG....................................................2811.0011000000
......................................................................................................................................................................TTTAAAACAGCAA-----------------CAAATGAACAGCA-..................................................................................................................................................................................................................................................................................................................................2611.0011000000
.....................................................................................................................................................................................................................................................A--------------------------------------AA------------------CGCGA----------------A-----------------G-----AG--------CCAAGCC-------------------A--GC..............................................................................................................................................2211.0011000000
.....................................................................................................T---------------------------------------------------AAACTCAGCCAACTTTAAAACAGC...................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTCGTTTACAGAATCCG...........................................................................2011.0011000000
....................................................................................................................................................................................................................................................................................................................A----------------A-----------------G-----AG--------CCAAGCC-------------------A--GCGAC----C------CAAA............................................................................................................................2311.0010010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTCGTTTACAGAATCCGCAGA------CCAACA...........................................................2911.0011000000
................................................................................................................................................................................................................................................................................................................CGCGA----------------A-----------------G-----AG--------CCAAGCC-------------------A--GC..............................................................................................................................................1911.0011000000
...................................................................................................................................................................................................................................GTGGAAGATCCGAATAGC...............................................................................................................................................................................................................................................................................................1811.0010000100
......................................................................................................................................................................TTTAAAACAGCAA-----------------CAAATGAAC.......................................................................................................................................................................................................................................................................................................................................2211.0011000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................C--TC--CAA--TCTGCTCGTTTACAGA................................................................................2211.0010001000

Generated: 06/08/2015 at 04:27 PM