dpe_158

GAAGGAGTGAAGATCCCATGGGATACTATAGGAATGCTGCGACGCTCTTTAAAGTGGCGGTGACGTGTTGGTAATAATATTCATATCACAGCCAGCTTTGAGAGCGTTGCGGCCCTTCTGAAATATGCGCCTCATTGGGGTTTATTCGAACA *********************************((((((((((((((.((((((((.((((.(((...((....))...))).)))).)))).))))))))))))))))))....*********************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V057 head	M042 female body	V050 head	V111 male body	V042 embryo	M021 embryo
...................................................................................TATCACAGCCAGCTTTGAG..................................................	19	0	2	158.50	317	56	213	40	6	2	0
...................................................................................TATCACAGCCAGCTTTGA...................................................	18	0	5	25.20	126	74	17	16	0	13	6
...................................................................................TATCACAGCCAGCTTGAGGAGCG..............................................	23	3	1	22.00	22	5	2	1	14	0	0
...................................................................................TATCACAGCCAGCTTTGAGA.................................................	20	0	1	22.00	22	2	20	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGAGAG................................................	21	0	1	18.00	18	3	9	5	1	0	0
...................................................................................TATCACAGCCAGCTTTGAGT.................................................	20	1	2	16.00	32	7	12	11	2	0	0
...................................................................................TATCACAGCCAGCTTTGAGTGG...............................................	22	2	3	15.67	47	38	0	2	0	7	0
...................................................................................TATCACAGCCAGCTTTAGGAG................................................	21	2	1	12.00	12	0	10	1	1	0	0
...................................................................................TATCACAGCCAGCTTTGAGGGC...............................................	22	1	1	12.00	12	8	0	4	0	0	0
...................................................................................TATCACAGCCAGCTTTGAGAGG...............................................	22	1	1	11.00	11	10	0	0	0	1	0
...................................................................................TATCACAGCCAGCTTGAGGAGC...............................................	22	3	2	10.00	20	2	1	7	10	0	0
.........................CTATAGGAATGCTGCGACG............................................................................................................	19	0	1	10.00	10	3	1	3	1	2	0
...................................................................................TATCACAGCCAGCTTTGAGCAC...............................................	22	2	2	9.50	19	16	0	3	0	0	0
...................................................................................TATCACAGCCAGCTTTGAGGG................................................	21	1	3	8.00	24	12	2	5	0	4	1
...................................................................................TATCACAGCCAGCTTTGAGGTC...............................................	22	2	2	7.50	15	13	0	1	1	0	0
...................................................................................TATCACAGCCAGCTTTGAGTGT...............................................	22	2	1	7.00	7	7	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGAGACG...............................................	22	2	2	6.50	13	7	0	6	0	0	0
...................................................................................TATCACAGCCAGCTTTGAGAA................................................	21	1	2	6.00	12	0	5	4	0	3	0
...................................................................................TATCACAGCCAGCTTTGCGAGG...............................................	22	2	1	6.00	6	6	0	0	0	0	0
....................................................................................ATCACAGCCAGCTTTGAG..................................................	18	0	2	6.00	12	0	12	0	0	0	0
..........................TATAGGAATGCTGCGACG............................................................................................................	18	0	1	6.00	6	3	0	1	0	1	1
...................................................................................TATCACAGCCAGCTTGAGGAG................................................	21	3	10	5.80	58	11	14	19	12	2	0
...................................................................................TATCACAGCCAGCTTTGAGAAC...............................................	22	1	1	5.00	5	3	0	2	0	0	0
...................................................................................TATCACAGCCAGCTTTGACTCC...............................................	22	3	1	5.00	5	5	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGAGTAC...............................................	22	2	2	5.00	10	8	0	2	0	0	0
...................................................................................TATCACAGCCAGCTTTGAAA.................................................	20	1	1	5.00	5	2	3	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGGGAG................................................	21	1	1	5.00	5	3	0	1	1	0	0
...................................................................................TATCACAGCCAGCTTTGAGAGCG..............................................	23	0	1	5.00	5	1	1	0	1	2	0
...................................................................................TATCACAGCCAGCTTTGAGTG................................................	21	1	1	5.00	5	5	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGAGAGC...............................................	22	0	1	5.00	5	1	2	1	0	1	0
...................................................................................TATCACAGCCAGCTTTGAGGGT...............................................	22	2	3	5.00	15	5	1	1	0	8	0
...................................................................................TATCACAGCCAGCTTGATGAGC...............................................	22	3	2	4.50	9	1	4	2	1	1	0
...................................................................................TATCACAGCCATCTTTGCGAGG...............................................	22	3	1	4.00	4	3	0	1	0	0	0
...................................................................................TATCACAGCCAGCTTTGGGAGC...............................................	22	1	1	4.00	4	3	0	1	0	0	0
...................................................................................TATCACAGCCAGCTTTGATA.................................................	20	1	4	3.75	15	7	6	1	0	1	0
...................................................................................TATCACAGCCAGCTTTGAA..................................................	19	1	5	3.60	18	9	5	3	1	0	0
...................................................................................TATCACAGCCAGCTTTCAGCTC...............................................	22	3	2	3.50	7	4	0	3	0	0	0
...................................................................................TATCACAGCCAGCTTTGAGTCT...............................................	22	3	2	3.50	7	6	0	0	0	1	0
...................................................................................TATCACAGCCAGCTTTGAGCTC...............................................	22	2	1	3.00	3	3	0	0	0	0	0
...................................................................................TAGCACAGCCAGCTTTGAGGGC...............................................	22	2	1	3.00	3	3	0	0	0	0	0
.......................TACTATAGGAATGCTGCGACG............................................................................................................	21	0	1	3.00	3	1	0	0	0	2	0
............................................CTCTTTAAAGTGGCGGTGACGTG.....................................................................................	23	0	1	3.00	3	0	3	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGAGTGC...............................................	22	1	1	3.00	3	2	1	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGAGCCC...............................................	22	2	1	3.00	3	3	0	0	0	0	0
...................................................................................TATCACAGCCAGTTTGGAGAGG...............................................	22	3	1	3.00	3	2	0	0	0	1	0
...................................................................................TATCACAGCCACCTTTGAGGGC...............................................	22	2	1	3.00	3	3	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGAGTT................................................	21	2	2	3.00	6	4	2	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGAGGCC...............................................	22	2	2	3.00	6	3	0	3	0	0	0
...................................................................................TATCACAGCCAGCTTTGGGTGG...............................................	22	3	4	2.75	11	8	0	1	0	2	0
...................................................................................TATCACAGCCAGCTTTGAGCT................................................	21	2	2	2.50	5	4	1	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGAGAAA...............................................	22	2	2	2.50	5	2	2	1	0	0	0
...................................................................................TATCACAGCCAGCTTTCAGCAC...............................................	22	3	2	2.50	5	4	0	1	0	0	0
...................................................................................TATCACAGCCAGCTTTGT...................................................	18	1	5	2.40	12	11	0	1	0	0	0
...................................................................................TATCACTGCCAGCTTTGAGTGG...............................................	22	3	3	2.33	7	6	0	1	0	0	0
...................................................................................TAGCACAGCCAGCTTTGAGGCC...............................................	22	3	2	2.00	4	4	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGAGAGT...............................................	22	1	1	2.00	2	1	0	0	1	0	0
...................................................................................TATGACAGCCAGCTTTGAGGGC...............................................	22	2	1	2.00	2	2	0	0	0	0	0
...................................................................................TATCACAGCCAGTTTTGCGAGG...............................................	22	3	1	2.00	2	1	0	0	0	1	0
.....................................................................................TCACAGCCAGCTTTGATAGCT..............................................	21	2	1	2.00	2	0	1	1	0	0	0
...................................................................................TATCACAGCCAGCTTGGAGAGG...............................................	22	2	1	2.00	2	2	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTGAGGAGCGT.............................................	24	3	1	2.00	2	0	0	0	2	0	0
...................................................................................TATCACAGCCAGCTTTAGGAGCG..............................................	23	2	1	2.00	2	1	1	0	0	0	0
.....................................................................................TCACAGCCAGCTTTGATAGC...............................................	20	1	1	2.00	2	0	2	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGAGGGCCT.............................................	24	2	1	2.00	2	2	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTCAGGAGC...............................................	22	3	2	2.00	4	0	0	0	0	0	4
...................................................................................TATCACAGCCAGCTTTAGGA.................................................	20	2	1	2.00	2	0	2	0	0	0	0
.....................................................................................TCACAGCCAGCTTTGAGAGCT..............................................	21	1	1	2.00	2	1	1	0	0	0	0
........................ACTATAGGAATGCTGCGACG............................................................................................................	20	0	1	2.00	2	1	0	0	1	0	0
...................................................................................TATCACAGCCAGCTTTACGAGG...............................................	22	3	1	2.00	2	0	0	2	0	0	0
...................................................................................TAGCACAGCCAGCTTTGAGGTC...............................................	22	3	2	2.00	4	4	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTAAGTGT...............................................	22	3	1	2.00	2	2	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGATAGC...............................................	22	1	1	2.00	2	0	2	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGAGAGA...............................................	22	1	1	2.00	2	0	1	1	0	0	0
...................................................................................TATCACAGCCAGCTTTGAGGGCG..............................................	23	1	1	2.00	2	1	0	1	0	0	0
...................................................................................TATCACAGCCAGCTTTTAGTTC...............................................	22	3	1	2.00	2	2	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTGGCGAGG...............................................	22	3	1	2.00	2	2	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGAGTCC...............................................	22	2	1	2.00	2	1	0	1	0	0	0
...................................................................................TATCACAGCCAGCTTTGATAG................................................	21	1	2	2.00	4	0	4	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGAGTTC...............................................	22	2	1	2.00	2	2	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGGGTGT...............................................	22	3	1	2.00	2	2	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGAGCCT...............................................	22	3	3	1.67	5	4	0	1	0	0	0
...................................................................................TATCACAGCCAGCTTTGAGCGG...............................................	22	2	3	1.67	5	3	0	2	0	0	0
...................................................................................CATCACAGCCAGCTTTGAG..................................................	19	1	2	1.50	3	1	2	0	0	0	0
...................................................................................TATCACGGCCAGCTTTGAG..................................................	19	1	2	1.50	3	1	0	2	0	0	0
...................................................................................TATCACAGCCAGCTTTGGGGG................................................	21	2	4	1.50	6	5	0	0	0	1	0
...................................................................................TATCACAGCCAGCTTTTAGGTC...............................................	22	3	2	1.50	3	3	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGACTTC...............................................	22	3	2	1.50	3	3	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGCGTGG...............................................	22	3	3	1.33	4	3	0	0	0	1	0
...................................................................................TATCACAGCCAGCTTTGAGGGA...............................................	22	2	3	1.33	4	2	2	0	0	0	0
...................................................................................TATCACAGCCACCTTTGAGA.................................................	20	1	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGTGGTC...............................................	22	3	2	1.00	2	2	0	0	0	0	0
.....................................................................................TCACAGCCAGCTTTGAGGGCTCT............................................	23	3	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGACAGCTTTGCGAGG...............................................	22	3	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCATCTTTGAGAGG...............................................	22	2	1	1.00	1	0	0	1	0	0	0
...................................................................................TATCACAGCCAGCTTGAAGAGG...............................................	22	3	2	1.00	2	1	0	1	0	0	0
...................................................................................TATCACAGCCAGCTTTGTGAGG...............................................	22	2	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCTAGCTTTGAGGGC...............................................	22	2	1	1.00	1	0	0	1	0	0	0
...................................................................................TATCACAGCCATCTTTGAGGTC...............................................	22	3	2	1.00	2	2	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGGGTGC...............................................	22	2	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGAGACT...............................................	22	2	1	1.00	1	0	0	1	0	0	0
...................................................................................TAGCACAGCCAGCTTTGAGTCC...............................................	22	3	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGATAGCT..............................................	23	2	1	1.00	1	0	0	0	0	1	0
...................................................................................TATCAGAGCCAGCTTTGAGAGG...............................................	22	2	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACTGCCAGCTTTGAGTG................................................	21	2	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTTAAACC...............................................	22	3	1	1.00	1	0	0	1	0	0	0
...................................................................................TATCACAGCCAGCTTTGAGAAT...............................................	22	2	2	1.00	2	1	0	1	0	0	0
...................................................................................TATCACAGCCAGTTTTGAG..................................................	19	1	2	1.00	2	2	0	0	0	0	0
...................................................................................TAGCACAGGCAGCTTTGAGGGC...............................................	22	3	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGGGGGC...............................................	22	2	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCCTTCAGGGC...............................................	22	3	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTAAG..................................................	19	1	2	1.00	2	1	0	1	0	0	0
...................................................................................TATCACAGCCAGCTTTAAGGGC...............................................	22	2	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGCGAGGT..............................................	23	3	1	1.00	1	1	0	0	0	0	0
.....................GATACTATAGGAATGCTGCGACG............................................................................................................	23	0	1	1.00	1	0	0	0	1	0	0
...................................................................................TATCACAGCCAGCTTTGCGCGC...............................................	22	2	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTTTGAGCGT.............................................	24	2	1	1.00	1	0	1	0	0	0	0
...................................................................................TATCGCAGCCAGCTTTGAG..................................................	19	1	2	1.00	2	0	1	1	0	0	0
...................................................................................TATCACAGCCAGCTTTGAGGACGT.............................................	24	2	1	1.00	1	0	0	0	1	0	0
.....................................................................................TCACAGCCAGCTTTGATAG................................................	19	1	2	1.00	2	0	1	0	0	1	0
...................................................................................TATCACAGCCAGCTTTGAGGTCTT.............................................	24	3	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTGGAGAGGT..............................................	23	3	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTCGAGGGC...............................................	22	2	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTGGAGAGTTT.............................................	24	3	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTGGAGAGGCT.............................................	24	3	1	1.00	1	1	0	0	0	0	0
...................................................................................TAACACAGCCAGCTTTGAG..................................................	19	1	2	1.00	2	1	0	1	0	0	0
...................................................................................TATCACAGCCACCTTTAAGAGC...............................................	22	2	1	1.00	1	0	0	1	0	0	0
...................................................................................TATCACAGCCAGCTTAAGGAG................................................	21	3	1	1.00	1	0	0	0	0	0	1
...................................................................................TATCACAGCCAGCTTTTAGGGC...............................................	22	2	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTCAGAAC...............................................	22	2	1	1.00	1	0	0	1	0	0	0
...................................................................................TAGCACAGCCAGCTTTGAGGGCT..............................................	23	3	1	1.00	1	1	0	0	0	0	0
.....................................................................................TCACAGACAGCTTTGAGCACGT.............................................	22	3	1	1.00	1	1	0	0	0	0	0
............................................GTCTTCAAAGTGGCGGTGAC........................................................................................	20	2	1	1.00	1	0	1	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGTGAG................................................	21	1	1	1.00	1	1	0	0	0	0	0
...................................................................................TAACACAGCCAGCTTTGAGTGT...............................................	22	3	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACGGCCAGCTTTGGGTG................................................	21	3	1	1.00	1	0	0	0	0	1	0
...................................................................................TATCACAGCAAGTTTTGAGGGC...............................................	22	3	1	1.00	1	0	0	1	0	0	0
...................................................................................TATCACAGCCAGCTTTGATAGCA..............................................	23	2	1	1.00	1	0	0	1	0	0	0
...................................................................................TATCACAGCCCGCTTTGAGAT................................................	21	2	1	1.00	1	0	0	1	0	0	0
...................................................................................TATCACAGCCAGCTTTTAGTGG...............................................	22	3	4	1.00	4	4	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGAGAATG..............................................	23	2	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGACTGT...............................................	22	3	3	1.00	3	3	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGGGA.................................................	20	1	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACACCCAGCTTTGAGGCC...............................................	22	3	2	1.00	2	1	0	1	0	0	0
...................................................................................TATCACAGCCAGCTTTAAGGGCCTT............................................	25	3	1	1.00	1	1	0	0	0	0	0
.....................................................................................TCACAGCCAGCTTTGAGGGCCT.............................................	22	2	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTAAGAGG...............................................	22	2	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCTCAGCCAGCTTTGAGTGT...............................................	22	3	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACACCCAGCTTTGAGTGT...............................................	22	3	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGTTTTGAGGGC...............................................	22	2	1	1.00	1	1	0	0	0	0	0
...................................................................................TAGCACAGCCAGCTTTAAGGGC...............................................	22	3	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGAGCGC...............................................	22	1	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCACCTTTAAGAGG...............................................	22	3	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGAGAGCTC.............................................	24	2	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTAGAGTGT...............................................	22	3	1	1.00	1	1	0	0	0	0	0
...................................................................................TATTACAGCCAGCTTTGAGTGC...............................................	22	2	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTAAGTG................................................	21	2	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGAGTTGAGCGC...............................................	22	3	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCACCTTTGAGCGC...............................................	22	2	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTCAGGAGCG..............................................	23	3	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCGGGTTTGAGAG................................................	21	2	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTAGAGTGC...............................................	22	2	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTAAAAAC...............................................	22	3	1	1.00	1	0	0	1	0	0	0
...................................................................................TATCACAGCCAGCTTTGAGCG................................................	21	1	1	1.00	1	0	1	0	0	0	0
...................................................................................TAGCACAGCCAGCTTTGAGCCC...............................................	22	3	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCTAGCTTTGAGCGCC..............................................	23	3	1	1.00	1	0	0	1	0	0	0
...................................................................................TATCAGAGCCAGCTTTGAGAACA..............................................	23	3	1	1.00	1	0	0	1	0	0	0
....................................................................................ATCACAGCCAGCTTTGAGA.................................................	19	0	1	1.00	1	0	1	0	0	0	0
...................................................................................TATCACAGCCAGCTTCGAGGTC...............................................	22	3	2	1.00	2	2	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGAGAGGT..............................................	23	2	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCCGCTTTGAGTGG...............................................	22	3	3	1.00	3	3	0	0	0	0	0
...................................................................................TATCACAGCCAGCGTTAAGGGC...............................................	22	3	1	1.00	1	1	0	0	0	0	0
............................................CTCTTTAAAGTGGCGGTGACGT......................................................................................	22	0	1	1.00	1	0	1	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGCGAGT...............................................	22	2	1	1.00	1	0	0	1	0	0	0
...................................................................................TATCACTGCCAGCTTTAAGGGC...............................................	22	3	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCAACCTTTGAGAGCCT.............................................	24	3	1	1.00	1	0	0	1	0	0	0
...................................................................................TATCACAGCCAGCTTTGCGAGTT..............................................	23	3	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTTGGAGCG..............................................	23	2	1	1.00	1	0	0	0	1	0	0
...................................................................................TATCACAGCCAGCTTCATGAGC...............................................	22	3	1	1.00	1	0	1	0	0	0	0
.....................................................................................TCACAGCCAGCTTTGATA.................................................	18	1	4	1.00	4	4	0	0	0	0	0
...................................................................................TATCACAGACAGCTTTTAGGGC...............................................	22	3	1	1.00	1	1	0	0	0	0	0
..................................................................................GTATCACAGCCAGCTTTAGGAG................................................	22	3	1	1.00	1	0	1	0	0	0	0
...................................................................................TATCACAGCCGGCTTTGAGTTC...............................................	22	3	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGGCACCTTTGAGGGC...............................................	22	3	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACTGCCAGCTTTAAGCGC...............................................	22	3	1	1.00	1	1	0	0	0	0	0
............................................CTCTTTAAAGTGGCGGGGACGGG.....................................................................................	23	2	1	1.00	1	1	0	0	0	0	0
...................................................................................TATGACAGCCAGCTTTGAGCG................................................	21	2	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCCTTGAGCTC...............................................	22	3	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGCGAGTC..............................................	23	3	1	1.00	1	1	0	0	0	0	0
.....................................................................................TCACAGCCAGCTTTGAGGGCTT.............................................	22	2	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGTTTTGAGAGG...............................................	22	2	1	1.00	1	0	0	1	0	0	0
...................................................................................TATCACAGTCAGCTTTGAGTGG...............................................	22	3	3	1.00	3	3	0	0	0	0	0
...................................................................................TATCACAGCCAACTTTGAGCCC...............................................	22	3	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGAGC.................................................	20	1	2	1.00	2	0	2	0	0	0	0
...................................................................................TATCACATCCAGCTTTGAGTG................................................	21	2	1	1.00	1	0	0	1	0	0	0
...................................................................................TATCACAGCCAGCTTTGAGACA...............................................	22	2	1	1.00	1	0	0	1	0	0	0
...................................................................................TATCACAGCCACCTTTGAAAAC...............................................	22	3	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTGCAGAGG...............................................	22	3	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTATGA.................................................	20	2	1	1.00	1	0	1	0	0	0	0
.........................CTATAGGTATGCTGCGACG............................................................................................................	19	1	1	1.00	1	0	0	0	0	1	0
.....................................................................................TCACAGCCAGCTTTGACGGCTT.............................................	22	3	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGTTTTGTGAG................................................	21	2	1	1.00	1	1	0	0	0	0	0
............................................CTCTTTAAAGTGGCGGGGACGCG.....................................................................................	23	2	1	1.00	1	0	0	1	0	0	0
.....................................................................................ACACAGCCAGCTTTGAGGGCCTT............................................	23	3	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTCAGTGT...............................................	22	3	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGGCAGCTTTGAGAG................................................	21	1	1	1.00	1	0	1	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGAGAGCC..............................................	23	1	1	1.00	1	0	0	1	0	0	0
...................................................................................TATCACAGCCAGCTTTGCGAAC...............................................	22	2	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGACATC...............................................	22	2	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGAGTGTT..............................................	23	3	1	1.00	1	0	0	0	0	1	0
...........................ATAGGAATGCTGCGACGTT..........................................................................................................	19	1	1	1.00	1	1	0	0	0	0	0
...................................................................................AATCACAGCCAGCTTTGAGTGT...............................................	22	3	1	1.00	1	0	0	1	0	0	0
...................................................................................TATCACAGCCAGCTTTATGAG................................................	21	2	1	1.00	1	0	1	0	0	0	0
...................................................................................TATCACAGCCAGCTTTAAGACA...............................................	22	3	1	1.00	1	0	0	1	0	0	0
...................................................................................TAGCACAGCCACCTTTGAGGGC...............................................	22	3	1	1.00	1	0	0	1	0	0	0
...................................................................................TATCACAGCCAGCTTTGAGAGCGT.............................................	24	0	1	1.00	1	0	0	0	1	0	0
...................................................................................TATCACAGCCAGCTTTGAGCACT..............................................	23	3	2	1.00	2	1	0	1	0	0	0
...................................................................................TATCACAGCCAGCTTTGAGAGTAC.............................................	24	3	1	1.00	1	0	0	1	0	0	0
...................................................................................TATCACAGCCAGCTTTTAGAGG...............................................	22	2	1	1.00	1	0	0	0	0	1	0
...................................................................................TATCACAGCCAGTTTTAAGAGG...............................................	22	3	1	1.00	1	0	0	1	0	0	0
...................................................................................TATCACAGCCAGCTTTGAGTC................................................	21	2	2	1.00	2	1	0	1	0	0	0
...................................................................................TATCACTGCCAGCTTTGAGTCC...............................................	22	3	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACTGCCAGCTTTGAGTGT...............................................	22	3	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCGGCTTTGTGGGC...............................................	22	3	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGAATGT...............................................	22	3	2	1.00	2	2	0	0	0	0	0
...................................................................................TATCACAGTCAGCTTTGAGTG................................................	21	2	1	1.00	1	1	0	0	0	0	0
...................................................................................TATTACAGCCAGCTTTGAGGG................................................	21	2	3	1.00	3	3	0	0	0	0	0
...................................................................................TATCACGGCCAGCTTTGAGTGT...............................................	22	3	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGAGAGGCT.............................................	24	2	1	1.00	1	0	0	1	0	0	0
...................................................................................TATCACAGCCAGCTTTGACACC...............................................	22	2	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCAAAGACAGCTTTGAGGGC...............................................	22	3	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTACGAGCT..............................................	23	3	1	1.00	1	0	1	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGAGTTT...............................................	22	3	2	1.00	2	2	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTGGTGAGG...............................................	22	3	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGAGGGCT..............................................	23	2	1	1.00	1	0	0	1	0	0	0
...................................................................................TATCACAGACAGCTTTGAGAG................................................	21	1	1	1.00	1	0	0	0	1	0	0
...................................................................................TATCACAGCCAGCTTTGAGGGCAC.............................................	24	3	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGTGTG................................................	21	2	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGAGGTCGA.............................................	24	3	1	1.00	1	0	1	0	0	0	0
...................................................................................TATCACAACCACCTTTGAGGGC...............................................	22	3	1	1.00	1	1	0	0	0	0	0
.....................................................................................TCACAGCCAGCTTTGAGAG................................................	19	0	1	1.00	1	0	1	0	0	0	0
...................................................................................TATCACAGCCACCGTTGAGGGC...............................................	22	3	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGGGTGCG..............................................	23	2	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCGTTGAGAGC...............................................	22	1	1	1.00	1	0	0	0	0	1	0
...................................................................................TATCACAGCCAGCTTTGAGTCCC..............................................	23	3	2	1.00	2	0	0	1	0	1	0
...................................................................................TATCACCGCCAGCTTTGAGACT...............................................	22	3	1	1.00	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGCGGGA...............................................	22	3	4	0.75	3	2	0	1	0	0	0
...................................................................................TATCACAGCCACCTTTGAGTGG...............................................	22	3	4	0.75	3	2	0	1	0	0	0
...................................................................................TATCACAGCCAGCTGTGAGTGG...............................................	22	3	4	0.75	3	3	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTAAGTGG...............................................	22	3	4	0.75	3	2	0	1	0	0	0
...................................................................................TATCACAGCCAGTTTTGCGAGT...............................................	22	3	3	0.67	2	2	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGGGCAC...............................................	22	3	3	0.67	2	1	0	1	0	0	0
...................................................................................TATCACAGACAGCTTTGAGTGG...............................................	22	3	3	0.67	2	2	0	0	0	0	0
...................................................................................TAGCACAGCCAGCTTTGAGGG................................................	21	2	3	0.67	2	1	0	1	0	0	0
...................................................................................TATCACAGCCACCTTTGAGTAC...............................................	22	3	3	0.67	2	2	0	0	0	0	0
...................................................................................TATCACAGCCAGTTTTGAGTGG...............................................	22	3	3	0.67	2	1	0	0	0	1	0
...................................................................................TATTACAGCCAGCTTTGAGTGG...............................................	22	3	3	0.67	2	2	0	0	0	0	0
...................................................................................TATCACGGCCAGCTTTGAGGG................................................	21	2	3	0.67	2	2	0	0	0	0	0
...................................................................................TATCACAGCCAGCTATGAGTGG...............................................	22	3	3	0.67	2	2	0	0	0	0	0
...................................................................................TATCACAGCCAGGTTTGAGTGG...............................................	22	3	3	0.67	2	2	0	0	0	0	0
...................................................................................TATCACAGCCAGATTTGAGCTC...............................................	22	3	3	0.67	2	1	0	1	0	0	0
...................................................................................TATAACAGCCAGCTTTGAGTGG...............................................	22	3	3	0.67	2	2	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGAGTCA...............................................	22	3	3	0.67	2	0	0	2	0	0	0
...................................................................................TATCACAGCCAACTTTGAGACG...............................................	22	3	2	0.50	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGCGCAC...............................................	22	3	2	0.50	1	0	0	1	0	0	0
...................................................................................TTTCACAGCCCGCTTGGAGAG................................................	21	3	2	0.50	1	0	0	1	0	0	0
...................................................................................TATCACAGCCAGCCTTGAGTAC...............................................	22	3	2	0.50	1	1	0	0	0	0	0
...................................................................................TAGCACAGCCAGCTTTGAG..................................................	19	1	2	0.50	1	1	0	0	0	0	0
...................................................................................TAGCAGAGCCAGCTTTGAG..................................................	19	2	4	0.50	2	2	0	0	0	0	0
...................................................................................TATCACGGCCAGCTTTGAGT.................................................	20	2	2	0.50	1	1	0	0	0	0	0
...................................................................................TATCACAGCAAGCTTTGAGCTC...............................................	22	3	2	0.50	1	0	0	1	0	0	0
...................................................................................TATCACAGCCCGCTTTGAGGTC...............................................	22	3	2	0.50	1	0	0	0	0	1	0
...................................................................................TATCACAGCCAGCTTTGTTAGA...............................................	22	3	2	0.50	1	0	0	1	0	0	0
...................................................................................TAGCACAGCCCGCTTTGAGGGC...............................................	22	3	2	0.50	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGAGAACC..............................................	23	2	2	0.50	1	0	0	1	0	0	0
............................................CTCTTTAAAGTGGCGGGGGCGTG.....................................................................................	23	2	2	0.50	1	0	0	1	0	0	0
............................................CTCTTTAAAGTGGCGGGGGCG.......................................................................................	21	2	2	0.50	1	0	0	0	0	1	0
...................................................................................TATCACAGCAAGCTTTGAGGTC...............................................	22	3	2	0.50	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGATTGC...............................................	22	2	2	0.50	1	1	0	0	0	0	0
...................................................................................TATCACAGCCACCTTTGAG..................................................	19	1	2	0.50	1	0	0	1	0	0	0
...................................................................................TATCACAGCCAGCTTTGGGGGT...............................................	22	3	4	0.50	2	2	0	0	0	0	0
...................................................................................TATCACAGCCATCTTTGAGACG...............................................	22	3	2	0.50	1	0	0	1	0	0	0
...................................................................................CATCACAGTCAGCTTTGAG..................................................	19	2	2	0.50	1	0	0	0	0	1	0
...................................................................................TATCACAGCCGGCTTTGAGTAC...............................................	22	3	2	0.50	1	1	0	0	0	0	0
...................................................................................TATTACAGCCAGCTTTGAGTGT...............................................	22	3	2	0.50	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCCTTGAG..................................................	19	1	2	0.50	1	0	0	0	0	1	0
...................................................................................TATCACAGCCAGCTTTTACAC................................................	21	3	2	0.50	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGATCGCCTT............................................	25	3	2	0.50	1	1	0	0	0	0	0
...................................................................................TAGCACAGCCAGCTTTGTGGGC...............................................	22	3	2	0.50	1	1	0	0	0	0	0
...................................................................................TATCAAAGCCAGCTTTGAGACG...............................................	22	3	2	0.50	1	0	0	0	0	1	0
...................................................................................TCTCACAGCCAGCTTTGAGCAC...............................................	22	3	2	0.50	1	1	0	0	0	0	0
...................................................................................TATCACAGCGAGCTGTGAGAGG...............................................	22	3	2	0.50	1	1	0	0	0	0	0
...................................................................................TATCACACCCAGCTTTGAG..................................................	19	1	2	0.50	1	1	0	0	0	0	0
...................................................................................TAGCACAGCCAGCTTTGAGACT...............................................	22	3	2	0.50	1	0	0	1	0	0	0
...................................................................................TATCACTGCCAGCTTTGAG..................................................	19	1	2	0.50	1	0	1	0	0	0	0
...................................................................................TATCACAGCCAGCTTGGAGAAT...............................................	22	3	2	0.50	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTTAGAGTAC...............................................	22	3	2	0.50	1	0	0	1	0	0	0
.....................................................................................TCACAGCCAGCTTTGATAGCTA.............................................	22	3	2	0.50	1	0	0	1	0	0	0
...................................................................................TATCAAAGCCAGCTTTGAGGCC...............................................	22	3	2	0.50	1	1	0	0	0	0	0
...................................................................................TATCACAGCCGGCTTTGAG..................................................	19	1	2	0.50	1	0	1	0	0	0	0
...................................................................................TATCACAGCCAGCTTTGAGCC................................................	21	2	2	0.50	1	1	0	0	0	0	0
...................................................................................TATCACAGCCAGCTGTGAGCAC...............................................	22	3	2	0.50	1	1	0	0	0	0	0

Species	Coordinate	ID	Type	Alignment
droPer2	scaffold_1:5401809-5401960 +	dpe_158	candidate-rescued	GAAGGAGTGAAGATCCCATGGGATAC------T----------------ATAGGAATGCTGCGACGCTCTTTAAAGTGGCGGTGACGTGTTGGT-AATAATATTCATATCACAGCC-AGCTTTGA-GAGCGTTGCGGCCCTTCTGAA--ATATGCGCCT----CATTGGGG-TTTATTCGAA-C-A
dp5	4_group3:3919013-3919169 +	dps-mir-2b-1	Known_mirbase	GAAGGAGTTAAGATCCCATGGGATAC------T----------------ATAGGAAAGCTGCGACGCTCTTTAAAGTGGCGGTGACGTGTTGGT-AATAATATTCATATCACAGCC-AGCTTTGAGGAGCGTTGCGGCCCTTCTGAAA-ATATGCGCCT----CATTGGGGGTTTATTCGAATCAA
droAna3	scaffold_12916:6006027-6006142 +	dan_7	confident	AGGGTTTTGAAGGA-------------------TACAGATT------TTTTTAGGGAACTGCGACCCTCCTTAAAGTGGCGGTGACATGTAGCT-TTC-ATATTCATATCACAGCTTTGCTTTCAGGAGCGTTGAGGTTTCTC-------------------------------------------
droBip1	scf7180000396568:838852-838956 -			AAGA------GAAC---------------------------GA---GATTTTTGGAAACTGCGACACTCCTTAAAGTGGCGGTGACATGTAGCT-T-TTATATTCATATCACAGCTTTGCTTTCAGGAGCGCTGAGGTTTCTC-------------------------------------------
droKik1	scf7180000302570:484432-484602 -			TAATATTTAAATATATTAAAATATTTTATAAT-TATT----AAAAA--GGTGTAAAGACTGCAACTGTCTTCAAAGTGGCCGTGAAATGTGGTTTTACTATATTCATATCACAGCC-AGCTTTGAGGAGCGTTGCAGTTTTTGTGGCAACAATGAGTTA----TTTTAGGG-GATTTTTAAA-T-A
droFic1	scf7180000453925:954507-954620 -			GGTTCGGTGAAAAT---------------------------CA---CAGAAGTGAAAACTGCAACTGTCTTCAAAGTGGCGGTGAAATGTTGTT-AACAATATTCATATCACAGCC-AGCTTTGAGGAGCGTTGCGGTCTTTCTGA----------------------------------------
droEle1	scf7180000491338:639694-639807 +			TC---CATTAAAAC-------------------TATAAATT------ATATGTAAAAACTGCAACTGTCTTCAAGGTGGCGGTGACATGTTGTT-AACAATATTCATATCACAGCC-AGCTTTGAGGAGCGTTGCGGTCTTTTT------------------------------------------
droRho1	scf7180000770617:91-201 +			GCTTCAATTAAAGT----------------------------A---CAAATGTGAAAACTGCAACTGTCTTCAAGGTGGCGGTGACATGTTGTT-AACAATATTCATATCACAGCC-AGCTTTGAGGAGCGTTGCGGTCTTTCT------------------------------------------
droBia1	scf7180000301500:407906-408021 +			G-TTCCTTAAGAAT-------------------TATAAAATCA----AAATGTGAGAACTGCAACTGGCTTCAAAGTGGCGGTGAAATGTTGTC-AACAATATTCATATCACAGCC-AGCTTTGAGGAGCGTTGCGGTTTTT--------------------------------------------
droTak1	scf7180000414394:85813-85934 +			AC--CCATAAAAAT---------------------------GA---TAAATGTGAAAACTGCAACTGTCTTCAAGGTGGCCGTGAAATGTTGTT-CACAATATTCATATCACAGCC-AGCTTTGAGGAGCGTTGCGGTCTTTCTAAC----------CTG------------------CTAA-T-A
droEug1	scf7180000409461:268305-268415 -			AAAGAAGTGAAGGT---------------------------------GAATGTGAGAACTGCAACTGTCTTCAAGGTGGCGGTGAAATGTTGTT-AACAATATTCATATCACAGCC-AGCTTTGAGGAGCGTTGCGGTCTTTCTAA----------------------------------------
dm3	chr2L:8258592-8258721 -	dme-mir-2b-1	Known_mirbase	AGTTTCGTGCAAAT---------------------------CAAAA--TAACTAAAAACTTCAACTGTCTTCAAAGTGGCAGTGACATGTTGTC-AACAATATTCATATCACAGCC-AGCTTTGAGGAGCGTTGCGGTTTTTCTCGT----------CCGGCGACT-------------TAA-G-G
droSim2	2l:7986354-7986465 -	dsi-mir-2b-1	Known_mirbase	CGTTTCGTGCAAAT---------------------------CAAAA--GAACTGAAAACTTCAACTGTCTTCAAAGTGGCGGTGACATGTTGTC-AACAATATTCATATCACAGCC-AGCTTTGAGGAGCGTTGCGGTTTTTC-------------------------------------------
droSec2	scaffold_3:3755261-3755373 -	dse-mir-2b-1	Known_mirbase	CATTTCGTGCAAAT---------------------------CAAAA--GAACTGAAAACTTCAACTGTCTTCAAAGTGGCGGTGACATGTTGTC-AACAATATTCATATCACAGCC-AGCTTTGAGGAGCGTTGTGGTTTTTCT------------------------------------------
droYak3	2L:10894235-10894350 -	dya-mir-2b-1	Known_mirbase	GACTGCGTGCAAAT---------------------------GG---AAAAAGTGAAAACTTCAACTGTCTTCAAAGTGGCGGTGACATGTTGTC-AACAATATTCATATCACAGCC-AGCTTTGAGGAGCGTTGCGGTTTTTCTCGC----------C----------------------------
droEre2	scaffold_4929:17167542-17167658 -	der-mir-2b-1	Known_mirbase	GGATTCGTGCAATT---------------------------CG---CAATAGTGAAAACTTCAACTGTCTTCAAAGTGGCGGTGACATGTTGTC-AGCAATATTCATATCACAGCC-AGCTTTGAGGAGCGTTGCGGTTTTTCTCGC----------CC---------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droPer2

GAAGGAGTGAAGATCCCATGGGATAC------T----------------ATAGGAATGCTGCGACGCTCTTTAAAGTGGCGGTGACGTGTTGGT-AATAATATTCATATCACAGCC-AGCTTTGA-GAGCGTTGCGGCCCTTCTGAA--ATATGCGCCT----CATTGGGG-TTTATTCGAA-C-A	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
..........................................................................................................TATCACAGCC-AGCTTTGA-G...........................................................	19	2	158.50	317	0	213	2	40	56	6
..........................................................................................................TATCACAGCC-AGCTTTGA-............................................................	18	5	25.20	126	6	17	13	16	74	0
..........................................................................................................TATCACAGCC-AGCTTTGA-GA..........................................................	20	1	22.00	22	0	20	0	0	2	0
..........................................................................................................TATCACAGCC-AGCTTTGA-GAG.........................................................	21	1	18.00	18	0	9	0	5	3	1
..........................................................................................................TATCACAGCC-AGCTTTGA-GT..........................................................	20	2	16.00	32	0	12	0	11	7	2
..........................................................................................................TATCACAGCC-AGCTTTGA-GAGG........................................................	22	1	11.00	11	0	0	1	0	10	0
.........................C------T----------------ATAGGAATGCTGCGACG........................................................................................................................	19	1	10.00	10	0	1	2	3	3	1
..........................................................................................................TATCACAGCC-AGCTTTGA-GACG........................................................	22	2	6.50	13	0	0	0	6	7	0
..........................................................................................................TATCACAGCC-AGCTTTGA-GAA.........................................................	21	2	6.00	12	0	5	3	4	0	0
...........................................................................................................ATCACAGCC-AGCTTTGA-G...........................................................	18	2	6.00	12	0	12	0	0	0	0
................................T----------------ATAGGAATGCTGCGACG........................................................................................................................	18	1	6.00	6	1	0	1	1	3	0
..........................................................................................................TATCACAGCC-AGCTTTGA-GAGCG.......................................................	23	1	5.00	5	0	1	2	0	1	1
..........................................................................................................TATCACAGCC-AGCTTTGA-GAGC........................................................	22	1	5.00	5	0	2	1	1	1	0
..........................................................................................................TATCACAGCC-AGCTTTGA-A...........................................................	19	5	3.60	18	0	5	0	3	9	1
..........................................................................................................TATCACAGCC-AGCTTTGA-GTCT........................................................	22	2	3.50	7	0	0	1	0	6	0
.......................TAC------T----------------ATAGGAATGCTGCGACG........................................................................................................................	21	1	3.00	3	0	0	2	0	1	0
..................................................................CTCTTTAAAGTGGCGGTGACGTG.................................................................................................	23	1	3.00	3	0	3	0	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGA-GTT.........................................................	21	2	3.00	6	0	2	0	0	4	0
..........................................................................................................TATCACAGCC-AGCTTTGA-GCT.........................................................	21	2	2.50	5	0	1	0	0	4	0
..........................................................................................................TATCACAGCC-AGCTTTGA-GAAA........................................................	22	2	2.50	5	0	2	0	1	2	0
..........................................................................................................TATCACAGCC-AGCTTTGT-............................................................	18	5	2.40	12	0	0	0	1	11	0
..........................................................................................................TATCACAGCC-AGCTTTGA-GAGT........................................................	22	1	2.00	2	0	0	0	0	1	1
............................................................................................................TCACAGCC-AGCTTTGA-GAGCT.......................................................	21	1	2.00	2	0	1	0	0	1	0
........................AC------T----------------ATAGGAATGCTGCGACG........................................................................................................................	20	1	2.00	2	0	0	0	0	1	1
..........................................................................................................TATCACAGCC-AGCTTTGA-GAGA........................................................	22	1	2.00	2	0	1	0	1	0	0
..........................................................................................................TATCACAGCC-AGCTTTGA-GCCT........................................................	22	3	1.67	5	0	0	0	1	4	0
..........................................................................................................TATCACAGCC-AGCTTTGA-GACT........................................................	22	1	1.00	1	0	0	0	1	0	0
..........................................................................................................TATCACAGCC-AGCTTTGA-GAAT........................................................	22	2	1.00	2	0	0	0	1	1	0
.....................GATAC------T----------------ATAGGAATGCTGCGACG........................................................................................................................	23	1	1.00	1	0	0	0	0	0	1
..........................................................................................................TATCACAGCC-AGCTTTGA-GAGCTC......................................................	24	1	1.00	1	0	0	0	0	1	0
...........................................................................................................ATCACAGCC-AGCTTTGA-GA..........................................................	19	1	1.00	1	0	1	0	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGA-GAGGT.......................................................	23	1	1.00	1	0	0	0	0	1	0
..................................................................CTCTTTAAAGTGGCGGTGACGT..................................................................................................	22	1	1.00	1	0	1	0	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGA-GC..........................................................	20	2	1.00	2	0	2	0	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGA-GACA........................................................	22	1	1.00	1	0	0	0	1	0	0
..........................................................................................................TATCACAGCC-AGCTTTGA-GAGCC.......................................................	23	1	1.00	1	0	0	0	1	0	0
..........................................................................................................TATCACAGCC-AGCTTTGA-GAGCGT......................................................	24	1	1.00	1	0	0	0	0	0	1
..........................................................................................................TATCACAGCC-AGCTTTGA-GAGTAC......................................................	24	1	1.00	1	0	0	0	1	0	0
..........................................................................................................TATCACAGCC-AGCTTTGA-GTC.........................................................	21	2	1.00	2	0	0	0	1	1	0
..........................................................................................................TATCACAGCC-AGCTTTGA-GTTT........................................................	22	2	1.00	2	0	0	0	0	2	0
............................................................................................................TCACAGCC-AGCTTTGA-GAG.........................................................	19	1	1.00	1	0	1	0	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGA-GTCA........................................................	22	3	0.67	2	0	0	0	2	0	0
..........................................................................................................TATCACAGCC-AGCTTTGA-GCC.........................................................	21	2	0.50	1	0	0	0	0	1	0

dp5

GAAGGAGTTAAGATCCCATGGGATAC------T----------------ATAGGAAAGCTGCGACGCTCTTTAAAGTGGCGGTGACGTGTTGGT-AATAATATTCATATCACAGCC-AGCTTTGAGGAGCGTTGCGGCCCTTCTGAAA-ATATGCGCCT----CATTGGGGGTTTATTCGAATCAA	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
..........................................................................................................TATCACAGCC-AGCTTTGAGGAG.........................................................	22	2	141011.50	282023	221	131964	16051	16037	33498	46183	37078	292	481	218
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGC........................................................	23	2	120216.50	240433	11	54195	88289	25638	41965	14338	14904	117	147	829
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCG.......................................................	24	2	88829.00	177658	8	25521	18115	3240	83378	12330	33875	204	160	827
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGT......................................................	25	1	23806.00	23806	1	3319	2131	522	8071	1640	8029	31	26	36
..........................................................................................................TATCACAGCC-AGCTTTGAGGA..........................................................	21	2	23714.50	47429	7	32954	1910	2850	5240	2912	1369	52	114	21
..........................................................................................................TATCACAGCC-AGCTTTGAGG...........................................................	20	2	9408.50	18817	4	16766	506	1363	6	50	31	14	67	10
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGT........................................................	23	2	4727.50	9455	1	4283	645	1221	319	962	1997	5	19	3
...........................................................................................................ATCACAGCC-AGCTTTGAGGAG.........................................................	21	2	3647.50	7295	0	7029	59	166	10	15	15	0	1	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGA........................................................	23	2	2788.50	5577	2	3415	958	309	368	278	233	4	5	5
...........................................................................................................ATCACAGCC-AGCTTTGAGGAGC........................................................	22	2	1957.00	3914	0	3126	374	369	17	17	11	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAA.........................................................	22	2	1889.00	3778	0	3080	187	75	106	265	52	7	5	1
..........................................................................................................TATCACAGCC-AGCTTTGAGGAC.........................................................	22	2	1212.50	2425	4	136	1610	603	13	46	13	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAAA........................................................	23	2	1207.50	2415	0	2273	62	9	28	13	28	0	2	0
...........................................................................................................ATCACAGCC-AGCTTTGAGGAGCG.......................................................	23	2	966.00	1932	0	1764	64	27	40	6	31	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCA.......................................................	24	2	907.00	1814	0	369	251	62	637	116	373	4	0	2
...........................................................................................................ATCACAGCC-AGCTTTGAGGA..........................................................	20	2	897.00	1794	0	1738	8	46	2	0	0	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCT.......................................................	24	4	823.00	3292	0	397	717	167	1131	232	643	2	2	1
..........................................................................................................TATCACAGCC-AGCTTTGAGGT..........................................................	21	2	784.00	1568	1	584	9	136	32	367	437	0	2	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGTT.....................................................	26	1	669.00	669	0	211	46	11	91	45	257	5	1	2
..........................................................................................................TATCACAGCC-AGCTTTGAG............................................................	19	2	510.50	1021	0	901	30	35	7	27	15	0	6	0
..............................................................................................................ACAGCC-AGCTTTGAGGAGCG.......................................................	20	2	500.00	1000	0	26	7	3	696	106	161	1	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCC.......................................................	24	2	495.50	991	0	51	524	98	182	26	106	0	4	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGC......................................................	25	2	470.50	941	0	72	473	101	172	32	90	0	0	1
..............................................................................................................ACAGCC-AGCTTTGAGGAG.........................................................	18	2	466.00	932	1	128	3	12	251	353	182	1	1	0
...........................................................................................................ATCACAGCC-AGCTTTGAGG...........................................................	19	2	464.50	929	0	909	5	15	0	0	0	0	0	0
............................................................................................................TCACAGCC-AGCTTTGAGGAGC........................................................	21	2	423.50	847	0	159	124	136	362	46	20	0	0	0
............................................................................................................TCACAGCC-AGCTTTGAGGAG.........................................................	20	2	384.00	768	0	320	19	75	207	117	30	0	0	0
............................................................................................................TCACAGCC-AGCTTTGAGGAGCG.......................................................	22	2	370.50	741	0	68	21	19	561	43	29	0	0	0
..............................................................................................................ACAGCC-AGCTTTGAGGAGC........................................................	19	2	306.50	613	0	58	22	23	319	94	92	2	0	3
..........................................................................................................TATCACAGCC-AGCTTTGAGGAT.........................................................	22	2	290.50	581	1	359	35	64	42	57	22	0	1	0
...........................................................................................................ATCACAGCC-AGCTTTGAGGAGCGT......................................................	24	1	233.00	233	0	210	7	4	6	1	5	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGTTT....................................................	27	1	225.00	225	0	59	7	1	12	12	133	0	0	1
...........................................................................................................ATCACAGCC-AGCTTTGAGGAGT........................................................	22	2	122.00	244	0	226	3	14	1	0	0	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGG........................................................	23	2	116.00	232	0	41	48	32	108	3	0	0	0	0
.............................................................................................................CACAGCC-AGCTTTGAGGAGC........................................................	20	2	116.00	232	0	77	48	83	5	4	15	0	0	0
...........................................................................................................ATCACAGCC-AGCTTTGAGGAGA........................................................	22	2	114.00	228	0	216	6	6	0	0	0	0	0	0
.............................................................................................................CACAGCC-AGCTTTGAGGAG.........................................................	19	2	112.50	225	0	158	4	30	4	13	16	0	0	0
..............................................................................................................ACAGCC-AGCTTTGAGGAGCGT......................................................	21	1	110.00	110	0	4	0	1	64	15	26	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAAAA.......................................................	24	2	107.50	215	0	205	3	0	2	0	5	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGAA.......................................................	24	2	105.00	210	0	165	27	6	2	4	1	3	2	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGTT.......................................................	24	4	94.25	377	0	144	24	44	14	28	122	1	0	0
...........................................................................................................ATCACAGCC-AGCTTTGAGGAA.........................................................	21	2	86.50	173	0	172	0	1	0	0	0	0	0	0
............................................................................................................TCACAGCC-AGCTTTGAGGAGCGT......................................................	23	1	84.00	84	0	10	4	3	55	3	9	0	0	0
...........................................................................................................ATCACAGCC-AGCTTTGAGGAAA........................................................	22	2	66.50	133	0	132	1	0	0	0	0	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGTT.........................................................	22	2	65.00	130	0	84	0	25	1	13	7	0	0	0
.........................................................................................................ATATCACAGCC-AGCTTTGAGGAG.........................................................	23	2	62.50	125	0	124	1	0	0	0	0	0	0	0
............................................................................................................TCACAGCC-AGCTTTGAGGA..........................................................	19	2	58.00	116	0	77	1	10	21	6	1	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGG..........................................................	21	3	47.67	143	0	31	31	25	45	9	2	0	0	0
.............................................................................................................CACAGCC-AGCTTTGAGGAGCG.......................................................	21	2	47.50	95	0	37	9	8	7	8	26	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGC..........................................................	21	2	45.00	90	0	15	3	36	13	20	3	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGG......................................................	25	2	44.50	89	0	12	33	6	34	2	2	0	0	0
............................................................................................................TCACAGCC-AGCTTTGAGGAGCT.......................................................	22	4	42.75	171	0	3	24	14	90	33	7	0	0	0
..................................................................CTCTTTAAAGTGGCGGTGACGTG.................................................................................................	23	1	40.00	40	0	15	22	2	0	0	1	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGT...........................................................	20	2	37.50	75	0	50	0	2	0	17	6	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGTA.....................................................	26	1	37.00	37	0	9	2	1	7	5	10	1	2	0
..........................................................................................................TATCACAGCC-AGCTTTGAGA...........................................................	20	2	32.50	65	0	58	2	2	1	1	0	0	1	0
..........................................................................................................TATCACAGCC-AGCTTTGA.............................................................	18	5	31.40	157	0	53	19	39	23	16	0	2	5	0
.........................................................................................................ATATCACAGCC-AGCTTTGAGGAGC........................................................	24	2	30.50	61	0	51	4	6	0	0	0	0	0	0
............................................................................................................TCACAGCC-AGCTTTGAGG...........................................................	18	2	29.50	59	0	49	0	10	0	0	0	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGTTTT...................................................	28	1	29.00	29	0	7	1	0	0	0	21	0	0	0
.........................C------T----------------ATAGGAAAGCTGCGACG........................................................................................................................	19	1	28.00	28	0	7	4	0	1	1	0	0	0	15
................................................................................................................AGCC-AGCTTTGAGGAGCG.......................................................	18	2	27.00	54	0	16	0	1	24	8	5	0	0	0
...............................................................................................................CAGCC-AGCTTTGAGGAGCG.......................................................	19	2	25.50	51	0	23	1	2	16	2	7	0	0	0
...............................................................................................................CAGCC-AGCTTTGAGGAGC........................................................	18	2	25.00	50	0	36	6	3	4	0	1	0	0	0

droAna3

AGGGTTTTGAAGGA-------------------TACAGATT------TTTTTAGGGAACTGCGACCCTCCTTAAAGTGGCGGTGACATGTAGCT-TTC-ATATTCATATCACAGCTTTGCTTTCAGGAGCGTTGAGGTTTCTC-------------------------------------------	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
............................................................................................................TCACAGCTTTGCTTTCAGGAGCG.......................................................	23	1	10171.00	10171	34	88	156	363	1072	8458
..........................................................................................................TATCACAGCTTTGCTTTCAGGAGCG.......................................................	25	1	5794.00	5794	30	162	202	270	473	4657
..........................................................................................................TATCACAGCTTTGCTTTCAGGA..........................................................	22	1	2573.00	2573	231	56	18	281	15	1972
..........................................................................................................TATCACAGCTTTGCTTTCAGGAGC........................................................	24	1	2326.00	2326	22	558	64	133	50	1499
............................................................................................................TCACAGCTTTGCTTTCAGGAGCGT......................................................	24	1	1669.00	1669	13	14	58	70	216	1298
..........................................................................................................TATCACAGCTTTGCTTTCAGGAGCGT......................................................	26	1	1340.00	1340	8	4	19	78	141	1090
............................................................................................................TCACAGCTTTGCTTTCAGGAGC........................................................	22	1	898.00	898	6	56	17	62	12	745
..........................................................................................................TATCACAGCTTTGCTTTCAGGAG.........................................................	23	1	457.00	457	116	24	12	23	4	278
..........................................................................................................TATCACAGCTTTGCTTTCAGG...........................................................	21	1	313.00	313	228	17	1	2	0	65
............................................................................................................TCACAGCTTTGCTTTCAGGAGCGA......................................................	24	1	163.00	163	0	1	4	7	15	136
..........................................................................................................TATCACAGCTTTGCTTTCAG............................................................	20	1	163.00	163	38	0	0	3	4	118
...........................................................................................................ATCACAGCTTTGCTTTCAGGAGCG.......................................................	24	1	128.00	128	4	2	6	10	12	94
............................................................................................................TCACAGCTTTGCTTTCAGGAG.........................................................	21	1	121.00	121	28	3	1	6	2	81
..........................................................................................................TATCACAGCTTTGCTTTCAGGAA.........................................................	23	1	115.00	115	4	3	1	12	2	93
..................................................................CTCCTTAAAGTGGCGGTGACA...................................................................................................	21	1	96.00	96	17	2	0	0	6	71
............................................................................................................TCACAGCTTTGCTTTCAGGAGCGTT.....................................................	25	1	93.00	93	1	1	2	3	17	69
............................................................................................................TCACAGCTTTGCTTTCAGGA..........................................................	20	1	89.00	89	13	1	1	5	0	69
............................................................................................................TCACAGCTTTGCTTTCAGGAGCT.......................................................	23	1	87.00	87	2	0	1	1	4	79
..........................................................................................................TATCACAGCTTTGCTTTCAGGAGCGA......................................................	26	1	83.00	83	1	1	4	10	3	64
..........................................................................................................TATCACAGCTTTGCTTTCAGGAGCT.......................................................	25	1	80.00	80	2	4	6	5	14	49
..........................................................................................................TATCACAGCTTTGCTTTCAGGT..........................................................	22	1	61.00	61	5	0	0	10	1	45
..........................................................................................................TATCACAGCTTTGCTTTCAGGAGCGTT.....................................................	27	1	60.00	60	0	1	1	1	7	50
...............................................TTTTTAGGGAACTGCGACC........................................................................................................................	19	1	52.00	52	14	19	0	2	1	16
...........................................................................................................ATCACAGCTTTGCTTTCAGGA..........................................................	21	1	41.00	41	18	0	0	1	0	22
...........................................................................................................ATCACAGCTTTGCTTTCAGGAGC........................................................	23	1	40.00	40	1	13	0	4	1	21
..........................................................................................................TATCACAGCTTTGCTTTCA.............................................................	19	1	35.00	35	2	0	0	18	0	15
..........................................................................................................TATCACAGCTTTGCTTTCAGGAGA........................................................	24	1	33.00	33	2	1	1	5	0	24
..........................................................................................................TATCACAGCTTTGCTTTCAGGAGT........................................................	24	1	32.00	32	5	1	0	4	5	17
............................................................................................................TCACAGCTTTGCTTTCAGGAGCGTTT....................................................	26	1	30.00	30	0	0	1	1	13	15
...........................................................................................................ATCACAGCTTTGCTTTCAGGAG.........................................................	22	1	28.00	28	13	2	0	0	0	13
..........................................................................................................TATCACAGCTTTGCTTTCAGGAGCA.......................................................	25	1	28.00	28	0	1	2	3	0	22
...........................................................................................................ATCACAGCTTTGCTTTCAGGAGCGT......................................................	25	1	26.00	26	1	0	1	0	4	20
............................................................................................................TCACAGCTTTGCTTTCAGGAGCA.......................................................	23	1	24.00	24	0	0	0	2	0	22
..................................................................CTCCTTAAAGTGGCGGTGA.....................................................................................................	19	1	19.00	19	5	0	0	0	1	13
.................................................................................................................GCTTTGCTTTCAGGAGCG.......................................................	18	1	18.00	18	0	0	0	3	3	12
..............................................................................................................ACAGCTTTGCTTTCAGGAGCG.......................................................	21	1	17.00	17	0	1	4	3	2	7
..........................................................................................................TATCACAGCTTTGCTTTCAGGAGCGTTT....................................................	28	1	17.00	17	0	0	1	1	5	10
..........................................................................................................TATCACAGCTTTGCTTTCAGGAT.........................................................	23	1	15.00	15	4	1	2	0	0	8
.............................................................................................................CACAGCTTTGCTTTCAGGAGCG.......................................................	22	1	15.00	15	2	0	0	1	4	8
............................................................................................................TCACAGCTTTGCTTTCAGGAGA........................................................	22	1	14.00	14	1	0	0	3	0	10
..........................................................................................................TATCACAGCTTTGCTTTCAGGAAA........................................................	24	1	13.00	13	0	1	2	1	1	8
............................................................................................................TCACAGCTTTGCTTTCAGGAGT........................................................	22	1	13.00	13	0	0	0	4	0	9
............................................................................................................TCACAGCTTTGCTTTCAGGAGCGG......................................................	24	1	13.00	13	0	0	0	0	3	10
..........................................................................................................TATCACAGCTTTGCTTTCAGGAGCGC......................................................	26	1	12.00	12	0	1	0	1	0	10
................................................................................................................AGCTTTGCTTTCAGGAGCG.......................................................	19	1	11.00	11	0	0	0	2	0	9
...........................................................................................................ATCACAGCTTTGCTTTCAGG...........................................................	20	1	11.00	11	10	0	0	0	0	1
..........................................................................................................TATCACAGCTTTGCTTTCAGT...........................................................	21	1	11.00	11	1	0	0	3	0	7
..................................................................CTCCTTAAAGTGGCGGTGACATG.................................................................................................	23	1	10.00	10	0	6	0	0	0	4
................................................TTTTAGGGAACTGCGACC........................................................................................................................	18	1	10.00	10	2	5	0	2	0	1
............................................................................................................TCACAGCTTTGCTTTCAGGAGCGC......................................................	24	1	10.00	10	0	1	1	0	0	8
..........................................................................................................TATCACAGCTTTGCTTTCAGGAGCC.......................................................	25	1	9.00	9	0	2	3	0	1	3
............................................................................................................TCACAGCTTTGCTTTCAGGAGCC.......................................................	23	1	7.00	7	0	1	1	1	0	4
........................................T------TTTTTAGGGAACTGCGACC........................................................................................................................	20	1	7.00	7	1	3	1	0	0	2
..........................................................................................................TATCACAGCTTTGCTTTCAGGAGCGTA.....................................................	27	1	6.00	6	0	0	0	0	1	5
............................................................................................................TCACAGCTTTGCTTTCAGG...........................................................	19	1	6.00	6	4	0	0	0	0	2
...........................................................................................................ATCACAGCTTTGCTTTCAG............................................................	19	1	6.00	6	6	0	0	0	0	0
.............................................................................................................CACAGCTTTGCTTTCAGGAG.........................................................	20	1	6.00	6	5	1	0	0	0	0
............................................................................................................TCACAGCTTTGCTTTCAGGAGCGTA.....................................................	25	1	5.00	5	0	0	1	0	1	3
..........................................................................................................TATCACAGCTTTGCTTTCAGGG..........................................................	22	1	5.00	5	0	0	1	0	0	4
..........................................................................................................TATCACAGCTTTGCTTTCAGA...........................................................	21	1	5.00	5	0	0	0	2	0	3
..............................................................................................................ACAGCTTTGCTTTCAGGAGCGT......................................................	22	1	4.00	4	0	0	0	2	1	1
.............................................................................................................CACAGCTTTGCTTTCAGGAGCGTT.....................................................	24	1	4.00	4	1	0	0	0	0	3
..............................................................................................................ACAGCTTTGCTTTCAGGAGC........................................................	20	1	4.00	4	0	0	1	1	1	1
..........................................................................................................TATCACAGCTTTGCTTTCAGGAGCGTTG....................................................	28	1	3.00	3	0	0	0	0	0	3
.................................................................................................................GCTTTGCTTTCAGGAGCGT......................................................	19	1	3.00	3	0	0	0	0	0	3
...........................................................................................................ATCACAGCTTTGCTTTCAGGAGCGA......................................................	25	1	3.00	3	0	0	0	0	0	3
............................................................................................................TCACAGCTTTGCTTTCAGGAGCGAA.....................................................	25	1	3.00	3	0	0	0	0	0	3
..................................................................CTCCTTAAAGTGGCGGTGACT...................................................................................................	21	1	3.00	3	0	0	0	0	1	2
...........................................................................................................ATCACAGCTTTGCTTTCAGGAGCGTT.....................................................	26	1	3.00	3	0	0	0	0	0	3

droBip1

AAGA------GAAC---------------------------GA---GATTTTTGGAAACTGCGACACTCCTTAAAGTGGCGGTGACATGTAGCT-T-TTATATTCATATCACAGCTTTGCTTTCAGGAGCGCTGAGGTTTCTC-------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droKik1

TAATATTTAAATATATTAAAATATTTTATAAT-TATT----AAAAA--GGTGTAAAGACTGCAACTGTCTTCAAAGTGGCCGTGAAATGTGGTTTTACTATATTCATATCACAGCC-AGCTTTGAGGAGCGTTGCAGTTTTTGTGGCAACAATGAGTTA----TTTTAGGG-GATTTTTAAA-T-A	Size	Hit Count	Total Norm	Total
No Reads

droFic1

GGTTCGGTGAAAAT---------------------------CA---CAGAAGTGAAAACTGCAACTGTCTTCAAAGTGGCGGTGAAATGTTGTT-AACAATATTCATATCACAGCC-AGCTTTGAGGAGCGTTGCGGTCTTTCTGA----------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droEle1

TC---CATTAAAAC-------------------TATAAATT------ATATGTAAAAACTGCAACTGTCTTCAAGGTGGCGGTGACATGTTGTT-AACAATATTCATATCACAGCC-AGCTTTGAGGAGCGTTGCGGTCTTTTT------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droRho1

GCTTCAATTAAAGT----------------------------A---CAAATGTGAAAACTGCAACTGTCTTCAAGGTGGCGGTGACATGTTGTT-AACAATATTCATATCACAGCC-AGCTTTGAGGAGCGTTGCGGTCTTTCT------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droBia1

G-TTCCTTAAGAAT-------------------TATAAAATCA----AAATGTGAGAACTGCAACTGGCTTCAAAGTGGCGGTGAAATGTTGTC-AACAATATTCATATCACAGCC-AGCTTTGAGGAGCGTTGCGGTTTTT--------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droTak1

AC--CCATAAAAAT---------------------------GA---TAAATGTGAAAACTGCAACTGTCTTCAAGGTGGCCGTGAAATGTTGTT-CACAATATTCATATCACAGCC-AGCTTTGAGGAGCGTTGCGGTCTTTCTAAC----------CTG------------------CTAA-T-A	Size	Hit Count	Total Norm	Total
No Reads

droEug1

AAAGAAGTGAAGGT---------------------------------GAATGTGAGAACTGCAACTGTCTTCAAGGTGGCGGTGAAATGTTGTT-AACAATATTCATATCACAGCC-AGCTTTGAGGAGCGTTGCGGTCTTTCTAA----------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

dm3

AGTTTCGTGCAAAT---------------------------CAAAA--TAACTAAAAACTTCAACTGTCTTCAAAGTGGCAGTGACATGTTGTC-AACAATATTCATATCACAGCC-AGCTTTGAGGAGCGTTGCGGTTTTTCTCGT----------CCGGCGACT-------------TAA-G-G	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCG.......................................................	24	2	11779773.00	23559546	1	0	0	0	243	37	39	179	504	175	65	141	46	145	62	1	1	338	1	0	1833	1961	3092	0	1	251	21030	14	122	71	2079	1540	10	5	20	15544	12054	12305	7707	13460	2590	6915	14619	9514	1629	9472	8444	7042	11850	11423	14606	14305	3554	1246	117867	2127	56	84	20	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2894	2737	2345	1653	256	2274	749	9043	9108	433	2724	1709	327	359	1426	675	358	1594	2614	729	1074	129	249	1396	2323	3822	108	5434	6249	11205	7644	1577	2092	163	1261	3603	866	821	696	7	194	235	1	114	1	54	86	460	13	255	29	194	206	0	1	0	4	81	239	163	94	424	3	23609	14408	17973	55258	7122	20198	26879	22448	39446	18063	25217	31485	32615	27976	11377	21	39	43	1	9	15739	9497	12187	70461	15169	10724	643	731	0	470	33	14	943	1721	81	2220	138	435	28	502	173	412	34701	7680	126115	3533	2266	10993	6545	9999	19435	1078	187	304	3462	768	11652	41964	0	1	0	0	0	10169	13691	388	277	1045	427	96	195	66153	89640	48054	40429	66866	10074	21715	25803	9470	14792	11477	25598	12098	23281	16797	19352	172	140	20330	3	1	0	0	29958	26423	650	9482	24707	40480	53846	10966	55022	10651	23983	45982	8467	69577	15929	55224	62942	68844	48872	23766	35256	63724	103183	45785	25892	35230	7515	30618	36882	40611	63863	16648	15388	13926	40083	95389	51832	135174	46983	130601	46191	136919	42466	34196	80090	9413	67330	59545	52841	47134	70855	309247	120511	18767	16251	120715	8921	66671	121884	83638	191297	35919	119158	42555	36997	21840	494098	95683	132453	213287	711297	1305923	1791065	809882	153438	1039558	1346947	1582035	1243310	2041316	88807	153077	1016805	140523	134173	305808	298209	239691	668957	655755	241265	1001935	196763	40
..........................................................................................................TATCACAGCC-AGCTTTGAGGAG.........................................................	22	2	6703237.50	13406475	3	1	1	0	329	61	90	164	137	151	35	125	46	255	494	9	14	1867	1	0	4001	4495	8395	5073	2	375	31313	22	203	239	9800	7483	66	51	1797	20807	15268	28906	13051	23728	6802	14955	23078	15934	6325	20562	7149	11412	20466	17346	19402	22816	7694	33864	341534	2402	80	89	27	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8315	8455	6616	5360	877	1862	509	2157	2161	1501	3964	6733	301	320	813	1527	171	748	1669	1307	3523	152	207	2424	3430	13712	246	8574	15671	24694	39227	12514	16713	401	767	1113	654	3250	1716	264	3352	6230	41	2965	20	1753	2692	13736	236	3385	315	3286	2945	1	1	6	12	452	447	220	114	685	0	32800	30742	25375	50206	31356	20588	18007	23207	16951	15767	33432	27361	25711	29657	18118	14	21	55	3	7	20631	12153	11885	18739	14006	9596	8647	10107	0	6834	55	22	7481	8662	268	10675	219	6815	46	8010	511	501	3195	10010	160186	1345	21714	18176	22487	25923	17644	220	48	53	12384	555	20897	18880	1	1	2	1	0	8013	22600	119	23	226	69	13	32	36431	34436	25120	35580	91734	12818	15331	46299	29694	39829	36472	52207	42245	43264	48192	16825	19	16	40992	4	2	0	0	10103	10100	3588	16963	39567	65983	61289	20187	61549	24875	60749	77189	21863	37315	35994	33067	59579	57496	28367	23678	29805	51477	71880	21754	32309	35562	19014	106689	31335	42860	108305	44505	26711	24781	141784	373170	143808	412321	164602	502003	97982	309107	67815	62750	63270	10750	93752	90775	71617	65308	109645	25531	11290	11447	6775	32962	5201	59348	114241	39434	92898	32480	40100	26814	20608	18118	488249	134838	62231	154420	736853	133790	395356	164552	27581	184942	227481	212854	123472	413507	13604	39629	236823	54611	41456	101279	76699	66506	127192	364051	470924	561772	511673	61
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGT......................................................	25	1	3840464.00	3840464	0	0	0	0	22	1	2	2	11	9	2	6	4	23	49	1	0	23	0	0	160	205	569	0	0	30	234	1	20	19	553	419	3	2	2	1846	1650	1095	913	1375	333	731	1706	1169	312	1015	1358	742	1280	877	1204	1221	330	0	0	0	9	46	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1180	1108	909	730	15	50	14	291	200	39	467	49	16	22	110	55	20	107	183	46	71	10	7	63	144	387	6	682	778	1163	245	80	41	15	72	82	40	61	24	7	50	91	0	30	0	19	36	197	2	109	18	84	76	0	0	0	1	5	13	6	10	37	0	2058	2234	2135	4307	1197	3077	2732	3163	4225	2344	4316	3261	3255	2289	978	3	3	5	0	0	1945	1324	1113	8164	608	1257	191	209	0	158	4	1	344	503	20	642	24	184	2	213	35	7	452	722	23196	57	854	1624	543	1450	2205	28	6	23	515	44	1875	8528	0	0	0	0	1	1091	1376	30	9	60	27	12	9	13468	16645	9406	4783	12257	1410	1919	1738	796	1242	1065	1506	984	1348	1553	2007	3	1	1536	1	1	0	0	2447	2099	76	705	4748	6312	10323	2026	13015	2745	6728	11127	1636	16375	2560	6697	10244	8630	9198	5307	3165	13382	9542	7735	2663	3069	881	2679	5926	5436	5544	1847	2502	3055	4686	14199	7504	22601	6304	21254	5196	18002	6796	11913	17979	1092	8099	11925	9101	9796	13785	11063	12127	3025	2303	30130	2084	5397	10864	8721	21785	6540	17338	7794	5907	1657	67721	12551	15096	27235	84162	254406	187369	154898	22210	111341	218040	190852	291433	239489	18983	40748	279973	35883	24017	47580	68696	43994	238387	101019	40673	217332	70046	45
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGC........................................................	23	2	3639224.00	7278448	6	1	2	0	190	33	36	80	184	167	36	64	37	199	142	10	18	460	3	0	1891	1475	3212	498	1	133	13262	12	116	109	2940	2372	17	24	14	14494	15022	15051	8686	13568	3922	9034	15235	8336	1976	8573	7723	6107	11359	9768	14935	13867	3902	1432	33272	660	78	83	22	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5423	5423	4354	3234	249	866	367	2776	2642	618	2296	2900	155	216	543	439	134	425	974	536	949	96	99	816	1428	3440	81	5686	7464	9151	15631	3347	3502	132	416	1017	571	1061	582	77	1236	1383	7	1114	6	739	523	2970	48	1200	143	1416	1192	2	4	21	17	164	225	127	92	231	0	9867	13994	8017	25248	14564	9109	10392	11336	11314	8708	10994	16232	18943	22049	10246	19	17	45	0	4	9563	7821	4978	10391	7552	8432	3062	4061	0	2795	33	15	2675	2686	122	3172	135	2274	83	2636	702	178	2345	5861	13060	178	7313	3594	4740	3123	8928	232	25	69	1588	238	4023	5864	3	5	4	12	7	4430	7715	24	19	98	48	11	38	38033	36519	22124	11916	22296	2072	2166	32704	15168	26031	23809	35506	18312	30925	32690	11150	162	105	12388	25	8	0	0	23795	20975	1519	6365	8986	34124	40601	11876	39490	10944	16729	30651	7407	36698	21080	41361	50792	45916	14795	16446	29143	37386	55329	25747	13823	16810	5241	29726	20169	21924	42818	11069	17958	9734	25148	67140	38668	111898	34863	106018	27253	86583	39655	29997	31704	5595	26732	16429	14959	14745	21208	27320	24127	9778	6288	43817	3407	31905	60132	24719	57777	13771	51171	16141	16692	14166	239027	70590	61071	113738	257494	171514	257490	142892	35202	174852	219868	209205	167207	285183	16043	35430	132081	47499	38385	102579	80358	63636	191164	314316	195003	424310	245048	37
..........................................................................................................TATCACAGCC-AGCTTTGAGGA..........................................................	21	2	301677.00	603354	0	0	0	0	103	18	8	10	6	17	10	17	5	45	28	1	7	212	2	0	71	94	324	364	0	6	756	6	34	35	1693	1422	10	10	268	279	392	575	335	414	97	453	871	471	258	495	95	360	276	877	894	427	232	349	1372	74	17	17	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1716	1726	1383	988	236	156	51	87	184	91	636	1588	41	46	136	288	27	135	808	251	640	17	11	247	383	2144	45	1515	2202	3331	8728	3028	3592	53	105	88	58	694	210	134	1758	2711	18	471	10	649	1268	5318	86	914	102	831	975	6	3	49	62	47	41	44	31	118	5	199	268	409	469	348	267	385	317	225	236	963	458	476	626	480	4	2	9	0	0	679	518	607	310	681	402	2693	3364	0	2111	7	6	1515	1579	40	1794	36	3427	13	4499	178	6	179	620	2658	23	4991	476	432	520	241	1	0	2	333	4	388	471	0	0	0	0	0	210	459	0	0	6	0	0	0	610	628	616	2310	5771	681	1211	12400	11813	8019	10900	13524	14550	10018	14546	2403	6	5	5872	28	5	0	0	241	234	126	1290	2836	9518	5689	3081	5524	2886	7900	9047	2923	2787	1801	2018	3760	3535	1105	1593	1848	2170	2333	496	1788	1426	1765	9910	1610	2658	11735	5171	1727	1816	2105	5528	1296	3653	2257	6896	1219	3860	1642	4576	4701	884	8671	4271	3541	3549	4398	504	399	403	188	821	201	872	1743	438	905	694	486	284	379	3327	24634	1408	691	1011	27182	1243	5146	3895	535	3021	3080	4789	2326	9069	331	1178	7720	1550	711	1381	1778	1527	2784	16456	25057	16980	21763	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCT.......................................................	24	4	104249.50	416998	0	0	0	0	0	0	0	1	1	4	0	0	0	3	0	0	2	2	0	0	14	19	76	2	0	1	654	0	0	0	0	0	0	0	3	85	159	84	163	66	88	105	230	115	19	64	214	77	205	97	150	143	85	33	4020	69	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	31	26	30	25	4	22	36	26	34	3	22	12	9	3	9	3	1	5	21	5	11	1	0	7	5	31	0	32	104	75	110	24	15	0	4	13	7	11	1	1	27	18	0	6	0	3	14	92	0	26	1	29	23	0	0	0	0	0	1	0	0	0	0	385	655	417	508	148	196	305	322	332	239	385	741	339	304	108	0	0	0	0	0	345	552	301	807	278	337	65	99	0	56	1	0	40	49	1	49	3	171	2	299	20	3	435	182	3559	57	170	122	77	116	191	8	0	5	34	4	98	298	0	0	0	0	0	104	152	0	2	10	4	0	0	1848	2633	1098	184	364	83	70	35	34	57	128	43	17	30	125	274	0	0	233	0	0	0	0	226	204	82	177	237	1402	972	219	984	129	366	1133	110	1111	188	552	1767	2851	312	821	400	2288	831	276	246	188	102	641	512	544	948	216	297	191	2327	7294	2781	6662	2379	8529	1207	4192	1819	1285	2637	403	3176	987	799	743	881	2592	1211	381	297	3019	230	1110	1619	1051	1838	670	2286	818	569	302	11002	2078	909	2371	14307	11510	35744	10553	1254	6210	15949	16632	12510	43039	779	2265	12681	2228	1244	2584	2800	2156	14322	4859	4028	59853	5692	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGT........................................................	23	2	102130.50	204261	0	0	0	0	9	1	0	3	5	4	0	1	0	8	15	0	0	27	1	0	24	28	256	31	0	6	1097	0	0	0	0	0	0	0	4	102	105	96	154	118	41	155	340	94	66	84	84	76	342	198	295	103	55	2	271	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	92	96	79	54	12	13	3	22	30	11	89	53	8	1	10	34	0	10	56	13	56	1	2	16	19	197	2	123	251	262	332	76	99	4	11	8	6	15	36	5	119	38	0	34	0	27	17	145	4	104	13	127	98	0	0	0	0	4	2	2	2	2	0	126	528	341	215	159	238	180	302	195	173	643	128	165	206	116	0	0	2	0	0	641	798	450	804	318	205	199	279	0	190	0	1	138	155	5	170	5	303	2	375	23	15	107	354	8854	52	425	1051	209	1033	212	1	0	1	313	12	1069	169	0	0	0	0	0	182	261	0	1	1	1	0	0	1584	1391	927	176	990	209	345	399	460	430	441	440	653	356	568	389	2	0	613	0	0	0	0	169	111	319	141	473	1118	594	237	611	305	922	836	231	610	499	468	222	345	248	436	440	610	581	226	240	224	214	1032	416	593	1046	403	283	313	1349	3429	1927	5338	1677	5268	899	2750	1588	1565	1102	223	977	1808	927	1038	1511	383	90	429	216	1138	240	459	777	783	1639	1325	1349	1484	1012	236	6678	8618	1137	3292	3625	3199	6218	3526	680	2330	4400	4236	3083	3930	304	2600	11520	2325	1349	1624	1653	1822	5206	3423	5010	4776	6523	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCA.......................................................	24	2	95800.00	191600	0	0	0	0	8	3	2	8	28	4	2	6	4	7	1	0	0	2	0	0	17	23	48	0	0	2	290	0	0	0	0	0	0	0	2	199	71	246	96	134	23	126	107	104	17	132	49	68	135	89	111	102	41	24	446	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	30	37	16	18	2	47	30	73	63	53	24	5	2	1	4	13	3	8	32	6	21	1	1	11	9	41	2	99	115	190	40	12	16	4	8	42	5	8	20	1	7	11	0	4	0	2	2	32	0	12	1	12	12	0	0	0	0	1	1	0	1	0	0	1004	1553	957	1221	587	341	257	457	342	279	160	304	223	284	90	0	0	0	0	0	168	93	117	402	151	93	24	42	0	29	1	0	16	25	1	39	1	21	0	18	1	1	74	94	1977	23	58	85	114	94	301	1	0	2	24	13	97	389	0	0	0	0	0	129	395	0	2	4	5	0	1	775	782	481	134	281	80	71	77	50	60	54	77	63	59	103	108	1	2	89	59	30	0	0	129	117	9	118	270	250	470	51	214	171	286	936	100	376	284	365	479	610	327	199	273	390	789	259	185	346	121	162	258	257	580	112	294	239	790	2365	1106	3057	862	2644	471	1476	549	437	576	170	318	688	527	545	685	2133	335	236	202	904	252	653	1237	1174	2568	564	613	623	370	149	2743	1698	1539	3432	6612	10423	5655	3295	1705	2572	7492	12469	4177	17739	2348	2021	11314	2307	2038	4725	5068	3600	2485	3057	1576	6336	3251	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGC......................................................	25	2	64205.50	128411	0	0	0	0	0	0	0	0	1	1	0	0	0	2	4	0	0	1	0	0	8	12	17	0	0	3	12	0	0	0	0	0	0	0	2	106	83	78	54	88	18	74	134	63	11	54	52	52	107	99	105	75	26	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	29	33	29	23	0	0	2	10	28	4	14	12	4	2	4	2	0	8	7	3	4	0	1	3	2	4	0	18	27	33	29	10	7	2	1	10	1	2	1	3	26	42	0	11	0	2	2	28	0	17	1	19	10	0	0	0	0	0	1	2	0	0	0	180	290	287	434	141	126	145	175	225	116	95	255	225	179	78	0	0	0	0	0	63	43	63	168	17	11	12	17	0	10	0	0	10	13	1	21	0	7	0	7	6	0	18	24	422	2	39	22	35	38	193	4	3	1	5	1	25	488	0	0	0	0	1	58	114	5	1	2	4	0	7	299	351	187	167	334	28	32	210	65	114	67	220	104	157	162	40	0	0	33	3	0	0	0	161	121	3	68	132	175	250	49	273	64	222	216	49	735	139	285	302	275	241	277	156	300	357	259	152	120	42	128	229	178	192	65	72	68	237	817	387	1211	311	1058	305	883	145	243	685	51	288	429	198	301	407	974	508	78	71	869	58	545	845	747	1245	194	1011	204	146	109	3373	702	829	1438	2769	5852	7443	5926	618	3216	5484	5830	6505	6978	465	628	9547	962	2097	1589	1651	1070	3780	2754	1836	11777	1997	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGA........................................................	23	2	59029.00	118058	0	0	0	0	17	3	4	9	26	11	4	1	3	7	1	0	0	9	0	0	32	28	103	6	0	6	396	0	0	0	0	0	0	0	16	119	72	173	129	121	23	304	727	90	61	118	43	63	396	489	715	72	36	2	381	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	87	98	76	59	8	38	9	21	35	24	19	43	4	4	6	18	3	3	47	19	35	0	0	11	9	220	2	62	101	156	233	53	56	7	5	11	3	11	21	5	75	75	0	96	0	74	67	406	10	79	8	61	83	0	0	0	2	11	10	0	0	3	0	83	428	345	376	258	202	114	313	109	164	339	168	148	237	71	0	1	1	0	0	253	158	193	237	173	145	196	336	0	171	0	0	122	178	6	163	4	222	1	255	10	0	33	141	2841	22	344	203	207	190	189	6	0	2	72	22	315	69	0	0	0	0	1	162	491	0	2	0	2	0	0	384	345	190	177	488	138	127	741	912	595	637	783	1731	697	1154	322	0	0	586	66	12	0	0	188	120	32	131	319	381	240	77	218	226	680	392	182	274	490	266	201	262	248	147	181	223	617	154	175	246	226	586	210	246	630	265	180	185	1405	3744	1548	4136	1544	4641	567	1692	514	610	348	114	556	1235	729	791	1170	521	80	233	87	383	238	503	617	682	1258	747	889	716	529	125	2001	1709	1237	3171	3239	1096	2376	873	298	1068	1763	2515	732	3041	502	960	5809	912	716	1088	871	1033	1357	1494	2139	2045	2783	0
............................................................................................................TCACAGCC-AGCTTTGAGGAGCGT......................................................	23	1	58630.00	58630	0	0	0	0	0	0	0	0	0	0	0	1	0	0	5	0	0	0	0	0	7	3	143	0	0	1	32	0	0	0	0	0	0	0	0	29	28	12	17	32	5	18	55	12	6	25	14	12	24	18	25	24	5	0	70	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	132	143	101	57	1	0	0	9	6	1	6	17	1	1	1	1	2	3	11	1	5	1	1	7	2	27	0	12	9	20	38	12	12	0	3	2	1	6	0	0	0	4	0	1	0	2	0	1	0	4	0	1	2	0	0	0	0	0	0	0	0	0	0	56	46	52	109	19	77	40	53	78	41	78	52	36	44	16	0	0	0	0	0	11	16	6	580	10	35	0	3	0	1	0	0	5	7	0	9	0	2	0	2	0	0	0	10	206	5	14	16	13	34	33	1	0	2	4	0	23	96	0	0	0	0	0	23	29	0	0	1	0	0	0	57	75	54	150	211	22	38	13	7	9	11	9	7	6	15	6	0	0	12	0	0	0	0	64	47	1	7	65	77	206	25	211	46	83	115	21	236	76	55	543	107	187	71	19	120	178	78	61	89	30	105	86	75	56	31	63	87	110	257	280	708	198	396	89	289	54	90	206	24	139	145	131	74	137	108	176	22	14	373	20	111	225	123	290	66	940	82	98	10	436	1745	182	425	1033	3731	5134	2202	841	864	2373	1167	2408	4708	267	315	1841	299	268	731	767	542	9251	800	1041	1502	464	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGTT.....................................................	26	1	52361.00	52361	0	0	0	0	1	0	0	0	1	0	0	0	0	2	0	0	0	1	0	0	0	3	12	0	0	0	0	0	3	3	23	25	0	0	0	19	23	15	16	11	0	17	29	24	23	13	31	12	25	15	30	11	8	0	0	0	1	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	30	26	13	21	0	0	0	0	5	1	15	0	1	0	4	6	0	2	7	1	7	0	0	0	3	21	0	30	35	35	14	3	4	0	3	2	1	2	1	0	12	4	0	6	0	3	4	28	1	15	2	11	15	0	0	0	0	0	0	4	0	0	0	14	57	61	37	3	79	48	64	71	23	356	30	31	22	11	0	0	0	0	0	3	0	0	22	6	4	23	15	0	13	0	0	22	27	4	23	3	34	3	37	28	0	11	2	51	0	49	66	8	65	57	2	0	0	21	2	120	236	0	0	0	0	0	15	26	3	3	1	1	0	0	191	274	137	24	342	29	28	27	22	36	24	18	18	15	40	93	0	0	33	0	0	0	0	52	28	2	30	130	175	244	29	354	58	162	344	55	205	32	72	64	62	89	269	92	443	193	150	41	70	12	92	179	227	162	49	59	100	97	242	138	406	108	374	73	222	355	345	494	56	249	511	312	401	544	203	180	114	77	1043	91	96	169	151	331	219	359	363	121	68	1735	182	118	557	809	2229	1664	1567	420	825	2354	1783	4150	1396	226	647	3490	460	224	266	603	456	3128	732	509	3683	1246	0
............................................................................................................TCACAGCC-AGCTTTGAGGAGCG.......................................................	22	2	42886.50	85773	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	2	0	7	2	25	0	0	2	18	0	0	0	0	0	0	0	0	15	23	9	9	13	4	4	21	3	1	11	3	5	13	4	8	9	5	14	25	0	9	10	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	16	12	19	8	4	16	8	51	60	4	17	25	6	1	11	4	2	13	17	4	9	3	4	9	17	60	1	29	42	58	67	17	18	0	3	29	7	8	5	0	2	3	0	1	0	0	0	7	0	2	0	0	0	0	0	0	0	0	0	0	0	2	0	31	22	14	30	11	14	16	22	28	16	22	17	26	18	2	0	0	0	2	0	28	22	20	240	39	37	1	2	0	1	0	0	0	5	0	7	0	4	0	13	1	0	48	7	325	18	4	13	12	17	27	2	2	0	5	4	39	73	0	0	0	0	0	8	25	2	0	1	2	0	0	61	51	76	44	77	22	29	20	22	14	4	9	12	25	15	1	0	0	10	1	0	0	0	55	103	2	24	106	222	524	39	436	54	89	316	21	460	76	243	485	443	143	117	136	353	559	190	122	201	15	138	119	165	370	41	80	70	183	409	445	972	331	570	243	697	265	110	267	12	251	157	161	111	194	183	326	16	13	299	7	228	503	253	517	72	463	89	97	86	1633	596	290	864	4103	3780	6778	3064	482	2475	4060	5045	3782	9856	482	181	2541	250	250	705	606	417	5735	2238	1464	5350	879	0
..............................................................................................................ACAGCC-AGCTTTGAGGAGCG.......................................................	20	2	33951.50	67903	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	66	61	53	0	0	11	531	0	1	0	0	0	0	0	13	285	258	271	113	266	128	105	227	265	31	264	337	165	262	142	217	371	109	4	0	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	78	104	86	54	0	0	0	1	8	0	0	2	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	3	4	1	1	2	0	0	0	0	1	0	0	0	1	0	0	0	1	0	3	0	0	0	0	0	0	0	0	0	0	0	4	1	3	0	408	330	384	765	94	296	494	404	659	383	453	691	491	311	238	0	2	8	0	0	146	78	86	512	124	93	7	5	0	0	0	0	6	7	1	19	2	3	0	2	0	0	265	39	667	26	18	148	81	100	200	32	3	4	38	5	63	229	0	0	0	0	0	37	99	2	0	5	5	0	0	180	396	180	211	244	61	169	346	98	282	139	353	113	301	198	4	0	0	4	0	0	0	0	221	170	7	77	213	412	395	95	440	113	167	428	62	664	139	532	581	662	429	240	350	537	868	345	251	303	49	271	330	335	564	143	140	150	393	805	433	400	395	440	356	379	377	75	129	8	308	397	378	278	494	874	655	47	22	559	22	73	380	83	355	56	158	52	42	147	506	103	92	212	1788	3967	2958	1898	320	2973	3372	1561	2222	2456	494	111	1118	164	237	572	313	369	827	781	242	172	45	0
...........................................................................................................ATCACAGCC-AGCTTTGAGGAGCG.......................................................	23	2	30527.50	61055	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	8	4	10	0	0	3	227	0	1	0	0	0	0	0	0	17	27	28	8	17	19	14	28	27	2	19	18	13	30	24	29	34	12	114	283	0	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	29	30	23	27	0	11	1	19	30	4	25	10	0	1	5	6	0	6	1	1	0	0	2	6	7	14	0	44	62	107	74	8	6	1	7	4	4	5	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	32	35	32	54	19	25	60	38	86	33	36	71	62	26	16	0	0	0	0	0	152	57	124	524	144	110	1	3	0	0	1	0	2	8	0	5	1	0	0	2	1	0	346	107	974	98	3	12	13	28	58	15	5	5	5	3	24	48	0	0	0	0	0	6	21	0	0	0	0	0	0	584	735	454	91	112	19	31	29	17	26	34	46	13	21	17	41	1	0	68	0	0	0	0	44	59	0	8	28	230	88	29	56	6	19	186	10	151	30	284	200	81	41	39	150	26	186	94	26	54	11	70	65	53	55	22	165	121	171	1222	189	1050	116	910	129	904	1145	69	88	48	125	54	47	59	85	615	505	45	23	418	19	129	517	123	497	43	493	50	48	359	3232	460	379	550	870	2744	5473	1334	788	1036	2369	1606	1405	4184	160	234	1408	166	198	550	665	432	5380	3247	693	433	600	1
..............................................................................................................ACAGCC-AGCTTTGAGGAG.........................................................	18	2	27476.00	54952	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	94	121	101	3	0	5	406	0	1	0	0	0	0	0	0	438	316	570	203	485	287	224	287	430	146	483	267	243	495	241	254	536	232	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	229	356	321	162	0	0	0	0	0	0	4	1	0	0	1	0	0	0	0	0	1	2	2	1	2	4	0	2	2	4	3	4	1	0	0	0	0	0	0	0	16	33	1	10	0	7	10	61	0	1	0	3	2	0	0	0	0	0	1	2	0	10	0	468	576	487	524	281	259	259	376	247	294	529	451	330	292	220	0	4	6	0	0	163	113	89	133	104	68	70	64	0	40	0	0	32	61	3	72	1	31	0	32	3	0	19	83	930	3	73	189	209	221	161	7	0	0	133	3	130	114	0	0	0	0	0	26	74	0	0	3	1	0	0	73	140	92	147	250	82	140	529	293	579	276	453	393	518	471	1	0	0	9	1	0	0	0	79	97	21	139	364	605	455	141	465	172	400	615	188	346	305	248	480	506	217	209	251	396	635	189	255	307	160	848	269	367	865	354	209	200	1107	868	1197	923	1337	1034	813	669	549	165	59	10	363	484	409	367	704	82	46	19	11	147	10	59	355	42	203	58	63	33	27	12	270	64	59	193	2088	487	925	450	50	638	661	287	293	827	74	41	328	90	114	295	124	157	246	572	311	42	47	0
..........................................................................................................TATCACAGCC-AGCTTTGAGG...........................................................	20	2	26714.50	53429	0	0	0	0	29	4	1	3	2	0	3	1	2	7	54	1	29	264	0	0	3	7	1	32	0	0	16	2	23	24	725	459	8	14	4242	11	12	25	12	15	7	9	18	8	8	10	2	6	14	9	21	21	7	12	30	55	2	3	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	804	765	666	505	94	21	7	52	62	23	180	690	15	15	55	111	10	30	299	63	172	8	5	46	55	850	33	344	397	802	2651	718	982	10	15	24	14	174	85	7	102	199	2	76	0	36	81	149	2	170	30	174	171	3	1	45	53	2	1	8	11	52	6	28	35	9	2	6	17	29	22	16	22	147	5	14	13	6	3	1	3	0	1	93	271	128	39	224	147	492	550	0	262	6	2	312	849	44	1138	34	385	12	402	180	0	33	190	216	0	1038	9	7	21	14	7	0	0	6	0	15	149	0	0	0	0	0	0	8	0	0	3	0	0	0	50	59	79	55	95	25	83	1497	2389	1186	1695	1438	2444	1192	2238	576	10	12	1009	1	2	0	0	26	23	37	13	68	97	13	15	18	40	194	90	23	123	145	350	115	165	127	56	60	56	30	14	54	49	42	208	40	128	205	97	58	19	19	73	3	31	12	55	8	44	14	130	198	5	386	94	59	113	457	44	5	18	11	122	43	8	17	2	13	15	28	11	22	815	1436	14	22	44	161	27	132	153	10	95	68	96	20	130	6	64	766	72	22	47	31	57	142	116	343	140	233	1
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCC.......................................................	24	2	25107.00	50214	0	0	0	0	1	1	0	0	0	2	0	0	0	0	0	0	0	3	0	0	4	5	11	0	0	0	38	0	0	0	0	0	0	0	0	30	33	36	36	23	29	130	44	25	3	17	51	12	54	47	87	28	26	3	295	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	1	5	2	0	6	6	17	7	5	12	3	2	2	0	6	0	0	4	3	5	0	0	1	0	7	0	22	18	17	14	7	8	0	1	1	1	4	8	0	5	3	0	0	0	2	1	4	0	2	1	2	3	0	0	0	0	0	0	0	0	0	0	70	116	67	88	40	44	57	60	48	45	35	99	32	51	22	0	0	0	0	0	20	40	42	75	71	25	2	6	0	4	0	0	0	3	0	4	1	0	0	1	2	1	79	7	261	4	13	5	11	28	39	1	0	1	3	1	12	40	0	0	0	0	0	27	17	2	1	1	0	0	0	110	96	51	27	49	14	16	41	17	23	33	45	18	19	41	21	0	0	38	1	0	0	0	51	40	3	27	33	119	88	13	79	31	31	132	22	122	32	86	345	572	35	147	57	387	122	59	28	42	17	58	41	53	102	21	58	11	171	942	222	666	156	610	112	325	136	152	251	14	224	146	110	92	292	645	376	103	67	261	48	519	253	694	494	226	499	139	87	83	1090	351	206	356	2565	1345	3164	686	209	588	1151	2202	1728	2406	97	286	1597	243	369	607	537	401	1702	1173	1705	6763	820	0
............................................................................................................TCACAGCC-AGCTTTGAGGAG.........................................................	20	2	19983.00	39966	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	9	10	7	58	0	0	9	0	0	0	0	0	0	0	6	2	0	3	0	2	0	1	0	0	0	2	1	3	1	2	3	3	4	2	11	19	8	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	7	4	3	10	6	0	8	13	7	24	46	4	2	8	5	1	3	12	5	29	2	5	17	17	100	2	63	92	130	195	83	126	1	5	9	2	26	5	0	17	24	0	34	0	12	1	193	0	11	0	7	14	0	0	0	0	0	0	0	0	0	0	3	4	2	0	1	2	5	9	1	0	2	1	0	0	0	0	0	0	0	0	12	19	44	1	25	17	16	11	0	9	0	0	11	28	0	25	0	17	0	10	0	0	0	19	86	1	56	4	11	11	7	0	0	0	3	0	53	7	0	0	0	0	0	5	37	0	0	0	0	0	0	11	6	8	5	36	5	4	15	12	13	3	10	11	21	20	0	0	0	9	0	0	0	0	17	22	1	49	148	328	493	56	451	80	271	467	74	235	96	117	280	342	64	94	103	306	347	60	132	161	25	376	92	123	590	68	106	69	479	1255	691	1955	769	1394	473	1150	321	206	178	7	262	198	166	132	281	9	19	6	4	49	3	152	342	61	161	35	71	27	26	9	1411	193	88	393	3711	294	1146	497	17	404	489	616	332	1630	42	38	559	49	25	164	105	77	527	1009	1959	2721	1995	8
..............................................................................................................ACAGCC-AGCTTTGAGGAGC........................................................	19	2	16950.50	33901	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	54	43	53	0	0	0	261	0	0	0	0	0	0	0	0	279	331	303	113	303	160	120	196	234	43	191	256	135	218	128	179	327	102	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	157	158	172	100	0	0	0	0	0	0	1	3	0	0	1	0	0	0	0	0	0	1	1	0	0	0	0	1	0	0	1	0	0	0	0	0	0	1	0	1	5	9	0	4	0	2	5	21	0	0	0	1	1	0	0	0	0	0	0	1	0	1	0	120	276	152	228	214	141	173	187	168	165	189	290	272	266	112	0	2	10	0	0	70	66	48	100	52	64	33	30	0	23	0	0	31	31	0	25	0	44	1	47	6	10	15	29	85	1	98	36	41	31	107	4	0	0	20	2	19	32	0	0	0	0	0	19	28	0	0	1	0	0	0	111	129	92	47	65	22	10	336	167	407	190	325	204	346	289	3	0	0	0	0	1	0	0	179	180	13	55	77	300	302	71	248	67	100	244	49	325	164	365	397	415	131	166	255	289	429	220	122	129	30	222	189	179	339	78	128	78	335	823	354	501	321	401	247	347	394	40	35	3	157	90	76	88	160	119	172	34	23	272	4	44	293	38	177	26	91	20	16	14	215	53	55	146	916	763	789	546	116	722	788	493	471	948	70	45	344	111	96	388	217	215	516	767	150	56	12	6
..........................................................................................................TATCACAGCC-AGCTTTGAGGAA.........................................................	22	2	16457.50	32915	0	0	0	0	25	4	9	11	17	20	5	8	4	17	0	0	0	12	0	0	20	32	59	117	0	2	60	0	0	0	0	0	0	0	4	38	49	92	32	63	18	124	89	23	44	54	16	27	64	61	96	33	45	46	441	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	72	67	54	48	36	55	17	41	55	44	15	67	3	2	1	64	2	4	29	18	53	1	1	22	34	243	5	64	156	210	512	167	225	5	8	35	7	38	38	0	125	19	0	18	0	28	7	56	0	72	10	77	76	0	0	0	0	3	0	0	1	0	0	39	152	191	80	118	82	67	138	35	80	133	33	52	103	30	0	0	0	0	0	182	35	78	74	110	91	273	286	0	220	0	0	34	131	3	115	3	109	0	131	3	0	28	92	239	2	131	159	223	164	113	0	0	1	121	3	151	43	0	0	0	0	0	128	263	0	0	3	0	0	0	88	89	38	202	335	142	110	137	371	122	193	161	495	150	508	26	0	0	38	0	0	0	0	52	48	17	34	64	147	57	36	55	36	153	78	39	39	256	45	100	118	19	87	87	86	193	38	135	90	169	476	118	106	552	202	112	76	373	905	289	803	348	1027	141	418	184	285	166	41	390	174	125	207	311	157	43	56	26	89	56	235	312	183	264	153	142	60	96	46	511	374	261	495	840	117	265	177	36	164	195	286	84	332	135	67	527	91	66	200	100	89	161	291	654	347	853	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGG......................................................	25	2	14352.50	28705	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	2	8	2	2	0	9	0	74	9	1	4	22	3	86	15	5	3	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	6	9	7	3	0	0	0	0	0	2	0	1	0	0	4	0	1	1	0	0	0	0	0	0	1	0	1	2	6	1	2	3	0	0	2	0	0	0	0	3	2	0	2	0	0	0	3	0	2	0	5	2	0	0	0	0	0	0	1	0	0	0	10	11	5	14	3	5	4	10	7	6	7	28	14	9	1	0	0	0	0	1	6	2	0	16	2	3	9	4	0	7	0	0	4	1	0	6	0	13	0	11	0	0	3	1	730	1	19	7	1	4	7	0	0	0	1	0	4	12	0	0	0	0	0	3	3	0	0	0	0	0	0	19	30	18	13	6	9	8	7	2	5	10	5	3	1	3	6	0	1	8	0	0	0	0	5	9	0	5	27	72	101	11	48	15	58	124	8	163	24	54	65	76	73	25	16	60	49	41	14	8	3	8	21	18	27	4	13	9	155	223	166	142	192	342	88	112	200	304	569	32	251	298	218	270	82	36	26	13	11	75	33	43	27	99	56	59	159	80	52	5	346	26	9	37	622	1823	1371	1562	29	397	1321	879	1606	2322	3	53	978	57	15	43	93	48	266	549	72	5179	1822	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGTA.....................................................	26	1	14053.00	14053	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	4	0	0	0	0	0	0	0	0	0	0	0	0	14	3	7	5	3	3	5	3	6	2	5	4	2	2	2	8	8	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	4	2	5	2	0	0	0	1	0	1	0	0	0	1	1	0	1	2	0	1	2	0	0	1	0	0	8	2	5	1	0	0	0	1	0	0	0	4	0	3	3	0	5	0	1	4	21	1	4	2	4	7	0	0	0	0	0	0	0	0	0	0	16	53	36	24	10	18	11	24	24	11	50	11	15	13	6	0	0	0	0	0	1	0	0	6	0	21	12	16	0	4	0	0	10	10	0	8	0	21	0	31	5	0	3	0	27	0	24	11	4	25	23	1	0	1	5	0	22	54	0	0	0	0	0	5	13	0	0	0	0	0	0	27	46	25	5	76	11	11	5	11	13	9	17	5	7	12	15	0	0	13	0	6	0	0	14	9	0	10	34	19	38	4	62	16	76	86	11	34	11	21	21	22	62	30	24	87	47	22	10	14	5	11	28	43	28	13	20	20	27	95	39	136	42	137	29	100	62	73	168	6	32	210	86	129	186	99	35	34	17	114	29	33	76	67	159	64	88	96	45	13	258	83	58	219	228	634	392	473	57	245	638	459	974	408	28	210	1698	150	109	109	197	149	466	107	74	697	260	0
............................................................................................................TCACAGCC-AGCTTTGAGGAGC........................................................	21	2	12570.50	25141	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	4	7	6	0	0	10	0	1	0	0	0	0	0	0	3	4	1	1	2	0	2	3	2	3	2	0	4	6	2	5	8	4	0	3	0	3	4	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11	17	6	9	1	4	3	23	16	8	14	18	1	2	3	4	1	2	6	1	10	3	2	9	11	24	0	41	37	50	84	28	24	1	5	6	7	15	1	1	5	7	0	11	0	5	1	56	0	5	0	5	6	0	0	0	0	0	0	0	0	0	0	3	3	5	10	2	5	2	5	1	0	10	3	0	5	2	0	0	0	0	0	3	14	2	14	4	61	8	8	0	7	0	0	1	11	0	12	1	9	0	15	1	0	2	16	33	0	23	3	1	2	13	0	0	0	1	0	12	12	0	0	0	0	0	6	20	0	0	0	0	0	0	27	7	8	4	16	1	0	22	8	17	7	17	14	24	26	1	0	0	14	0	0	0	0	38	59	3	19	36	210	368	53	314	54	82	252	30	226	76	190	277	349	44	68	125	255	313	79	55	86	8	132	72	75	271	28	89	22	103	268	219	632	177	352	130	373	226	89	108	7	93	49	51	47	56	10	59	9	2	78	5	112	218	45	128	24	91	24	26	21	705	126	98	364	1508	449	828	518	36	379	552	675	491	1303	80	28	351	52	47	187	118	103	1077	961	1064	2355	1170	33
...........................................................................................................ATCACAGCC-AGCTTTGAGGAGCGT......................................................	24	1	11992.00	11992	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	4	0	0	0	50	0	0	0	0	0	0	0	0	7	4	3	0	2	2	3	5	2	1	1	5	2	2	5	1	6	0	0	7	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	16	19	12	11	0	0	0	0	3	0	1	1	0	0	0	1	0	0	0	0	0	0	0	2	0	0	0	1	5	22	8	3	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	8	11	17	2	10	11	9	17	5	17	8	13	4	5	0	0	0	0	0	9	18	13	77	30	34	0	0	0	0	0	0	0	2	0	1	0	2	0	0	0	0	10	0	276	0	0	3	1	4	7	0	0	0	0	0	2	14	0	0	0	0	0	8	7	0	0	0	0	0	0	94	81	61	23	22	3	5	1	3	2	6	6	2	2	2	8	0	0	7	0	0	0	0	3	4	0	1	8	33	19	5	19	2	8	29	2	42	9	37	55	12	5	12	12	6	14	8	2	7	3	12	12	14	6	2	33	16	25	203	39	247	14	179	24	165	172	33	29	3	21	9	15	8	29	40	54	9	5	115	2	21	78	13	58	8	138	9	12	4	538	76	47	86	166	539	1013	343	141	103	436	199	310	697	33	55	233	56	48	78	152	87	2248	360	208	110	184	0
................................................................................................................AGCC-AGCTTTGAGGAGCG.......................................................	18	2	11056.50	22113	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	42	31	1	0	0	6	97	0	0	0	0	0	0	0	0	24	7	18	5	18	6	12	4	27	0	22	14	26	23	20	6	45	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	4	1	0	9	1	27	50	2	6	6	1	0	10	1	0	5	8	3	4	2	1	3	7	12	0	20	30	57	50	6	13	0	0	10	1	2	3	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	95	72	98	94	13	86	185	156	156	102	148	71	34	88	22	0	0	0	0	0	49	6	35	697	26	71	3	5	0	2	0	0	2	4	1	13	0	8	0	15	1	0	44	6	2741	82	9	99	39	165	184	17	2	0	11	5	274	2744	0	0	0	0	0	3	19	57	2	172	48	5	0	1332	1253	1127	486	201	125	340	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	87	83	3	1	6	18	12	2	15	5	5	20	1	19	3	23	12	16	13	6	12	21	21	12	4	12	9	32	45	47	65	26	9	17	91	432	47	303	40	250	41	188	37	95	13	4	14	26	28	20	62	217	97	9	8	143	5	30	147	67	195	26	62	27	60	24	467	85	243	325	31	291	396	117	30	113	187	235	182	316	17	45	163	43	45	48	70	58	111	63	38	103	15	17
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGTTT....................................................	27	1	10480.00	10480	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	7	3	3	5	3	1	3	4	4	8	2	5	5	4	5	8	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	5	5	5	0	2	0	0	0	0	3	0	0	0	0	1	0	0	0	0	0	0	0	2	5	0	0	6	3	7	0	0	1	0	0	1	0	1	0	0	2	1	0	0	0	2	2	8	0	5	0	4	1	0	0	0	0	0	0	0	1	0	0	0	5	9	11	0	10	11	12	17	2	119	3	4	19	5	0	0	0	0	0	0	0	0	0	0	0	2	3	0	6	0	0	10	8	1	8	0	12	0	13	11	0	0	0	0	0	13	3	1	13	7	4	0	0	1	2	35	42	0	0	0	0	0	1	2	0	0	0	0	0	0	3	0	3	6	102	4	6	3	4	2	5	1	11	1	11	34	0	1	15	0	0	0	0	5	0	0	7	24	31	32	0	75	11	44	59	9	54	6	6	5	9	22	55	19	85	27	22	9	10	1	22	25	17	24	5	11	8	19	62	45	110	32	103	6	44	60	46	108	15	39	106	56	68	71	12	18	25	10	181	18	17	22	25	76	54	40	57	20	7	297	39	6	89	158	408	297	308	83	93	409	349	866	191	41	173	796	102	66	56	128	134	931	145	128	758	323	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAT.........................................................	22	2	9701.00	19402	0	0	0	0	0	0	1	0	0	1	1	0	0	0	2	0	0	5	0	0	3	14	19	29	0	1	133	0	0	0	0	0	0	0	0	59	57	46	54	140	22	35	34	18	21	42	34	8	12	12	26	19	84	98	1193	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	15	16	15	9	2	8	20	5	5	2	8	10	6	0	3	5	1	2	2	0	13	1	0	2	2	18	2	17	39	28	44	20	34	1	0	1	0	5	6	1	44	5	1	3	0	5	2	13	0	77	1	56	68	0	0	0	0	1	0	0	0	4	0	63	48	40	38	35	34	21	41	24	38	80	13	16	18	25	0	0	0	0	0	58	127	100	36	43	71	49	72	0	44	0	0	27	26	0	25	0	77	0	64	0	0	12	44	263	2	79	40	26	87	19	0	0	1	23	0	32	6	0	0	0	0	0	29	55	0	0	0	0	0	0	33	26	34	34	84	24	52	79	165	63	87	96	240	53	152	119	0	1	254	10	3	0	0	23	18	2	156	43	173	124	44	115	95	265	124	46	45	46	41	425	761	46	355	24	575	64	20	42	39	30	172	38	54	146	98	163	30	211	564	149	413	120	578	60	334	62	225	154	37	402	260	128	125	354	112	46	58	33	54	25	80	95	55	48	86	43	60	49	28	320	43	17	35	303	25	77	36	6	64	39	47	27	157	41	86	363	125	45	156	36	37	102	136	232	340	459	0
..............................................................................................................ACAGCC-AGCTTTGAGGAGCGT......................................................	21	1	8953.00	8953	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	3	12	0	0	1	53	0	0	0	0	0	0	0	1	42	27	24	12	30	8	10	27	21	6	28	43	11	11	10	20	27	7	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	33	54	44	21	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	39	44	39	87	17	42	39	46	79	34	82	88	77	25	26	0	0	0	0	0	18	11	3	65	4	15	1	1	0	0	0	0	1	5	1	3	0	0	0	2	0	0	1	2	107	1	9	17	3	18	26	0	0	1	2	1	6	37	0	0	0	0	0	2	17	0	0	2	0	0	0	33	56	23	30	38	14	13	21	16	26	8	18	11	17	16	1	0	0	1	0	0	0	0	26	12	0	6	42	45	81	10	99	29	49	110	12	209	23	61	116	68	79	52	25	113	70	73	25	20	9	26	45	39	49	17	25	35	19	131	47	63	27	75	35	44	50	19	29	0	33	70	46	48	52	27	44	5	0	101	5	6	23	7	36	8	16	7	9	3	59	16	20	23	100	424	206	360	29	187	354	199	429	344	66	41	374	40	24	60	74	45	361	128	30	41	47	0
...........................................................................................................ATCACAGCC-AGCTTTGAGGAGC........................................................	22	2	7046.50	14093	0	0	0	0	0	0	0	0	2	0	1	0	0	1	0	0	0	2	0	0	6	0	12	1	0	1	138	0	2	0	0	0	0	0	0	14	10	14	4	11	9	12	8	12	4	7	14	13	13	8	16	21	5	36	80	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	32	24	23	44	0	2	0	9	2	2	10	9	0	0	1	0	0	0	5	2	3	0	0	0	3	2	0	35	51	55	81	8	15	0	0	3	0	3	0	0	1	2	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	8	16	9	14	7	7	10	9	7	13	14	21	9	14	8	0	0	0	0	0	39	32	28	40	81	59	11	12	0	3	0	0	4	11	0	9	2	4	0	2	1	0	16	65	167	3	3	9	6	6	12	0	1	5	4	2	5	4	0	0	0	0	0	13	11	0	0	0	0	0	0	146	109	92	9	16	4	1	23	14	21	29	23	16	13	16	42	0	0	46	0	0	0	0	14	13	4	4	5	100	28	14	21	9	15	67	4	50	38	105	67	15	8	9	71	9	38	22	17	13	10	42	21	20	17	9	73	32	88	696	81	548	60	536	69	362	595	35	21	11	24	14	13	11	17	30	35	10	7	79	3	43	160	19	95	10	59	6	14	49	1313	156	84	166	280	195	458	96	85	74	207	106	93	405	18	35	136	62	42	88	102	74	803	723	411	152	576	4
..........................................................................................................TATCACAGCC-AGCTTTGAGGT..........................................................	21	2	6521.50	13043	0	0	0	0	0	0	0	1	0	0	0	0	0	1	2	0	0	6	0	0	1	3	8	18	0	0	48	0	0	0	0	0	0	0	0	3	4	1	4	3	1	11	13	2	5	4	1	0	9	9	7	3	6	90	74	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	3	4	6	8	1	2	0	2	0	3	10	4	0	0	10	0	0	8	2	4	0	0	2	4	18	3	7	12	9	41	15	20	1	0	0	0	3	4	9	34	24	1	4	0	8	11	19	0	28	0	34	27	0	0	2	1	0	0	0	0	0	0	4	4	3	5	0	3	1	3	3	6	53	3	8	0	3	0	0	1	0	0	47	27	33	21	22	22	70	82	0	30	0	0	13	22	0	13	0	25	0	38	0	0	13	20	222	2	43	47	3	52	3	0	0	0	23	0	41	4	0	0	0	0	0	0	2	0	0	0	0	0	0	37	29	35	4	41	6	32	10	9	6	13	1	12	3	16	5	0	0	12	1	0	0	0	1	2	7	16	87	215	52	46	35	81	378	141	54	65	29	21	42	35	25	66	23	60	20	7	37	29	38	232	29	42	105	68	14	14	15	40	26	68	18	68	9	45	69	214	116	18	215	232	99	183	251	2	7	23	7	79	35	14	30	4	26	80	38	88	43	31	372	17	9	51	562	60	175	207	20	117	91	153	44	135	19	159	1441	141	51	55	85	68	161	477	921	293	787	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAC.........................................................	22	2	5939.50	11879	0	0	0	0	0	1	1	0	1	1	2	0	0	1	2	0	0	3	0	0	0	0	1	3	0	1	24	0	0	0	0	0	0	0	0	10	6	8	15	35	7	51	13	1	1	4	2	0	7	6	23	1	15	25	396	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	10	8	6	3	3	1	0	0	1	2	3	0	0	3	0	7	0	0	0	0	2	0	0	1	0	5	0	9	24	8	9	3	9	0	3	1	2	0	2	0	24	13	0	0	0	4	2	8	2	12	0	9	4	0	0	0	0	1	0	0	0	2	0	20	8	7	29	29	12	12	18	6	4	19	35	13	25	29	0	0	0	0	0	40	22	30	18	50	35	40	18	0	20	0	0	8	8	0	11	1	8	0	4	0	0	16	28	73	0	63	2	13	26	19	0	0	1	1	1	13	3	0	0	0	0	0	7	11	0	0	0	0	0	0	17	16	6	2	17	13	27	73	53	48	37	69	74	61	97	12	0	0	28	23	5	0	0	3	3	3	17	13	71	36	33	48	16	44	42	20	11	14	14	262	246	6	56	15	114	19	17	23	16	39	79	14	23	41	39	41	8	224	707	180	474	124	451	107	223	56	323	230	89	397	97	54	64	222	34	8	10	7	79	17	305	38	246	41	71	149	24	19	124	122	30	7	20	457	70	91	58	14	53	65	134	78	164	10	27	85	26	24	55	35	19	43	106	406	302	325	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAAA........................................................	23	2	5337.00	10674	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	5	25	25	0	0	0	12	0	0	0	0	0	0	0	5	12	9	30	11	21	4	62	29	7	11	21	7	13	13	13	13	8	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	4	2	4	4	27	1	11	7	16	1	1	0	0	0	2	0	0	2	3	4	0	0	1	0	8	0	6	1	10	12	5	4	3	0	4	0	0	7	0	5	1	0	1	0	3	0	3	0	3	1	7	15	0	0	0	0	0	2	0	0	0	0	4	107	85	56	42	48	15	146	11	43	11	13	6	29	12	0	0	0	0	0	20	0	0	4	2	0	25	22	0	18	0	0	2	7	0	10	0	12	0	13	0	0	0	4	30	0	6	30	106	26	76	0	0	0	13	5	27	16	0	0	0	0	0	89	330	0	0	3	0	0	0	5	1	2	18	24	22	6	57	129	74	55	84	478	59	219	6	0	0	1	0	0	0	0	13	17	0	3	1	10	1	1	3	6	10	5	9	4	42	4	3	12	2	8	4	3	13	1	2	8	16	32	4	5	29	9	6	5	279	888	240	706	335	1075	44	152	8	15	7	6	7	14	11	22	25	84	10	4	1	4	53	54	104	97	212	17	33	10	17	6	26	369	298	726	39	9	36	8	7	22	24	34	8	44	98	24	94	15	75	187	34	78	32	32	92	15	94	0
...........................................................................................................ATCACAGCC-AGCTTTGAGGAG.........................................................	21	2	5060.50	10121	0	0	0	0	1	0	0	1	0	1	0	0	0	1	0	0	0	3	0	0	5	0	6	2	0	0	130	0	1	0	0	0	0	0	2	6	3	5	4	13	5	3	3	2	6	8	2	1	12	6	7	17	6	48	87	26	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	29	36	23	27	1	6	0	8	4	1	6	12	1	0	3	4	1	0	4	2	10	0	1	2	6	29	1	22	26	49	67	29	44	3	0	0	1	6	1	0	0	2	0	2	0	1	4	5	0	2	0	0	1	0	0	1	0	2	2	0	1	0	0	12	14	7	4	3	8	4	5	3	3	13	3	2	5	2	0	0	0	0	0	26	20	8	19	25	15	25	12	0	13	0	0	9	35	1	32	1	3	1	9	0	0	9	7	231	12	28	8	4	7	1	0	0	1	5	0	12	2	0	0	0	0	0	0	4	0	0	0	0	0	3	19	23	35	18	24	7	5	16	8	18	11	15	23	8	14	36	0	0	89	0	0	0	0	1	2	6	10	37	34	29	4	11	13	38	45	14	21	15	27	27	14	20	10	25	10	20	7	12	16	7	40	7	15	26	14	27	22	195	1503	82	481	81	690	43	402	175	22	11	6	15	59	63	53	119	21	12	5	3	7	2	17	84	8	38	18	15	5	12	47	606	53	20	51	284	43	180	30	13	23	56	44	21	141	2	18	204	26	14	31	22	35	157	290	338	101	441	0
..........................................................................................................TATCACAGCC-AGCTTTGAG............................................................	19	2	4602.50	9205	0	0	0	0	0	0	0	0	0	0	0	0	0	0	15	0	0	20	0	0	2	4	5	10	0	0	16	0	5	9	126	143	1	3	30	10	7	10	2	7	2	9	11	4	7	3	0	0	9	12	7	3	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	110	133	88	63	8	3	0	5	1	5	19	89	3	1	7	10	0	6	23	7	28	0	0	5	10	86	2	30	39	115	190	39	121	2	1	4	0	13	12	2	41	35	1	10	0	8	12	23	0	28	3	67	43	1	0	30	39	0	0	0	0	28	2	20	14	7	0	1	8	18	10	14	11	125	3	5	6	2	0	2	1	0	0	38	45	78	10	72	29	89	139	0	54	1	0	34	159	9	136	6	54	0	55	33	0	18	56	164	0	124	8	5	16	7	0	0	0	3	0	12	2	0	0	0	0	0	3	0	0	0	0	0	0	0	28	17	38	37	63	25	67	41	167	30	32	29	80	19	96	18	3	2	36	0	0	0	0	5	5	14	6	32	126	19	31	14	38	351	137	30	40	30	42	27	31	16	57	23	37	28	10	57	37	28	242	20	87	151	70	36	17	7	24	4	17	10	31	3	25	12	41	33	2	155	32	19	30	87	2	3	6	2	9	14	3	8	3	3	17	10	6	6	239	669	9	8	12	63	4	23	28	1	23	9	13	2	42	2	33	311	25	9	7	10	15	35	75	186	53	100	1
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGTAA....................................................	27	1	4342.00	4342	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	10	9	11	2	6	0	4	3	9	0	6	6	2	5	3	1	8	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	2	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	6	2	0	1	0	0	0	0	0	1	0	0	1	1	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	5	24	22	42	19	16	5	23	14	8	11	12	9	6	6	0	0	0	0	0	0	0	0	0	0	0	1	2	0	1	0	0	0	3	0	3	0	2	0	1	0	0	0	0	0	0	2	0	2	5	13	0	0	0	0	1	5	63	0	0	0	0	0	6	16	0	0	0	0	5	0	1	1	0	9	24	3	1	4	2	1	2	4	1	2	2	2	0	0	1	0	0	0	0	1	1	0	1	5	4	7	1	9	6	12	18	3	2	3	0	2	3	11	7	4	3	9	0	3	3	2	2	0	4	5	2	6	6	45	98	31	151	37	138	22	59	4	14	26	2	3	33	10	18	25	38	4	5	1	11	7	30	41	60	134	16	12	31	17	1	34	69	12	128	55	168	62	84	21	23	119	169	156	127	8	88	483	48	41	75	132	118	66	21	14	167	60	0
............................................................................................................TCACAGCC-AGCTTTGAGGAGCT.......................................................	22	4	4073.00	16292	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	25	0	0	0	0	0	0	0	0	3	4	3	2	2	4	0	5	11	2	7	5	13	7	1	2	6	68	86	119	7	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	3	0	1	8	11	14	3	14	0	0	1	1	4	1	0	3	0	0	1	0	0	0	5	0	1	0	2	2	0	0	0	0	0	0	0	0	0	0	33	37	23	30	13	7	18	7	14	10	21	44	16	18	7	0	0	0	0	0	16	7	46	29	9	11	35	17	0	18	0	0	0	16	0	8	0	90	0	124	1	0	6	13	1516	12	27	5	1	7	13	0	0	0	0	1	5	21	0	0	0	0	0	8	17	0	0	1	0	0	0	11	9	1	5	6	2	0	1	1	0	0	0	0	0	1	4	0	0	10	0	0	0	0	16	16	2	10	6	91	40	18	51	7	19	111	15	99	27	38	57	94	21	49	22	71	26	11	22	8	4	37	42	27	82	13	39	27	371	150	636	323	396	123	147	88	476	456	569	60	842	90	98	114	3	13	15	6	4	37	13	113	65	167	63	35	205	58	49	9	112	15	9	20	1950	47	216	90	7	21	63	162	46	177	3	11	40	3	8	27	27	16	123	65	1783	1149	196	0
................................................................................................................AGCC-AGCTTTGAGGAGCGT......................................................	19	1	3714.00	3714	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	7	1	0	0	0	68	0	0	0	0	0	0	0	0	3	2	1	1	3	0	1	2	1	0	6	1	3	1	2	3	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	2	3	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	5	5	0	2	0	1	0	0	0	0	0	1	1	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	15	19	15	16	6	15	20	27	16	22	27	13	8	9	12	0	0	0	0	0	2	9	9	134	0	0	0	1	0	0	0	0	0	0	1	1	0	3	0	3	0	0	0	0	459	2	2	18	3	25	17	1	0	0	2	3	34	603	0	0	0	0	0	0	2	1	0	13	2	0	0	248	209	187	40	35	10	17	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	10	6	0	0	0	3	7	1	5	1	4	5	0	5	0	0	1	2	2	1	0	5	2	4	0	1	1	5	15	3	6	3	2	10	11	116	9	69	10	68	0	30	9	19	7	0	3	13	5	4	15	6	13	0	0	11	1	3	14	9	27	0	11	6	9	0	76	18	25	34	2	51	42	21	5	17	35	30	38	46	2	12	42	12	8	6	20	9	50	4	2	16	1	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGTAT....................................................	27	1	3376.00	3376	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	5	0	2	1	1	3	3	4	1	3	3	3	7	3	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	3	3	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	2	0	3	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	1	0	1	1	0	0	0	0	0	1	0	0	0	0	2	6	8	1	0	4	2	13	3	1	11	4	2	4	5	0	0	0	0	0	0	0	0	0	0	0	0	3	0	1	0	0	0	3	0	6	0	2	0	1	0	0	0	0	0	0	1	1	1	4	4	0	0	0	0	0	2	10	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	5	25	2	0	8	1	2	4	2	1	2	1	7	1	0	3	0	3	0	0	3	3	0	1	11	2	14	1	11	6	28	20	9	3	4	3	7	2	6	5	1	23	3	6	3	0	0	1	13	4	4	1	2	4	15	20	20	63	17	40	16	44	9	9	41	2	15	38	22	31	37	12	6	8	2	19	9	11	19	9	40	20	16	25	5	0	57	16	2	38	69	100	96	84	11	25	154	68	194	68	10	85	457	43	21	17	49	63	163	25	12	273	86	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGG........................................................	23	2	3312.00	6624	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	2	0	3	0	0	0	9	0	0	0	0	0	0	0	0	2	14	4	56	8	2	6	483	1	3	1	10	0	555	116	76	2	7	1	22	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11	9	9	3	0	0	0	1	1	1	2	3	0	0	1	4	0	0	2	1	1	0	1	2	2	12	2	3	18	12	13	4	13	1	1	4	0	1	3	0	3	26	0	31	0	2	3	20	1	9	0	2	6	0	0	0	0	0	1	0	0	0	0	5	6	2	16	5	0	6	6	5	0	4	2	3	6	3	0	0	0	0	0	5	8	5	13	2	8	15	19	0	18	0	0	10	9	0	8	0	31	0	17	4	1	6	13	51	1	22	0	3	4	0	0	0	0	2	0	2	0	0	0	0	0	0	1	3	0	0	0	0	0	0	13	8	4	13	3	9	5	4	1	5	6	4	3	3	5	6	0	0	14	0	0	0	0	42	18	2	20	7	50	37	9	29	22	41	43	18	84	47	111	22	38	44	7	15	12	100	9	8	9	2	22	31	30	44	12	15	18	69	50	89	65	74	82	52	34	74	40	48	16	45	40	22	40	13	4	5	9	7	12	15	19	23	28	32	15	72	27	37	10	9	5	4	11	45	25	42	51	7	31	52	594	77	41	1	6	58	6	7	9	12	16	17	131	806	201	88	0
..........................................................................................................TATCACAGCC-AGCTTTGA.............................................................	18	5	3042.60	15213	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	12	0	0	26	45	1	1	0	0	3	5	62	8	32	34	7	12	0	10	6	27	7	17	2	3	1	23	10	26	3	21	12	5	0	25	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	38	43	42	26	4	3	2	4	2	2	7	23	2	0	7	3	0	1	13	4	11	2	1	2	4	13	0	14	20	41	44	20	22	0	4	1	0	5	7	0	32	40	0	5	0	1	10	7	3	28	115	46	32	0	10	1580	2090	0	0	0	0	3	49	85	44	67	6	9	39	75	57	30	36	87	8	0	5	10	2	0	2	0	0	7	15	7	49	0	6	22	82	0	24	13	5	40	34	8	34	64	161	31	113	1226	0	16	23	1009	8	205	65	91	74	36	0	0	0	34	0	127	334	1	0	0	0	0	4	18	6	0	4	0	0	0	86	65	79	68	215	53	45	7	3	52	26	8	4	2	3	114	9	6	55	1	1	0	0	33	38	4	36	111	52	17	9	10	16	59	56	11	122	60	40	55	47	22	121	29	74	23	20	118	114	50	257	77	116	204	116	109	57	33	82	19	39	27	60	15	74	14	328	62	9	164	122	120	135	228	16	12	8	1	40	11	12	12	9	12	23	4	4	2	47	266	34	13	22	18	1	10	5	1	7	12	4	3	6	0	2	15	7	1	2	0	7	8	135	161	31	12	0
..................................................................GTCTTCAAAGTGGCAGTGACATG.................................................................................................	23	1	2943.00	2943	0	0	0	0	2	1	0	2	6	2	0	3	0	0	0	0	0	0	0	0	3	1	1	2	0	0	0	1	0	0	0	0	0	0	0	6	0	8	4	8	1	2	2	3	1	9	1	0	0	2	4	4	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11	8	7	0	26	2	112	27	11	2	36	0	1	7	1	0	3	4	2	2	2	1	3	7	33	0	7	12	16	60	13	25	0	0	2	0	0	3	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	5	9	1	0	2	0	2	8	4	7	1	2	2	1	0	0	0	0	0	0	0	0	2	0	1	3	0	0	3	8	2	1	4	9	3	0	0	0	1	0	0	0	0	0	0	3	11	6	9	5	2	3	0	3	0	5	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	46	74	13	8	7	6	33	29	28	6	11	24	3	2	0	6	0	0	0	0	0	3	0	0	1	0	2	3	0	0	1	2	1	1	0	2	9	2	0	0	4	0	12	14	10	5	10	5	5	3	4	2	1	1	7	61	15	113	19	104	10	79	1	0	0	3	8	2	3	5	20	54	19	0	2	18	0	0	75	0	28	0	0	0	0	101	18	49	26	28	199	14	50	10	26	18	31	7	6	80	3	6	21	9	8	35	6	27	286	51	36	52	28	0
.................................................................................................................GCC-AGCTTTGAGGAGCGT......................................................	18	1	2538.00	2538	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	6	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	3	0	3	0	1	1	2	1	7	1	1	3	0	0	4	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	3	0	0	0	0	0	1	0	1	0	1	0	1	0	0	0	0	2	1	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	15	12	17	0	12	11	14	20	28	18	35	12	3	1	3	0	0	0	0	0	0	0	0	85	1	0	0	1	0	0	0	0	0	2	0	3	0	1	0	6	0	0	0	0	281	0	1	11	2	20	11	2	0	0	3	0	27	475	0	0	0	0	0	0	3	1	0	1	0	0	0	154	101	129	30	15	18	28	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	8	0	0	2	2	0	1	0	0	0	1	0	1	0	1	1	1	0	4	0	2	1	2	1	1	1	4	16	3	3	0	3	4	7	43	10	47	5	26	5	26	3	15	4	0	1	4	6	4	12	7	5	1	0	14	0	4	7	9	19	7	8	4	7	3	56	26	21	34	0	47	24	32	2	11	30	46	31	19	1	8	33	3	3	5	16	7	26	3	2	6	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGAA.......................................................	24	2	2329.00	4658	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	1	3	0	0	0	7	0	0	0	0	0	0	0	2	1	1	3	1	1	1	6	7	1	0	2	1	1	3	4	9	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	6	2	1	1	1	0	0	0	4	0	0	0	0	0	2	0	0	8	0	3	0	0	4	5	9	0	2	7	13	0	1	0	0	0	0	0	0	0	0	2	1	0	1	0	1	2	5	0	4	1	4	2	0	0	0	0	0	0	0	0	0	0	2	13	10	1	15	7	3	12	2	8	6	1	3	3	0	0	0	0	0	0	12	0	9	6	18	14	19	16	0	18	0	0	13	12	1	10	0	6	0	14	0	0	0	28	119	2	14	12	10	13	11	0	0	0	2	0	8	7	0	0	0	0	0	10	25	0	0	2	0	0	0	16	7	4	4	8	10	6	21	15	22	13	12	71	10	36	4	0	0	12	1	0	0	0	0	1	0	2	4	6	4	1	4	4	17	7	3	2	17	2	4	7	9	7	2	2	7	1	2	4	3	3	2	1	8	0	2	2	56	148	55	116	44	154	12	40	14	13	6	2	6	47	24	26	41	14	1	9	2	9	7	11	14	27	37	36	31	35	24	2	20	38	47	128	73	51	41	21	5	29	42	159	18	92	1087	48	238	34	24	32	35	49	28	27	60	28	59	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGTG.....................................................	26	1	1995.00	1995	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	2	1	1	0	0	0	0	2	0	0	0	2	0	3	0	1	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	2	1	9	3	3	2	2	4	1	1	4	1	0	3	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	2	0	0	0	0	0	1	0	0	0	0	1	0	4	1	0	0	1	0	0	0	0	0	0	8	0	0	0	0	0	0	1	0	0	0	0	0	0	2	8	1	3	11	2	1	3	0	1	0	3	0	0	0	2	0	0	1	0	0	0	0	2	0	0	2	8	7	7	0	5	4	12	7	4	8	3	5	3	2	25	2	2	6	7	2	0	5	0	0	1	6	4	0	1	2	3	6	3	9	8	7	1	10	8	10	9	0	10	40	26	28	20	11	5	1	4	4	2	2	14	5	9	13	12	7	14	1	23	5	8	9	18	74	53	34	7	63	102	51	98	31	4	21	489	18	19	8	16	17	66	24	8	108	54	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCAC......................................................	25	2	1957.50	3915	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	0	0	1	0	0	0	0	0	0	0	2	14	3	20	1	4	2	17	12	3	0	3	2	2	13	4	5	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	1	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	1	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	2	0	56	136	71	36	25	27	11	47	8	13	1	13	8	7	8	0	0	0	0	0	4	8	5	3	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	2	0	16	1	0	1	8	0	19	0	0	0	0	1	1	8	0	0	0	0	0	12	42	0	0	0	0	0	0	11	5	5	4	11	1	0	3	0	1	3	6	5	2	6	1	0	0	1	11	4	0	0	4	5	0	0	2	2	5	0	2	1	4	7	2	3	2	0	1	4	2	1	0	5	9	4	1	6	2	0	1	5	12	3	3	2	45	148	47	186	44	144	7	41	4	4	8	1	4	12	7	4	12	84	9	4	3	18	13	33	47	65	97	5	3	6	3	1	36	87	57	180	83	81	75	26	36	15	67	180	42	121	24	20	115	32	116	156	54	125	16	27	15	51	54	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGTT.......................................................	24	4	1630.75	6523	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	3	0	0	0	1	7	2	0	0	18	0	0	0	0	0	0	0	0	1	2	1	2	1	1	4	6	0	0	2	2	1	8	5	9	4	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	2	0	1	0	0	0	0	1	0	0	0	2	0	0	2	1	0	1	0	0	0	0	1	1	4	10	7	11	2	0	0	0	0	0	0	0	0	3	0	0	2	0	0	7	5	1	3	0	1	3	0	0	0	0	0	0	0	0	0	0	1	8	5	1	0	3	1	3	5	2	14	4	3	1	1	0	0	0	0	0	14	114	16	21	0	7	11	7	0	2	0	0	4	3	0	4	0	4	0	9	0	0	8	0	164	0	8	43	3	43	10	0	0	0	9	0	55	7	0	0	0	0	0	3	5	0	0	0	0	0	0	30	43	15	2	20	3	10	2	10	2	8	0	7	4	7	6	0	0	5	0	0	0	0	5	5	32	4	10	27	6	4	8	3	20	22	5	12	2	9	3	8	6	8	3	13	8	2	3	4	5	23	5	13	21	5	3	7	74	187	65	160	67	178	48	108	36	41	51	15	44	97	31	37	50	7	4	15	4	31	6	16	30	20	22	30	50	71	49	11	205	409	15	40	60	116	165	111	33	44	112	137	111	117	9	101	688	152	64	38	76	57	127	92	168	182	166	0
.............................................................................................................CACAGCC-AGCTTTGAGGAGCG.......................................................	21	2	1607.50	3215	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	0	0	0	22	0	1	0	0	0	0	0	1	3	0	0	0	2	0	1	1	2	0	2	3	1	0	3	1	0	2	28	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	1	2	1	0	0	2	7	0	2	1	0	0	1	0	0	0	0	1	1	3	2	0	4	1	1	3	1	2	0	1	0	0	0	5	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	6	2	4	0	0	3	15	10	13	6	12	4	7	0	0	0	0	0	0	0	8	11	24	5	29	9	3	0	0	0	0	0	0	1	1	0	1	1	0	1	0	0	28	1	66	2	0	0	0	0	3	0	0	0	0	0	0	4	0	0	0	0	0	0	2	0	0	0	0	0	0	34	17	26	14	7	7	3	1	0	0	0	4	0	1	4	3	0	0	2	0	0	0	0	10	4	0	0	4	6	2	0	1	1	2	4	0	9	3	16	8	8	9	5	7	7	4	5	2	3	1	3	1	2	10	4	6	2	71	250	11	36	7	28	7	26	9	16	8	1	6	8	6	5	8	47	22	7	8	21	2	8	9	5	14	4	10	11	12	26	117	9	19	20	13	122	155	89	15	81	114	150	133	208	10	14	151	25	12	44	44	31	102	71	13	32	25	2

droSim2

CGTTTCGTGCAAAT---------------------------CAAAA--GAACTGAAAACTTCAACTGTCTTCAAAGTGGCGGTGACATGTTGTC-AACAATATTCATATCACAGCC-AGCTTTGAGGAGCGTTGCGGTTTTTC-------------------------------------------	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCG.......................................................	24	2	91498.50	182997	4183	589	3260	2558	4542	13584	706	804	80	59	27265	125044	153	154	0	14	2
..........................................................................................................TATCACAGCC-AGCTTTGAGGAG.........................................................	22	2	77634.50	155269	35746	7397	5547	12358	538	1498	10320	10719	2811	1939	28115	37093	326	850	1	5	6
..........................................................................................................TATCACAGCC-AGCTTTGAGGA..........................................................	21	2	73726.00	147452	486	105	47	1787	2378	7506	49432	62648	11602	7783	857	2566	37	218	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGC........................................................	23	2	29656.50	59313	1328	254	695	3638	482	1758	4093	4462	951	665	9971	30761	119	124	1	7	4
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGT......................................................	25	1	15554.00	15554	119	19	70	317	41	174	147	158	38	24	3665	10655	42	81	0	0	4
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGA........................................................	23	2	6684.00	13368	321	81	52	223	0	0	3608	4390	2871	1304	230	271	6	11	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAG............................................................	19	2	6076.00	12152	48	10	0	35	2586	9374	23	30	12	2	24	2	0	6	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGA.............................................................	18	5	5639.40	28197	46	6	3	8	7345	20060	79	133	59	16	427	13	0	2	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGG...........................................................	20	2	2322.00	4644	460	30	12	665	814	2070	154	189	60	21	26	12	15	115	0	0	1
..........................................................................................................TATCACAGCC-AGCTTTGAGGAA.........................................................	22	2	1843.00	3686	10	1	1	145	0	0	287	385	1116	1251	403	49	11	27	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAC.........................................................	22	2	1408.50	2817	2214	309	238	5	0	0	8	8	3	2	20	10	0	0	0	0	0
.................................................................................................................GCC-AGCTTTGAGGAGCG.......................................................	17	2	1400.00	2800	0	0	0	0	0	0	1	1	1	0	2797	0	0	0	0	0	0
..............................................................................................................ACAGCC-AGCTTTGAGGAGCG.......................................................	20	2	1335.50	2671	4	0	0	0	0	4	0	0	0	0	1734	929	0	0	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGT........................................................	23	2	826.00	1652	56	26	3	271	0	0	244	283	107	55	295	247	6	59	0	0	0
..............................................................................................................ACAGCC-AGCTTTGAGGAG.........................................................	18	2	749.50	1499	41	16	11	1	0	0	0	0	1	0	1183	245	0	1	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAAA........................................................	23	2	657.50	1315	0	0	1	85	0	0	97	131	508	380	90	20	1	2	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCA.......................................................	24	2	576.00	1152	12	3	5	49	0	0	30	44	18	17	212	744	6	12	0	0	0
.................................................................................................................GCC-AGCTTTGAGGAG.........................................................	15	2	511.50	1023	0	0	0	0	0	0	1	0	0	0	1022	0	0	0	0	0	0
............................................................................................................TCACAGCC-AGCTTTGAGGAGCG.......................................................	22	2	492.00	984	1	1	3	8	10	52	0	0	0	0	262	647	0	0	0	0	0
................................................................................................................AGCC-AGCTTTGAGGAGCG.......................................................	18	2	456.00	912	0	0	0	0	2	0	2	2	1	0	892	13	0	0	0	0	0
.................................................................................................................GCC-AGCTTTGAGGAGC........................................................	16	2	424.50	849	0	0	0	0	0	0	0	0	0	0	849	0	0	0	0	0	0
.............................................A--GAACTGAAAACTTCAACT........................................................................................................................	19	1	388.00	388	105	9	248	4	10	3	0	2	0	0	3	4	0	0	0	0	0
...........................................................................................................ATCACAGCC-AGCTTTGAGGAG.........................................................	21	2	383.00	766	23	1	2	686	6	10	1	1	2	0	24	8	1	0	0	0	1
..............................................................................................................ACAGCC-AGCTTTGAGGAGC........................................................	19	2	347.50	695	0	2	0	1	0	0	0	0	0	0	482	210	0	0	0	0	0
...............................................................................................................CAGCC-AGCTTTGAGGAGCG.......................................................	19	2	297.00	594	0	0	0	3	2	0	0	0	0	0	574	15	0	0	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCT.......................................................	24	4	285.00	1140	13	4	2	33	0	0	56	59	21	10	169	765	1	7	0	0	0
............................................AA--GAACTGAAAACTTCAACT........................................................................................................................	20	1	281.00	281	79	12	185	0	0	0	1	2	0	0	2	0	0	0	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGC......................................................	25	2	260.50	521	16	3	1	10	0	0	25	27	3	5	138	289	3	1	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGTT.....................................................	26	1	249.00	249	2	0	0	25	20	30	19	29	4	6	31	80	2	1	0	0	0
............................................................................................................TCACAGCC-AGCTTTGAGGAG.........................................................	20	2	239.00	478	17	1	0	32	2	12	0	2	0	0	251	161	0	0	0	0	0
.................................................................................................................GCC-AGCTTTGAGGAGCGT......................................................	18	1	232.00	232	0	0	0	0	0	0	0	0	0	0	232	0	0	0	0	0	0
..............................................................................................................ACAGCC-AGCTTTGAGGAGCGT......................................................	21	1	232.00	232	0	0	0	0	0	0	0	0	0	0	150	80	2	0	0	0	0
...........................................................................................................ATCACAGCC-AGCTTTGAGGAGCG.......................................................	23	2	228.00	456	1	0	3	154	44	118	0	1	0	0	39	95	0	0	0	0	1
............................................................................................................TCACAGCC-AGCTTTGAGGAGC........................................................	21	2	226.00	452	0	0	0	12	46	120	0	2	1	0	98	173	0	0	0	0	0
............................................................................................................TCACAGCC-AGCTTTGAGGAGCGT......................................................	23	1	214.00	214	1	0	0	4	0	1	2	1	0	0	49	154	1	1	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAT.........................................................	22	2	211.00	422	78	25	1	37	0	0	58	62	52	40	28	36	0	5	0	0	0
................................................................................................................AGCC-AGCTTTGAGGAG.........................................................	16	2	140.00	280	0	0	0	0	0	0	0	0	1	0	279	0	0	0	0	0	0
...........................................................................................................ATCACAGCC-AGCTTTGAGGAGC........................................................	22	2	132.50	265	0	0	1	206	2	20	1	2	0	0	13	19	1	0	0	0	0
..................................................................GTCTTCAAAGTGGCGGTGACATG.................................................................................................	23	1	125.00	125	0	0	0	16	36	59	1	1	0	0	4	0	3	5	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGTA.....................................................	26	1	122.00	122	0	0	0	1	0	0	23	33	15	4	13	25	0	8	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGAA.......................................................	24	2	111.50	223	3	0	1	7	0	0	24	39	77	37	14	10	2	9	0	0	0
...............................................................................................................CAGCC-AGCTTTGAGGAG.........................................................	17	2	111.50	223	0	0	0	0	0	0	1	1	0	0	221	0	0	0	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCC.......................................................	24	2	107.50	215	7	1	5	2	0	0	2	4	0	0	37	156	1	0	0	0	0
................................................................................................................AGCC-AGCTTTGAGGAGCGT......................................................	19	1	84.00	84	0	0	0	0	0	1	0	0	0	0	80	3	0	0	0	0	0
...........................................................................................................ATCACAGCC-AGCTTTGAGGA..........................................................	20	2	81.50	163	1	0	0	80	18	52	4	5	2	0	0	0	0	1	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGG........................................................	23	2	71.50	143	36	11	8	6	0	0	3	6	0	1	3	68	0	1	0	0	0
..................................................................................................................CC-AGCTTTGAGGAGCG.......................................................	16	2	70.50	141	0	0	0	0	0	0	1	3	0	2	135	0	0	0	0	0	0
...................................................................................................................C-AGCTTTGAGGAGCG.......................................................	15	3	69.00	207	0	0	0	0	0	0	0	0	0	0	207	0	0	0	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGG..........................................................	21	3	62.67	188	50	17	8	15	0	0	34	47	0	1	4	12	0	0	0	0	0
..................................................................GTCTTCAAAGTGGCGGTGACA...................................................................................................	21	1	61.00	61	0	0	0	1	9	33	0	0	0	0	13	0	0	5	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGTAA....................................................	27	1	61.00	61	0	0	0	1	0	0	4	5	6	10	18	15	1	1	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGTAAA...................................................	28	1	60.00	60	0	0	0	5	0	0	13	16	11	11	3	1	0	0	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGTTAA...................................................	28	1	56.00	56	0	0	0	0	0	0	24	13	8	11	0	0	0	0	0	0	0
...............................................................................................................CAGCC-AGCTTTGAGGAGCGT......................................................	20	1	54.00	54	0	0	0	0	0	0	0	0	0	0	53	1	0	0	0	0	0
............................................................................................................TCACAGCC-AGCTTTGAGGA..........................................................	19	2	54.00	108	0	0	0	5	16	30	8	22	1	1	13	12	0	0	0	0	0
...............................................................................................................CAGCC-AGCTTTGAGGA..........................................................	16	2	50.50	101	0	0	0	0	0	0	0	7	3	3	88	0	0	0	0	0	0
..............................................................................................................ACAGCC-AGCTTTGAGGAA.........................................................	18	2	49.50	99	0	0	0	1	0	0	0	0	3	16	78	1	0	0	0	0	0
..........................................................................................................TATCACAGCC-AGCTTT...............................................................	16	5	48.80	244	0	0	0	0	0	0	1	1	0	0	242	0	0	0	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAAAA.......................................................	24	2	46.50	93	0	0	0	7	0	0	4	7	34	27	12	1	1	0	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGG......................................................	25	2	45.00	90	14	2	17	1	0	0	0	2	0	0	22	32	0	0	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTG..............................................................	17	5	41.40	207	0	0	0	0	0	0	1	3	0	1	202	0	0	0	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGT..........................................................	21	2	39.50	79	24	2	0	7	0	0	13	13	0	0	9	6	0	5	0	0	0
...........................................................................................................ATCACAGCC-AGCTTTGAGGAGCGT......................................................	24	1	39.00	39	0	0	0	20	1	1	0	0	0	0	10	7	0	0	0	0	0
..................................................................................................................CC-AGCTTTGAGGAGCGT......................................................	17	1	35.00	35	0	0	0	0	0	0	1	0	0	0	34	0	0	0	0	0	0
...................................................................................................................C-AGCTTTGAGGAGCGT......................................................	16	1	35.00	35	0	0	0	0	0	0	0	0	0	0	35	0	0	0	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGTTAAA..................................................	29	1	35.00	35	0	0	0	0	0	0	15	13	7	0	0	0	0	0	0	0	0
..............................................................................................................ACAGCC-AGCTTTGAGGA..........................................................	17	2	34.00	68	0	0	0	0	0	0	5	4	0	1	58	0	0	0	0	0	0
................................................................................................................AGCC-AGCTTTGAGGA..........................................................	15	4	33.75	135	0	0	0	0	0	0	38	31	18	4	44	0	0	0	0	0	0
...............................................................................................................CAGCC-AGCTTTGAGGAGC........................................................	18	2	33.00	66	0	0	0	1	0	0	0	0	0	0	56	9	0	0	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGTTT....................................................	27	1	33.00	33	0	0	1	4	0	0	9	2	0	1	2	13	0	1	0	0	0
.............................................................................................................CACAGCC-AGCTTTGAGGAG.........................................................	19	2	33.00	66	1	1	0	8	0	0	0	0	0	0	54	2	0	0	0	0	0
...........................................................................................................ATCACAGCC-AGCTTTGAG............................................................	18	2	32.50	65	0	0	0	1	20	44	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................AGCC-AGCTTTGAGGAGC........................................................	17	2	30.50	61	0	0	0	0	0	0	0	0	0	0	61	0	0	0	0	0	0
...........................................................................................................ATCACAGCC-AGCTTTGAGG...........................................................	19	2	27.50	55	0	0	0	26	8	20	0	0	0	0	0	0	0	1	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGTA.......................................................	24	2	27.50	55	3	0	0	1	0	0	5	22	9	4	2	6	1	2	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGA...........................................................	20	2	27.00	54	0	0	0	0	0	0	11	17	11	14	1	0	0	0	0	0	0
.....................................................................................................................AGCTTTGAGGAGCGT......................................................	15	1	27.00	27	0	0	0	0	0	0	0	0	0	0	27	0	0	0	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGC..........................................................	21	2	26.00	52	0	0	0	3	0	0	17	15	4	4	0	9	0	0	0	0	0
.............................................................................................................CACAGCC-AGCTTTGAGGAGC........................................................	20	2	25.00	50	4	0	0	1	0	0	1	0	0	0	40	4	0	0	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGTTA....................................................	27	1	24.00	24	0	0	0	1	0	0	6	10	1	1	1	1	0	3	0	0	0
.............................................................................................................CACAGCC-AGCTTTGAGGAGCG.......................................................	21	2	23.00	46	0	0	0	1	0	6	1	0	0	0	32	6	0	0	0	0	0
..........................................................................................................TATCACAGCC-AGCTT................................................................	15	5	19.00	95	0	0	0	0	0	0	0	0	0	0	95	0	0	0	0	0	0
............................................................................................................TCACAGCC-AGCTTTGA.............................................................	16	5	16.80	84	0	0	0	0	0	0	10	20	11	1	42	0	0	0	0	0	0
..................................................................GTCTTCAAAGTGGCGGTGACAT..................................................................................................	22	1	16.00	16	0	0	0	0	8	7	0	0	0	0	0	0	1	0	0	0	0

droSec2

CATTTCGTGCAAAT---------------------------CAAAA--GAACTGAAAACTTCAACTGTCTTCAAAGTGGCGGTGACATGTTGTC-AACAATATTCATATCACAGCC-AGCTTTGAGGAGCGTTGTGGTTTTTCT------------------------------------------	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCG.......................................................	24	2	247815.50	495631	7028	47588	273310	167705
..........................................................................................................TATCACAGCC-AGCTTTGAGGAG.........................................................	22	2	245919.50	491839	37486	69692	81950	302711
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGT......................................................	25	1	120574.00	120574	1137	18886	52743	47808
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGC........................................................	23	2	109671.00	219342	14244	24187	117288	63623
..........................................................................................................TATCACAGCC-AGCTTTGAGGA..........................................................	21	2	12943.50	25887	5812	1981	2099	15995
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGT........................................................	23	2	4560.50	9121	854	2924	632	4711
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGA........................................................	23	2	3168.50	6337	688	2076	495	3078
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGTT.....................................................	26	1	2553.00	2553	97	695	460	1301
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGC......................................................	25	2	2282.50	4565	65	493	2214	1793
............................................................................................................TCACAGCC-AGCTTTGAGGAGCG.......................................................	22	2	1591.50	3183	25	59	2240	859
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCA.......................................................	24	2	1577.50	3155	95	744	1014	1302
............................................................................................................TCACAGCC-AGCTTTGAGGAGCGT......................................................	23	1	1491.00	1491	4	84	815	588
..........................................................................................................TATCACAGCC-AGCTTTGAGG...........................................................	20	2	1382.00	2764	2394	19	22	329
..............................................................................................................ACAGCC-AGCTTTGAGGAGCG.......................................................	20	2	1187.00	2374	4	31	1518	821
............................................................................................................TCACAGCC-AGCTTTGAGGAG.........................................................	20	2	1055.50	2111	63	53	632	1363
..............................................................................................................ACAGCC-AGCTTTGAGGAG.........................................................	18	2	959.00	1918	15	24	469	1410
...........................................................................................................ATCACAGCC-AGCTTTGAGGAG.........................................................	21	2	931.50	1863	1682	12	20	149
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCT.......................................................	24	5	763.00	3815	110	1171	1115	1419
..........................................................................................................TATCACAGCC-AGCTTTGAGGAA.........................................................	22	2	745.00	1490	350	231	160	749
..........................................................................................................TATCACAGCC-AGCTTTGAGGT..........................................................	21	2	704.00	1408	61	302	9	1036
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGTTT....................................................	27	1	704.00	704	24	265	76	339
............................................................................................................TCACAGCC-AGCTTTGAGGAGC........................................................	21	2	650.50	1301	32	31	958	280
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGTA.....................................................	26	1	585.00	585	7	158	125	295
..............................................................................................................ACAGCC-AGCTTTGAGGAGC........................................................	19	2	527.50	1055	7	10	723	315
..............................................................................................................ACAGCC-AGCTTTGAGGAGCGT......................................................	21	1	424.00	424	3	13	238	170
...........................................................................................................ATCACAGCC-AGCTTTGAGGAGC........................................................	22	2	366.00	732	646	16	42	28
...........................................................................................................ATCACAGCC-AGCTTTGAGGAGCG.......................................................	23	2	338.00	676	423	37	122	94
..........................................................................................................TATCACAGCC-AGCTTTGAGGAT.........................................................	22	2	312.00	624	149	80	26	369
..........................................................................................................TATCACAGCC-AGCTTTGAG............................................................	19	2	307.00	614	200	15	23	376
..................................................................GTCTTCAAAGTGGCGGTGACATG.................................................................................................	23	1	261.00	261	38	12	157	54
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCC.......................................................	24	2	239.00	478	18	107	210	143
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGG......................................................	25	2	197.50	395	9	61	101	224
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGTAT....................................................	27	1	151.00	151	4	50	24	73
..........................................................................................................TATCACAGCC-AGCTTTGAGGAC.........................................................	22	2	142.00	284	39	56	34	155
...........................................................................................................ATCACAGCC-AGCTTTGAGGA..........................................................	20	2	141.50	283	276	0	2	5
...........................................................................................................ATCACAGCC-AGCTTTGAGGAGCGT......................................................	24	1	132.00	132	78	9	21	24
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGTAA....................................................	27	1	126.00	126	4	46	22	54
..........................................................................................................TATCACAGCC-AGCTTTGAGGAAA........................................................	23	2	119.50	239	44	49	72	74
..........................................................................................................TATCACAGCC-AGCTTTGA.............................................................	18	6	115.33	692	19	0	108	565
................................................................................................................AGCC-AGCTTTGAGGAGCG.......................................................	18	2	78.50	157	2	5	84	66
..................................................................GTCTTCAAAGTGGCGGTGACA...................................................................................................	21	1	73.00	73	15	3	7	48
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGAA.......................................................	24	2	59.50	119	13	58	10	38
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGTT.......................................................	24	5	56.60	283	20	110	5	148
..........................................................................................................TATCACAGCC-AGCTTTGAGCT..........................................................	21	2	56.00	112	2	2	96	12
...........................................................................................................ATCACAGCC-AGCTTTGAGG...........................................................	19	2	54.00	108	108	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGTTA....................................................	27	1	49.00	49	2	17	3	27
............................................................................................................TCACAGCC-AGCTTTGAGGA..........................................................	19	2	48.50	97	13	0	16	68
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGTA.......................................................	24	2	43.50	87	6	35	7	39
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGTC.....................................................	26	2	40.00	80	2	5	41	32
..........................................................................................................TATCACAGCC-AGCTTTGAGT...........................................................	20	2	35.50	71	10	8	4	49
..........................................................................................................TATCACAGCC-AGCTTTGAGAG..........................................................	21	3	34.00	102	37	7	16	42
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGG........................................................	23	2	33.50	67	23	7	11	26
.................................................................................................................GCC-AGCTTTGAGGAGCGT......................................................	18	1	32.00	32	0	1	8	23
..........................................................................................................TATCACAGCC-AGCTTTGAGCG..........................................................	21	3	31.67	95	12	6	37	40
..........................................................................................................TATCACAGCC-AGCTTTGAGGG..........................................................	21	3	31.67	95	52	4	5	34
..........................................................................................................TATCACAGCC-AGCTTTGAGGTT.........................................................	22	2	30.00	60	3	8	0	49

droYak3

GACTGCGTGCAAAT---------------------------GG---AAAAAGTGAAAACTTCAACTGTCTTCAAAGTGGCGGTGACATGTTGTC-AACAATATTCATATCACAGCC-AGCTTTGAGGAGCGTTGCGGTTTTTCTCGC----------C----------------------------	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCG.......................................................	24	2	120415.50	240831	1300	15981	22782	116027	13769	31599	38736	0	1	4	632
..........................................................................................................TATCACAGCC-AGCTTTGAGGAG.........................................................	22	2	100872.50	201745	11140	60536	10054	14886	23976	50526	30342	0	0	15	270
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGC........................................................	23	2	72719.00	145438	394	26577	52400	22875	7100	15494	20425	1	2	17	153
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGT......................................................	25	1	37074.00	37074	38	2553	4032	9492	2568	6115	11673	0	0	1	602
..........................................................................................................TATCACAGCC-AGCTTTGAGGA..........................................................	21	2	7907.50	15815	116	10267	575	1191	979	1957	723	1	0	6	0
..........................................................................................................TATCACAGCC-AGCTTTGAGG...........................................................	20	2	3138.00	6276	110	5785	251	1	36	60	22	2	0	6	3
...........................................................................................................ATCACAGCC-AGCTTTGAGGAG.........................................................	21	2	2117.00	4234	6	4161	34	3	4	19	7	0	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGT........................................................	23	2	1955.00	3910	18	1167	205	109	369	856	1167	0	0	0	19
............................................................................................................TCACAGCC-AGCTTTGAGGAGCGT......................................................	23	1	1187.00	1187	2	55	139	413	66	221	291	0	0	0	0
...........................................................................................................ATCACAGCC-AGCTTTGAGGAGC........................................................	22	2	1154.00	2308	0	1852	423	12	2	8	11	0	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGTT.....................................................	26	1	1035.00	1035	1	136	86	74	107	250	381	0	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGA........................................................	23	2	982.50	1965	64	549	191	143	217	465	334	0	0	1	1
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCT.......................................................	24	4	956.00	3824	6	337	602	631	289	778	1181	0	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCA.......................................................	24	2	887.00	1774	2	221	92	387	134	258	680	0	0	0	0
...........................................................................................................ATCACAGCC-AGCTTTGAGGAGCG.......................................................	23	2	750.50	1501	0	1213	149	63	5	12	40	0	0	0	19
..........................................................................................................TATCACAGCC-AGCTTTGAGGAC.........................................................	22	2	717.00	1434	729	37	568	5	5	68	22	0	0	0	0
..............................................................................................................ACAGCC-AGCTTTGAGGAGCG.......................................................	20	2	668.50	1337	0	23	23	914	113	226	38	0	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGC......................................................	25	2	667.00	1334	3	63	703	202	44	144	174	0	0	0	1
............................................................................................................TCACAGCC-AGCTTTGAGGAGCG.......................................................	22	2	612.00	1224	1	68	63	737	57	182	116	0	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAA.........................................................	22	2	568.00	1136	3	545	36	15	139	361	37	0	0	0	0
..................................................................GTCTTCAAAGTGGCGGTGACATG.................................................................................................	23	1	476.00	476	0	160	311	0	0	0	5	0	0	0	0
............................................................................................................TCACAGCC-AGCTTTGAGGAG.........................................................	20	2	375.50	751	8	191	29	97	102	288	36	0	0	0	0
..............................................................................................................ACAGCC-AGCTTTGAGGAG.........................................................	18	2	375.50	751	12	68	10	107	150	379	25	0	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCC.......................................................	24	2	342.50	685	2	18	354	109	12	54	136	0	0	0	0
...........................................................................................................ATCACAGCC-AGCTTTGAGGA..........................................................	20	2	314.50	629	0	625	3	1	0	0	0	0	0	0	0
............................................................................................................TCACAGCC-AGCTTTGAGGAGC........................................................	21	2	310.50	621	1	120	164	170	42	89	35	0	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGTTT....................................................	27	1	282.00	282	0	25	5	10	14	58	170	0	0	0	0
...........................................................................................................ATCACAGCC-AGCTTTGAGGAGCGT......................................................	24	1	279.00	279	0	225	27	13	0	4	10	0	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGT..........................................................	21	2	269.50	539	4	71	1	4	127	245	87	0	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAT.........................................................	22	2	243.50	487	21	201	17	12	68	153	15	0	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAG............................................................	19	2	211.50	423	9	327	11	0	28	32	9	0	0	1	6
..............................................................................................................ACAGCC-AGCTTTGAGGAGC........................................................	19	2	200.50	401	0	29	50	155	39	110	18	0	0	0	0
...........................................................................................................ATCACAGCC-AGCTTTGAGG...........................................................	19	2	191.00	382	0	379	2	0	0	1	0	0	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGTA.....................................................	26	1	138.00	138	0	19	5	11	20	34	49	0	0	0	0
..............................................................................................................ACAGCC-AGCTTTGAGGAGCGT......................................................	21	1	136.00	136	0	1	3	62	17	42	11	0	0	0	0
............................................................................................................TCACAGCC-AGCTTTGAGGAGCGTT.....................................................	24	1	91.00	91	0	14	15	14	4	25	19	0	0	0	0
.............................................................................................................CACAGCC-AGCTTTGAGGAGC........................................................	20	2	87.50	175	0	38	119	7	0	2	9	0	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAAA........................................................	23	2	80.50	161	0	100	14	7	7	26	7	0	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGG......................................................	25	2	79.00	158	5	13	56	25	10	21	27	0	0	0	1
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGG........................................................	23	2	75.50	151	11	31	39	55	6	7	2	0	0	0	0
..................................................................GTCTTCAAAGTGGCGGTGACA...................................................................................................	21	1	71.00	71	0	35	33	0	0	0	3	0	0	0	0
.........................................................................................................ATATCACAGCC-AGCTTTGAGGAGCG.......................................................	25	2	52.50	105	0	23	2	1	0	0	13	0	0	0	66
.............................................................................................................CACAGCC-AGCTTTGAGGAGCG.......................................................	21	2	50.00	100	0	26	34	9	3	3	25	0	0	0	0
............................................................................................................TCACAGCC-AGCTTTGAGGAGCT.......................................................	22	4	47.00	188	0	0	66	25	18	69	10	0	0	0	0
.............................................................................................................CACAGCC-AGCTTTGAGGAG.........................................................	19	2	46.00	92	1	76	4	1	0	3	7	0	0	0	0
.........................................................................................................ATATCACAGCC-AGCTTTGAGGAG.........................................................	23	2	45.00	90	0	89	0	0	0	0	0	0	0	0	1
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGTAT....................................................	27	1	40.00	40	0	7	0	2	3	5	23	0	0	0	0
...........................................................................................................ATCACAGCC-AGCTTTGAGGAGT........................................................	22	2	37.00	74	0	71	1	0	1	0	1	0	0	0	0
..................................................................GTCTTCAAAGTGGCGGTGACAT..................................................................................................	22	1	34.00	34	0	6	28	0	0	0	0	0	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGTT.......................................................	24	4	30.75	123	2	31	3	4	12	26	45	0	0	0	0
................................................................................................................AGCC-AGCTTTGAGGAGCG.......................................................	18	2	28.50	57	0	7	4	12	8	18	8	0	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGTAA....................................................	27	1	27.00	27	0	7	0	6	1	4	9	0	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGTTA....................................................	27	1	25.00	25	0	5	0	0	6	6	8	0	0	0	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGTG.....................................................	26	1	24.00	24	0	3	1	3	4	10	3	0	0	0	0

droEre2

GGATTCGTGCAATT---------------------------CG---CAATAGTGAAAACTTCAACTGTCTTCAAAGTGGCGGTGACATGTTGTC-AGCAATATTCATATCACAGCC-AGCTTTGAGGAGCGTTGCGGTTTTTCTCGC----------CC---------------------------	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
..........................................................................................................TATCACAGCC-AGCTTTGAGGAG.........................................................	22	2	404140.00	808280	115602	7696	30536	13230	93118	547137	961
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCG.......................................................	24	2	197636.00	395272	19825	10234	11692	45223	58251	244108	5939
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGC........................................................	23	2	104667.50	209335	39105	32786	10528	14285	30821	79400	2410
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGT......................................................	25	1	71545.00	71545	2292	1062	1360	3140	19932	42423	1336
..........................................................................................................TATCACAGCC-AGCTTTGAGGA..........................................................	21	2	27018.00	54036	16188	651	956	1323	2449	32464	5
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGT........................................................	23	2	6078.00	12156	1941	147	539	73	3086	6123	247
..........................................................................................................TATCACAGCC-AGCTTTGAGG...........................................................	20	2	4865.50	9731	8749	119	7	1	49	802	4
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGA........................................................	23	2	3493.00	6986	1304	158	308	57	1045	4087	27
...........................................................................................................ATCACAGCC-AGCTTTGAGGAG.........................................................	21	2	3236.00	6472	5879	32	22	8	61	464	6
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCA.......................................................	24	2	1903.00	3806	281	50	120	185	974	2143	53
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCT.......................................................	24	4	1822.25	7289	393	226	217	649	1658	4051	95
............................................................................................................TCACAGCC-AGCTTTGAGGAG.........................................................	20	2	1739.00	3478	305	15	110	77	78	2893	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGTT.....................................................	26	1	1708.00	1708	137	11	44	26	549	912	29
............................................................................................................TCACAGCC-AGCTTTGAGGAGCGT......................................................	23	1	1616.00	1616	46	19	35	150	279	1070	17
..........................................................................................................TATCACAGCC-AGCTTTGAGGAT.........................................................	22	2	1444.00	2888	363	10	82	122	73	2231	7
..........................................................................................................TATCACAGCC-AGCTTTGAGGAA.........................................................	22	2	1439.50	2879	1058	26	191	13	213	1378	0
...........................................................................................................ATCACAGCC-AGCTTTGAGGAGC........................................................	22	2	1217.50	2435	2047	227	9	7	37	84	24
............................................................................................................TCACAGCC-AGCTTTGAGGAGCG.......................................................	22	2	1011.00	2022	67	26	46	315	102	1453	13
...........................................................................................................ATCACAGCC-AGCTTTGAGGAGCG.......................................................	23	2	862.50	1725	1231	56	8	21	115	196	98
..............................................................................................................ACAGCC-AGCTTTGAGGAG.........................................................	18	2	691.00	1382	19	1	232	106	40	975	9
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGTTT....................................................	27	1	637.00	637	46	0	14	2	236	339	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGT..........................................................	21	2	632.00	1264	117	1	51	5	245	845	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGC......................................................	25	2	632.00	1264	58	184	29	86	202	636	69
..........................................................................................................TATCACAGCC-AGCTTTGAG............................................................	19	2	556.50	1113	446	3	15	0	41	595	13
............................................................................................................TCACAGCC-AGCTTTGAGGAGC........................................................	21	2	434.00	868	93	78	46	92	43	516	0
..............................................................................................................ACAGCC-AGCTTTGAGGAGCG.......................................................	20	2	408.50	817	5	4	108	332	46	322	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGTA.....................................................	26	1	387.00	387	18	0	10	3	111	195	50
..........................................................................................................TATCACAGCC-AGCTTTGAGGAC.........................................................	22	2	385.00	770	87	278	14	15	24	350	2
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCC.......................................................	24	2	373.50	747	52	99	16	194	46	333	7
...........................................................................................................ATCACAGCC-AGCTTTGAGGA..........................................................	20	2	371.00	742	711	3	0	0	1	27	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGG........................................................	23	2	348.50	697	83	14	6	25	1	568	0
...........................................................................................................ATCACAGCC-AGCTTTGAGGAGCGT......................................................	24	1	259.00	259	168	5	4	2	40	40	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAAA........................................................	23	2	244.00	488	312	11	13	7	32	113	0
..........................................................................................................TATCACAGCC-AGCTTTGA.............................................................	18	5	219.80	1099	30	3	3	7	6	1043	7
..................................................................GTCTTCAAAGTGGCGGTGACATG.................................................................................................	23	1	216.00	216	114	16	0	0	25	46	15
..............................................................................................................ACAGCC-AGCTTTGAGGAGC........................................................	19	2	209.00	418	6	11	73	94	22	212	0
...........................................................................................................ATCACAGCC-AGCTTTGAGG...........................................................	19	2	194.50	389	386	2	0	0	0	1	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGG......................................................	25	2	177.00	354	23	15	6	27	52	224	7
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGTAT....................................................	27	1	147.00	147	9	0	0	0	60	49	29
..............................................................................................................ACAGCC-AGCTTTGAGGAGCGT......................................................	21	1	113.00	113	1	1	10	21	12	68	0
.............................................................................................................CACAGCC-AGCTTTGAGGAG.........................................................	19	2	106.50	213	45	7	5	3	18	135	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGTAA....................................................	27	1	99.00	99	6	0	0	0	34	59	0
............................................................................................................TCACAGCC-AGCTTTGAGGA..........................................................	19	2	97.50	195	24	2	1	8	2	158	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGG..........................................................	21	3	91.67	275	167	17	11	6	7	67	0
..................................................................GTCTTCAAAGTGGCGGTGACA...................................................................................................	21	1	87.00	87	42	2	0	0	7	36	0
............................................................................................................TCACAGCC-AGCTTTGAGGAGCGTT.....................................................	24	1	81.00	81	10	1	3	4	22	41	0
..........................................................................................................TATCACAGCC-AGCTTTGAGAG..........................................................	21	3	80.33	241	126	1	0	2	8	104	0
................................................................................................................AGCC-AGCTTTGAGGAGCG.......................................................	18	2	78.50	157	3	2	1	8	36	107	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGCGTG.....................................................	26	1	78.00	78	1	0	3	2	7	65	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGTT.......................................................	24	4	77.25	309	35	3	18	3	81	169	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGAA.......................................................	24	2	73.00	146	38	4	2	0	15	86	1
...........................................................................................................ATCACAGCC-AGCTTTGAGGAGT........................................................	22	2	53.00	106	97	2	1	0	3	3	0
..........................................................................................................TATCACAGCC-AGCTTTGAGGAGTA.......................................................	24	2	50.00	100	8	0	3	0	19	57	13
...............................................................................................................CAGCC-AGCTTTGAGGAGCG.......................................................	19	2	47.00	94	2	1	0	15	6	38	32
.............................................................................................................CACAGCC-AGCTTTGAGGAGC........................................................	20	2	47.00	94	22	32	0	2	10	22	6
.............................................................................................................CACAGCC-AGCTTTGAGGAGCG.......................................................	21	2	45.50	91	9	9	2	3	14	54	0
.........................................................................................................ATATCACAGCC-AGCTTTGAGGAG.........................................................	23	2	45.00	90	74	0	0	0	0	1	15
...........................................................................................................ATCACAGCC-AGCTTTGAGGAGA........................................................	22	2	40.00	80	73	0	1	0	0	5	1

dpe_158

scaffold_1:5401859-5401910 +

Known Ortholog

Canonical miRNA

intergenic

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-40.4	-40.4	-40.1