ID:

dpe_1559

 Coordinate:

scaffold_4:871291-871477 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dper_GLEANR_18978:2]; CDS [Dper\GL17170-cds]; CDS [Dper\GL17170-cds]; exon [dper_GLEANR_18978:1]; intron [Dper\GL17170-in]

No Repeatable elements found

Sense Strand Reads

##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GCTTGTCGGTGTCGCTGTCTGGCTGAGCGGAAATGCCAGTGGCCAGAGAGGTAAGATTTGAGACGGGGTGTCCTTGGAAGAGCATACTCTGATCACAGGTCCAAAGGAGCAGCTATCAACCCATTCGGAGTGATAAGAACGTACTACTAATCCCCCTGATATGTCATTAGGATTTATTGTGCCCTCCACTAGGGAAATCGAAAATCAGCGATCCTATAGCTCCTTCCCTTTTTGTAGATCATCCACGAAAATGGGGCAGCGGTGAGCCGCATCCCATCAAATATGTG
**************************************************....((((((.((((((((((.(((....))).)))))))).)).))))))..(((((((...(((((..((....))..))))).((..((((....(((((...(((....)))...)))))....))))..))...((((...((((........))))))))..)))))))............************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V042
embryo
 M021
embryo
 V111
male body		 V057
head
 V050
head
................................................................................................................................................................................................................................................ATCCACGAAAATGGGGCAGC........................... 20 0 1 1.00 1 1 0 0 0 0 0
..TTGTCGGTGTCGCTGTCTGGC........................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0
..........................GCGGAAATGCCAGTGGCCAGAG............................................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
.....................GCTGAGCGGAAATGCCAGTGGC.................................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 1 0 0
...TGTCGGTGTCGCTGTCTGG......................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0
....GTCGGTGTCGCTGTCTGGCTGAGC................................................................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0
..TTGTCGGTGTCGCTGTCC........................................................................................................................................................................................................................................................................... 18 1 4 0.25 1 0 0 1 0 0 0
................GTCTGGCTGAGGGGAACGG............................................................................................................................................................................................................................................................ 19 3 20 0.15 3 2 0 0 1 0 0
...............................................................................................................................................................................................................................TTCGCGTTTTTTAGATCATC............................................ 20 3 8 0.13 1 0 0 0 0 0 1
...TGTCGGTGTGGTTGGCTGGCTG...................................................................................................................................................................................................................................................................... 22 3 14 0.07 1 0 0 0 0 1 0
...TGGCAGTGTCGCTATCTGGC........................................................................................................................................................................................................................................................................ 20 3 20 0.05 1 0 0 0 0 1 0
..................................................................GGTGTCCTTGGATGAGCCA.......................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 1 0

Anti-sense strand reads

CGAACAGCCACAGCGACAGACCGACTCGCCTTTACGGTCACCGGTCTCTCCATTCTAAACTCTGCCCCACAGGAACCTTCTCGTATGAGACTAGTGTCCAGGTTTCCTCGTCGATAGTTGGGTAAGCCTCACTATTCTTGCATGATGATTAGGGGGACTATACAGTAATCCTAAATAACACGGGAGGTGATCCCTTTAGCTTTTAGTCGCTAGGATATCGAGGAAGGGAAAAACATCTAGTAGGTGCTTTTACCCCGTCGCCACTCGGCGTAGGGTAGTTTATACAC
**************************************************....((((((.((((((((((.(((....))).)))))))).)).))))))..(((((((...(((((..((....))..))))).((..((((....(((((...(((....)))...)))))....))))..))...((((...((((........))))))))..)))))))............************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V111
male body		 V042
embryo
 V057
head
.......................................................................................................................................................................................................................................AACACGTAGTAGGTGCTTTT.................................... 20 2 5 0.20 1 1 0 0 0
..................................................................................GTATGTGACTAGTGTGCA........................................................................................................................................................................................... 18 2 6 0.17 1 0 1 0 0
...................................................................................................AGGTTTCCTCTTGGATAG.......................................................................................................................................................................... 18 2 11 0.09 1 0 0 1 0
..............................................................................................................................................TGGTGATTGGGGGGACGAT.............................................................................................................................. 19 3 16 0.06 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_4:871241-871527 - dpe_1559 GCTTGTCGGTGTCGCTGTCTGGCTGAGCGGAAATGCCAGTGGCCAGAGAGGTAAGATTTGAGACGGGGTGTCCTTGGAAGAGCATACTCTGATCACAGGTCCAAAGGAGCAGCTATCAACCCATTCGGAGTGATAAGAACGTACTACTAATCCCCCTGATATGTCATTAG---------------------------------GATTTAT-------TGTGCCCTCCACTAGGGAAATCGAAAATCAG-CGATCCTATAGCTCCTTC--------CCTTTTTGTAGATCATCCACGAAA--ATGGGG---CAGCGGTGAGCCGCATCCCATCAAATATGTG
dp5 3:15890486-15890772 + dps_1237 GCTAGTCGGTGTCGCTGTCTGGCTGAGCGGAAGTGCCAGTGGCCAGAGAGGTAAGATTTGAGACGGGGTGTCCTTGGAAGAGCATACTCTGATCACAGGTCCAAAGGAGCAGCTATCAACCCATTCGGAGTGATAAGAACGTACTACTAATCCCCCTGATATGTCATTAG---------------------------------GATTTAT-------TGTGCCCTCCACTGGGGAAATCGAAAATCAG-CGATCCTATAGCTCCTTC--------CCTTTTTGTAGATCATCCACGAAA--ATGGGG---CAGCGGTGAGCCGCATCCCATCAAATATGTG
droWil2 scf2_1100000004513:3314022-3314046 + TG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATCGCATAACGTCGTTTATGAG
droVir3 scaffold_10324:547278-547318 + GATTCTC------------------CACGGAAGTGGCCACCGATAAGTACAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGCCG
droMoj3 scaffold_6496:2061235-2061248 + CCGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATTTGAG
droGri2 scaffold_15245:15377210-15377229 - CGCTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTGTGAAGAACCCT
droAna3 scaffold_13266:175356-175416 - CCTCATC---ATAGCCGCTTGCCTCAACGCGAGTGTCTTGGGAGACAGAGGTAAGGATTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAC
droBip1 scf7180000396740:2905-2985 - AAATCAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACTGGCTGATCCTCCAGCTCC-----------------TGCTGCTGACCCTTCTCA--ATG-------CGTCCTATGCCGCACTCAAAGAATCATCAG
droKik1 scf7180000302476:838323-838544 + TTCTTGG----------------------------------------------------------------------AA-AATAAATTCTTATCAGAGAGTCA----------TGCTAACCCTTGCGTAGAGATAAGACT---CCCGTAATCCCGGTGATATATTAGAAATCCGCCA--------------AGTCCCCGAAGTGATTTATAGAGGTTTCAGCCTTCCACAAG---------------T-GTTTCTTACATATTCTTC---GTCTTTCATTTGGCAGACCACCCGCGAGG--TCGTTCCTTCGATCCCGAAGATCATCCCATCAAGTATGCC
droFic1 scf7180000454038:733205-733306 + TGCTCCCAGCCAGG---------------------------------------------------------------------------------------------------------------C--------------------------------------------------------------------------------------------------------------------AAATGC-CGATCCTGCTGCTCCTCC--------TCCCCCTGATCCTGATCCCCGTCAGCCTGGTG---GAATCTCGGGCCACCGTGGAACAACCGGCTG
droEle1 scf7180000491107:1663465-1663559 - AACCTGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCCTGAAAACGCCTTCGATT-TGTCTCTCTTTCAGACCATCCCCGCGG--ACGCTCCTTCGATGCCGAATCGCATCCCGTCAAGCATCCG
droRho1 scf7180000777217:336850-336946 + AAAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG-CCGCCTTAAAACCCCCTCCATTTTCTCCATTTTGCAGATCACCCACGTGG--CCGTTCTTTCGATGCCGCAGCGCATCCCATCAAGCATCCG
droBia1 scf7180000301506:1270952-1271028 - CCCTTAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---------TTCTCCCCCTTTTCAGACCACCCACGTGG--CCGGTCCTTCGACGCCGAATCGCATCCCATCAAGCAGGCG
droTak1 scf7180000415401:511771-511824 + GCTTTTC---GTCGCGATTTCGCTGAGCGGAAATGCCAGCGGTCAGAGAGGTAAGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T
droEug1 scf7180000409209:715223-715425 - GCCGTTA---------------------------------------------------------------------------------------------------------------AACCACGCACGGAGATAAGACT---CTATTAATCCCATTGATATATTAGTAAGCCCCTGGGCTTAATAATTTATGTTCCTTAA-------AC-------TATTTTCTACCAAATGGAAATCTCCACATAT-ACCTAATATAATTTTT-------TGGCATTTTTTCAGACCACCCACGTGG--CCGCTCTTTCGATGCCGAATCGCACCCCATCAAGTTTGCG
dm3 chr2R:5449227-5449280 + GCTCGTC---TTAGCTGTCTGCCTGAGCGGAAGTGCCAGCGGACAAAGAGGTAAGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T
droSim2 2r:6234259-6234312 + GCTCGTC---GTAGCTGTCTGCCTGAGCGGAAGTGCCAGCGGACAAAGAGGTAAGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T
droSec2 scaffold_1:3063841-3063894 + GCTCGTC---TTAGCTGTCTGCCTGAGCGGAAGTGCCAGCGGACAAAGAGGTAAGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T
droYak3 2L:18080385-18080438 + CCTCGTC---ATAGCTGTCTGCCTGAGCGGAAGTGTCAGCGGCCAAAGAGGTAAAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T
droEre2 scaffold_4929:8907230-8907281 - GCTCGTC---GTAGCTGTCTGCCTGAGCGGAATCGCCAGCGGACAAAGAGGTAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
GCTTGTCGGTGTCGCTGTCTGGCTGAGCGGAAATGCCAGTGGCCAGAGAGGTAAGATTTGAGACGGGGTGTCCTTGGAAGAGCATACTCTGATCACAGGTCCAAAGGAGCAGCTATCAACCCATTCGGAGTGATAAGAACGTACTACTAATCCCCCTGATATGTCATTAG---------------------------------GATTTAT-------TGTGCCCTCCACTAGGGAAATCGAAAATCAG-CGATCCTATAGCTCCTTC--------CCTTTTTGTAGATCATCCACGAAA--ATGGGG---CAGCGGTGAGCCGCATCCCATCAAATATGTGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................................................................................................................................................................................................................................................................................................ATCCACGAAA--ATGGGG---CAGC...........................2011.001010000
..TTGTCGGTGTCGCTGTCTGGC..............................................................................................................................................................................................................................................................................................................................2111.001001000
..........................GCGGAAATGCCAGTGGCCAGAG.....................................................................................................................................................................................................................................................................................................2211.001010000
.....................GCTGAGCGGAAATGCCAGTGGC..........................................................................................................................................................................................................................................................................................................2211.001000001
...TGTCGGTGTCGCTGTCTGG...............................................................................................................................................................................................................................................................................................................................1911.001001000
....GTCGGTGTCGCTGTCTGGCTGAGC.........................................................................................................................................................................................................................................................................................................................2411.001100000
..TTGTCGGTGTCGCTGTCC.................................................................................................................................................................................................................................................................................................................................1840.251100000
dp5
GCTAGTCGGTGTCGCTGTCTGGCTGAGCGGAAGTGCCAGTGGCCAGAGAGGTAAGATTTGAGACGGGGTGTCCTTGGAAGAGCATACTCTGATCACAGGTCCAAAGGAGCAGCTATCAACCCATTCGGAGTGATAAGAACGTACTACTAATCCCCCTGATATGTCATTAG---------------------------------GATTTAT-------TGTGCCCTCCACTGGGGAAATCGAAAATCAG-CGATCCTATAGCTCCTTC--------CCTTTTTGTAGATCATCCACGAAA--ATGGGG---CAGCGGTGAGCCGCATCCCATCAAATATGTGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....GTCGGTGTCGCTGTCTGGCT.............................................................................................................................................................................................................................................................................................................................2011.0010100000000
.........TGTCGCTGTCTGGCTGAGC.........................................................................................................................................................................................................................................................................................................................1911.0010100000000
..........................................................................................GATCACAGGTCCAAAGGAGCA......................................................................................................................................................................................................................................2111.0010000001000
.......................TGAGCGGAAGTGCCAGTGGCCAGAGAG...................................................................................................................................................................................................................................................................................................2711.0010010000000
.......................TGAGCGGAAGTGCCAGTGGC..........................................................................................................................................................................................................................................................................................................2011.0010100000000
.....................GCTGAGCGGAAGTGCCAG..............................................................................................................................................................................................................................................................................................................1811.0010100000000
..............................................................................................................................................................................................................................................................................................ATCATCCACGAAA--ATGGGG---C..............................2011.0010100000000
.................................................................................................................................................................................................................................................................................................ATCCACGAAA--ATGGGG---CAGCG..........................2111.0010100000000
.............................GAAGTGCCAGTGGCCAGAGAG...................................................................................................................................................................................................................................................................................................2111.0010000100000
.................................................................................................................................................................................................................................................................................................ATCCACGAAA--ATGGGG---CAGC...........................2011.0010000100000
.............................................................................................................................................................................................................................................................................................GATCATCCACGAAA--ATGGGG---C..............................2111.0010100000000
droWil2
TG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATCGCATAACGTCGTTTATGAGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
GATTCTC------------------CACGGAAGTGGCCACCGATAAGTACAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGCCGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
CCGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATTTGAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
CGCTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTGTGAAGAACCCTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
CCTCATC---ATAGCCGCTTGCCTCAACGCGAGTGTCTTGGGAGACAGAGGTAAGGATTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................CAACGCGAGTGTCTTGGGAGACA......................................................................................................................................................................................................................................................................................................2315.005200021
..................TTGCCTCAACGCGAGTGTCTTGGGA..........................................................................................................................................................................................................................................................................................................2513.003000030
....................GCCTCAACGCGAGTGTCTTGGGAGACA......................................................................................................................................................................................................................................................................................................2712.002100001
...CATC---ATAGCCGCTTGCCTCAACGCGA.....................................................................................................................................................................................................................................................................................................................2612.002110000
................GCTTGCCTCAACGCGAGTGTCTTGGGA..........................................................................................................................................................................................................................................................................................................2712.002000020
...CATC---ATAGCCGCTTGCCTCAACGC.......................................................................................................................................................................................................................................................................................................................2412.002110000
.....................CCTCAACGCGAGTGTCTTGGGAGACA......................................................................................................................................................................................................................................................................................................2611.001000010
..........ATAGCCGCTTGCCTCAACGCGA.....................................................................................................................................................................................................................................................................................................................2211.001001000
..........ATAGCCGCTTGCCTCAACGC.......................................................................................................................................................................................................................................................................................................................2011.001000001
.................CTTGCCTCAACGCGAGTGTCTTGGG...........................................................................................................................................................................................................................................................................................................2511.001000010
....................GCCTCAACGCGAGTGTCTTGGGA..........................................................................................................................................................................................................................................................................................................2311.001000010
....................GCCTCAACGCGAGTGTCTTG.............................................................................................................................................................................................................................................................................................................2011.001000010
.................CTTGCCTCAACGCGAGTGTCTTGGGA..........................................................................................................................................................................................................................................................................................................2611.001000010
CCTCATC---ATAGCCGCTTGCCTC............................................................................................................................................................................................................................................................................................................................2211.001100000
.....................CCTCAACGCGAGTGTCTTGGGA..........................................................................................................................................................................................................................................................................................................2211.001100000
.CTCATC---ATAGCCGCTTGCCT.............................................................................................................................................................................................................................................................................................................................2011.001100000
........................CAACGCGAGTGTCTTGGGAGA........................................................................................................................................................................................................................................................................................................2111.001000010
.........................AACGCGAGTGTCTTGGGAGACA......................................................................................................................................................................................................................................................................................................2211.001000010
..................TTGCCTCAACGCGAGTGTCTTG.............................................................................................................................................................................................................................................................................................................2211.001000010
............................GCGAGTGTCTTGGGAGACA......................................................................................................................................................................................................................................................................................................1911.001000001
....................................CTTGGGAGACAGAGGTAAGGATTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A...2511.001000001
..........ATAGCCGCTTGCCTCAACG........................................................................................................................................................................................................................................................................................................................1911.001010000
.........................AACGCGAGTGTCTTGGGA..........................................................................................................................................................................................................................................................................................................1811.001001000
................................GTGTCTTGGGAGACAGAGACC................................................................................................................................................................................................................................................................................................2150.804000031
droBip1
AAATCAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACTGGCTGATCCTCCAGCTCC-----------------TGCTGCTGACCCTTCTCA--ATG-------CGTCCTATGCCGCACTCAAAGAATCATCAGSizeHit CountTotal NormTotal
No Reads
droKik1
TTCTTGG----------------------------------------------------------------------AA-AATAAATTCTTATCAGAGAGTCA----------TGCTAACCCTTGCGTAGAGATAAGACT---CCCGTAATCCCGGTGATATATTAGAAATCCGCCA--------------AGTCCCCGAAGTGATTTATAGAGGTTTCAGCCTTCCACAAG---------------T-GTTTCTTACATATTCTTC---GTCTTTCATTTGGCAGACCACCCGCGAGG--TCGTTCCTTCGATCCCGAAGATCATCCCATCAAGTATGCCSizeHit CountTotal NormTotal
No Reads
droFic1
TGCTCCCAGCCAGG---------------------------------------------------------------------------------------------------------------C--------------------------------------------------------------------------------------------------------------------AAATGC-CGATCCTGCTGCTCCTCC--------TCCCCCTGATCCTGATCCCCGTCAGCCTGGTG---GAATCTCGGGCCACCGTGGAACAACCGGCTGSizeHit CountTotal NormTotal
No Reads
droEle1
AACCTGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCCTGAAAACGCCTTCGATT-TGTCTCTCTTTCAGACCATCCCCGCGG--ACGCTCCTTCGATGCCGAATCGCATCCCGTCAAGCATCCGSizeHit CountTotal NormTotal
No Reads
droRho1
AAAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG-CCGCCTTAAAACCCCCTCCATTTTCTCCATTTTGCAGATCACCCACGTGG--CCGTTCTTTCGATGCCGCAGCGCATCCCATCAAGCATCCGSizeHit CountTotal NormTotal
No Reads
droBia1
CCCTTAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---------TTCTCCCCCTTTTCAGACCACCCACGTGG--CCGGTCCTTCGACGCCGAATCGCATCCCATCAAGCAGGCGSizeHit CountTotal NormTotal
No Reads
droTak1
GCTTTTC---GTCGCGATTTCGCTGAGCGGAAATGCCAGCGGTCAGAGAGGTAAGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TSizeHit CountTotal NormTotal
No Reads
droEug1
GCCGTTA---------------------------------------------------------------------------------------------------------------AACCACGCACGGAGATAAGACT---CTATTAATCCCATTGATATATTAGTAAGCCCCTGGGCTTAATAATTTATGTTCCTTAA-------AC-------TATTTTCTACCAAATGGAAATCTCCACATAT-ACCTAATATAATTTTT-------TGGCATTTTTTCAGACCACCCACGTGG--CCGCTCTTTCGATGCCGAATCGCACCCCATCAAGTTTGCGSizeHit CountTotal NormTotal
No Reads
dm3
GCTCGTC---TTAGCTGTCTGCCTGAGCGGAAGTGCCAGCGGACAAAGAGGTAAGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................AGTGCCAGCGGACAAAGAGAC.................................................................................................................................................................................................................................................................................................2119.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000310000000
.............................GAAGTGCCAGCGGACAAAGAG...................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GTGCCAGCGGACAAAGAGAC.................................................................................................................................................................................................................................................................................................2015.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000400000000
.............................GAAGTGCCAGCGGACAAAGAGAC.................................................................................................................................................................................................................................................................................................2315.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000000
.............................GAAGTGCCAGCGGACAAA......................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................GAAGTGCCAGCGGACAAAGAGA..................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...............................AGTGCCAGCGGACAAAGAGGT.................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000101000000000
.............................GAAGTGCCAGCGGACAAAGA....................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TAGCTGTCTGCCTGAGCGGAAG....................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000
..............................AAGTGCCAGCGGACAAAGAGA..................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
...............................AGTGCCAGCGGACAAAGAG...................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000001000000
..........TTAGCTGTCTGCCTGAGCGGA......................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000
...CGTC---TTAGCTGTCTGCCTGAGC.........................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GTGCCAGCGGACAAAGAGA..................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...........TAGCTGTCTGCCTGAGCGGAA.....................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
............................GGAAGTGCCAGCGGACAAAGAGAC.................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................AAGTGCCAGCGGACAAAGAGAC.................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................GTCTGCCTGAGCGGAAGTGCCA...............................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.............................GAAGTGCCAGCGGACAAAGAGACC................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...........TAGCTGTCTGCCTGAGC.........................................................................................................................................................................................................................................................................................................................1712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CGTC---TTAGCTGTCTGCCTGAGCGG.......................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AGCGGAAGTGCCAGCGGACA........................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................AGTGCCAGCGGACAAAGAGACC................................................................................................................................................................................................................................................................................................2221.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000
............................GGAAGTGCCAGCGGACAAAGA....................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TGTCTGCCTGAGCGGAAGTGCCAGCGG...........................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
......................CTGAGCGGAAGTGCCAGCGGACAA.......................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GCTGTCTGCCTGAGCGGAAGTGCC................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GTCTGCCTGAGCGGAAGTGCC................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........................GAGCGGAAGTGCCAGCGGACAAAGA....................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............AGCTGTCTGCCTGAGCGGAA.....................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..............CTGTCTGCCTGAGCGGAAG....................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............CTGTCTGCCTGAGCGGAAGTGCCAGC.............................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...........TAGCTGTCTGCCTGAGCGG.......................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...............................AGTGCCAGCGGACAAAGAGA..................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GCCTGAGCGGAAGTGCCAGC.............................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GTGCCAGCGGACAAAGAG...................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000
......C---TTAGCTGTCTGCCTGA...........................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CTGCCTGAGCGGAAGTGCCAGCGGAC.........................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GTCTGCCTGAGCGGAAGTGCCAGCGGA..........................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.................TCTGCCTGAGCGGAAGTGCCC...............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
...CGTC---TTAGCTGTCTGCCT.............................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......C---TTAGCTGTCTGCCTGAGCG........................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CCTGAGCGGAAGTGCCAGCGG...........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AGCGGAAGTGCCAGCGGACAAAGAG...................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
......C---TTAGCTGTCTGCCTGAGCGGAA.....................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CTGCCTGAGCGGAAGTGCCAGC.............................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GTC---TTAGCTGTCTGCCTGAGCGGAA.....................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TTAGCTGTCTGCCTGAGCGGAA.....................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CGTC---TTAGCTGTCTGCCTGAGCG........................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CTGTCTGCCTGAGCGGAAGTGCC................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
....................................CAGCGGACAAAGAGGTAAGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..................CTGCCTGAGCGGAAGTGCC................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................AAGTGCCAGCGGACAAAGA....................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..............................AAGTGCCAGCGGACAAAGAGG..................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TCTGCCTGAGCGGAAGTGCCA...............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
................................GTGCCAGCGGACAAAGAGGTAAGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.................TCTGCCTGAGCGGAAGTGCCAGC.............................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GCCTGAGCGGAAGTGCCAGCGGAC.........................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GCTGTCTGCCTGAGCGGAAG....................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
............AGCTGTCTGCCTGAGCGGAAG....................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
............AGCTGTCTGCCTGAGCGGAAGTGCCAGC.............................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..TCGTC---TTAGCTGTCTGCCT.............................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GTGCCAGCGGACAAAGAGACC................................................................................................................................................................................................................................................................................................2140.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TGCCAGCGGACAAAGAGAC.................................................................................................................................................................................................................................................................................................1950.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GCTCGTC---GTAGCTGTCTGCCTGAGCGGAAGTGCCAGCGGACAAAGAGGTAAGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........GTAGCTGTCTGCCTGAGCGGAA.....................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
..............................AAGTGCCAGCGGACAAAGAGA..................................................................................................................................................................................................................................................................................................2111.00100010000000000000
....GTC---GTAGCTGTCTGCCTGAGC.........................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
.............................GAAGTGCCAGCGGACAAAGA....................................................................................................................................................................................................................................................................................................2011.00100100000000000000
......................CTGAGCGGAAGTGCCAGC.............................................................................................................................................................................................................................................................................................................1811.00100010000000000000
......C---GTAGCTGTCTGCCTGAGC.........................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
..............................AAGTGCCAGCGGACAAAGAGACC................................................................................................................................................................................................................................................................................................2330.33100100000000000000
droSec2
GCTCGTC---TTAGCTGTCTGCCTGAGCGGAAGTGCCAGCGGACAAAGAGGTAAGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................CTGCCTGAGCGGAAGTGCCAGC.............................................................................................................................................................................................................................................................................................................2213.0030021
................GTCTGCCTGAGCGGAAGTGCCAGC.............................................................................................................................................................................................................................................................................................................2412.0020020
...............TGTCTGCCTGAGCGGAAGTGCC................................................................................................................................................................................................................................................................................................................2211.0010010
...........TAGCTGTCTGCCTGAGCGGAAGTGCCAGC.............................................................................................................................................................................................................................................................................................................2911.0010100
.............................GAAGTGCCAGCGGACAAA......................................................................................................................................................................................................................................................................................................1811.0011000
...........TAGCTGTCTGCCTGAGCGGAAG....................................................................................................................................................................................................................................................................................................................2211.0010100
.............................GAAGTGCCAGCGGACAAAGAGACC................................................................................................................................................................................................................................................................................................2411.0010010
....GTC---TTAGCTGTCTGCCTGAGC.........................................................................................................................................................................................................................................................................................................................2111.0010010
................GTCTGCCTGAGCGGAAGTGCCAGCGGA..........................................................................................................................................................................................................................................................................................................2711.0010010
....GTC---TTAGCTGTCTGCCTGAGCGGAAG....................................................................................................................................................................................................................................................................................................................2611.0010010
..................CTGCCTGAGCGGAAGTGCCA...............................................................................................................................................................................................................................................................................................................2011.0010010
droYak3
CCTCGTC---ATAGCTGTCTGCCTGAGCGGAAGTGTCAGCGGCCAAAGAGGTAAAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................GAAGTGTCAGCGGCCAAAGAGAC.................................................................................................................................................................................................................................................................................................2315.00502100020000
......C---ATAGCTGTCTGCCTGAGCG........................................................................................................................................................................................................................................................................................................................2015.00501000040000
.............................GAAGTGTCAGCGGCCAAAGA....................................................................................................................................................................................................................................................................................................2015.00500100040000
..........ATAGCTGTCTGCCTGAGCGGA......................................................................................................................................................................................................................................................................................................................2114.00400010030000
...CGTC---ATAGCTGTCTGCCTGAGCGGAA.....................................................................................................................................................................................................................................................................................................................2614.00404000000000
.............................GAAGTGTCAGCGGCCAAAGAGA..................................................................................................................................................................................................................................................................................................2213.00301000020000
...............................AGTGTCAGCGGCCAAAGAGA..................................................................................................................................................................................................................................................................................................2013.00300000030000
................................GTGTCAGCGGCCAAAGAGACC................................................................................................................................................................................................................................................................................................2122.00403000010000
.............................GAAGTGTCAGCGGCCAAAGAG...................................................................................................................................................................................................................................................................................................2112.00200000020000
................................GTGTCAGCGGCCAAAGAGA..................................................................................................................................................................................................................................................................................................1912.00201000010000
................GTCTGCCTGAGCGGAAGTGTCAGC.............................................................................................................................................................................................................................................................................................................2412.00200000020000
..........ATAGCTGTCTGCCTGAGCG........................................................................................................................................................................................................................................................................................................................1912.00201000010000
...CGTC---ATAGCTGTCTGCCTGAGCGGA......................................................................................................................................................................................................................................................................................................................2512.00202000000000
..................CTGCCTGAGCGGAAGTGTCAGC.............................................................................................................................................................................................................................................................................................................2212.00201000010000
...CGTC---ATAGCTGTCTGCCTGAGCG........................................................................................................................................................................................................................................................................................................................2311.00101000000000
...............................AGTGTCAGCGGCCAAAGAGACC................................................................................................................................................................................................................................................................................................2211.00101000000000
....GTC---ATAGCTGTCTGCCTGAGCGGAA.....................................................................................................................................................................................................................................................................................................................2511.00101000000000
....GTC---ATAGCTGTCTGCCTGAGC.........................................................................................................................................................................................................................................................................................................................2111.00101000000000
..........ATAGCTGTCTGCCTGAGCGGAA.....................................................................................................................................................................................................................................................................................................................2211.00100000010000
....GTC---ATAGCTGTCTGCCTGAGCGGA......................................................................................................................................................................................................................................................................................................................2411.00101000000000
...........TAGCTGTCTGCCTGAGCGGAAGT...................................................................................................................................................................................................................................................................................................................2311.00100000010000
.............................GAAGTGTCAGCGGCCAAAGAGACC................................................................................................................................................................................................................................................................................................2411.00100000010000
......C---ATAGCTGTCTGCCTGAGCGG.......................................................................................................................................................................................................................................................................................................................2111.00100100000000
......C---ATAGCTGTCTGCCTGAGC.........................................................................................................................................................................................................................................................................................................................1911.00101000000000
...............TGTCTGCCTGAGCGGAAGTGTCAGC.............................................................................................................................................................................................................................................................................................................2511.00100000010000
...............................AGTGTCAGCGGCCAAAGAGAC.................................................................................................................................................................................................................................................................................................2111.00100000010000
......................CTGAGCGGAAGTGTCAGC.............................................................................................................................................................................................................................................................................................................1811.00100100000000
....GTC---ATAGCTGTCTGCCTGAGCG........................................................................................................................................................................................................................................................................................................................2211.00101000000000
............................GGAAGTGTCAGCGGCCAAAGAGAC.................................................................................................................................................................................................................................................................................................2411.00101000000000
.....TC---ATAGCTGTCTGCCTGAG..........................................................................................................................................................................................................................................................................................................................1911.00100000010000
................................GTGTCAGCGGCCAAAGAGAC.................................................................................................................................................................................................................................................................................................2011.00100000010000
....................GCCTGAGCGGAAGTGTCAGC.............................................................................................................................................................................................................................................................................................................2011.00100100000000
..............................AAGTGTCAGCGGCCAAAGA....................................................................................................................................................................................................................................................................................................1911.00100000010000
CCTCGTC---ATAGCTGTCTGCCTGAGC.........................................................................................................................................................................................................................................................................................................................2511.00100100000000
......C---ATAGCTGTCTGCCTGAGCGGA......................................................................................................................................................................................................................................................................................................................2211.00101000000000
..........................GCGGAAGTGTCAGCGGCCAAAGAGA..................................................................................................................................................................................................................................................................................................2511.00100100000000
...................TGCCTGAGCGGAAGTGTCAGCG............................................................................................................................................................................................................................................................................................................2211.00101000000000
.................................TGTCAGCGGCCAAAGAGACC................................................................................................................................................................................................................................................................................................20150.07100000010000
droEre2
GCTCGTC---GTAGCTGTCTGCCTGAGCGGAATCGCCAGCGGACAAAGAGGTAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...CGTC---GTAGCTGTCTGCCTGAGC.........................................................................................................................................................................................................................................................................................................................2211.0011000000
..............................AATCGCCAGCGGACAAAGAGAC.................................................................................................................................................................................................................................................................................................2211.0010000100
......................CTGAGCGGAATCGCCAGCGGAC.........................................................................................................................................................................................................................................................................................................2211.0010000100

Generated: 06/08/2015 at 04:22 PM