ID:

dpe_1592

 Coordinate:

scaffold_4:4135718-4135783 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dper\GL17534-cds]; exon [dper_GLEANR_19332:5]; CDS [Dper\GL17534-cds]; exon [dper_GLEANR_19332:4]; intron [Dper\GL17534-in]

No Repeatable elements found

Sense Strand Reads

##################################################------------------------------------------------------------------##################################################
GGTGGAGGAGATCGACATGTCCAAGGAGACACGTGACAGATTCCTGCTGGGTGAGTTCAACTTTCACAAAGAGGGGTTGCGTCTGACTTTACTTGTGCGTTATTTATCCATTCCAGAGAAATTCGGCTTGGACAACTCAGATGAGGAGGAGATCTTTATTGAGCGC
**************************************************((((((..(((...((((.((.((((((......)))))).)))))).))))))))).........************************************************** 		Read size # Mismatch Hit Count Total Norm Total M021
embryo
 V042
embryo
 M042
female body
 V057
head
.....................................................................................................................GAAATTCGGCTTGGACAACT............................. 20 0 1 2.00 2 2 0 0 0
..................GTCCAAGGAGACACGTGACAGATT............................................................................................................................ 24 0 1 1.00 1 0 0 1 0
.........GATCGACATGTCCAAGGAGA......................................................................................................................................... 20 0 1 1.00 1 0 0 1 0
...........................GACACGTGACAGATTCCTGCTGGAGA................................................................................................................. 26 3 1 1.00 1 0 1 0 0
.........GATCGACATGTCCAAGGA........................................................................................................................................... 18 0 1 1.00 1 0 0 1 0
................ATGTCCAAGGAGACACGTGAC................................................................................................................................. 21 0 1 1.00 1 0 0 1 0
....................................................................................................................AGAAATTCGGCTTGGACAACTCAGAT........................ 26 0 1 1.00 1 1 0 0 0
..........................AGACACGTGACAGATTCCTGCT...................................................................................................................... 22 0 1 1.00 1 0 1 0 0
........................................................................................................................ATTCGGCTTGGACAACTC............................ 18 0 1 1.00 1 1 0 0 0
...................................................................................................................................................GGAGATCTTTATTGAGCGC 19 0 1 1.00 1 0 1 0 0
.......................................................................................................................AATTCGGCTTGGACAACTCAGAT........................ 23 0 1 1.00 1 1 0 0 0
...........................................................................................................................................GATGAGGAGGAGATCTTTAT....... 20 0 1 1.00 1 0 1 0 0
..................................................................................................................................................AGGAGATCTTTATTGAGCGC 20 0 1 1.00 1 0 1 0 0
.....AGGAGGTCGGCATGTCCACGG............................................................................................................................................ 21 3 3 0.33 1 0 0 0 1
.............................................GATGGCTGAGTTCAACTTC...................................................................................................... 19 3 17 0.12 2 0 0 1 1

Anti-sense strand reads

CCACCTCCTCTAGCTGTACAGGTTCCTCTGTGCACTGTCTAAGGACGACCCACTCAAGTTGAAAGTGTTTCTCCCCAACGCAGACTGAAATGAACACGCAATAAATAGGTAAGGTCTCTTTAAGCCGAACCTGTTGAGTCTACTCCTCCTCTAGAAATAACTCGCG
**************************************************((((((..(((...((((.((.((((((......)))))).)))))).))))))))).........************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V057
head
..............................................TACCGACTCAAGTTGAAG...................................................................................................... 18 3 20 15.15 303 303 0
.............................................CTACCGACTCAAGTTGAAG...................................................................................................... 19 3 17 3.12 53 52 1
.............................................CTACCGACTCAAGTTGAA....................................................................................................... 18 2 3 1.67 5 5 0
.........................CTCTGTGCACTGTCTAAGGAC........................................................................................................................ 21 0 1 1.00 1 0 1
.............................................CTACCGACTCAAGTTGAAC...................................................................................................... 19 3 20 0.05 1 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_4:4135668-4135833 + dpe_1592 GGTGGAGGAGATCGACATGTCCAAGGAGACACGTGACAGATTCCTGCTGGGTGAGTTCAACT----TTCAC-----------AAAGAGGGGTTGCGTCTGACT--TTA--CT--------------------------------------------------T-------GTGC-GTTATTTA---TCCATTCCAGAGAAATTCGGCTTGGACAACTCAGATGAGG--------------------------------AGGAGATCTTTATTGAGCGC
dp5 3:14916111-14916276 - GGTGGAGGAGATCGACATGTCCAAGGAGACACGTGACAGATTCCTGCTGGGTGAGTTAAACT----TTCAC-----------AAAGAGGGGTTGCGTCTGACT--TAA--CT--------------------------------------------------T-------TTGC-GTTATTTA---TCCATTCCAGAGAAATTCGGCTTGGACAACTCAGATGAGG--------------------------------AGGAGATCTTTATTGAGCGC
droWil2 scf2_1100000004510:178543-178722 - AGTGGAGGAAATTGACTTGTCCAAGGAGACAACTAACAAGAAACTTCAAGGTGAGATAGATC----A-------------------------------------CT--C-------------AGA--ACTTACTTAAA----ACTTCA-----------CT-T-------AAA--CTTTTC-T---ATATTTTCAGATAAATTGCGTGACGACAGCGACGAAGAGGACTCTAGTGAGCA---GGAT--------GAAGAGGAGATTATCATTGAACGT
droVir3 scaffold_12875:19202114-19202274 + GGTTGAGGAGGTGGACATTTCTAAGGAAACCAACGAAACCTTTATGCTAGGTTTGTAACTTT-----TCCT--ATCCTTTTC-----CGATTT-------------------------------------------------T-----TGTC-------TCTA--ATTATA---TCTGAAT-A---TTTATTATAGACAAACTCGGCATTGACAGCGATGAGGAGG-----------------------------------AGATCATCATTGAGCGT
droMoj3 scaffold_6496:12895683-12895854 + GGTCGAGGAAGTGGATGTGTCCAAGGAGACCAAGGACAAATTCTTGATTGGTAAGTCGGA----GATTTGCATCTACTCTTA-----TCATAG---------------CAGTT--CC------TA-----------------A---------------------------------TGCAT-T---GCAATTGCAGATAAATTCGGCCTCGACAGCGACGA------GTTGAATA------GCGAC--------GAGGAGGAGATCATTATTGAGCGC
droGri2 scaffold_15245:13245190-13245371 + AGTGGAGGAAGTTGATATGACCAAGGAGACCGAAGACAAATTCCTGCTAGGTACGTGATAAA----TGCAT--------------------------ATGC--TAA--ATAT-------TATGGATAATCT----------------T-----------TTTA-------ATCGTTTCCTT-CAATCCTTTTACAGGCAAACTTGGCATTGACAGCGACGA------ATTGAACA------GTGAC--------GAGGAGGAGATCATTATTGAGCGT
droAna3 scaffold_13266:7541501-7541679 - GGCCGAAGAGGTGGACATGTCTGAGGAGACACGAGACAAGTTCCTTCTGGGTGAGTTCAAAT----GCCA--------------------------------------TACT-------TATCG------------AAAATTA-----TGTAT------TC-T-------ATGCCATATTT-T---GT-CCAACAGAGAAACTTGGCATCGACACCGACGC------CTCCAGCGATGAGAACGAC--------GAGGAGGAGATCTTCATCGAGCGC
droBip1 scf7180000396384:350407-350582 - GGCCGAGGAGGTGGAACTCTCTGAGGAGACGAAAGAAAAGTTCCTTCTGGGTGAGTTTAGAT----CTCAT---------------------------------------GTC------TATCG------------AAGATTA-----GGTA-------TTTA-------ATGGTATACTT-T---GT-CCAACAGAGAAACTTGGCCTCGACAGTGACGC------GTCCAGCGATGA---GAGC--------GACGAGGAGATCTTTATCGAGCGC
droKik1 scf7180000302476:1849281-1849453 - GGCGGAGGAGGTGGACCTGTCCCACGAGACACGCGATAAGTTCCTACTGGGTGAGTTTTATT----TTC---------------------------------------TAATT--T--------------------------A-----TGTATTCCTAAACTCACAA----T----ACCTC-T---GCTGTTCCAGAGAAACTCGGCTTCGAGAGCGA------CGAATCGGACGACA---GCAAT--------GACGAGGAGATCTTCATTGAGCGC
droFic1 scf7180000454066:2120341-2120502 + GGTTGAGGAGGTGGAGATGTCCAAGGAGCCGCGCGATAAGTTCCTGTTGGGTAAGTATTTCT-------------------------------------------A--TAGTT--CCTTAAAGAA-----------------ACTTC--CTT-------ACTA-------ATACTGCGGTT-T---ATCCTTCCAGATAAATTCGGTTTCGACAGCGACAGCGAGGAGTTGGATTCGGA---GG--A---------------------------GTAC
droEle1 scf7180000491282:58526-58582 - GGCGGAGGAAGTGGACTTGTCCCAGGAGACGCGCGACGAGTTCCTCTTGGGTGAGTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000778226:12038-12211 - GGCGGAGGAGGTGGATATGTCCGAGGAGACGAACGACAGGTTCCTGTTGGGTGAGTTTTCCT----TTAA-----------------GGATTTAGGCCT-------------AGGAAA---------------TTGTA----AG---------------ACTAACAG--AATCTTA--TCCTA---TCCACTCCAGATAAACTTGGCTTTGTCAGCGAAAGCGGGGAATCGGATG-----------A------------------GTTCACTGAGAAG
droBia1 scf7180000302143:2493433-2493605 - AGCGGAGGAGGTGGACATGTCCGAGGAGACGCGCGATAGGTTCCTGCTGGGTAAGTAAAACT----C-------------------------------------------------G--TTTTG------------AAAATAA-----AGAGC------TC-A-------TAACAATATTT-TGA-ACCTCTTCAGACAAACTGGGCTTCGACAGCGAAAGCGAGGAGTCGGATG-----------AGTACACCGAGAAGATGATCTTC------CAC
droTak1 scf7180000415739:71722-71880 + GGCGGAGGAGGTGGACATGTCCCAGGAGACACGGGATCGCTTCCTGCTGGGTGAGTTATCTTGAGC-------------------------------------TAG--CTTTG--GGTGGA-----------TTTGAA----AAATAT-----------AT-C-------ATC--ATATTT-T---ATCCCTTTAGACAAACTGGGCTTCGACAGCGAAAGCGAGGAGTCCGATG-----------A---------------------------ATAC
droEug1 scf7180000409672:6119177-6119348 + GGCGGAGGATGTGGACATGTCCGAGGAGACGCGCGATAGGTTCCTGCTAGGTAAGTTATACA----CTGAC-----------------------------------------T--TGA---------------TTGAA----AGATGAAAT-----------A-------ATC-TATGCTT-T---CCCACTTCAGAGAAACTCGGCTTCGACAGCGAAAGCGAGGAATCAGATG-----------AGTACACTGAGAAGATGATCTTC------CAC
dm3 chr2R:18215586-18215741 + GGCGGAGGAAGTGGACATGTCTCAGGAGACCCGTGATAAATTCCTTCTGGGTAAGTTTTA----GC-------------------------------------CAA--TCATT--CGTTGATGGA-----------------ATGTAT-----------TCCA-------ATCGTATGTTT-T---ACCTTCTCAGAGAAACTGGGCTTCGACAGCGAAAGCGAGGAGTCAGATG-----------A---------------------------GTAC
droSim2 2r:18753160-18753315 + CGCGGAGGAAGTAGACATGTCTCAGGAGAAACGTGATAAATTCCTGCTGGGTAAGTTTCA----GC-------------------------------------CAA--TAATT--CTTTGATGGA-----------------ATGTAT-----------ACCA-------ATCGTATGTTT-T---ACCTCCTCAGAGAAACTGGGCTTCGACAGCGAAAGCGAGGAGTCGGATG-----------A---------------------------GTAC
droSec2 scaffold_9:1525912-1526067 + CGCGGAGGAAGTAGACATGTCTCAGGAGAAACGTGATAAATTCCTGCTGGGTAAGTTTTA----GC-------------------------------------CAA--TAATT--CGTTTATGGA-----------------ATGTAT-----------ACTA-------ATCGTATAGTT-T---ATCTCCTCAGAGAAACTGGGCTTCGACAGCGAAAGCGAGGAGTCGGATG-----------A---------------------------GTAC
droYak3 2R:17966886-17967041 + GGCGGAGGAAGTGGACATGTCTCAGGAGACTCGTGATAAGTTCCTGCTTGGTAAGTTTGA----GA-------------------------------------AAA--TTATT--CGTTTATGGA-----------------ATGTAT-----------TCCA-------ATCATATGTTC-T---ACCTCTTCAGAGAAACTGGGCTTCGACAGCGGCAGCGAGGAGTCGGATG-----------A---------------------------GTAC
droEre2 scaffold_4845:12355525-12355676 + GGCTGAGGAAGTGGACATTTCTCAGGAGACTCGTGATAAGTTCCTGCTTGGTAAGTGTCA----GC-------------------------------------CAA--TTATT--CGCTTATAGA-----------------ACATAT-----------TACA-------ATCGTAGCATA-T---ACCTTTTCAGAGAAACTGGGCTTCGACAACGCAAGCGAGGAGTCGGATG-----------A-------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
GGTGGAGGAGATCGACATGTCCAAGGAGACACGTGACAGATTCCTGCTGGGTGAGTTCAACT----TTCAC-----------AAAGAGGGGTTGCGTCTGACT--TTA--CT--------------------------------------------------T-------GTGC-GTTATTTA---TCCATTCCAGAGAAATTCGGCTTGGACAACTCAGATGAGG--------------------------------AGGAGATCTTTATTGAGCGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................................................................................................................................................................................................GAAATTCGGCTTGGACAACT.............................................................2012.002200000
..................GTCCAAGGAGACACGTGACAGATT............................................................................................................................................................................................................................................2411.001010000
.........GATCGACATGTCCAAGGAGA.........................................................................................................................................................................................................................................................2011.001010000
...........................GACACGTGACAGATTCCTGCTGGAGA.................................................................................................................................................................................................................................2611.001001000
.........GATCGACATGTCCAAGGA...........................................................................................................................................................................................................................................................1811.001010000
................ATGTCCAAGGAGACACGTGAC.................................................................................................................................................................................................................................................2111.001010000
....................................................................................................................................................................................................AGAAATTCGGCTTGGACAACTCAGAT........................................................2611.001100000
..........................AGACACGTGACAGATTCCTGCT......................................................................................................................................................................................................................................2211.001001000
........................................................................................................................................................................................................ATTCGGCTTGGACAACTC............................................................1811.001100000
...................................................................................................................................................................................................................................................................GGAGATCTTTATTGAGCGC1911.001001000
.......................................................................................................................................................................................................AATTCGGCTTGGACAACTCAGAT........................................................2311.001100000
...........................................................................................................................................................................................................................GATGAGG--------------------------------AGGAGATCTTTAT.......2011.001001000
..................................................................................................................................................................................................................................................................AGGAGATCTTTATTGAGCGC2011.001001000
dp5
GGTGGAGGAGATCGACATGTCCAAGGAGACACGTGACAGATTCCTGCTGGGTGAGTTAAACT----TTCAC-----------AAAGAGGGGTTGCGTCTGACT--TAA--CT--------------------------------------------------T-------TTGC-GTTATTTA---TCCATTCCAGAGAAATTCGGCTTGGACAACTCAGATGAGG--------------------------------AGGAGATCTTTATTGAGCGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................GTCCAAGGAGACACGTGACA................................................................................................................................................................................................................................................2013.0030300000000
.........GATCGACATGTCCAAGGAGA.........................................................................................................................................................................................................................................................2013.0030300000000
.................................................................................................................................................................................................................................G--------------------------------AGGAGATCTTTATTGAGCGC2112.0020200000000
.................................................................................................................................................................................................................GGACAACTCAGATGAGG--------------------------------AGGAGAT.............2412.0020000002000
.......GAGATCGACATGTCCAAGGAG..........................................................................................................................................................................................................................................................2112.0020200000000
GGTGGAGGAGATCGACATGTC.................................................................................................................................................................................................................................................................2112.0020000002000
.........GATCGACATGTCCAAGGA...........................................................................................................................................................................................................................................................1811.0010100000000
..............................................................................................................................................................................................................CTTGGACAACTCAGATGAGG--------------------------------AGGA................2411.0010100000000
.................................................................................................................................................................................................................GGACAACTCAGATGAGG--------------------------------AGGAG...............2211.0010100000000
................................................................................................................................................................................................................TGGACAACTCAGATGAGG--------------------------------AG..................2011.0010010000000
........................................................................................................................................................................................................................TCAGATGAGG--------------------------------AGGAGATC............1811.0010000010000
.....................................................................................................................................................................................................GAAATTCGGCTTGGACAACTCAGATGA......................................................2711.0010100000000
.........GATCGACATGTCCAAGGAGACAC......................................................................................................................................................................................................................................................2311.0010001000000
...................TCCAAGGAGACACGTGACAGA..............................................................................................................................................................................................................................................2111.0010100000000
.............GACATGTCCAAGGAGACACGTGACA................................................................................................................................................................................................................................................2511.0010100000000
...............................................................................................................................................................................................................TTGGACAACTCAGATGAGG--------------------------------AGGAG...............2411.0010100000000
.....AGGAGATCGACATGTCCAAGGAGA.........................................................................................................................................................................................................................................................2411.0010100000000
....................................................................................................................................................................................................................CAACTCAGATGAGG--------------------------------AGGAGAT.............2111.0010100000000
.........................................................................................................................................................................................................................CAGATGAGG--------------------------------AGGAGATCTTTATT......2311.0010000001000
...............................................................................................................................................................................................................TTGGACAACTCAGATGAGG--------------------------------AGGAGA..............2511.0010100000000
...............CATGTCCAAGGAGACACGTGAC.................................................................................................................................................................................................................................................2211.0010100000000
.........GATCGACATGTCCAAGGAGACACG.....................................................................................................................................................................................................................................................2411.0010100000000
.................................................................................................................................................................................................................GGACAACTCAGATGAGG--------------------------------AGGA................2111.0010100000000
................................................................................................................................................................................................................TGGACAACTCAGATGAGG--------------------------------AGGAG...............2311.0010010000000
........AGATCGACATGTCCAAGGAGA.........................................................................................................................................................................................................................................................2111.0010100000000
................................................................................................................................................................................................................................GG--------------------------------AGGAGATCTTTATTGAGC..2011.0010100000000
...........................GACACGTGACAGATTCCTG........................................................................................................................................................................................................................................1911.0010100000000
..........................AGACACGTGACAGATTCCTG........................................................................................................................................................................................................................................2011.0010100000000
.....................CAAGGAGACACGTGACAGATTC...........................................................................................................................................................................................................................................2211.0010100000000
.................TGTCCAAGGAGACACGTGACAG...............................................................................................................................................................................................................................................2211.0010100000000
............CGACATGTCCAAGGAGACAC......................................................................................................................................................................................................................................................2011.0010100000000
...........................................................................................................................................................................................................................GATGAGG--------------------------------AGGAGATCTTTATT......2111.0010000001000
......GGAGATCGACATGTCCAAGGA...........................................................................................................................................................................................................................................................2111.0010100000000
..TGGAGGAGATCGACATGTCCA...............................................................................................................................................................................................................................................................2111.0010100000000
........................................................................................................................................................................................................ATTCGGCTTGGACAACTCAGAT........................................................2211.0010100000000
...............................................................................................................................................................................................................TTGGACAACTCAGATGAGG--------------------------------AGGA................2311.0010100000000
..................GTCCAAGGAGACACGTGACAGATTCCTG........................................................................................................................................................................................................................................2811.0010100000000
...................................................................................................................................................................................................................................................................GGAGATCTTTATTGAGCG.1811.0010100000000
.......................................................................................................................................................................................................AATTCGGCTTGGACAACTCAG..........................................................2111.0010100000000
............................................................................................................................................................................................................GGCTTGGACAACTCAGATGAGG--------------------------------AGGA................2611.0010100000000
droWil2
AGTGGAGGAAATTGACTTGTCCAAGGAGACAACTAACAAGAAACTTCAAGGTGAGATAGATC----A-------------------------------------CT--C-------------AGA--ACTTACTTAAA----ACTTCA-----------CT-T-------AAA--CTTTTC-T---ATATTTTCAGATAAATTGCGTGACGACAGCGACGAAGAGGACTCTAGTGAGCA---GGAT--------GAAGAGGAGATTATCATTGAACGTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................................................................................................................................................CTCTAGTGAGCA---GGAT--------GAAGAGGA................24116.0016001420
.....................................................................................................................................................................................................................................CTAGTGAGCA---GGAT--------GAAGAGGA................2219.00900810
.....................................................................................................................................................................................................................AGCGACGAAGAGGACTCTAGT............................................2113.00300300
...................................................................................................................................................................................................GATAAATTGCGTGACGAC.................................................................1813.00330000
.....................................................................................................................................................................................................................................CTAGTGAGCA---GGAT--------GAAGA...................1913.00300120
..................................................................................................................................................................................................................GACAGCGACGAAGAGGACTCTAGTGA..........................................2613.00300300
...............................................................................................................................................................................................................GACGACAGCGACGAAGAGGA...................................................2012.00200200
........................................................................................................................................................................................................................GACGAAGAGGACTCTAGT............................................1812.00210010
......................................................................................................................................................................................................AAATTGCGTGACGACAGCGAC...........................................................2112.00200200
........................................................................................................................................................................................................................................GTGAGCA---GGAT--------GAAGAGGA................1912.00200200
......................................................................................................................................................................................................................GCGACGAAGAGGACTCTAGTGAGCA---....................................2512.00200200
.......................................................................................................................................................................................................................CGACGAAGAGGACTCTAGT............................................1912.00200110
................................................................................................................................................................................................................................GGACTCTAGTGAGCA---GGAT--------GAAGAGGA................2712.00200200
.......................................................................................................................................................................................................................CGACGAAGAGGACTCTAGTGA..........................................2112.00220000
........................................................................................................................................................................................................................GACGAAGAGGACTCTAGTGAGCA---....................................2312.00200110
......................................................................................................................................................................................................................GCGACGAAGAGGACTCTAGTGA..........................................2212.00220000
......................................................................................................................................................................................................................GCGACGAAGAGGACTCTAGT............................................2012.00200200
.................................................................................................................................................................................................................................GACTCTAGTGAGCA---GGAT--------GAAGAGGA................2612.00200110
...........TTGACTTGTCCAAGGAGAC........................................................................................................................................................................................................................................................1911.00100010
..............................................................................................................................................................................................................................GAGGACTCTAGTGAGCA---GGAT--------GAA.....................2411.00100100
.....................CAAGGAGACAACTAACAAGA.............................................................................................................................................................................................................................................2011.00100010
...............................................................................................................................................................................................................GACGACAGCGACGAAGAG.....................................................1811.00101000
...............................................................................................................................................................................................................GACGACAGCGACGAAGAGG....................................................1911.00100100
..........................................................................................................................................................................................................................CGAAGAGGACTCTAGTGA..........................................1811.00110000
.......................................................................................................................................................................................................................................AGTGAGCA---GGAT--------GAAGAGGA................2011.00100010
........................................................................................................................................................................................................................................GTGAGCA---GGAT--------GAAGAGG.................1811.00100100
.................................................................................................................................................................................................................................GACTCTAGTGAGCA---GGAT--------G.......................1911.00100100
..........................................................................................................................................................................................................................CGAAGAGGACTCTAGTGAGCA---....................................2111.00100010
...............................................................................................................................................................................................................GACGACAGCGACGAAGAGGACT.................................................2211.00100100
....................CCAAGGAGACAACTAACAAGAAAC..........................................................................................................................................................................................................................................2411.00100100
...........................................................................................................................................................................................................................GAAGAGGACTCTAGTGAGCA---GGAT--------GAA.....................2711.00101000
..........................................................................................................................................................................................................................CGAAGAGGACTCTAGTGAGCA---GGAT--------........................2511.00100100
..............................................................................................................................................................................................................................................A---GGAT--------GAAGAGGAGATTATCATT......2311.00100100
.....................CAAGGAGACAACTAACAAGAAA...........................................................................................................................................................................................................................................2211.00100100
.................................................................................................................................................................................................................................GACTCTAGTGAGCA---GGAT--------GAAGAG..................2411.00100100
......................................................................................................................................................................................................AAATTGCGTGACGACAGCGACGAAGA......................................................2611.00100100
...........................................................................................................................................................................................................GCGTGACGACAGCGACGAAGA......................................................2111.00100001
..........................................................................................................................................................................................................................................GAGCA---GGAT--------GAAGAGGAGAT.............2011.00100100
....................................................................................................................................................................................................................CAGCGACGAAGAGGACTCTAGT............................................2211.00100010
..................................................................................................................................................................................................................GACAGCGACGAAGAGGACTCTAGT............................................2411.00100100
..........................................................................................................................................................................................................TGCGTGACGACAGCGACGAAGA......................................................2211.00100100
.....................................................................................................................................................................................................................................CTAGTGAGCA---GGAT--------GAAGAGGAGA..............2411.00100100
...........................................................................................................................................................................................................GCGTGACGACAGCGACGAAGAGGA...................................................2411.00100100
...............................................................................................................................................................................................................GACGACAGCGACGAAGAGGACTCTA..............................................2511.00100100
.......................................................................................................................................................................................................AATTGCGTGACGACAGCGACGAAGAG.....................................................2611.00100010
........................................................................................................................................................................................................ATTGCGTGACGACAGCGACGAAG.......................................................2311.00100010
.....................................................................................................................................................................................................................................CTAGTGAGCA---GGAT--------GAAGAGGAG...............2311.00100010
..................................................................................................................................................................................................................GACAGCGACGAAGAGGACTCT...............................................2111.00100100
...................................................................................................................................................................................................................................CTCTAGTGAGCA---GGAT--------GA......................1811.00100100
........................................................................................................................................................................................................ATTGCGTGACGACAGCGACGAAGAG.....................................................2511.00100100
........................................................................................................................................................................................................................GACGAAGAGGACTCTAGTGAGC........................................2211.00100010
...........................................................................................................................................................................................................................GAAGAGGACTCTAGTGAGCA---....................................2011.00100100
...............................................................................................................................................................................................................GACGACAGCGACGAAGAGGACTCTAGT............................................2711.00100100
.....................................................................................................................................................................................................................................CTAGTGAGCA---GGAT--------GAAGAGGAGATT............2611.00100100
....................CCAAGGAGACAACTAACAAGAAACTT........................................................................................................................................................................................................................................2611.00100010
..........................................................................................................................................................................................................................CGAAGAGGACTCTAGTGAGCA---GG..................................2311.00100100
.................................................................................................................................................................................................................................GACTCTAGTGAGCA---GGAT--------GAAGAGG.................2511.00100100
....................CCAAGGAGACAACTAACAAGA.............................................................................................................................................................................................................................................2111.00100100
.............................................................................................................................................................................................................GTGACGACAGCGACGAAGA......................................................1911.00100100
..................GTCCAAGGAGACAACTAACAAGAAACT.........................................................................................................................................................................................................................................2711.00101000
..................................................................................................................................................................................................................................ACTCTAGTGAGCA---GGAT--------GAAGAGGA................2511.00100100
............................................................................................................................................................................................................................................GCA---GGAT--------GAAGAGGAGATTAT..........2111.00100100
...................................................................................................................................................................................................................................CTCTAGTGAGCA---GGAT--------GAAGA...................2111.00100100
..................................................................................................................................................................................................AGATAAATTGCGTGACGACAG...............................................................2111.00100010
....................CCAAGGAGACAACTAACAAGAAA...........................................................................................................................................................................................................................................2311.00100010
.................................................................................................................................................................................................................................GACTCTAGTGAGCA---GGAT--------........................1811.00110000
.............................................................................................................................................................................................................GTGACGACAGCGACGAAGAGGG...................................................2211.00100100
....................................................................................................................................................................................................................................TCTAGTGAGCA---GGAT--------GAAG....................1911.00100010
.....................................................................................................................................................................................................................................CTAGTGAGCA---GGAT--------GAAGAG..................2011.00100100
...................................................................................................................................................................................................................................................GAT--------GAAGAGGAGATTATC.........1811.00100010
............................................................................................................................................................................................................................................GCA---GGAT--------GAAGAGGAGATT............1911.00100010
..............................................................................................................................................................................................................................GAGGACTCTAGTGAGCA---GGAT--------........................2111.00100010
..............................................................................................................................................................................................................................GAGGACTCTAGTGAGCA---GGAT--------GAAG....................2511.00100100
.............................................................................................................................................................................................................GTGACGACAGCGACGAAGAGGA...................................................2211.00100100
droVir3
GGTTGAGGAGGTGGACATTTCTAAGGAAACCAACGAAACCTTTATGCTAGGTTTGTAACTTT-----TCCT--ATCCTTTTC-----CGATTT-------------------------------------------------T-----TGTC-------TCTA--ATTATA---TCTGAAT-A---TTTATTATAGACAAACTCGGCATTGACAGCGATGAGGAGG-----------------------------------AGATCATCATTGAGCGTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................................................................................................................................................................TGACAGCGATGAGGAGG-----------------------------------AGATCATC.........2515.005000100002000000000000000011000000000000000000000000000000000000
.GTTGAGGAGGTGGACATTTCT................................................................................................................................................................................................................................................................2114.004000000000000000000000000000000000000000000000000000000000000004
.................................................................................................................................................................................................................TGACAGCGATGAGGAGG-----------------------------------AGATCATCA........2612.002000000001000000000000000010000000000000000000000000000000000000
.................TTTCTAAGGAAACCAACGAA.................................................................................................................................................................................................................................................2012.002000000000000000000000000000002000000000000000000000000000000000
..TTGAGGAGGTGGACATTTCT................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................GGCATTGACAGCGATGAGGA......................................................2011.001000000000000000001000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................AGCGATGAGGAGG-----------------------------------AGATC............1811.001000000000000000000000000000000000000000000000000000000000001000
.GTTGAGGAGGTGGACATTTCC................................................................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................AGCGATGAGGAGG-----------------------------------AGATCATCATT......2411.001000000000000000100000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................TCGGCATTGACAGCGATGAGGAGG-----------------------------------AGA..............2711.001000000000000000000000000010000000000000000000000000000000000000
..................................................................................................................................................................................................................GACAGCGATGAGGAGG-----------------------------------AGAT.............2011.001000000000000000010000000000000000000000000000000000000000000000
...TGAGGAGGTGGACATTTCTAAGGAAA.........................................................................................................................................................................................................................................................2611.001000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................TTGACAGCGATGAGGAGG-----------------------------------AGATCAT..........2511.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................TTGACAGCGATGAGGAGG-----------------------------------.................1811.001000000100000000000000000000000000000000000000000000000000000000
.........................GAAACCAACGAAACCTTTA..........................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................AAACTCGGCATTGACAGCGATG..........................................................2211.001000000000100000000000000000000000000000000000000000000000000000
...........................AACCAACGAAACCTTTATGCTAGAC..................................................................................................................................................................................................................................2511.001000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................GACAGCGATGAGGAGG-----------------------------------AGATCA...........2211.001000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................ATTGACAGCGATGAGGAGG-----------------------------------AG...............2111.001000000010000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................CAAACTCGGCATTGACAGC..............................................................1911.001000000000000000000000000000000000000000000000000000000000001000
...............................................................................................................................................................................................................ATTGACAGCGATGAGGAG.....................................................1811.001000000010000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................GACAGCGATGAGGAGG-----------------------------------AGATC............2111.001000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................AGCGATGAGGAGG-----------------------------------AGATCAT..........2011.001000000000000001000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................TGACAGCGATGAGGAGG-----------------------------------AGATCATCAT.......2711.001000000000000000000000000001000000000000000000000000000000000000
..TTGAGGAGGTGGACATTTCTAAGGAAAC........................................................................................................................................................................................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................AGCGATGAGGAGG-----------------------------------AGATCATCA........2211.001000000000100000000000000000000000000000000000000000000000000000
.GTTGAGGAGGTGGACATTT..................................................................................................................................................................................................................................................................1911.001000000000000000000001000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................AGCGATGAGGAGG-----------------------------------AGATCATCATTGAG...2711.001000000000000000000000000000000000000000000000000000000000000010
................ATTTCTAAGGAAACCAACGAA.................................................................................................................................................................................................................................................2111.001000000000000000000000000000000100000000000000000000000000000000
............................................................................................................................................................................................................................AGGAGG-----------------------------------AGATCATCATTG.....1811.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................TGACAGCGATGAGGAGG-----------------------------------AGAT.............2111.001000000000000000000000000001000000000000000000000000000000000000
droMoj3
GGTCGAGGAAGTGGATGTGTCCAAGGAGACCAAGGACAAATTCTTGATTGGTAAGTCGGA----GATTTGCATCTACTCTTA-----TCATAG---------------CAGTT--CC------TA-----------------A---------------------------------TGCAT-T---GCAATTGCAGATAAATTCGGCCTCGACAGCGACGA------GTTGAATA------GCGAC--------GAGGAGGAGATCATTATTGAGCGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................................................................................................................................................................................................................GTTGAATA------GCGAC--------GAGGAGGA................2112.002200000
...................................................................................................................................................................................................................................GTTGAATA------GCGAC--------GAGGA...................1811.001100000
......................................................................................................................................................................................................................................GAATA------GCGAC--------GAGGAGGAG...............1911.001100000
......................................................................................................................................................................................................................................GAATA------GCGAC--------GAGGAGGA................1811.001100000
.....................................................................................................................................................................................................................................TGAATA------GCGAC--------GAGGAGGA................1911.001000001
............GGATGTGTCCAAGGAGACCAAGGAC.................................................................................................................................................................................................................................................2511.001000010
..................................................................................................................................................................................................................GACAGCGACGA------GTTGAATA------GC...................................2111.001100000
................GTGTCCAAGGAGACCAAGGAC.................................................................................................................................................................................................................................................2111.001100000
................GTGTCCAAGGAGACCAAGGA..................................................................................................................................................................................................................................................2011.001100000
.................................................................................................................................................................................................................CGACAGCGACGA------GTTGAATA------GC...................................2211.001000001
............GGATGTGTCCAAGGAGACCAAG....................................................................................................................................................................................................................................................2211.001100000
............GGATGTGTCCAAGGAGACCAAGGA..................................................................................................................................................................................................................................................2411.001100000
....................CCAAGGAGACCAAGGACAAATTCTTG........................................................................................................................................................................................................................................2611.001100000
GGTCGAGGAAGTGGATGTGT..................................................................................................................................................................................................................................................................2011.001000001
GGTCGAGGAAGTGGATGT....................................................................................................................................................................................................................................................................1811.001000001
....................CCAAGGAGACCAAGGACAAATTCTTGA.......................................................................................................................................................................................................................................2711.001100000
....................CCAAGGAGACCAAGGACAAATTCTT.........................................................................................................................................................................................................................................2511.001100000
..........GTGGATGTGTCCAAGGAGACCAAGGA..................................................................................................................................................................................................................................................2611.001000001
.GTCGAGGAAGTGGATGTGTCCAAGGA...........................................................................................................................................................................................................................................................2611.001100000
...................................................................................................................................................................................................................................GTTGAATA------GCGAC--------GAGGAGGAGAT.............2411.001000001
droGri2
AGTGGAGGAAGTTGATATGACCAAGGAGACCGAAGACAAATTCCTGCTAGGTACGTGATAAA----TGCAT--------------------------ATGC--TAA--ATAT-------TATGGATAATCT----------------T-----------TTTA-------ATCGTTTCCTT-CAATCCTTTTACAGGCAAACTTGGCATTGACAGCGACGA------ATTGAACA------GTGAC--------GAGGAGGAGATCATTATTGAGCGTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
........................................................................................................................................................................................................ACTTGGCATTGACAGCGACGA------ATTG...............................................2511.00101
................ATGACCAAGGAGACCGAA....................................................................................................................................................................................................................................................1811.00110
..........GTTGATATGACCAAGGAGACC.......................................................................................................................................................................................................................................................2111.00101
.GTGGAGGAAGTTGATATGACC................................................................................................................................................................................................................................................................2111.00110
...........TTGATATGACCAAGGAGACCGAAGAC.................................................................................................................................................................................................................................................2611.00110
.............GATATGACCAAGGAGACCGAAGACA................................................................................................................................................................................................................................................2511.00101
droAna3
GGCCGAAGAGGTGGACATGTCTGAGGAGACACGAGACAAGTTCCTTCTGGGTGAGTTCAAAT----GCCA--------------------------------------TACT-------TATCG------------AAAATTA-----TGTAT------TC-T-------ATGCCATATTT-T---GT-CCAACAGAGAAACTTGGCATCGACACCGACGC------CTCCAGCGATGAGAACGAC--------GAGGAGGAGATCTTCATCGAGCGCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...CGAAGAGGTGGACATGTCTGAGGAGA.........................................................................................................................................................................................................................................................2612.002200000
....................CTGAGGAGACACGAGACAAGTTC...........................................................................................................................................................................................................................................2312.002010001
..................GTCTGAGGAGACACGAGA..................................................................................................................................................................................................................................................1812.002020000
...............................................................................................................................................................................................................................................GAACGAC--------GAGGAGGAGATCTTC.........2212.002020000
...CGAAGAGGTGGACATGTCTGAGGA...........................................................................................................................................................................................................................................................2412.002000020
...............................................................................................................................................................................................................ATCGACACCGACGC------CTCCAGCGATGA.......................................2612.002110000
.............................CACGAGACAAGTTCCTTCTGGAGA.................................................................................................................................................................................................................................2411.001010000
........................................................................................................................................................................................................ACTTGGCATCGACACCGACGC------C..................................................2211.001000001
...................................................................................................................................................................................................GAGAAACTTGGCATCGACACC..............................................................2111.001001000
.....................................................................................................................................................................................................GAAACTTGGCATCGACACCGAC...........................................................2211.001010000
....................................................................................................................................................................................................................................TCCAGCGATGAGAACGAC--------GAGG....................2211.001000010
..........GTGGACATGTCTGAGGAGA.........................................................................................................................................................................................................................................................1911.001010000
.....AAGAGGTGGACATGTCTGAGGA...........................................................................................................................................................................................................................................................2211.001000010
....GAAGAGGTGGACATGTCTGAGGA...........................................................................................................................................................................................................................................................2311.001000010
.......................................................................................................................................................................................................................................AGCGATGAGAACGAC--------GAGGAG..................2111.001010000
....................................................................................................................................................................................................................................................................GAGATCTTCATCGAGCGC1811.001010000
..........................................................................................................................................................................................................................................GATGAGAACGAC--------GAGGAGGAGATCTTC.........2711.001000010
....................................................................................................................................................................................................................CACCGACGC------CTCCAGCGATGAGAAC...................................2511.001010000
.....AAGAGGTGGACATGTCTGAGGAGA.........................................................................................................................................................................................................................................................2411.001100000
..................................................................................................................................................................................................................................................................AGGAGATCTTCATCGAGCGC2011.001010000
...CGAAGAGGTGGACATGTCT................................................................................................................................................................................................................................................................1911.001000010
...............................................................................................................................................................................................................................................GAACGAC--------GAGGAGGAGATCTTCAT.......2411.001000010
..............................................................................................................................................................................................................................................................GAGGAGGAGATCTTCATCGAGCGC2411.001010000
...............................................................................................................................................................................................................ATCGACACCGACGC------CTCCAGCG...........................................2211.001100000
.................................................................................................................................................................................................................................................ACGAC--------GAGGAGGAGATCTTCATCG.....2411.001000010
..................GTCTGAGGAGACACGAGACA................................................................................................................................................................................................................................................2011.001000001
GGCCGAAGAGGTGGACATGT..................................................................................................................................................................................................................................................................2011.001000010
..........................AGACACGAGACAAGTTCCTTCTGGAG..................................................................................................................................................................................................................................2611.001000001
GGCCGAAGAGGTGGACATGTCTGAG.............................................................................................................................................................................................................................................................2511.001100000
.................................................................................................................................................................................................................................................................GAGGAGATCTTCATCGAGCGC2111.001000010
...................................................................................................................................................................................................................................................GAC--------GAGGAGGAGATCTTCATC......2111.001000010
.........GGTGGACATGTCTGAGGAGACACGA....................................................................................................................................................................................................................................................2511.001000010
.....................................................................................................................................................................................................................................CCAGCGATGAGAACGAC--------GAGG....................2111.001000010
............GGACATGTCTGAGGAGACACGA....................................................................................................................................................................................................................................................2211.001000010
.............................................................................................................................................................................................................................................GAGAACGAC--------GAGGAGGAG...............1811.001100000
droBip1
GGCCGAGGAGGTGGAACTCTCTGAGGAGACGAAAGAAAAGTTCCTTCTGGGTGAGTTTAGAT----CTCAT---------------------------------------GTC------TATCG------------AAGATTA-----GGTA-------TTTA-------ATGGTATACTT-T---GT-CCAACAGAGAAACTTGGCCTCGACAGTGACGC------GTCCAGCGATGA---GAGC--------GACGAGGAGATCTTTATCGAGCGCSizeHit CountTotal NormTotal
No Reads
droKik1
GGCGGAGGAGGTGGACCTGTCCCACGAGACACGCGATAAGTTCCTACTGGGTGAGTTTTATT----TTC---------------------------------------TAATT--T--------------------------A-----TGTATTCCTAAACTCACAA----T----ACCTC-T---GCTGTTCCAGAGAAACTCGGCTTCGAGAGCGA------CGAATCGGACGACA---GCAAT--------GACGAGGAGATCTTCATTGAGCGCSizeHit CountTotal NormTotal
No Reads
droFic1
GGTTGAGGAGGTGGAGATGTCCAAGGAGCCGCGCGATAAGTTCCTGTTGGGTAAGTATTTCT-------------------------------------------A--TAGTT--CCTTAAAGAA-----------------ACTTC--CTT-------ACTA-------ATACTGCGGTT-T---ATCCTTCCAGATAAATTCGGTTTCGACAGCGACAGCGAGGAGTTGGATTCGGA---GG--A---------------------------GTACSizeHit CountTotal NormTotal
No Reads
droEle1
GGCGGAGGAAGTGGACTTGTCCCAGGAGACGCGCGACGAGTTCCTCTTGGGTGAGTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
GGCGGAGGAGGTGGATATGTCCGAGGAGACGAACGACAGGTTCCTGTTGGGTGAGTTTTCCT----TTAA-----------------GGATTTAGGCCT-------------AGGAAA---------------TTGTA----AG---------------ACTAACAG--AATCTTA--TCCTA---TCCACTCCAGATAAACTTGGCTTTGTCAGCGAAAGCGGGGAATCGGATG-----------A------------------GTTCACTGAGAAGSizeHit CountTotal NormTotal
No Reads
droBia1
AGCGGAGGAGGTGGACATGTCCGAGGAGACGCGCGATAGGTTCCTGCTGGGTAAGTAAAACT----C-------------------------------------------------G--TTTTG------------AAAATAA-----AGAGC------TC-A-------TAACAATATTT-TGA-ACCTCTTCAGACAAACTGGGCTTCGACAGCGAAAGCGAGGAGTCGGATG-----------AGTACACCGAGAAGATGATCTTC------CACSizeHit CountTotal NormTotal
No Reads
droTak1
GGCGGAGGAGGTGGACATGTCCCAGGAGACACGGGATCGCTTCCTGCTGGGTGAGTTATCTTGAGC-------------------------------------TAG--CTTTG--GGTGGA-----------TTTGAA----AAATAT-----------AT-C-------ATC--ATATTT-T---ATCCCTTTAGACAAACTGGGCTTCGACAGCGAAAGCGAGGAGTCCGATG-----------A---------------------------ATACSizeHit CountTotal NormTotal
No Reads
droEug1
GGCGGAGGATGTGGACATGTCCGAGGAGACGCGCGATAGGTTCCTGCTAGGTAAGTTATACA----CTGAC-----------------------------------------T--TGA---------------TTGAA----AGATGAAAT-----------A-------ATC-TATGCTT-T---CCCACTTCAGAGAAACTCGGCTTCGACAGCGAAAGCGAGGAATCAGATG-----------AGTACACTGAGAAGATGATCTTC------CACSizeHit CountTotal NormTotal
No Reads
dm3
GGCGGAGGAAGTGGACATGTCTCAGGAGACCCGTGATAAATTCCTTCTGGGTAAGTTTTA----GC-------------------------------------CAA--TCATT--CGTTGATGGA-----------------ATGTAT-----------TCCA-------ATCGTATGTTT-T---ACCTTCTCAGAGAAACTGGGCTTCGACAGCGAAAGCGAGGAGTCAGATG-----------A---------------------------GTACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................................................................................................................................................................................................................GAAAGCGAGGAGTCAGATG-----------A---------------------------....2018.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GGACATGTCTCAGGAGACCCGTGAT.................................................................................................................................................................................................................................................2518.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007
..................................................................................................................................................................................................................GACAGCGAAAGCGAGGAGTCA...............................................2118.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................GACAGCGAAAGCGAGGAGTCAGA.............................................2315.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.......GAAGTGGACATGTCTCAG.............................................................................................................................................................................................................................................................1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................AGCGAAAGCGAGGAGTCAGAT............................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................CAGCGAAAGCGAGGAGTCAGA.............................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.......................................................................................................................................................................................................................CGAAAGCGAGGAGTCAGA.............................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................GAAAGCGAGGAGTCAGATG-----------A---------------------------GTAC2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.................................................................................................................................................................................................................CGACAGCGAAAGCGAGGA...................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................ATGGA-----------------ATGTAT-----------TCCA-------ATCGTATGTTT-................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................CGACAGCGAAAGCGAGGAGTCAGAT............................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................CTGGGCTTCGACAGCGAAA..........................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GGACATGTCTCAGGAGACCCGT....................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000001000000000000
..................................................................................................................................................................................................................GACAGCGAAAGCGAGGAGTC................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
..........GTGGACATGTCTCAGGAGA.........................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001000000000000
....................................................................................................................................................................................................................CAGCGAAAGCGAGGAGTC................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................ACTGGGCTTCGACAGCGAAAGCGAGGA...................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................................................................................................................................................................................................................GCGAAAGCGAGGAGTCAGATG-----------A---------------------------GT..2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.............GACATGTCTCAGGAGACCCGT....................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.................................................................................................................................................................................................................CGACAGCGAAAGCGAGGAGTCA...............................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................AGCGAAAGCGAGGAGTCAGATG-----------A---------------------------GT..2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TCTCAGGAGACCCGTGATAAATTCC..........................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...........................................................................................................................................................................................................................AGCGAGGAGTCAGATG-----------A---------------------------GTAC2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................CATT--CGTTGATGGA-----------------ATGT....................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................AACTGGGCTTCGACAGCGAAAGCGA......................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.....................................................................................................................................................................................................GAAACTGGGCTTCGACAGC..............................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AGTGGACATGTCTCAGGA...........................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................GAAAGCGAGGAGTCAGA.............................................1712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............CATGTCTCAGGAGACCCGT....................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................CGACAGCGAAAGCGAGGAGTC................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000
................ATGTCTCAGGAGACCCGTGAT.................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TA----GC-------------------------------------CAA--TCATT--CGTTGATGGA-----------------ATGT....................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................CTGGGCTTCGACAGCGAAAGCGAG.....................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................CGACAGCGAAAGCGAGGAG..................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CCGTGATAAATTCCTTCTG.....................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..................GTCTCAGGAGACCCGTGATA................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................CTGGGCTTCGACAGCGAAAGCGA......................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
....................................................................................................................................................................................................AGAAACTGGGCTTCGACAGC..............................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
........................................................................................................................................................................................................ACTGGGCTTCGACAGCGAAAGCGA......................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
................................................................................................................................................................................................................TCGACAGCGAAAGCGAGGAGTCAGAT............................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................AGGAGACCCGTGATAAATTCC..........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............GGACATGTCTCAGGAGACC.......................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...........TGGACATGTCTCAGGAGACCCGT....................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................AAACTGGGCTTCGACAGCGAAAGCGA......................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AGTGGACATGTCTCAGGAGAC........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................CGAAAGCGAGGAGTCAGATG-----------A---------------------------GT..2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AGTGGACATGTCTCAGGAGA.........................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................TTCGACAGCGAAAGCGAGGAGTC................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................GACAGCGAAAGCGAGGAGTCAGATG-----------................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AGTGGACATGTCTCAGGAGACCCGTGAT.................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................TGGGCTTCGACAGCGAAAGCGAG.....................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................CGAAAGCGAGGAGTCAGATG-----------A---------------------------GTAC2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.....................TCAGGAGACCCGTGATAAATTCCTTCTGGA...................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GACATGTCTCAGGAGACCCGTG...................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................CAGCGAAAGCGAGGAGTCA...............................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................CAGCGAAAGCGAGGAGTCAG..............................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................AAAGCGAGGAGTCAGATG-----------................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................ACTGGGCTTCGACAGCGAAAGCGAG.....................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
...................................................................................................................................................................................................................ACAGCGAAAGCGAGGAGTCAGATG-----------A---------------------------....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................GACAGCGAAAGCGAGGAGT.................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ACATGTCTCAGGAGACCCGTG...................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.........................................................................................................................................................................................................CTGGGCTTCGACAGCGAA...........................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................AGCGAAAGCGAGGAGTCA...............................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CTCAGGAGACCCGTGATAAATTCCTTC.......................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................AAGCGAGGAGTCAGATG-----------A---------------------------GTA.2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
....................CTCAGGAGACCCGTGATAA...............................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
................................................................................................................................................................................................................TCGACAGCGAAAGCGAGGA...................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.......................................................................................................................................................................................................................CGAAAGCGAGGAGTCAGATG-----------A---------------------------....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...................................................................................................................................................................................................GAGAAACTGGGCTTCGACAG...............................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................AAACTGGGCTTCGACAGCGAAAGC........................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.........AGTGGACATGTCTCAGGAGACCCG.....................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................GAGAAACTGGGCTTCGAC.................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.......................AGGAGACCCGTGATAAATTCCTTCTGG....................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................CA-------ATCGTATGTTT-T---ACCTTCTCAGA.................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CTCAGGAGACCCGTGATAAATT............................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.....................................................................................................................................................................................................................AGCGAAAGCGAGGAGTCAGA.............................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................GCGAGGAGTCAGATG-----------A---------------------------GTAC2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................ACCCGTGATAAATTCCTTCTGGA...................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AGTGGACATGTCTCAGGAGACCCGTGA..................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
........................................................................................................................................................................................................ACTGGGCTTCGACAGCGAAAGCGAGG....................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..CGGAGGAAGTGGACATGTCTCAGGA...........................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................GATGGA-----------------ATGTAT-----------TCCA-------ATCG........................................................................................................2011.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ACATGTCTCAGGAGACCCGT....................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................GTAT-----------TCCA-------ATCGTATGTTT-T---............................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
....................................................................................................................................................................................................................CAGCGAAAGCGAGGAGTCAGATG-----------A---------------------------GTA.2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.....................................................................................................................................................................................................................AGCGAAAGCGAGGAGTCAGATG-----------A---------------------------....2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........AAGTGGACATGTCTCAGGA...........................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
......................................................................................................................................................................................................................GCGAAAGCGAGGAGTCAGATG-----------A---------------------------G...2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.....................TCAGGAGACCCGTGATAAATT............................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.................................................................................................................................................................................................................CGACAGCGAAAGCGAGGAGTCAG..............................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................TTCGACAGCGAAAGCGAGG....................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
...........................................................................................................................................................................................................GGGCTTCGACAGCGAAAGCGA......................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
....................CTCAGGAGACCCGTGATAAA..............................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GTGATAAATTCCTTCTGG....................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................CGACAGCGAAAGCGAGGAGT.................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AAGTGGACATGTCTCAGGAG..........................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.........AGTGGACATGTCTCAGGAGACCCGT....................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..............ACATGTCTCAGGAGACCCGTGAT.................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...GGAGGAAGTGGACATGTCTCAGGAGAC........................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........AGTGGACATGTCTCAGGAGACC.......................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
......GGAAGTGGACATGTCTCAGG............................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................GCGAAAGCGAGGAGTCAGA.............................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CGTGATAAATTCCTTCTGG....................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GAAGTGGACATGTCTCAGGA...........................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...........................GACCCGTGATAAATTCCTT........................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................TGGGCTTCGACAGCGAAAGCGAGGAGT.................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................GACAGCGAAAGCGAGGAG..................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
......................CAGGAGACCCGTGATAAATT............................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CGCGGAGGAAGTAGACATGTCTCAGGAGAAACGTGATAAATTCCTGCTGGGTAAGTTTCA----GC-------------------------------------CAA--TAATT--CTTTGATGGA-----------------ATGTAT-----------ACCA-------ATCGTATGTTT-T---ACCTCCTCAGAGAAACTGGGCTTCGACAGCGAAAGCGAGGAGTCGGATG-----------A---------------------------GTACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................GAAAGCGAGGAGTCGGATG-----------G---------------------------....2012.00201100000000000000
.......................................................................................................................................................................................................................CGAAAGCGAGGAGTCGGAT............................................1912.00202000000000000000
......................................................................................................................................................................................................................GCGAAAGCGAGGAGTCGG..............................................1811.00101000000000000000
..........GTAGACATGTCTCAGGAGAA........................................................................................................................................................................................................................................................2011.00101000000000000000
......................................................................................................................................................................................................................GCGAAAGCGAGGAGTCGGAT............................................2011.00100100000000000000
.GCGGAGGAAGTAGACATGTCTCAGGAGA.........................................................................................................................................................................................................................................................2811.00100000000000001000
.....................................................................................................................................................................................................................AGCGAAAGCGAGGAGTCGGATG-----------A---------------------------GT..2511.00101000000000000000
........................................................................................................................................................................................................................GAAAGCGAGGAGTCGGATG-----------................................1911.00100010000000000000
.....................................................................................................................................................................................................GAAACTGGGCTTCGACAGCGA............................................................2111.00100010000000000000
......................................................................................................................................................................................................................GCGAAAGCGAGGAGTCGGATG-----------A---------------------------GT..2411.00100010000000000000
.................................................................................................................................................................................................................CGACAGCGAAAGCGAGGAGTC................................................2111.00101000000000000000
.................................................................................................................................................................................................................CGACAGCGAAAGCGAGGAGTCGGAT............................................2511.00101000000000000000
...............................CGTGATAAATTCCTGCTGGA...................................................................................................................................................................................................................................2011.00100010000000000000
..CGGAGGAAGTAGACATGTCTCAGGA...........................................................................................................................................................................................................................................................2511.00100010000000000000
...............................................................................................................................................................................................................TTCGACAGCGAAAGCGAGGAGTC................................................2311.00100010000000000000
...................................................................................................................................................................................................................ACAGCGAAAGCGAGGAGTCGGATG-----------A---------------------------GT..2711.00101000000000000000
....GAGGAAGTAGACATGTCTCAGG............................................................................................................................................................................................................................................................2211.00100100000000000000
.........................................................................................................................................................................................................................AAAGCGAGGAGTCGGATG-----------A---------------------------GTAC2311.00110000000000000000
.......................................................TTTCA----GC-------------------------------------CAA--TAATT--CTTT...............................................................................................................................................................1911.00100010000000000000
.............................AACGTGATAAATTCCTGC.......................................................................................................................................................................................................................................1811.00101000000000000000
...........................GAAACGTGATAAATTCCTGCTGGA...................................................................................................................................................................................................................................2411.00100010000000000000
.....................................................................................................................................................................................................................AGCGAAAGCGAGGAGTCGGAT............................................2111.00101000000000000000
.........................................................................................................................................................................................................................AAAGCGAGGAGTCGGATG-----------A---------------------------....1911.00100001000000000000
.........................................................................................................................................................................................................................AAAGCGAGGAGTCGGAT............................................1711.00100000000010000000
........AAGTAGACATGTCTCAGG............................................................................................................................................................................................................................................................1811.00100010000000000000
CGCGGAGGAAGTAGACATGTCT................................................................................................................................................................................................................................................................2211.00100100000000000000
....GAGGAAGTAGACATGTCTCAG.............................................................................................................................................................................................................................................................2111.00100010000000000000
.........AGTAGACATGTCTCAGGAGAAAC......................................................................................................................................................................................................................................................2311.00100010000000000000
......................CAGGAGAAACGTGATAAATT............................................................................................................................................................................................................................................2011.00101000000000000000
......................................................................................................................................................................................................................GCGAAAGCGAGGAGTCGGATG-----------A---------------------------....2211.00101000000000000000
...GGAGGAAGTAGACATGTCTCAGGAG..........................................................................................................................................................................................................................................................2511.00100000000000001000
droSec2
CGCGGAGGAAGTAGACATGTCTCAGGAGAAACGTGATAAATTCCTGCTGGGTAAGTTTTA----GC-------------------------------------CAA--TAATT--CGTTTATGGA-----------------ATGTAT-----------ACTA-------ATCGTATAGTT-T---ATCTCCTCAGAGAAACTGGGCTTCGACAGCGAAAGCGAGGAGTCGGATG-----------A---------------------------GTACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........AAGTAGACATGTCTCAGGAGAAAC......................................................................................................................................................................................................................................................2412.0020200
.........AGTAGACATGTCTCAGGAGAAACGT....................................................................................................................................................................................................................................................2512.0020200
......................................................................................................................................................................................................AAACTGGGCTTCGACAGC..............................................................1812.0020020
.........AGTAGACATGTCTCAGGAGAAAC......................................................................................................................................................................................................................................................2312.0021010
.....................................................................................................................................................................................................GAAACTGGGCTTCGACAGC..............................................................1911.0010010
.........................................................................................................................................................................................................................AAAGCGAGGAGTCGGATG-----------A---------------------------GTA.2211.0010010
..............................ACGTGATAAATTCCTGCTGGAG..................................................................................................................................................................................................................................2211.0010100
.................................................................................................................................................................................................................CGACAGCGAAAGCGAGGAGTC................................................2111.0010010
..................................................................................................................................................................................................................GACAGCGAAAGCGAGGAGTCGGATG-----------A---------------------------GT..2811.0010100
...................................................................................................................................................................................................................ACAGCGAAAGCGAGGAGTCGG..............................................2111.0010010
.......................................................................................................................................................................................................AACTGGGCTTCGACAGCGAAAGCGAG.....................................................2611.0010100
......................................................................................................................................................................................................................GCGAAAGCGAGGAGTCGGATG-----------A---------------------------....2211.0010100
.......................................................................................................................................................................................................AACTGGGCTTCGACAGCG.............................................................1811.0010010
..................................................................................................................................................................................................................GACAGCGAAAGCGAGGAGTCGGATG-----------A---------------------------....2611.0011000
...........TAGACATGTCTCAGGAGAAAC......................................................................................................................................................................................................................................................2111.0010100
..........GTAGACATGTCTCAGGAGAAACGTG...................................................................................................................................................................................................................................................2511.0010010
...............................CGTGATAAATTCCTGCTGGA...................................................................................................................................................................................................................................2011.0010100
.......................................................................................................................................................................................................AACTGGGCTTCGACAGCGAAA..........................................................2111.0010010
....................................................................................................................................................................................................................CAGCGAAAGCGAGGAGTCGGG.............................................2111.0010001
.......................................................................................................................................................................................................AACTGGGCTTCGACAGCGAAAGC........................................................2311.0010001
.......................................................................................................................................................................................................AACTGGGCTTCGACAGCGAAAGCGA......................................................2511.0010100
......................................................................................................................................................................................................................GCGAAAGCGAGGAGTCGGATG-----------A---------------------------GTA.2511.0010100
.GCGGAGGAAGTAGACATGTCTCAGGA...........................................................................................................................................................................................................................................................2611.0010010
............................AAACGTGATAAATTCCTGCTGGAG..................................................................................................................................................................................................................................2411.0010010
......................................................................................................................................................................................................AAACTGGGCTTCGACAGCGAAAGCGAGG....................................................2811.0010100
...................................................................................................................................................................................................GAGAAACTGGGCTTCGACAGC..............................................................2111.0011000
.................................................................................................................................................................................................................CGACAGCGAAAGCGAGGAGTCGGATG-----------A---------------------------GT..2911.0010100
..........GTAGACATGTCTCAGGAGAAACGTGA..................................................................................................................................................................................................................................................2611.0010100
......................................................................................................................................................................................................................GCGAAAGCGAGGAGTCGGAT............................................2011.0010010
......................................................................................................................................................................................................................GCGAAAGCGAGGAGTCGGATG-----------A---------------------------GT..2411.0010100
.....................................................................................................................................................................................................GAAACTGGGCTTCGACAGCGAAAGC........................................................2511.0010010
.....................................................................................................................................................................................................................AGCGAAAGCGAGGAGTCGGATG-----------A---------------------------GT..2511.0010010
droYak3
GGCGGAGGAAGTGGACATGTCTCAGGAGACTCGTGATAAGTTCCTGCTTGGTAAGTTTGA----GA-------------------------------------AAA--TTATT--CGTTTATGGA-----------------ATGTAT-----------TCCA-------ATCATATGTTC-T---ACCTCTTCAGAGAAACTGGGCTTCGACAGCGGCAGCGAGGAGTCGGATG-----------A---------------------------GTACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................................................................................................................................................................................................GGCAGCGAGGAGTCGGATG-----------A---------------------------....2018.00804000040000
......GGAAGTGGACATGTCTCAGGAGAC........................................................................................................................................................................................................................................................2414.00400000000004
...GGAGGAAGTGGACATGTCTCAGGA...........................................................................................................................................................................................................................................................2413.00302000010000
............GGACATGTCTCAGGAGACTCGT....................................................................................................................................................................................................................................................2213.00301000020000
.......GAAGTGGACATGTCTCAGGAGACTCGTGA..................................................................................................................................................................................................................................................2912.00200000000002
........................................................................................................................................................................................................................GGCAGCGAGGAGTCGGATG-----------A---------------------------GT..2212.00210000010000
.......................................................................................................................................................................................................AACTGGGCTTCGACAGCGGCAGCGAGGA...................................................2812.00200000020000
......................................................................................................................................................................................................AAACTGGGCTTCGACAGCGGCAGC........................................................2412.00200000020000
......................................................................................................................................................................................................AAACTGGGCTTCGACAGCGGCAGCGAGG....................................................2811.00100000010000
............................ACTCGTGATAAGTTCCTGC.......................................................................................................................................................................................................................................1911.00100100000000
.........................................................................................................................................................................................................................GCAGCGAGGAGTCGGATG-----------A---------------------------GT..2111.00100000010000
..........GTGGACATGTCTCAGGAGACTCGT....................................................................................................................................................................................................................................................2411.00100000010000
......GGAAGTGGACATGTCTCAGGAGACT.......................................................................................................................................................................................................................................................2511.00100000000001
.......................................................................................................................................................................................................AACTGGGCTTCGACAGCGGC...........................................................2011.00101000000000
....................CTCAGGAGACTCGTGATAAGTT............................................................................................................................................................................................................................................2211.00100000010000
.....................................................................................................................................................................................................................AGCGGCAGCGAGGAGTCGGATG-----------................................2211.00100000010000
......................CAGGAGACTCGTGATAAGTT............................................................................................................................................................................................................................................2011.00100000010000
...........TGGACATGTCTCAGGAGACT.......................................................................................................................................................................................................................................................2011.00101000000000
...........................GACTCGTGATAAGTTCCTGCTTGA...................................................................................................................................................................................................................................2411.00101000000000
.........................................................................................................................................................................................................CTGGGCTTCGACAGCGGC...........................................................1811.00101000000000
.................................................................................................................................................................................................................CGACAGCGGCAGCGAGGAGTCGGATG-----------A---------------------------....2711.00101000000000
........AAGTGGACATGTCTCAGGAGACTCGTG...................................................................................................................................................................................................................................................2711.00100010000000
................ATGTCTCAGGAGACTCGTGATAAGT.............................................................................................................................................................................................................................................2511.00100000010000
........AAGTGGACATGTCTCAGGAGACT.......................................................................................................................................................................................................................................................2311.00100000010000
...........................................................................................................................................................................................................................AGCGAGGAGTCGGATG-----------A---------------------------GT..1911.00100000010000
.................................................................................................................................................................................................................CGACAGCGGCAGCGAGGAGTCGGA.............................................2411.00101000000000
...............CATGTCTCAGGAGACTCGTG...................................................................................................................................................................................................................................................2011.00100000010000
....................CTCAGGAGACTCGTGATA................................................................................................................................................................................................................................................1811.00101000000000
.............................CTCGTGATAAGTTCCTGCT......................................................................................................................................................................................................................................1911.00100100000000
.............GACATGTCTCAGGAGACTCGTGA..................................................................................................................................................................................................................................................2311.00101000000000
......................................................................................................................................................................................................................GCGGCAGCGAGGAGTCGGATG-----------A---------------------------....2211.00100100000000
..............................................................................................................................................................................................................CTTCGACAGCGGCAGCGAGGAGTCG...............................................2511.00100000010000
...........................GACTCGTGATAAGTTCCTGCTT.....................................................................................................................................................................................................................................2211.00101000000000
..........GTGGACATGTCTCAGGAGACT.......................................................................................................................................................................................................................................................2111.00100000010000
...............CATGTCTCAGGAGACTCGTGATA................................................................................................................................................................................................................................................2311.00100000010000
......................................................................................................................................................................................................AAACTGGGCTTCGACAGCGGC...........................................................2111.00100000010000
..............................................................................................................................................................................................................CTTCGACAGCGGCAGCGAGGA...................................................2111.00101000000000
.............GACATGTCTCAGGAGACTCGTGATAAGT.............................................................................................................................................................................................................................................2811.00100000010000
.......GAAGTGGACATGTCTCAGGA...........................................................................................................................................................................................................................................................2011.00100000010000
................ATGTCTCAGGAGACTCGTG...................................................................................................................................................................................................................................................1911.00101000000000
..........GTGGACATGTCTCAGGAGACTCGTGATA................................................................................................................................................................................................................................................2811.00100000010000
droEre2
GGCTGAGGAAGTGGACATTTCTCAGGAGACTCGTGATAAGTTCCTGCTTGGTAAGTGTCA----GC-------------------------------------CAA--TTATT--CGCTTATAGA-----------------ACATAT-----------TACA-------ATCGTAGCATA-T---ACCTTTTCAGAGAAACTGGGCTTCGACAACGCAAGCGAGGAGTCGGATG-----------A-------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........................GACTCGTGATAAGTTCCTGCTTGA...................................................................................................................................................................................................................................2412.0022000000
....................CTCAGGAGACTCGTGATAAG..............................................................................................................................................................................................................................................2012.0021000010
.......................................................................................................................................................................................................AACTGGGCTTCGACAACGC............................................................1911.0010000100
.................................................................................................................................................................................................................CGACAACGCAAGCGAGGAGTC................................................2111.0011000000
.........................GAGACTCGTGATAAGTTCCTGCTTG....................................................................................................................................................................................................................................2511.0010100000
....................................................................................................................................................................................................................CAACGCAAGCGAGGAGTCG...............................................1911.0010001000
............GGACATTTCTCAGGAGACT.......................................................................................................................................................................................................................................................1911.0010000100
....GAGGAAGTGGACATTTCTCA..............................................................................................................................................................................................................................................................2011.0011000000
......................CAGGAGACTCGTGATAAGTTCC..........................................................................................................................................................................................................................................2211.0010000100
.....................................................................................................................................................................................................GAAACTGGGCTTCGACAACGCAAG.........................................................2411.0010000100
....................................................................................................................................................................................................................CAACGCAAGCGAGGAGTCGGATG-----------A-------------------------------2411.0010001000
....................................................................................................................................................................................................................CAACGCAAGCGAGGAGTCGGATG-----------................................2311.0011000000
..........GTGGACATTTCTCAGGAGACT.......................................................................................................................................................................................................................................................2111.0010000100
..................................................................................................................................................................................................................GACAACGCAAGCGAGGAGTCGGATG-----------A-------------------------------2611.0010000010
..........GTGGACATTTCTCAGGAGACTCGT....................................................................................................................................................................................................................................................2411.0010000100
.............GACATTTCTCAGGAGACTCGT....................................................................................................................................................................................................................................................2111.0010001000
............GGACATTTCTCAGGAGACTCGT....................................................................................................................................................................................................................................................2211.0010000100
...........................GACTCGTGATAAGTTCCTGCTTGAG..................................................................................................................................................................................................................................2511.0010000100
.......................AGGAGACTCGTGATAAGT.............................................................................................................................................................................................................................................1811.0010000100
..............................TCGTGATAAGTTCCTGCTTGAG..................................................................................................................................................................................................................................2211.0010000010
..........................................................................................................................................................................................................................AAGCGAGGAGTCGGATG-----------A-------------------------------1811.0010000010
..........................AGACTCGTGATAAGTTCCTGCTTGA...................................................................................................................................................................................................................................2511.0011000000
.............................CTCGTGATAAGTTCCTGCTTGA...................................................................................................................................................................................................................................2211.0011000000
...................TCTCAGGAGACTCGTGATA................................................................................................................................................................................................................................................1911.0010000100
................ATTTCTCAGGAGACTCGTGATAAGT.............................................................................................................................................................................................................................................2511.0010000010
......................CAGGAGACTCGTGATAAGTTCCTGCTT.....................................................................................................................................................................................................................................2711.0010100000
...............................CGTGATAAGTTCCTGCTTGA...................................................................................................................................................................................................................................2011.0010000100
...........................GACTCGTGATAAGTTCCTGCTT.....................................................................................................................................................................................................................................2211.0011000000
.........AGTGGACATTTCTCAGGA...........................................................................................................................................................................................................................................................1811.0010000010
................................GTGATAAGTTCCTGCTTG....................................................................................................................................................................................................................................1811.0010000010
..........GTGGACATTTCTCAGGAGACTCGTG...................................................................................................................................................................................................................................................2511.0010000100
..................................GATAAGTTCCTGCTTGAG..................................................................................................................................................................................................................................1870.1410000100

Generated: 06/08/2015 at 04:24 PM