ID:

dpe_1550

 Coordinate:

scaffold_398:12865-13015 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.9 -15.9

Flybase annnotation

CDS [Dper\GL25500-cds]; exon [dper_GLEANR_8078:1]; intron [Dper\GL25500-in]

Repeatable elements

NameClassFamilyStrand
DMCR1ALINECR1-
mature
  1. scaffold_173:16357-16378 -
  2. scaffold_289:9117-9138 -
  3. dpe_1550  scaffold_398:12908-12929 -
  4. scaffold_8607:536-557 -
star
  1. scaffold_110:128571-128589 -
  2. scaffold_79:151206-151224 -
  3. scaffold_84:44071-44089 -
  4. scaffold_76:99209-99227 -
  5. scaffold_76:137676-137694 -
  6. scaffold_12:441850-441868 -
  7. scaffold_81:163857-163875 -
  8. scaffold_59:183333-183351 -
  9. scaffold_141:3920-3938 -
  10. scaffold_140:39749-39767 -
  11. scaffold_108:44652-44670 -
  12. scaffold_718:3929-3947 -
  13. scaffold_187:70262-70280 -
  14. scaffold_148:31919-31937 -
  15. dpe_1550  scaffold_398:12956-12974 -
  16. scaffold_3113:903-921 -
  17. scaffold_3238:197-215 -
  18. scaffold_395:9715-9733 -
  19. scaffold_5797:423-441 -
  20. scaffold_7164:444-462 -

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CCGTGGTGTCCGCAAGTTCGCTAGTTGTCCCGTCTATCCCGATCCCACCAGTAAATAGACGTTCCGGACCTCCGGATATTGCCACCACAGGTACTAGGCCTGTGGTGACTAAACCACTAGTGGGAGTCCCACCAAAACGGCAAGTTTTTGTTTCACGGCTGGCCCCTGACCTCACATCTAATGATGTAATTGCTTTTATTCAAAGCAAAATAAAAGCCGTGGGCTTAAAGGTGGNNNNNNNNNNNNNNNNN
*******************************************************************************************.......((.((((.(((.((((.....(((((...)))))...........))))..)))))))))********************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V042
embryo
...................................................TAAATAGACGTTCCGGACCTCCGAA............................................................................................................................................................................... 25 1 20 0.75 15 0 15 0
........................................................................................................................................ACGGCAAGTTTTTGTTTCACGG............................................................................................. 22 0 4 0.50 2 2 0 0
........................................................................................................................................ACGGCAAGTTTTTGTTTCACG.............................................................................................. 21 0 4 0.25 1 1 0 0
..........CGCAAGTTCGCTAGTTGTCCCGTC......................................................................................................................................................................................................................... 24 0 20 0.20 4 4 0 0
........................................................................................................................................ACGGCAAGGTTTTGTTTCACGGCT........................................................................................... 24 1 7 0.14 1 1 0 0
..................................................................................................................................................................................................TTTATTCAAAGCAAAATAAAAGCC................................. 24 0 20 0.05 1 1 0 0
.................................................AGTAAATAGACGTTCCGGACCTCCGG................................................................................................................................................................................ 26 0 20 0.05 1 1 0 0
...........................................................................................TACTAGGCCTGTGGTGACT............................................................................................................................................. 19 0 20 0.05 1 0 0 1
..........................................................................................GTACTAGGCCTGTGGTGG............................................................................................................................................... 18 1 20 0.05 1 0 1 0
....................CTAGTTGTCCCGTCTATCCAGATCCC............................................................................................................................................................................................................. 26 1 20 0.05 1 1 0 0
..................................................GTAAATAGACGTTCCGGACCA.................................................................................................................................................................................... 21 1 20 0.05 1 1 0 0
..................CGCTAGTTGTCCCGTCTATCA.................................................................................................................................................................................................................... 21 1 20 0.05 1 1 0 0
..........CGCAAGTTCGCTAGTTGTCCCGCC......................................................................................................................................................................................................................... 24 1 20 0.05 1 1 0 0

Anti-sense strand reads

GGCACCACAGGCGTTCAAGCGATCAACAGGGCAGATAGGGCTAGGGTGGTCATTTATCTGCAAGGCCTGGAGGCCTATAACGGTGGTGTCCATGATCCGGACACCACTGATTTGGTGATCACCCTCAGGGTGGTTTTGCCGTTCAAAAACAAAGTGCCGACCGGGGACTGGAGTGTAGATTACTACATTAACGAAAATAAGTTTCGTTTTATTTTCGGCACCCGAATTTCCACCNNNNNNNNNNNNNNNNN
*********************************************************************************************.......((.((((.(((.((((.....(((((...)))))...........))))..)))))))))******************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V042
embryo
 M021
embryo
 V111
male body		 V057
head
..........................................................................................CATGATCCGGACACCACTGATTTGGT....................................................................................................................................... 26 0 20 3.80 76 73 3 0 0 0
........................................................................................................................ACCCTCAGGGTGGTTTTGCCGTTCAA......................................................................................................... 26 0 4 3.25 13 13 0 0 0 0
...........................................................................................ATGATCCGGACACCACTGATTTGGT....................................................................................................................................... 25 0 20 2.45 49 49 0 0 0 0
GGCACCACAGGCGTTCAAGC....................................................................................................................................................................................................................................... 20 0 20 2.10 42 41 1 0 0 0
.........................................................................................................................CCCTCAGGGTGGTTTTGCCGTTCAA......................................................................................................... 25 0 4 2.00 8 8 0 0 0 0
.....................................GGGCTAGGGTGGTCATTTAT.................................................................................................................................................................................................. 20 0 20 1.85 37 0 32 0 5 0
......................................GGCTAGGGTGGTCATTTATC................................................................................................................................................................................................. 20 0 20 1.75 35 35 0 0 0 0
.............................................................AAGGCCTGGAGGCCTATAACGGTGGT.................................................................................................................................................................... 26 0 20 1.60 32 0 32 0 0 0
...........................................................................................................................CTCAGGGTGGTTTTGCCGTTCAA......................................................................................................... 23 0 4 1.50 6 6 0 0 0 0
..................................TTAGGGCTAGGGTGGTCATTTAT.................................................................................................................................................................................................. 23 1 20 1.40 28 28 0 0 0 0
..........................................................................................................................CCTCAGGGTGGTTTTGCCGTTCAA......................................................................................................... 24 0 4 1.25 5 5 0 0 0 0
.......................................................................................................................CACCCTCAGGGTGGTTTTGCCGTTCAA......................................................................................................... 27 0 4 1.00 4 4 0 0 0 0
............................................................................................TGATCCGGACACCACTGATTTGGT....................................................................................................................................... 24 0 20 0.80 16 16 0 0 0 0
....................................AGGGCTAGGGTGGTCATTTATCT................................................................................................................................................................................................ 23 0 20 0.70 14 14 0 0 0 0
............................................................................................................................................................................................TAACGAAAATAAGTTTCGTTTTATT...................................... 25 0 20 0.60 12 12 0 0 0 0
..........................................................................................AATGATCCGGACACCACTGATTTGGT....................................................................................................................................... 26 1 20 0.60 12 12 0 0 0 0
.............................................................................................................................CAGGGTGGTTTTGCCGTTCAA......................................................................................................... 21 0 4 0.50 2 1 1 0 0 0
..............................................................................................................................AGGGTGGTTTTGCCGTTCAA......................................................................................................... 20 0 4 0.50 2 2 0 0 0 0
............................................................................................................................TCAGGGTGGTTTTGCCGTTCAA......................................................................................................... 22 0 4 0.50 2 1 0 1 0 0
.........................................................................................................................CCCTCAGGGTGGTTTTGCCGTTC........................................................................................................... 23 0 4 0.50 2 2 0 0 0 0
.......................................................................GGCCTATAACGGTGGTGTCCATGAT........................................................................................................................................................... 25 0 20 0.45 9 9 0 0 0 0
.GCACCACAGGCGTTCAAGCGAT.................................................................................................................................................................................................................................... 22 0 20 0.40 8 8 0 0 0 0
................................AGATAGGGCTAGGGTGTTCATTTAT.................................................................................................................................................................................................. 25 1 20 0.40 8 8 0 0 0 0
...............................................................................................................................................................................................CGAAAATAAGTTTCGTTTTATTT..................................... 23 0 20 0.35 7 7 0 0 0 0
....................................AGGGCTAGGGTGGTCATTTAT.................................................................................................................................................................................................. 21 0 20 0.35 7 0 0 0 7 0
.............................................................................................GATCCGGACACCACTGATTTGGT....................................................................................................................................... 23 0 20 0.35 7 7 0 0 0 0
.........................................................................................AAATGATCCGGACACCACTGATTTGGT....................................................................................................................................... 27 2 20 0.30 6 6 0 0 0 0
................................................................................................................................................................................AGATTACTACATTAACGAAAATAAGT................................................. 26 0 20 0.30 6 0 0 6 0 0
...................................TAGGGCTAGGGTGGTCATTTATC................................................................................................................................................................................................. 23 0 20 0.25 5 0 0 5 0 0
...........................................................................................ATGATCCGGACACCACTGATTTGG........................................................................................................................................ 24 0 20 0.25 5 5 0 0 0 0
.......................................................................................................................TACCCTCAGGGTGGTTTTGCCGTTC........................................................................................................... 25 1 4 0.25 1 0 1 0 0 0
..........................................................................................................................CCTCAGGGTGGTTTTGCCGTTCAAA........................................................................................................ 25 0 4 0.25 1 1 0 0 0 0
.............................................................................................................................CAGGGTGGTTTTGCCGTTCAAAAAC..................................................................................................... 25 0 4 0.25 1 1 0 0 0 0
............................................................................................................................TCAGGGTGGTTTTGCCGTTC........................................................................................................... 20 0 4 0.25 1 1 0 0 0 0
................................................................................................................................................................................................GAAAATAAGTTTCGTTTTATTT..................................... 22 0 20 0.25 5 5 0 0 0 0
.......................................................................................................................................TTGCCGTTCAAAAACAAAGT................................................................................................ 20 0 4 0.25 1 1 0 0 0 0
..........................................................................................................................TCTCAGGGTGGTTTTGCCGTTCAA......................................................................................................... 24 1 4 0.25 1 1 0 0 0 0
.............................................................................................................................CAGGGTGGTTTTGCCGTTCAAAAACAA................................................................................................... 27 0 4 0.25 1 1 0 0 0 0
........................................................................................................................................TGCCGTTCAAAAACAAAGTGCCGACC......................................................................................... 26 0 4 0.25 1 1 0 0 0 0
...........................................................................................................................ATCAGGGTGGTTTTGCCGTTCA.......................................................................................................... 22 1 5 0.20 1 1 0 0 0 0
.............................................................................................................................CAGGGGGGTTTGGCCGTTCAA......................................................................................................... 21 2 5 0.20 1 0 1 0 0 0
........................................................................................TCCATGATCCGGACACCACTGATT........................................................................................................................................... 24 0 20 0.20 4 4 0 0 0 0
...................................AATGGCTAGGGTGGTCATTTAT.................................................................................................................................................................................................. 22 2 20 0.20 4 4 0 0 0 0
GGCACCACAGGCGTTCAAGCGAT.................................................................................................................................................................................................................................... 23 0 20 0.20 4 0 4 0 0 0
........................................................................................................................ACCCTCAGGGTGGTTTTACCGTTCAA......................................................................................................... 26 1 5 0.20 1 1 0 0 0 0
.................................................................................................................................................................................GATTACTACATTAACGAAAATAAGTTT............................................... 27 0 20 0.20 4 4 0 0 0 0
.......................................................................................GTCCATGATCCGGACACCACTGAT............................................................................................................................................ 24 0 20 0.20 4 4 0 0 0 0
...................................................................................................................................................................................TTACTACATTAACGAAAATAAGTT................................................ 24 0 20 0.20 4 4 0 0 0 0
.........................................................................................................................CGCTCACGGTGGTTTTGCCGTTCAA......................................................................................................... 25 2 6 0.17 1 0 1 0 0 0
......................................CGCTAGGGTGGTCATTTAT.................................................................................................................................................................................................. 19 1 20 0.15 3 0 3 0 0 0
..............................................................................................ATCCGGACACCACTGATTTGGT....................................................................................................................................... 22 0 20 0.15 3 3 0 0 0 0
.....................................GGGCTAGGGTGGTCATTTATC................................................................................................................................................................................................. 21 0 20 0.15 3 0 1 0 2 0
..................................................................................................................................................................GGGGACTGGAGTGTAGATTAC.................................................................... 21 0 20 0.15 3 3 0 0 0 0
..................................ATAGGGCTAGGGTGGTCATTTAT.................................................................................................................................................................................................. 23 0 20 0.15 3 0 0 0 3 0
................................................................................................................................................................................AGATTACTACATTAACGAAAATAAG.................................................. 25 0 20 0.15 3 3 0 0 0 0
.....................................CGGCTAGGGTGGTCATTTAT.................................................................................................................................................................................................. 20 1 20 0.15 3 3 0 0 0 0
.............................................................AAGGCCTGGAGGCCTATAACGGTGGTGT.................................................................................................................................................................. 28 0 20 0.15 3 3 0 0 0 0
........................................................................................TCCATGATCCGGACACCACTGATTTGGT....................................................................................................................................... 28 0 20 0.15 3 3 0 0 0 0
..........................................................................................................................GATCAGGGTGGTTTTGACGTTCAAA........................................................................................................ 25 3 7 0.14 1 0 1 0 0 0
................................................................................................................................................................................AGATTACTACATTAACGAACATAAGTTT............................................... 28 1 20 0.10 2 2 0 0 0 0
........................................................................................TCCATGATCCGGACACCACTGAT............................................................................................................................................ 23 0 20 0.10 2 2 0 0 0 0
........................................................................................................................................................AGTGCCGACCGGGGACTGGAGTGT........................................................................... 24 0 20 0.10 2 2 0 0 0 0
........................................CTAGGGTGGTCATTTATCTGCA............................................................................................................................................................................................. 22 0 20 0.10 2 0 0 0 2 0
GGCACCACAGGCGATCAAGCGA..................................................................................................................................................................................................................................... 22 1 20 0.10 2 2 0 0 0 0
.............................................GTGGTCATTTATCTGCAAGGCCTGG..................................................................................................................................................................................... 25 0 20 0.10 2 2 0 0 0 0
..CACCACAGGCGTTCAAGCGATCAAC................................................................................................................................................................................................................................ 25 0 20 0.10 2 2 0 0 0 0
.............................................................................................GATCCGGACACCACTGATTTGGTGA..................................................................................................................................... 25 0 20 0.10 2 2 0 0 0 0
...................................................................................................................................................................GGGACTGGAGTGTAGATT...................................................................... 18 0 20 0.10 2 0 0 0 2 0
.................................................................................................................................................................................GATTACTACATTAACGAGAATAAGTT................................................ 26 1 20 0.10 2 2 0 0 0 0
....CCACAGGCGTTCAAGCGATCAACAG.............................................................................................................................................................................................................................. 25 0 20 0.10 2 0 0 2 0 0
...............................................................................................................................................CAAAAACAAAGTGCCGAGCGGGGACT.................................................................................. 26 1 20 0.10 2 2 0 0 0 0
.........................................................................................CCATGATCCGGACACCACTGATT........................................................................................................................................... 23 0 20 0.10 2 2 0 0 0 0
....CCACAGGCGTTCAAGCGAT.................................................................................................................................................................................................................................... 19 0 20 0.10 2 0 0 2 0 0
....................................................................................................................................................................GGACTGGAGTGTAGATTACTACAT............................................................... 24 0 20 0.10 2 2 0 0 0 0
.......................................GCTAGGGTGGTCATTTAT.................................................................................................................................................................................................. 18 0 20 0.10 2 0 2 0 0 0
.....................................................................................................................................................CAAAGTGCCGACCGGGGACTGGAGTGT........................................................................... 27 0 20 0.10 2 2 0 0 0 0
..........GCGTTCAAGCGATCAACAG.............................................................................................................................................................................................................................. 19 0 20 0.10 2 0 0 0 2 0
GGCACCACAGGCGTTCAAGCGATCAAC................................................................................................................................................................................................................................ 27 0 20 0.10 2 2 0 0 0 0
..................................AAAGGGCTAGGGTGGTCATTTATC................................................................................................................................................................................................. 24 1 20 0.10 2 2 0 0 0 0
........................................................................................AAAATGATCCGGACACCACTGATTTGGT....................................................................................................................................... 28 3 20 0.10 2 2 0 0 0 0
.......................................................................................................................................................AAGTGCCGACCGGGGACTGGAGT............................................................................. 23 0 20 0.10 2 2 0 0 0 0
..................................ATAGGGCTAGGGTGGTCATTTATC................................................................................................................................................................................................. 24 0 20 0.10 2 0 0 2 0 0
.............................GGCAGATAGGGCTAGGGTGGTCATT..................................................................................................................................................................................................... 25 0 20 0.10 2 2 0 0 0 0
................................................................................................................................AATGGTTTTGCCGTTCAA......................................................................................................... 18 2 12 0.08 1 0 0 1 0 0
.......................................................................................GTCCATGATCCGGACACCACTGAA............................................................................................................................................ 24 1 20 0.05 1 1 0 0 0 0
.GCACCACAGGCGTTCAAGCG...................................................................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0
.......................................GCTAGGGTGGTCATTTATCTG............................................................................................................................................................................................... 21 0 20 0.05 1 0 1 0 0 0
...............................AAGATAGGGCTAGGGTGGTCATTTA................................................................................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0
.................................TATAGGGCTAGGGTGGTCATTTATC................................................................................................................................................................................................. 25 1 20 0.05 1 1 0 0 0 0
............................GGGCAGATAGGGCTAGGGTGGT......................................................................................................................................................................................................... 22 0 20 0.05 1 0 1 0 0 0
.........................................................................................AAATGATCCGGACACCACTGATTTGG........................................................................................................................................ 26 2 20 0.05 1 1 0 0 0 0
.GCACCACAGGCGATCAAGCGA..................................................................................................................................................................................................................................... 21 1 20 0.05 1 1 0 0 0 0
...............................................................GGCCTGGAGGCCTATAACGGT....................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0
...............................CAGATAGGGCTAGGGTGGTCA....................................................................................................................................................................................................... 21 0 20 0.05 1 0 0 1 0 0
..............................GCAGATAGGGCTAGGGTGGTCATTTAT.................................................................................................................................................................................................. 27 0 20 0.05 1 0 0 1 0 0
...........................................................................................................................................................................................TTAACGAAAATAAGTTTCGTTTTAT....................................... 25 0 20 0.05 1 1 0 0 0 0
........................................CTAGGGTGGTCATTTATCTGCAAGGCCT....................................................................................................................................................................................... 28 0 20 0.05 1 1 0 0 0 0
.GCACCACAGGCGTTCAAGCGATCAAC................................................................................................................................................................................................................................ 26 0 20 0.05 1 1 0 0 0 0
................................................................................................................................................................................AGATTACTACATTAACGAAAATAAGTTC............................................... 28 1 20 0.05 1 1 0 0 0 0
.....................................TGGCTAGGGTGGTCATTGAT.................................................................................................................................................................................................. 20 2 20 0.05 1 0 1 0 0 0
.................................................................................................................................................................CGGGGACTGGAGTGTAGAT....................................................................... 19 0 20 0.05 1 1 0 0 0 0
......ACAGGCGTTCAAGCGATCAACAGGGC........................................................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0
.................................GATAGGGCTAGGGTGGTCATTTAT.................................................................................................................................................................................................. 24 0 20 0.05 1 0 0 0 0 1
.........................................................CTGCAAGGCCTGGAGGCCTATAA........................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0
...........................................................................................AAGATCCGGACACCACTGATTTGGT....................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0
................................................................................................................................................................CCGGGGACTGGAGTGTAG......................................................................... 18 0 20 0.05 1 0 0 0 1 0
GGCACCACAGGCGTTCAAGCGA..................................................................................................................................................................................................................................... 22 0 20 0.05 1 0 0 1 0 0
..........................................................................................AATGATCCGGACACCACTGATTTGG........................................................................................................................................ 25 1 20 0.05 1 1 0 0 0 0
..................................................................................................................................................................................ATTACTACATTAACGAAAATAAGT................................................. 24 0 20 0.05 1 1 0 0 0 0
..............................................................................................................................GGGTTGGTTTGGCCGTTCAA......................................................................................................... 20 3 20 0.05 1 0 1 0 0 0
...................................TAGGGCTAGGGTGGGCATTTATC................................................................................................................................................................................................. 23 1 20 0.05 1 1 0 0 0 0
................................................................................................................................................................................AGATTACTACATTAACGT......................................................... 18 1 20 0.05 1 1 0 0 0 0
..........................................................................................CATGATCCGGACACCACTGATTT.......................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0
.................................................................................................................................................................CGGGGACTGGAGTGTAGA........................................................................ 18 0 20 0.05 1 0 0 0 1 0
..................................TTAGGGCTAGGGTGGTCATTTAG.................................................................................................................................................................................................. 23 2 20 0.05 1 1 0 0 0 0
.............................GGCAGATAGGGCTAGGGTGG.......................................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0
............................................................CAAGGCCTGGAGGCCTATAGCGGTGGT.................................................................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0
.................................................TCATTTATCTGCAAGGCCTGGAGGCCT............................................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0
..........................CAGGGCAGATAGAGCTAGGGT............................................................................................................................................................................................................ 21 1 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................................TAGATTACTACATTAACGAAAATAAGTT................................................ 28 0 20 0.05 1 0 1 0 0 0
...........................................................................................ATGATCCGGACACCACCGATTTGGT....................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0
.....................................................................................................................................................................................ACTACATTAACGAAAATAAGT................................................. 21 0 20 0.05 1 1 0 0 0 0
.............................................................ATGGCCTGGAGGCCTATAACGGTGGT.................................................................................................................................................................... 26 1 20 0.05 1 0 1 0 0 0
........................................................................................TCCATGATCCGGACACCACTGA............................................................................................................................................. 22 0 20 0.05 1 1 0 0 0 0
.................................................................CCTGGAGGCCTATAACGGTGGTG................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0
....................................................TTTATCTGCAAGGCCTGGAGGCCT............................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0
................................AGATAGGGCTAGGGTGGTCATTTAT.................................................................................................................................................................................................. 25 0 20 0.05 1 0 0 1 0 0
....................................................................................................................................................................................................ATAAGTTTCGTTTTATTTTCGGC................................ 23 0 20 0.05 1 1 0 0 0 0
...............................................................................................................................................CAAAAACAAAGTGCCGACCGGGGAC................................................................................... 25 0 20 0.05 1 1 0 0 0 0
..........................................................................................CATGATCCGGACACAACTGATTTGGT....................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0
.........................................................................................CCATGATCCGGACACCACCGATTTGGT....................................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0
..................................................CATTTATCTGCAAGGCCTGGAGGCCT............................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0
.....................................GGGCTAGGGTGGTCATTTAG.................................................................................................................................................................................................. 20 1 20 0.05 1 1 0 0 0 0
.............................TGCAGATAGGGCTAGGGTGGTCATTTAT.................................................................................................................................................................................................. 28 1 20 0.05 1 1 0 0 0 0
...........................................................................................ACGATCCGGACACCACTGATTTGGT....................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0
................................................................................................................................................................................................GAAAATAAGTTTCGTTTTATT...................................... 21 0 20 0.05 1 1 0 0 0 0
...........................................GGGTGGTCATTTATCTGCAAGGCCTG...................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0
...................................TGGGGCTAGGGTGGTCATTTAT.................................................................................................................................................................................................. 22 1 20 0.05 1 0 0 1 0 0
.........................................................CTGCAAGGCCTGGAGGCCTATAAC.......................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0
............................................................................................................................................................CCGACCGGGGACTGGAGTGTAGATT...................................................................... 25 0 20 0.05 1 0 0 0 1 0
..................................ATAGGGCTAGGGTGTTCATCTAT.................................................................................................................................................................................................. 23 2 20 0.05 1 1 0 0 0 0
..............................GCAGATAGGGCTAGGGTGGTCAT...................................................................................................................................................................................................... 23 0 20 0.05 1 0 1 0 0 0
.................................................................................................................................................................................................AAAATAAGTTTCGTTTTAT....................................... 19 0 20 0.05 1 0 0 1 0 0
...................................AAGGGCTAGGGTGGTCATTT.................................................................................................................................................................................................... 20 1 20 0.05 1 1 0 0 0 0
.................................................................................................................................................................CGGGGACTGGAGTGTAGATTACTACA................................................................ 26 0 20 0.05 1 1 0 0 0 0
.............................................................AAGGCCTGGAGGCCTATAACGGT....................................................................................................................................................................... 23 0 20 0.05 1 0 1 0 0 0
...........CGTTCAAGCGATCAACAGGGC........................................................................................................................................................................................................................... 21 0 20 0.05 1 0 0 0 1 0
..................................................................................................................................................................GGGGACTGGAGTGTAGATT...................................................................... 19 0 20 0.05 1 1 0 0 0 0
..........................CAGGGCAGATAGGGCTAGGGT............................................................................................................................................................................................................ 21 0 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_398:12815-13065 - dpe_1550 CCGTGGTGTC-------CGCAAGT---TC---GCTAGTTGTCCCG-TCT--------------ATC-CCGATC------------CCACCAGT--AAATAGACGTTCCGGACCTCCGG---ATATTGCCACCACAGGTACTAGGCCTGTGGTGACTAAACCACTAGTGGGAGTCCCACCAAAAC-GGCAAGTTT-TTGTTTCACGGCTGGCCCCTGACCT-CACATCTAATGATGTAATTGCTTTTATTCAAAGCAAAATAAAAGCCGTG---GGCTTAAAGGTGGNNNNNNNNNNNNNNNNN
dp5 Unknown_singleton_4:1564-1797 + CCGTGGTGTC-------CGCACGT---TC---GCTAGTTGTCCCG-TCT--------------ATC-CCGATC------------CCACCAGT--AAATAGACGTTCCGGACCTCCGG---ATATTGCCACCACAGGTACTAGGCCTGTGGTGATTAAACCACTGGTGGGAGTCCCACCAAAAC-GACAAGTTT-TTGTTTCACGGCTGGCCCCTGACCT-CACATCTAATGATGTAATTGCTTTTATTCAAAGCAAAATAAAAGCCGTG---GGTTTAAAGGTGG-----------------
droWil2 scf2_1100000000206:4224-4445 - CCGATAGTTC-------TAAAAGTATTGAGGGCCCCGTA---------------AAC-----AAGT-TGACTG------------CTGCAGTG--GG-TGACTTGTCCAACGTTACTGCTGCGGCTGACGC---------------TTCGGGACCGCGGCCTCTCATTGGCATACCACCAAAGA-AACATATAT-TTGTTTCTAGGCTAGACCCTGTTGT-CACATCTGATGATGTAATAGCCTATATTCGGAAGAAAGTTAACGTCTCG---AATATTGCGGTGG-----------------
droVir3 scaffold_12936:171329-171562 + CGTAGATGTTC------CGAAAGCGCAACGCCAACAGTTA---AA-TTT--------------A---CAACAG------------TCGCTAGA--AGGTACGTCGTCCAAGCCACCGGCTGTTATAGGTACCACTGAT-----ACCTGTGGCGCCTAAGCCTCAAGTGGGTGTTCAACCAAAGA-GACACATAT-TTGTTTCAAGGCTTGCACCTCATTTCCTCATCAGAAGAGGGTAAAGCCTTCGTACAGGCAAAAATTCAAGCCACA---GGTATAACGGTG------------------
droAna3 scaffold_10530:6780-7015 - TTGTGG-------------------TATCGCTTCAAGTGATCCCA----GACCCAAT-----AATT-CAAACC------------CCAAACAGGACAATAAACCGTCCGGACCCCCGGTACGTACTGATGCCGCAGTATTAGTTCCGGCGGCACCAAAACCCTTGCAGGTGATCCCACCATCGA-AACACATTT-TTGTTTCCCGGCTTGCCCCTGATAC-TTCGGAGATTGATATCTCGGCTTACATAAAAGCCAAAACAAAAGTCGA------CATAAAGGTGG-----------------
droBip1 scf7180000395927:1163-1400 - AAGTGATGCCACAGGTCCCTA-----------GGGAACGAAAC--------CCCCAT-----TAAA-ATCACC------------CAAAATGG--TATTCCACAGTCCGGACCACCGGCACTTACTGATGCTGCAGTTCTCGTACCTGCGACACCAAAACCCTTACAGGTGATTCCTCCATCGA-AACATATAT-TTGTTTCTCGGCTTGCCCCTGATAC-TTCAGAGATTGATATCTCGGCTTATATCAAAGCCAAAACAAAAGCCGA------TATAAAGGTGG-----------------
droKik1 scf7180000302621:3059-3288 + CCGTTTTGTC-------CCCAAGTGC----C-AACAGTTGTCTTCGTAG--------------AGC-CCCATT----CCAGTTCCCTGCC--A--GGGTGTCAGGCCCGGACTACCGGCCGAAATTGGTATTGCGAATAATCAGCCTGCCTTTCCAAAACTCCTTATGGCAATACCACCAACGA-GACAGTTAG-TTGTTTCGCTGCTTTCCCCTGATCA-AACATCGGAAGATGTTATAGCTTTTATCCTAAGCACAACAAAAGCCG-----------------------------------
droFic1 scf7180000454072:577305-577556 + CCGATTTGTC-------CGAAGGTGGTTCTCAAAATGTAATTCCA-CCTAACCAACC-----AAAT-ATACCC------------CCACAAGA--GGCTTCTGAGACCGGACTACCGGCCCAAATTGCCACCGCAGGCCCACTGCCTGCAGTAGCAAAACCCCTCACAGTGGTTCCACAAATGA-GACAAATAT-TTGTTTCTCGGCTGGCCCCTGATCT-CACATCATTTGATGTCACGTCTTACATTAAAGACAAAATTAATGCCGAT---AAAGTAAAGGTGG-----------------
droEle1 scf7180000491101:4411-4575 - C-------------------------------------------------------------------------------------CACAAGA--GAATATTGAGTCCGGACTACCGGCCCAGGTTGGTTCTGCAAAAACTCAGTCTGCACTTCCAAAACCCCTTTCTGTGGTGCCACTGAAGA-AACAAACAT-TTGTTTCCTGGCTTTCCCCTACTCA-AATATCTATTGATGTGTTGTCTTATATTCAAAGC------------------------------------------------
droRho1 scf7180000759337:2836-3087 + CCGTAGTG----------------GTTTCACAATTAGTGGATCCA-CCTATCTCTCAGAATGTAGTATCACCA------------CCACAAGG--GACTACTGAGTCCGGACAACCGGCTCAAGTTGGTTCTGCAGAAACAATGTCTGCTCCACCAAAATCCCTTTTAGTGGTTCCACTAAAGA-AACAAATTT-TCGTTTCTCGGCTTTCCCCTGATCA-AACATCTTCTGATGTATTGTCTTATATACAAGACAAAACTAAAGCCGATTGTAGTGTAAAGGTGG-----------------
droTak1 scf7180000416013:1345-1582 - CCGTAGTA----------------GACCC---CCCTGTTGTTCCG-CCCATTTCTAA-----TAAC-TTGTCA------------CCTCCAGG--GAATGTTGAGTCCGGTCTACCGGCACAAGTTGGCGCTGCAGAAACTCAATCTGCAGTACCAA-ACCTCTTTCAGTGGTTCAACCCAAAA-AACAAATAT-TTATTTCTCG-TTTTCGCCTGACCA-AACGGCATCCGAGGTATTGGCCTATATACAGCACAAAACAAATGCCAAA---AACATTAAAGTGG-----------------
droEug1 scf7180000408093:5032-5271 + TCCTGGCTCC-------TACA-------------GAGC---------CAATCTCCAT-----TAAC-ATCAACCCACCCGATACACTGCAGGG--GAATTTCGTGCCCGGCCTACCGGCGTGCACTGGCGGTGCAGGACTAGAACCTGCTACACCAAAGCCCCTAAAGGTAATCCCATCTGAGA-AACATATAT-TTGTTTCCCGGCTTTCCGAGGATAC-GTCTGAGTCAGACGTATTGGCATACATGCAAGCCAGAACGAAAGCCGA------CATTAAGGTGG-----------------
dm3 chr2RHet:2311422-2311652 + CTGCACTG----------------GTTTCTCAACCAGTGATTCCA-TC------GAT-----TAGT-TTACCA------------CCACAAGG--GAACATTGAGACCGGACTACCGGCACAAATTGGCAC-----AAATACAATCTGCAGGGCCAAAGCCCCT-GCGGTGGTTCCACTAAAGA-AACAAATTT-TCGTTTCTCGGCTTTACCCTGATCA-AACATCGTCTGATGTATTGTCTTATATACAAGACAAAACAAAAGCCGAT---AATATAAAAGTGG-----------------
droSim2 2r:1985269-1985520 + CCGAATTGTC-------CGCATTGGTTTCTCAACCAGTGATTCCA-CCTGTCTCGAT-----TAGT-TTACCA------------CCACAAGG--GAACATTGAGTCCGGACTACCGGCACAAGTTGGCGCTTCAGAAATACAATCTGCAGCGCCAAAACCCCTCGCGGTGGTTCCACTAAAGA-AACAAATTT-TTGTTTCTCGGCTTGCCCCTGATCA-AACATCGTCGGATGTATTGTCTTATATACAAGACAAAACAAAAGCCGAT---AATATAAAAGTGG-----------------
droSec2 scaffold_67:107646-107897 - CCGAATTGTC-------TGCACTTGTTTCTCAACCAGTGATTCCA-CCTGTCTCGAT-----TAGT-TTACCG------------CCACAAGG--GAACATTGAGTCCGGACTACCGGCACAAGTTGGCGCTTCAGAAACACAATCTGCAGCGCCAAAACCCCTCGCGGTGGTTCCACTAAAGA-AACAAATTT-TTGTTTCTCGGCTTTCCCCTGATCA-AACATCGTCGGATGTATTGTCTTATATACAAGACAAAACAAAAGCCGAT---AATATAAAAGTGG-----------------
droYak3 v2_chrUn_299:5307-5545 - T------GTC-------CGCACTGGTTTCTCAACCGGTGATTCCA-CCCGTCCCGAA-----TTGT-TAACCA------------CCACAAAG--A-------AGTCCGGACTACCGGCTCAAGTTGGCACTTCAGAAATACAACCTGCAGTGCCAAAACCCCTCTCGGTGGTTCCACTAAAGA-AACAAATTT-TTGTTTCTCGGCTTTCCCCTGATCA-AACATCATCTGATGTACTGTCTTATATACAAGACAAAACAAAAGCCGAC---AACATAAAAGTGG-----------------
droEre2 scaffold_4845:7379665-7379910 + CTGCACTG----------------GTTTCTCAACCAGTGATTCCGATCTGTCCCGAT-----TAGT-TTACCC------------CCAAAAAG--GAATATTGAGTCCGGACTACTGGTGCAGATTGAGCCTTCAAAAACACAATCTGCAGTGCCAAAACTCCTCACGGTGTTTCCACTAAAAAAAATAAATTTGTGGTTTCTCGGATTTCCACTGACCA-AACATCATCTGATGTATTGTCTTATGTACAAGACAAAAGAAAAACCGAT---AACATAAATGTGG-----------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
CCGTGGTGTC-------CGCAAGT---TC---GCTAGTTGTCCCG-TCT--------------ATC-CCGATC------------CCACCAGT--AAATAGACGTTCCGGACCTCCGG---ATATTGCCACCACAGGTACTAGGCCTGTGGTGACTAAACCACTAGTGGGAGTCCCACCAAAAC-GGCAAGTTT-TTGTTTCACGGCTGGCCCCTGACCT-CACATCTAATGATGTAATTGCTTTTATTCAAAGCAAAATAAAAGCCGTG---GGCTTAAAGGTGGNNNNNNNNNNNNNNNNNSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................................................................................................................................................AC-GGCAAGTTT-TTGTTTCACGG.................................................................................................2240.502020000
......................................................................................................................................................................................AC-GGCAAGTTT-TTGTTTCACG..................................................................................................2140.251010000
.................CGCAAGT---TC---GCTAGTTGTCCCG-TC...............................................................................................................................................................................................................................................................24200.204040000
...................................................................................................................................................................................................................................................TTTATTCAAAGCAAAATAAAAGCC....................................24200.051010000
..........................................................................................AGT--AAATAGACGTTCCGGACCTCCGG---......................................................................................................................................................................................26200.051010000
.........................................................................................................................................TACTAGGCCTGTGGTGACT...................................................................................................................................................19200.051001000
........................................................................................................................................GTACTAGGCCTGTGGTGG.....................................................................................................................................................18200.051100000
...........................................................................................GT--AAATAGACGTTCCGGACCA.............................................................................................................................................................................................21200.051010000
............................C---GCTAGTTGTCCCG-TCT--------------ATC-A...........................................................................................................................................................................................................................................21200.051010000
dp5
CCGTGGTGTC-------CGCACGT---TC---GCTAGTTGTCCCG-TCT--------------ATC-CCGATC------------CCACCAGT--AAATAGACGTTCCGGACCTCCGG---ATATTGCCACCACAGGTACTAGGCCTGTGGTGATTAAACCACTGGTGGGAGTCCCACCAAAAC-GACAAGTTT-TTGTTTCACGGCTGGCCCCTGACCT-CACATCTAATGATGTAATTGCTTTTATTCAAAGCAAAATAAAAGCCGTG---GGTTTAAAGGTGG-----------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................................................................................T--AAATAGACGTTCCGGACCTCCG..........................................................................................................................................................................................232056.3011260680506010362630
.......................................................................................................................................................................................................TTCACGGCTGGCCCCTGACCT-C.................................................................................222023.60472046270201000
............................................................................................T--AAATAGACGTTCCGGACCTC............................................................................................................................................................................................212022.554511403000004250
.......................................................................................................................................................................................................TTCACGGCTGGCCCCTGACCT-CA................................................................................232017.40348034340001000
............................................................................................T--AAATAGACGTTCCGGACCTCCGG---......................................................................................................................................................................................242017.203440316000022240
.......................................................................................................................................................................................................TTCACGGCTGGCCCCTGACCT-..................................................................................212016.00320031460000000
............................................................................................T--AAATAGACGTTCCGGACCT.............................................................................................................................................................................................202014.252850266700001020
.......................................................................................................................................................................................................TTCACGGCTGGCCCCTGACC....................................................................................202014.00280027801100000
.......................................................................................................................................................................................................TTCACGGCTGGCCCCTGACCT-CACATC............................................................................272013.252650252120001000
.......................................................................................................................................................................................................TTCACGGCTGGCCCCTGACCT-CAC...............................................................................242010.65213021200001000
............................................................................................T--AAATAGACGTTCCGGACCTCCGG---ATA...................................................................................................................................................................................27207.50150014000101710
.........................................................................................CAGT--AAATAGACGTTCCGGACCT.............................................................................................................................................................................................23205.75115065601004300
.........................................................................................CAGT--AAATAGACGTTCCGGACCTCC...........................................................................................................................................................................................25205.70114017400008490
.........................................................................................CAGT--AAATAGACGTTCCGGACC..............................................................................................................................................................................................22205.50110000010010900
.......................................................................................................................................................................................................TTCACGGCTGGCCCCTGACCT-CACA..............................................................................25205.35107010601000000
............................................................................................T--AAATAGACGTTCCGGACCTCCGG---A.....................................................................................................................................................................................25205.15103082210001800
.........................................................................................CAGT--AAATAGACGTTCCGGACCTC............................................................................................................................................................................................24205.05101021001007180
.....................................................................................................................................................................................................GTTTCACGGCTGGCCCCTGACC....................................................................................22204.408808530000000
.........................................................................................CAGT--AAATAGACGTTCCGGACCTCCG..........................................................................................................................................................................................26204.1082017000006500
...........................TC---GCTAGTTGTCCCG-TCT--------------ATC-CCGA........................................................................................................................................................................................................................................25203.957907210002400
............................................................................................T--AAATAGACGTTCCGGACCTCC...........................................................................................................................................................................................22203.90780054200110110
............................................................................................T--AAATAGACGTTCCGGACC..............................................................................................................................................................................................19203.907806890100000
...........................TC---GCTAGTTGTCCCG-TCT--------------ATC-CCGATC------------..........................................................................................................................................................................................................................27203.306605860002000
............................................................................................T--AAATAGACGTTCCGGACCTCCGG---ATAT..................................................................................................................................................................................28203.256505700004400
...........................TC---GCTAGTTGTCCCG-TCT--------------ATC-CCG.........................................................................................................................................................................................................................................24203.056105810001010
...............................................................................................AAATAGACGTTCCGGACCTCC...........................................................................................................................................................................................21203.056106100000000
...................................................................................................................................................................................................................................................................TAAAAGCCGTG---GGTTTAAAGGTG..................23202.905804450205200
............................................................................................T--AAATAGACGTTCCGGACCTCCGG---AT....................................................................................................................................................................................26202.755504520000710
...............................................................................................AAATAGACGTTCCGGACCTC............................................................................................................................................................................................20202.655305210000000
...................................................................................................................................................................................................................................................................TAAAAGCCGTG---GGTTTAAAGGT...................22202.454904610101000
.........................................................................................CAGT--AAATAGACGTTCCGGAC...............................................................................................................................................................................................21202.354702980001090
...........................TC---GCTAGTTGTCCCG-TCT--------------ATC-CC..........................................................................................................................................................................................................................................23202.304604310000200
.....................................................................................................................................................................................................GTTTCACGGCTGGCCCCTGACCT-..................................................................................23202.204404400000000
.....................................................................................................................................................................................................GTTTCACGGCTGGCCCCTGAC.....................................................................................21201.953903630000000
........................................................................................................................................................................................................TCACGGCTGGCCCCTGACC....................................................................................19201.903803800000000
......................................................................................................................................................................................................TTTCACGGCTGGCCCCTGACC....................................................................................21201.903803620000000
....................................................................................................................................................................................................TGTTTCACGGCTGGCCCCTGACC....................................................................................23201.703403130000000
...................................................................................................................................................................................................................................................................TAAAAGCCGTG---GGTTTAAAGG....................21201.703402430005020
...................................................................................................................................................................................................................................................................TAAAAGCCGTG---GGTTTAAAGGTGG-----------------24201.653302700003120
............................................................................................T--AAATAGACGTTCCGGACCTCCGA---......................................................................................................................................................................................24201.553102330001400
.....................................................................................................................................................................................AAC-GACAAGTTT-TTGTTTCACGGC................................................................................................24201.452901500000950
.....................................................................................................................................................................................AAC-GACAAGTTT-TTGTTTCACGG.................................................................................................23201.4529011000001800
...........................TC---GCTAGTTGTCCCG-TCT--------------ATC-C...........................................................................................................................................................................................................................................22201.302602310001100
............................................................................................T--AAATAGACGTTCCGGACCTCCGT---......................................................................................................................................................................................24201.302601820000600
........................................................................................................................................................................................................TCACGGCTGGCCCCTGACCT-CACATC............................................................................26201.152302300000000
.......................................................................TC------------CCACCAGT--AAATAGACGTTCCGGACC..............................................................................................................................................................................................28201.152302020001000
.....................................................................................CCACCAGT--AAATAGACGTTCCGGACC..............................................................................................................................................................................................26200.901801100000520
......................................................................................................................................................................................................TTTCACGGCTGGCCCCTGAC.....................................................................................20200.901801800000000
............................................................................................T--AAATAGACGTTCCGGACCTT............................................................................................................................................................................................21200.851701600000100
..................................TAGTTGTCCCG-TCT--------------ATC-CCGATC------------C.........................................................................................................................................................................................................................24200.851701610000000
......................................................................................................................................................................................................TTTCACGGCTGGCCCCTGACCT-..................................................................................22200.751501500000000
...............................................................................................AAATAGACGTTCCGGACCTCCGG---ATA...................................................................................................................................................................................26200.601201200000000
.......................................................................................................................................................................................................TTCACGGCTGGCCCCTGACCT-CACATCT...........................................................................28200.601201020000000
....................................................................................................................................................................................................TGTTTCACGGCTGGCCCCTGACCT-..................................................................................24200.601201100001000
........................................................................................................................................................................................................TCACGGCTGGCCCCTGACCT-CAC...............................................................................23200.601201200000000
.....................................................................................................................................................................................................GTTTCACGGCTGGCCCCTGA......................................................................................20200.601201200000000
..................................TAGTTGTCCCG-TCT--------------ATC-CCGATC------------CC........................................................................................................................................................................................................................25200.551101001000000
.....................................................................................................................................................................................................GTTTCACGGCTGGCCCCTGACCT-CA................................................................................25200.551101100000000
.......................................................................................................................................................................................................TTCACGGCTGGCCCCTGACCT-CACAT.............................................................................26200.55110091100000
........................................................................................................................................................................................................TCACGGCTGGCCCCTGACCT-CACA..............................................................................24200.4590900000000
.....................................................................................................................................................................................AAC-GACAAGTTT-TTGTTTCACGGCT...............................................................................................25200.4590700000200
..........................................................................................AGT--AAATAGACGTTCCGGACC..............................................................................................................................................................................................21200.4590600000030
....................................................................................................................................................................................................................................................................AAAAGCCGTG---GGTTTAAAGGTG..................22200.4590800001000
......................................................................................CACCAGT--AAATAGACGTTCCGGACC..............................................................................................................................................................................................25200.4080610000010
......................................................................................................................................................................................................TTTCACGGCTGGCCCCTGACCT-C.................................................................................23200.4080700001000
....................................................................................................................................................................................................................................................TTATTCAAAGCAAAATAAAAGCC....................................23200.4080620000000
...........................................................................................................................................................TAAACCACTGGTGGGAGTCCCACC............................................................................................................................24200.4080710000000
.........................................................................................................................................................................................................CACGGCTGGCCCCTGACC....................................................................................18200.4080800000000
....................................................................................................................................................................................................................................................................AAAAGCCGTG---GGTTTAAAGGTGG-----------------23200.3570700000000
.........................................................................................CAGT--AAATAGACGTTCCGG.................................................................................................................................................................................................19200.3570010100320
............................................................................................T--AAATAGACGTTCCGGACCTCCGC---......................................................................................................................................................................................24200.3570430000000
.....................................................................................CCACCAGT--AAATAGACGTTCCGGAC...............................................................................................................................................................................................25200.3570600000010
............................................................................................................................TTGCCACCACAGGTACTAGGCCTG...........................................................................................................................................................24200.3570700000000
..........................................................................................AGT--AAATAGACGTTCCGGAC...............................................................................................................................................................................................20200.3570500000200
........................................................................................................................................................................................................TCACGGCTGGCCCCTGACCT-CACAT.............................................................................25200.3570700000000
......................................................................................................................................................................................................TTTCACGGCTGGCCCCTGACCT-CACATC............................................................................28200.3570610000000
..................................................................................................................................................................................................................................................................ATAAAAGCCGTG---GGTTTAAAGG....................22200.3570700000000
.........................................................................................CAGT--AAATAGACGTTCCGGA................................................................................................................................................................................................20200.3570600100000
...........................TC---GCTAGTTGTCCCG-TCT--------------ATC-CCGATC------------C.........................................................................................................................................................................................................................28180.3360600000000
................................................T--------------ATC-CCGATC------------CCACCAGT--AAATAGACGT......................................................................................................................................................................................................28150.3350410000000
...TGGTGTC-------CGCACGT---TC---GCTAG..........................................................................................................................................................................................................................................................................2130.3310100000000
.....................................................................................................................................................................................................GTTTCACGGCTGGCCCCTGACCT-CACATC............................................................................29200.3060411000000
....................................................................................................................................................................................................TGTTTCACGGCTGGCCCCTG.......................................................................................20200.3060600000000
........................................................................................CCAGT--AAATAGACGTTCCGGACCT.............................................................................................................................................................................................24200.3060510000000
..........................................................................................AGT--AAATAGACGTTCCGGACCT.............................................................................................................................................................................................22200.3060600000000
...................................................................................................AGACGTTCCGGACCTCCGG---......................................................................................................................................................................................19200.3060600000000
.........................................................................................................................................................................................................CACGGCTGGCCCCTGACCT-CACATC............................................................................25200.3060600000000
............................................................................................T--AAATAGACGTTCCGGAC...............................................................................................................................................................................................18200.3060000100410
.......................................................................TC------------CCACCAGT--AAATAGACGTTCCGG.................................................................................................................................................................................................25200.3060600000000
...............................................................................................AAATAGACGTTCCGGACCTCCG..........................................................................................................................................................................................22200.3060000000600
................................................................TC-CCGATC------------CCACCAGT--AAATAGACGT......................................................................................................................................................................................................26200.2550410000000
...........................................................................................GT--AAATAGACGTTCCGGACC..............................................................................................................................................................................................20200.2550020000120
............................................................................................................................TTGCCACCACAGGTACTAGGC..............................................................................................................................................................21200.2550500000000
................................................................................................AATAGACGTTCCGGACCTCC...........................................................................................................................................................................................20200.2550400001000
..................................TAGTTGTCCCG-TCT--------------ATC-CCGA........................................................................................................................................................................................................................................21200.2550500000000
.......................................................................TC------------CCACCAGT--AAATAGACGTTCCGGAC...............................................................................................................................................................................................27200.2550500000000
........................................TCCCG-TCT--------------ATC-CCGATC------------CCACC.....................................................................................................................................................................................................................22200.2550400100000
........................................................................C------------CCACCAGT--AAATAGACGTTCCGGACC..............................................................................................................................................................................................27200.2550500000000
...........................................................................................................................................................................................CAAGTTT-TTGTTTCACGGCTG..............................................................................................21200.2550500000000
...................................................................................................................................................................................................................................................................TAAAAGCCGTG---GGTTTAAAGGTA..................23200.2550500000000
............................................................................................................................TTGCCACCACAGGTACTAGGCC.............................................................................................................................................................22200.2550500000000
....................................................................................................................................................................................................................................................TTATTCAAAGCAAAATAAAAGC.....................................22200.2550500000000
........................................................................................................TTCCGGACCTCCGG---ATATTGCCACC...........................................................................................................................................................................25200.2040400000000
................................................................................................AATAGACGTTCCGGACCTCCG..........................................................................................................................................................................................21200.2040200000200
.................................................................................................ATAGACGTTCCGGACCTCC...........................................................................................................................................................................................19200.2040300000010
..................................................................................................TAGACGTTCCGGACCTCCGG---A.....................................................................................................................................................................................21200.2040400000000
.....................................................................................................................................................................................AAC-GACAAGTTT-TTGTTTCACGGCTG..............................................................................................26200.2040400000000
....................................................................................................................................................................................................................................................................AAAAGCCGTG---GGTTTAAAGGT...................21200.2040400000000
.....................................................................................................................................................................................................GTTTCACGGCTGGCCCCTG.......................................................................................19200.2040400000000
.......................................................................................ACCAGT--AAATAGACGTTCCGG.................................................................................................................................................................................................21200.2040300000010
...........................TC---GCTAGTTGTCCCG-TCT--------------ATC-CCGAT.......................................................................................................................................................................................................................................26200.2040310000000
............................................................................................T--AAATAGACGTTCCGGACCTG............................................................................................................................................................................................21200.2040400000000
..................................................................................................TAGACGTTCCGGACCTCCGG---ATAT..................................................................................................................................................................................24200.2040400000000
............................C---GCTAGTTGTCCCG-TCT--------------ATC-CCGA........................................................................................................................................................................................................................................24200.2040400000000
...........................................................................................................................................................TAAACCACTGGTGGGAGTCCC...............................................................................................................................21200.2040400000000
...............................................................................................................................................................................................TTT-TTGTTTCACGGCTGGCCC..........................................................................................21200.2040400000000
...............................................................................................AAATAGACGTTCCGGACC..............................................................................................................................................................................................18200.2040400000000
.....................................................................................................................................................................................AAC-GACAAGTTT-TTGTTTCACG..................................................................................................22200.2040000000400
......................................................................................................................................................................................................TTTCACGGCTGGCCCCTGACCT-CAC...............................................................................25200.2040400000000
............................................................................................................................TTGCCACCACAGGTACTAGG...............................................................................................................................................................20200.2040400000000
...................................AGTTGTCCCG-TCT--------------ATC-CCGATC------------..........................................................................................................................................................................................................................22200.2040400000000
............................................................................................T--AAATAGACGTTCCGGACCTCCGT---T.....................................................................................................................................................................................25200.2040400000000
........................................TCCCG-TCT--------------ATC-CCGATC------------CCAC......................................................................................................................................................................................................................21200.2040400000000
......................................................................................CACCAGT--AAATAGACGTTCCG..................................................................................................................................................................................................21200.2040400000000
...........................TC---GCTAGTTGTCCCG-TCT--------------ATA-GA..........................................................................................................................................................................................................................................23200.2040100000030
................................................T--------------ATC-CCGATC------------CCACCAGT--AAATAGACG.......................................................................................................................................................................................................27160.1930100000200
.......................T---TC---GCTAGTTGTCCCG-TCT--------------ATC-CCGATC------------..........................................................................................................................................................................................................................28160.1930300000000
...................................................................................................................................................................................................TTGTTTCACGGCTGGCCCCTGACC....................................................................................24200.1530210000000
..........................................................................................................................TATTGCCACCACAGGTACTAGG...............................................................................................................................................................22200.1530210000000
....................................GTTGTCCCG-TCT--------------ATC-CCGATC------------..........................................................................................................................................................................................................................21200.1530300000000
.........................................................................................................................................................................................................CACGGCTGGCCCCTGACCT-CAC...............................................................................22200.1530300000000
......................................................................................................................................................................................AC-GACAAGTTT-TTGTTTCACGGC................................................................................................23200.1530000000300
............................................................................................T--AAATAGACGTTCCGGAA...............................................................................................................................................................................................18200.1530300000000
............................................................................................T--AAATAGACGTTCCGGACCTCCGG---ATAA..................................................................................................................................................................................28200.1530010000200
.....................................TTGTCCCG-TCT--------------ATC-CCGATC------------..........................................................................................................................................................................................................................20200.1530200100000
..................................................................................................TAGACGTTCCGGACCTCCGG---AT....................................................................................................................................................................................22200.1530300000000
......................................................................................................................................................................................................TTTCACGGCTGGCCCCTGA......................................................................................19200.1530300000000
......................................................................................................................................................................................AC-GACAAGTTT-TTGTTTCACG..................................................................................................21200.1530300000000
........................................................................................CCAGT--AAATAGACGTTCCG..................................................................................................................................................................................................19200.1530200000010
...................................................................................................................................................................................................TTGTTTCACGGCTGGCCCCTGAC.....................................................................................23200.1530300000000
........................................................................................CCAGT--AAATAGACGTTCCGG.................................................................................................................................................................................................20200.1530300000000
...........................................................................................................................................................TAAACCACTGGTGGGAGTCC................................................................................................................................20200.1530300000000
...............................................................................................AAATAGACGTTCCGGACCTCCGG---AT....................................................................................................................................................................................25200.1530300000000
.....................................................................................CCACCAGT--AAATAGACGTTCCGGA................................................................................................................................................................................................24200.1530300000000
..................................TAGTTGTCCCG-TCT--------------ATC-CCGATC------------CCA.......................................................................................................................................................................................................................26200.1530300000000
.............................................................................................................................TGCCACCACAGGTACTAGGCCTG...........................................................................................................................................................23200.1530300000000
.................................................................................................................TCCGG---ATATTGCCACCACAGGTAC...................................................................................................................................................................24200.1531010000010
.....................................................................................................................................................................................................GTTTCACGGCTGGCCCCTGAA.....................................................................................21200.1530300000000
......................................................................................................................................................................................AC-GACAAGTTT-TTGTTTCACGG.................................................................................................22200.1530000000300
...........................................................................................................................................................TAAACCACTGGTGGGAGTCCCACCAAA.........................................................................................................................27200.1530300000000
.....................................................................................................................................................................................................GTTTCACGGCTGGCCCCTGACCT-CACA..............................................................................27200.1530300000000
.........................................................................................CAGT--AAATAGACGTTCCGGACCTCCGG---......................................................................................................................................................................................27200.1530200000100
................................................................................................AATAGACGTTCCGGACCTCCGG---......................................................................................................................................................................................22200.1530300000000
.................................................................................................................................................................................................T-TTGTTTCACGGCTGGCCCC.........................................................................................20200.1530100011000
............................................................................................T--AAATAGACGTTCCGGACCTCCGG---T.....................................................................................................................................................................................25200.1530000000300
.......................................................................................................................................................................................C-GACAAGTTT-TTGTTTCACGGCTGGC............................................................................................26200.1530300000000
.......................................................................TC------------CCACCAGT--AAATAGACGTTCCGGA................................................................................................................................................................................................26200.1530300000000
...........................................................................................GT--AAATAGACGTTCCGGACCTCC...........................................................................................................................................................................................23200.1530100000200
............................................................................................................................................................................................................................................................AGCAAAATAAAAGCCGTG---GG............................20200.1530200000010
..........................................................................................AGT--AAATAGACGTTCCGGACCTC............................................................................................................................................................................................23200.1020100000100
..........................................................................................................................TATTGCCACCACAGGTACTAGGCCTGTC.........................................................................................................................................................28200.1020000000020
.................................................................................................ATAGACGTTCCGGACCTCCGG---......................................................................................................................................................................................21200.1020000000020
.........................................................................................................TCCGGACCTCCGG---ATATTGCCACC...........................................................................................................................................................................24200.1020200000000
......................................................................................................................................................................TGGGAGTCCCACCAAAAC-GACAAG................................................................................................................24200.1020200000000
......................................................................................................................................................................................................TTTCACGGCTGGCCCCTGACCT-CACAT.............................................................................27200.1020200000000
.................................................................................................................TCCGG---ATATTGCCACCACAGGTACTA.................................................................................................................................................................26200.1020200000000
.............................................................................................................................TGCCACCACAGGTACTAGGCCTGTGG........................................................................................................................................................26200.1020200000000
......................................TGTCCCG-TCT--------------ATC-CCGAT.......................................................................................................................................................................................................................................18200.1020200000000
....................................................................................................................................................................................................TGTTTCACGGCTGGCCCCTGAA.....................................................................................22200.1020200000000
..........................................................................................................................................................................................................ACGGCTGGCCCCTGACCT-CAC...............................................................................21200.1020200000000
..............................................................................................................ACCTCCGG---ATATTGCCACCACAG.......................................................................................................................................................................23200.1020200000000
.....................................................................................................................................................................................................GTTTCACGGCTGGCCCCTGACCT-CAC...............................................................................26200.1020020000000
.................................................................................................ATAGACGTTCCGGACCTC............................................................................................................................................................................................18200.1020200000000
............................................................................................................................................................................................................................................................AGCAAAATAAAAGCCGTG---GGTT..........................22200.1020200000000
........................................................................................................................................................................................................TCACGGCTGGCCCCTGACCT-CACATCT...........................................................................27200.1020200000000
...........................................................................................................................................................................................CAAGTTT-TTGTTTCACGGCTGGCCC..........................................................................................25200.1020020000000
..........................................................................................................................TATTGCCACCACAGGTACTAG................................................................................................................................................................21200.1020100000100
......................................................................................................................................................................................................TTTCACGGCTGGCCCCTGACCT-CA................................................................................24200.1020200000000
.......................................GTCCCG-TCT--------------ATC-CCGATC------------CCAC......................................................................................................................................................................................................................22200.1020200000000
....................................................................................................................................................................................AAAC-GACAAGTTT-TTGTTTCACGGC................................................................................................25200.1020200000000
...............................................................................................AAATAGACGTTCCGGACCTCCGG---ATAT..................................................................................................................................................................................27200.1020200000000
..................................TAGTTGTCCCG-TCT--------------ATC-CCGATC------------CCACC.....................................................................................................................................................................................................................28200.1020200000000
.......................................GTCCCG-TCT--------------ATC-CCGATC------------CC........................................................................................................................................................................................................................20200.1020200000000
................................GCTAGTTGTCCCG-TCT--------------ATC-CCGATC------------..........................................................................................................................................................................................................................25200.1020200000000
..................................TAGTTGTCCCG-TCT--------------ATC-CCGATC------------CCAC......................................................................................................................................................................................................................27200.1020200000000
......................................................................................CACCAGT--AAATAGACGTTCCGGACCT.............................................................................................................................................................................................26200.1020200000000
..................................TAGTTGTCCCG-TCT--------------ATC-CCG.........................................................................................................................................................................................................................................20200.1020200000000
.................................CTAGTTGTCCCG-TCT--------------ATC-CCGA........................................................................................................................................................................................................................................22200.1020200000000
...................................AGTTGTCCCG-TCT--------------ATC-CCGAT.......................................................................................................................................................................................................................................21200.1020200000000
........................................................................................................TTCCGGACCTCCGG---ATATTGCCACCAC.........................................................................................................................................................................27200.1020200000000
...................................AGTTGTCCCG-TCT--------------ATC-CCGATC------------C.........................................................................................................................................................................................................................23200.1020200000000
.....................................................................................................................................................................................AAC-GACAAGTTT-TTGTTTCACGGCTGG.............................................................................................27200.1020000000020
...........................TC---GCTAGTTGTCCCG-TCT--------------ATC-CCGATT------------..........................................................................................................................................................................................................................27200.1020200000000
..........................................................................................................................................................................................................ACGGCTGGCCCCTGACCT-CACA..............................................................................22200.1020200000000
.......................................................................................................................................................................................................TTCACGGCTGGCCCCTGAC.....................................................................................19200.1020020000000
...........................................................................................................................ATTGCCACCACAGGTACTAGGCCT............................................................................................................................................................24200.1020200000000
...........................TC---GCTAGTTGTCCCG-TCT--------------AT..............................................................................................................................................................................................................................................20200.1020200000000
........................................................................................CCAGT--AAATAGACGTTCCGGACC..............................................................................................................................................................................................23200.1020011000000
.......................................GTCCCG-TCT--------------ATC-CCGATC------------CCACC.....................................................................................................................................................................................................................23200.1020200000000
.................................................................................................................................................................................................................................................................AATAAAAGCCGTG---GGTTTAAA......................21200.1020000002000
.....................................TTGTCCCG-TCT--------------ATC-CCGATC------------CC........................................................................................................................................................................................................................22200.1020200000000
.......................................................................................ACCAGT--AAATAGACGTTCCGGAC...............................................................................................................................................................................................23200.1020100000100
......................................................................................................................................................................................................TTTCACGGCTGGCCCCTGACCT-CACA..............................................................................26200.1020200000000
....................................................................................................................................................................................................................................................TTATTCAAAGCAAAATAAAAGCCG...................................24200.1020000000200
..................................................................................................................................................................................................................................................................ATAAAAGCCGTG---GGTTTAAAGGTG..................24200.1020200000000
.....................................................................................................................................................................................................GTTTCACGGCTGGCCCCTGACCT-C.................................................................................24200.1020010001000
...................................................................CCGATC------------CCACCAGT--AAATAGACGTTC....................................................................................................................................................................................................26200.1020200000000
............................................................................................................................................................................TCCCACCAAAAC-GACAAGTTT-TTGT........................................................................................................25200.1020200000000
........................................TCCCG-TCT--------------ATC-CCGATC------------CCACCA....................................................................................................................................................................................................................23200.1020200000000
..................................................................................................TAGACGTTCCGGACCTCCG..........................................................................................................................................................................................19200.1020200000000
...................................................................................................................................................................................................................................................TTTATTCAAAGCAAAATAAAAGCCG...................................25200.1020200000000
................................................................................................AATAGACGTTCCGGACCTCCGG---ATA...................................................................................................................................................................................25200.1020200000000
.........................................................................................................................................................................................................CACGGCTGGCCCCTGACCT-..................................................................................19200.1020200000000
...........................................CG-TCT--------------ATC-CCGATC------------CCACCAG...................................................................................................................................................................................................................21200.1020200000000
....................................................................................................................................ACAGGTACTAGGCCTGTGGTT......................................................................................................................................................21200.1020200000000
...........................TC---GCTAGTTGTCCCG-TCT--------------ATC-............................................................................................................................................................................................................................................21200.1020000002000
...........................................................................................GT--AAATAGACGTTCCGGACCT.............................................................................................................................................................................................21200.1020200000000
.............................................................................................................................................................................................AGTTT-TTGTTTCACGGCTGG.............................................................................................20200.1020100010000
...........................................................................................GT--AAATAGACGTTCCGGACCTC............................................................................................................................................................................................22200.1020110000000
............................C---GCTAGTTGTCCCG-TCT--------------ATC-CCGATC------------..........................................................................................................................................................................................................................26200.1020200000000
................................................................TC-CCGATC------------CCACCAGT--AAATAGACG.......................................................................................................................................................................................................25200.1020200000000
....................................................................................................................................................................................................................................................................AAAAGCCGTG---GGTTTAAAGG....................20200.1020200000000
.......................................GTCCCG-TCT--------------ATC-CCGATC------------CCACCA....................................................................................................................................................................................................................24200.1020200000000
...................................................................................................................................................................................................TTGTTTCACGGCTGGCCCCTGA......................................................................................22200.1020200000000
...........................................................................................................................ATTGCCACCACAGGTACTAGG...............................................................................................................................................................21200.1020200000000
...........................TC---GCTAGTTGTCCCG-TCT--------------ATC-CCGATA------------..........................................................................................................................................................................................................................27200.1020200000000
...........................................................................................................................................................................................CAAGTTT-TTGTTTCACGGCTGGC............................................................................................23200.1020200000000
...........................................................................................GT--AAATAGACGTTCCGGACCTCCGG---......................................................................................................................................................................................25200.1020200000000
..........................................................................................................................TATTGCCACCACAGGTACTAGGC..............................................................................................................................................................23200.1020020000000
.......................T---TC---GCTAGTTGTCCCG-TCT--------------ATC-CCGAT.......................................................................................................................................................................................................................................27160.0610100000000
....................................................................................................................................ACAGGTACTAGGCCTGTGGT.......................................................................................................................................................20200.0510100000000
.....................................................................................................................................CAGGTACTAGGCCTGTGGTG......................................................................................................................................................20200.0510100000000
...................................................................................................AGACGTTCCGGACCTCCGG---ATA...................................................................................................................................................................................22200.0510100000000
.....................................TTGTCCCG-TCT--------------ATC-CCGATC------------CCACCA....................................................................................................................................................................................................................26200.0510100000000
........................................................................................................................................................................................................................................................TCAAAGCAAAATAAAAGCCGTG---G.............................23200.0510100000000
droWil2
CCGATAGTTC-------TAAAAGTATTGAGGGCCCCGTA---------------AAC-----AAGT-TGACTG------------CTGCAGTG--GG-TGACTTGTCCAACGTTACTGCTGCGGCTGACGC---------------TTCGGGACCGCGGCCTCTCATTGGCATACCACCAAAGA-AACATATAT-TTGTTTCTAGGCTAGACCCTGTTGT-CACATCTGATGATGTAATAGCCTATATTCGGAAGAAAGTTAACGTCTCG---AATATTGCGGTGG-----------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................................................................................................AACGTTACTGCTGCGGCTGACG.............................................................................................................................................................................22200.40808000
...................................................................................................................................................................................................................................................TATATTCGGAAGAAAGTTAACGTCT...................................25200.30620040
....................................................................................................................................................................................................................CCTGTTGT-CACATCTGATGATGTAA.................................................................25200.30606000
................................................................................................................................CGC---------------TTCGGGACCGCGGCCTCTCAT........................................................................................................................................2450.20101000
..................................................................................................................................................TTCGGGACCGCGGCCTCTCATTGGCATA.................................................................................................................................2850.20101000
................................................................................................................................CGC---------------TTCGGGACCGCGGCCTCTCA.........................................................................................................................................2350.20101000
................................................................................................................................CGC---------------TTCGGGACCGCGGCCTCTCATTG......................................................................................................................................2650.20101000
...........................................................................................................................................................................................................................T-CACATCTGATGATGTAATAGCCT...........................................................24200.20404000
..................................................................................................................................................TTCGGGACCGCGGCCTCTCATTGG.....................................................................................................................................2450.20101000
..............................................................AAGT-TGACTG------------CTGCAGTG--GG-T............................................................................................................................................................................................................21200.15300300
.................................CCCGTA---------------AAC-----AAGT-TGACTG------------CTG.......................................................................................................................................................................................................................22200.10202000
.....AGTTC-------TAAAAGTATTGAGGGCCCCG..........................................................................................................................................................................................................................................................................25200.10202000
....TAGTTC-------TAAAAGTATTGAGGGCCC............................................................................................................................................................................................................................................................................24200.10202000
....................................GTA---------------AAC-----AAGT-TGACTG------------CTGC......................................................................................................................................................................................................................20200.10202000
...........................................................................................................................................................................................................................................TAATAGCCTATATTCGGAAGA...............................................21200.05100001
.............................................................................................................................................................................................TATAT-TTGTTTCTAGGCT...............................................................................................18200.05110000
.............................................................................................................................................................................................................................................ATAGCCTATATTCGGAAGAAAGT...........................................23200.05100100
......................................................................................................................................................................................................................................................................ACGTCTCG---AATATTGCGGTGG-----------------21200.05100001
........................................................................................................................................................................................................................................ATGTAATAGCCTATATTCGGAAGA...............................................24200.05100100
................................................................................................................................................................................................................AGACCCTGTTGT-CACATCTGATGATG....................................................................26200.05101000
...............................................................................................................................ACGC---------------TTCGGGACCGCGGCC..............................................................................................................................................19200.05100010
......................................................................................................TTGTCCAACGTTACTGCTGCG....................................................................................................................................................................................21200.05100001
..............................................................AAGT-TGACTG------------CTGCAGTG--G...............................................................................................................................................................................................................19200.05101000
.......................................................................................................................................................................................................................................................TTCGGAAGAAAGTTAACGTCTC..................................22200.05101000
.............................................................................................................................TGACGC---------------TTCGGGACCGCGGC...............................................................................................................................................20200.05101000
..GATAGTTC-------TAAAAGTATTGAGGGC..............................................................................................................................................................................................................................................................................24200.05101000
......................................................................................................................................................................................................................................TGATGTAATAGCCTATATTCGGAAG................................................25200.05100010
.......TTC-------TAAAAGTATTGAGGGCCCCGTA---------------.........................................................................................................................................................................................................................................................25200.05101000
.........................TTGAGGGCCCCGTA---------------AAC-----AAGT-TGACTG------------C.........................................................................................................................................................................................................................28200.05101000
.....AGTTC-------TAAAAGTATTGAGGGC..............................................................................................................................................................................................................................................................................21200.05110000
....TAGTTC-------TAAAAGTATTGAGGGCC.............................................................................................................................................................................................................................................................................23200.05101000
.......................................................................TG------------CTGCAGTG--GG-TGACTTGTC....................................................................................................................................................................................................21200.05101000
.....AGTTC-------TAAAAGTATTGAGGGCCCCA..........................................................................................................................................................................................................................................................................25200.05100010
..........................TGAGGGCCCCGTA---------------AAC-----AAGT-TGACTG------------C.........................................................................................................................................................................................................................27200.05101000
droVir3
CGTAGATGTTC------CGAAAGCGCAACGCCAACAGTTA---AA-TTT--------------A---CAACAG------------TCGCTAGA--AGGTACGTCGTCCAAGCCACCGGCTGTTATAGGTACCACTGAT-----ACCTGTGGCGCCTAAGCCTCAAGTGGGTGTTCAACCAAAGA-GACACATAT-TTGTTTCAAGGCTTGCACCTCATTTCCTCATCAGAAGAGGGTAAAGCCTTCGTACAGGCAAAAATTCAAGCCACA---GGTATAACGGTG------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................................TT--------------A---CAACAG------------TCGCTAGA--AGGTACGTCG......................................................................................................................................................................................................2720.501000000000000000000000000000000000010000000000000000000000000000
...................................................................CAACAG------------TCGCTAGA--AGGTACG.........................................................................................................................................................................................................2140.251001000000000000000000000000000000000000000000000000000000000000
droAna3
TTGTGG-------------------TATCGCTTCAAGTGATCCCA----GACCCAAT-----AATT-CAAACC------------CCAAACAGGACAATAAACCGTCCGGACCCCCGGTACGTACTGATGCCGCAGTATTAGTTCCGGCGGCACCAAAACCCTTGCAGGTGATCCCACCATCGA-AACACATTT-TTGTTTCCCGGCTTGCCCCTGATAC-TTCGGAGATTGATATCTCGGCTTACATAAAAGCCAAAACAAAAGTCGA------CATAAAGGTGG-----------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................................................................................................................................................AACCCTTGCAGGTGATCCCACCATCGA-A.....................................................................................................................28200.204400000
........................................................................................................................................................................................................................ATAC-TTCGGAGATTGATATCTCGGCT............................................................26200.153030000
................................................................................................................................................................................................................TGCCCCTGATAC-TTCGGAGATTGATATC..................................................................28200.102200000
................................................................................................................................................................................................................TGCCCCTGATAC-TTCGGAGATTGATA....................................................................26200.051100000
.......................................................................................................................................................................................................TTCCCGGCTTGCCCCTGATAC-T.................................................................................22200.051100000
.........................................................................................................................................................................................................CCCGGCTTGCCCCTGATAC-TTCGG.............................................................................24200.051100000
...........................................CA----GACCCAAT-----AATT-CAAACC------------..........................................................................................................................................................................................................................20200.051010000
................................TCAAGTGATCCCA----GACCCAAT-----AA...............................................................................................................................................................................................................................................23200.051010000
........................................................................................................................................................................................................................................................AAAAGCCAAAACAAAAGA.....................................18200.051010000
...................................................................................................................................................................................ATCGA-AACACATTT-TTGTTTCCCGGCTT..............................................................................................28200.051100000
.................................................................................................................................................................................................................GCCCCTGATAC-TTCGGAGATTGATATCT.................................................................28200.051010000
droBip1
AAGTGATGCCACAGGTCCCTA-----------GGGAACGAAAC--------CCCCAT-----TAAA-ATCACC------------CAAAATGG--TATTCCACAGTCCGGACCACCGGCACTTACTGATGCTGCAGTTCTCGTACCTGCGACACCAAAACCCTTACAGGTGATTCCTCCATCGA-AACATATAT-TTGTTTCTCGGCTTGCCCCTGATAC-TTCAGAGATTGATATCTCGGCTTATATCAAAGCCAAAACAAAAGCCGA------TATAAAGGTGG-----------------SizeHit CountTotal NormTotal
No Reads
droKik1
CCGTTTTGTC-------CCCAAGTGC----C-AACAGTTGTCTTCGTAG--------------AGC-CCCATT----CCAGTTCCCTGCC--A--GGGTGTCAGGCCCGGACTACCGGCCGAAATTGGTATTGCGAATAATCAGCCTGCCTTTCCAAAACTCCTTATGGCAATACCACCAACGA-GACAGTTAG-TTGTTTCGCTGCTTTCCCCTGATCA-AACATCGGAAGATGTTATAGCTTTTATCCTAAGCACAACAAAAGCCG-----------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CCGATTTGTC-------CGAAGGTGGTTCTCAAAATGTAATTCCA-CCTAACCAACC-----AAAT-ATACCC------------CCACAAGA--GGCTTCTGAGACCGGACTACCGGCCCAAATTGCCACCGCAGGCCCACTGCCTGCAGTAGCAAAACCCCTCACAGTGGTTCCACAAATGA-GACAAATAT-TTGTTTCTCGGCTGGCCCCTGATCT-CACATCATTTGATGTCACGTCTTACATTAAAGACAAAATTAATGCCGAT---AAAGTAAAGGTGG-----------------SizeHit CountTotal NormTotal
No Reads
droEle1
C-------------------------------------------------------------------------------------CACAAGA--GAATATTGAGTCCGGACTACCGGCCCAGGTTGGTTCTGCAAAAACTCAGTCTGCACTTCCAAAACCCCTTTCTGTGGTGCCACTGAAGA-AACAAACAT-TTGTTTCCTGGCTTTCCCCTACTCA-AATATCTATTGATGTGTTGTCTTATATTCAAAGC------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CCGTAGTG----------------GTTTCACAATTAGTGGATCCA-CCTATCTCTCAGAATGTAGTATCACCA------------CCACAAGG--GACTACTGAGTCCGGACAACCGGCTCAAGTTGGTTCTGCAGAAACAATGTCTGCTCCACCAAAATCCCTTTTAGTGGTTCCACTAAAGA-AACAAATTT-TCGTTTCTCGGCTTTCCCCTGATCA-AACATCTTCTGATGTATTGTCTTATATACAAGACAAAACTAAAGCCGATTGTAGTGTAAAGGTGG-----------------SizeHit CountTotal NormTotal
No Reads
droTak1
CCGTAGTA----------------GACCC---CCCTGTTGTTCCG-CCCATTTCTAA-----TAAC-TTGTCA------------CCTCCAGG--GAATGTTGAGTCCGGTCTACCGGCACAAGTTGGCGCTGCAGAAACTCAATCTGCAGTACCAA-ACCTCTTTCAGTGGTTCAACCCAAAA-AACAAATAT-TTATTTCTCG-TTTTCGCCTGACCA-AACGGCATCCGAGGTATTGGCCTATATACAGCACAAAACAAATGCCAAA---AACATTAAAGTGG-----------------SizeHit CountTotal NormTotal
No Reads
droEug1
TCCTGGCTCC-------TACA-------------GAGC---------CAATCTCCAT-----TAAC-ATCAACCCACCCGATACACTGCAGGG--GAATTTCGTGCCCGGCCTACCGGCGTGCACTGGCGGTGCAGGACTAGAACCTGCTACACCAAAGCCCCTAAAGGTAATCCCATCTGAGA-AACATATAT-TTGTTTCCCGGCTTTCCGAGGATAC-GTCTGAGTCAGACGTATTGGCATACATGCAAGCCAGAACGAAAGCCGA------CATTAAGGTGG-----------------SizeHit CountTotal NormTotal
No Reads
dm3
CTGCACTG----------------GTTTCTCAACCAGTGATTCCA-TC------GAT-----TAGT-TTACCA------------CCACAAGG--GAACATTGAGACCGGACTACCGGCACAAATTGGCAC-----AAATACAATCTGCAGGGCCAAAGCCCCT-GCGGTGGTTCCACTAAAGA-AACAAATTT-TCGTTTCTCGGCTTTACCCTGATCA-AACATCGTCTGATGTATTGTCTTATATACAAGACAAAACAAAAGCCGAT---AATATAAAAGTGG-----------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
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Embryo		V083
Male-body		V084
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CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
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fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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.....................................................................ACCA------------CCACAAGG--GAACATTGAGACCGG.................................................................................................................................................................................................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................................AC-----AAATACAATCTGCAGGGCCAAAGC...............................................................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................TCTCGGCTTTACCCTGATCA-AACATCG...........................................................................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................CAAGG--GAACATTGAGACCGGACTACCGG.........................................................................................................................................................................................2820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................ATTT-TCGTTTCTCGGCTTTACC..........................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................................................................CGTTTCTCGGCTTTACCCTGT......................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........................................................................................AGG--GAACATTGAGACCGGACT..............................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
................................................................................................................TACCGGCACAAATTGGCAC-----AAATACAA...............................................................................................................................................................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................CAAATTGGCAC-----AAATACAATCTGCAGG.......................................................................................................................................................2720.5010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................CAAATTT-TCGTTTCTCGGCTTTA............................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
................................................................................................................................................................................................................TTACCCTGATCA-AACATCGTC.........................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................AC-----AAATACAATCTGCAGGGCCA...................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................CAGGGCCAAAGCCCCT-GCGGTGGTTC................................................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................TT-TCGTTTCTCGGCTTTA............................................................................................1820.5010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................TACCCTGATCA-AACATCGTCT........................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.......................................................................CA------------CCACAAGG--GAACATTGAGAC....................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................AAGG--GAACATTGAGACCGGACTACCGGCA.......................................................................................................................................................................................2920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................CTTTACCCTGATCA-AACATCG...........................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................TTGGCAC-----AAATACAATCTGCAGGGC.....................................................................................................................................................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................TTCTCGGCTTTACCCTGATCA-AACATCG...........................................................................2820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................AGG--GAACATTGAGACCGGACTACC...........................................................................................................................................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................AACATTGAGACCGGACTACCGGC........................................................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................ATTGAGACCGGACTACCGGCACAA....................................................................................................................................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................CCTGATCA-AACATCGTCTGATG....................................................................22200.50100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000001100000000000002000000000000010000000
.................................................................................................................................................................................................................TACCCTGATCA-AACATCGTCTG.......................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
....................................................................................................TTGAGACCGGACTACCGGCAC......................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................T-TTACCA------------CCACAAGG--GAACATTGAGAC....................................................................................................................................................................................................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................TCTCGGCTTTACCCTGATCA-..................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................CA------------CCACAAGG--GAACATTGAGACCGGAT...............................................................................................................................................................................................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................ACAAGG--GAACATTGAGACCGGA................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................AATTT-TCGTTTCTCGGCTTTACCCTGA......................................................................................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................CCAAAGCCCCT-GCGGTGGTTC................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................CAAGG--GAACATTGAGACC...................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................CAC-----AAATACAATCTGCAGGGC.....................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
.........................................................................................AAGG--GAACATTGAGACCGGACTACC...........................................................................................................................................................................................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................T-TCGTTTCTCGGCTTTACCCTG.......................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............................CAACCAGTGATTCCA-TC------GAT-----TAGT-T...........................................................................................................................................................................................................................................2560.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.....................................................................ACCA------------CCACAAGG--GAACATTGAGACCGGA................................................................................................................................................................................................2820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................ACCCTGATCA-AACATCGTCTGC......................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...........................................................................................................................................................................................................CGGCTTTACCCTGATCA-AACATCGTC.........................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................GAACATTGAGACCGGACTACCGGCACA.....................................................................................................................................................................................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................CCCTGATCA-AACATCGTCTGATGTA..................................................................25200.4590000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000210011020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................GCCGAT---AATATAAAAGTGG-----------------19200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000010000000000000000001500001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................T-----TAGT-TTACCA------------CCACAAGG--GAA.............................................................................................................................................................................................................22200.4590000000000000000000000000000000000000000010000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000002000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100000000
.................................................................................................................................................................................CTAAAGA-AACAAATTT-TCGTT.......................................................................................................21200.4590000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000000000000010000000100000000000000000000000000000000000000000000000100001010
..............................................................................................................................................................................CCACTAAAGA-AACAAATTT-TCGTT.......................................................................................................24200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000062000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TTTCTCAACCAGTGATTCCA-T................................................................................................................................................................................................................................................................2170.4330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000001010
...............................................................................................................................................................................CACTAAAGA-AACAAATTT-TCGT........................................................................................................22200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000010000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................TAGT-TTACCA------------CCACAAGG--GAA.............................................................................................................................................................................................................21200.4080000000000000000000000000000000000000000000000000100000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000101000
......................................................................................................................................................................................................................TGATCA-AACATCGTCTGATGT...................................................................21200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000001000000000000000000000100000000000000000000000000000000000000000000000000000000000000100000000000002000
...................................................................................................................................................................................................................CCCTGATCA-AACATCGTCTGATG....................................................................23200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000100001000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000
...................................................................................................................................................................................................................................................TATATACAAGACAAAACAAAAGCCGA..................................26200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000040100000000000000000000000000000000000000000000000000000000000000000000010000000100000000000000000000000000
droSim2
CCGAATTGTC-------CGCATTGGTTTCTCAACCAGTGATTCCA-CCTGTCTCGAT-----TAGT-TTACCA------------CCACAAGG--GAACATTGAGTCCGGACTACCGGCACAAGTTGGCGCTTCAGAAATACAATCTGCAGCGCCAAAACCCCTCGCGGTGGTTCCACTAAAGA-AACAAATTT-TTGTTTCTCGGCTTGCCCCTGATCA-AACATCGTCGGATGTATTGTCTTATATACAAGACAAAACAAAAGCCGAT---AATATAAAAGTGG-----------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................TCGAT-----TAGT-TTACCA------------CCACAAGG--GA..............................................................................................................................................................................................................252096.8519370000003771265952000000000
.................................................................................................................................................................................................................GCCCCTGATCA-AACATCGTCGGAT.....................................................................24266.0013200001104755766000000
.................................................................................................................................................................................................................GCCCCTGATCA-AACATCGTCGGATGT...................................................................26164.0064004100493601000000
.........................................................................................................TCCGGACTACCGGCACAAGTTGGCGCT...........................................................................................................................................................................271453.867540033210093105696050818000
.................................................................................................................................................................................................................GCCCCTGATCA-AACATCGTCGGATGTAT.................................................................28146.0046000000402400000000
............................................................................................................................................ACAATCTGCAGCGCCAAAACCCCTC..........................................................................................................................................251039.30393000140000007030864000
.........................................................................................................TCCGGACTACCGGCACAAGTTGGCGC............................................................................................................................................................................261438.865440031140028714034339716000
............................................................................................................................................ACAATCTGCAGCGCCAAAACCCCT...........................................................................................................................................241033.20332003200000080215104000
.................................................................................................................................................................................................................GCCCCTGATCA-AACATCGTCGGA......................................................................23233.00660000004051910010000
..................................................................................................................................................................................................................CCCCTGATCA-AACATCGTCGGATGTAT.................................................................271529.33440004400143511560010000
...........................................................................................................CGGACTACCGGCACAAGTTGGCGCTTC.........................................................................................................................................................................271426.2136700500090718032215000
..................................................................................................................................................................................................................CCCCTGATCA-AACATCGTCGGATGT...................................................................251625.8841404176700211031199200000
...........................................................................................................CGGACTACCGGCACAAGTTGGCGCT...........................................................................................................................................................................251425.21353002010039216085017614000
...........................................................................................................CGGACTACCGGCACAAGTTGGCGCTT..........................................................................................................................................................................261424.5034300120030708029923000
............................................................................................................................................ACAATCTGCAGCGCCAAAACCCCTCG.........................................................................................................................................26916.1114500020000000011033000
............................................................................................................................................ACAATCTGCAGCGCCAAAACCCC............................................................................................................................................231012.901290000000000107850000
.........................................................................................................TCCGGACTACCGGCACAAGTTGGCG.............................................................................................................................................................................251412.791790052002221611499000
................................................................................................................................................................................................................TGCCCCTGATCA-AACATCGTCGGATGTAT.................................................................29112.001200010021520010000
.................................................................................................................................................................................................................GCCCCTGATCA-AACATCGTCGGATG....................................................................25212.0024002000140701000000
................................................................................................................................................................................................................TGCCCCTGATCA-AACATCGTCGGATGTA..................................................................2819.00900210000400020000
................................................................................................................................................................................................................TGCCCCTGATCA-AACATCGTCGGATGT...................................................................2718.00800000040400000000
..................................................................................................................................................................................................................CCCCTGATCA-AACATCGTCG........................................................................20197.581440000144000000000000
....................................................TCGAT-----TAGT-TTACCA------------CCACAAGG--GAA.............................................................................................................................................................................................................26207.5015000000038919120000000
.................................................................................................................................................................................................................GCCCCTGATCA-AACATCGTCGGATGTA..................................................................2717.00700300030000010000
..............................................................TAGT-TTACCA------------CCACAAGG--G...............................................................................................................................................................................................................19206.601320000132000000000000
............................................................................................................................................ACAATCTGCAGCGCCAAAACCCCTCGC........................................................................................................................................2796.445800023000000101015000
..................................................................................................................................................................................................................CCCCTGATCA-AACATCGTCGGAT.....................................................................23186.33114000400090991010000
...................................................................................................................................TTCAGAAATACAATCTGCA.........................................................................................................................................................19206.201240000626200000000000
............................................................................................................................................ACAATCTGCAGCGCCAAAACCC.............................................................................................................................................22106.10610000000000202039000
.................................................................................................................................................................................................................GCCCCTGATCA-AACATCGTCGGATGTATT................................................................2916.00600000060000000000
...........................................................................................................CGGACTACCGGCACAAGTTGGCG.............................................................................................................................................................................23145.93830060006110121515000
.........................................................................................................TCCGGACTACCGGCACAAGTTGGCGCTT..........................................................................................................................................................................28145.9383005300311040660000
.................................................................................................................................................................................................................GCCCCTGATCA-AACATCGTC.........................................................................2025.5011000011000000000000
.................................................................................................................................................................................................................GCCCCTGATCA-AACATCGTCGG.......................................................................2225.501100000070202000000
...........................................................................................................CGGACTACCGGCACAAGTTGGCGC............................................................................................................................................................................24145.5077000000000020714000
..................................................................................................................................................................................................................CCCCTGATCA-AACATCGTC.........................................................................19205.101020000505000002000000
..................................................................................................................................................................................................................CCCCTGATCA-AACATCGTCGGATG....................................................................24184.948900316000130334110000
..........................................................................................AGG--GAACATTGAGTCCGGACTACCGGCA.......................................................................................................................................................................................28204.6092000000321213370250000
..............................................................TAGT-TTACCA------------CCACAAGG--GAACAT..........................................................................................................................................................................................................24204.45890000630000050138000
........................................................................A------------CCACAAGG--GAACATTGAGTCCGGAC...............................................................................................................................................................................................26204.45890000057800616020000
................................................................................................................TACCGGCACAAGTTGGCGCTTCAGA......................................................................................................................................................................25134.15540001007121218040000
....................................................................................................................................TCAGAAATACAATCTGCAGCGCCA...................................................................................................................................................2484.0032000024000101060000
..............................................................TAGT-TTACCA------------CCACAAGG--GAACA...........................................................................................................................................................................................................23203.9579000163000008043000
..................................................................................................................................................................................................................CCCCTGATCA-AACATCGTCGGATGTA..................................................................26153.80570127400070018000000
..............................................................TAGT-TTACCA------------CCACAAGG--GAAC............................................................................................................................................................................................................22203.6573000063000007003000
..............................................................................................................................................................................................................CTTGCCCCTGATCA-AACATCGTCGGA......................................................................2623.50700000020500000000
...................................AGTGATTCCA-CCTGTCTCGAT-----TA...............................................................................................................................................................................................................................................23183.5063000048030912000000
................................................................................................................................................................................................................TGCCCCTGATCA-AACATCGTCGGA......................................................................2423.50700000023101000000
..............................................................TAGT-TTACCA------------CCACAAGG--................................................................................................................................................................................................................18203.3567000166000000000000
..............................................................TAGT-TTACCA------------CCACAAGG--GA..............................................................................................................................................................................................................20203.3567000066001000000000
............................................................................................................................................ACAATCTGCAGCGCCAAA.................................................................................................................................................18103.3033000033000000000000
...................................................................TTACCA------------CCACAAGG--GAACA...........................................................................................................................................................................................................19203.2565000065000000000000
.........................................................................................................................................................................................................................................................CAAGACAAAACAAAAGCCGAT---..............................21203.2565000065000000000000
....................................................................................................................................TCAGAAATACAATCTGCAGCGC.....................................................................................................................................................2283.1325000024000000100000
........................................................T-----TAGT-TTACCA------------CCACAAGG--GAACA...........................................................................................................................................................................................................24203.1062000006200000000000
................................................................................................................................................................................................................................................TCTTATATACAAGACAAAACAAA........................................23203.0561000061000000000000
...............................................................................................................................................................................................................TTGCCCCTGATCA-AACATCGTCGGATGTAT.................................................................3013.00300000030000000000
..........................................................................................................................................................................................................................CA-AACATCGTCGGATGTATTG...............................................................21152.9344000044000000000000
............................................................................................................................................ACAATCTGCAGCGCCAAAACCCCTCGT........................................................................................................................................27102.9029000000000000920000
......................................................................................................................................AGAAATACAATCTGCAGCGCCAA..................................................................................................................................................2392.8926000025000000010000
...................................................................................................................................................................................................................................................................CAAAAGCCGAT---AATATAAA......................19202.8557000057000000000000
...................................................................................................................................................................TCGCGGTGGTTCCACTAAA.........................................................................................................................19202.8056000056000000000000
.........................................................................................................TCCGGACTACCGGCACAAGTTGGCGCTA..........................................................................................................................................................................28142.7939000000000000381000
..................................................................................................................................................................................................................CCCCTGATCA-AACATCGT..........................................................................18202.6553000050001002000000
...................................................................................................................................................................................................................................................................CAAAAGCCGAT---AATATAAAAGTGG-----------------24192.6350000100807000259000
...................................................................................................................................................................TCGCGGTGGTTCCACTAAAGA-AACA..................................................................................................................25202.6052000052000000000000
..............................................................................................................................................................................................................CTTGCCCCTGATCA-AACATCGTCGG.......................................................................2522.50500000010400000000
....................................................TCGAT-----TAGT-TTACCA------------CCACAA....................................................................................................................................................................................................................21202.3547000047000000000000
............................................................................................................................................ACAATCTGCAGCGCCAAAACCCCTT..........................................................................................................................................25102.1021000000000000138000
..............................................................................................................................................................................................................CTTGCCCCTGATCA-AACATCGTCGGATGTA..................................................................3012.00200000000200000000
...............................................................................................................................................................................................................TTGCCCCTGATCA-AACATCGTCGGA......................................................................2522.00400000030100000000
......................................................................................................................................................................................................................TGATCA-AACATCGTCGGATGTATTGTC.............................................................27142.0028004000701502000000
................................................................................................................................................................................................................TGCCCCTGATCA-AACATCGTCGGATG....................................................................2622.00400000021000010000
..........................................................................................................................................................................................................TCGGCTTGCCCCTGATCA-AACATCGTC.........................................................................2722.00400000020000020000
...........................................................................................................CGGACTACCGGCACAAGTTGGCGCTA..........................................................................................................................................................................26141.7925000000000000232000
..................................................................................................................................................................................................................CCCCTGATCA-AACATCGTCGGATGG...................................................................25171.6528012700000000000000
................................................................................................................TACCGGCACAAGTTGGCGCTTCAGAA.....................................................................................................................................................................26131.622100020030532042000
........................................................................................................GTCCGGACTACCGGCACAAGTTGGCGC............................................................................................................................................................................27131.6221000200000040150000
.........................................................................................................TCCGGACTACCGGCACAAGTTGGCGCA...........................................................................................................................................................................27141.5722000000000010201000
.................................................................................................................................................................................................................GCCCCTGATCA-AACATCGTCGT.......................................................................2221.50300000000210000000
................................................................................................................................................................................................................TGCCCCTGATCA-AACATCGTCGGAT.....................................................................2521.50300000000110010000
............................................................................................................................................................................................................GGCTTGCCCCTGATCA-AACATCGTC.........................................................................2521.50300000020100000000
..........................................................................................................................................................................................................TCGGCTTGCCCCTGATCA-AACATCGT..........................................................................2621.50300000011000001000
...........................................................................................................................................................................................................CGGCTTGCCCCTGATCA-AACATCGTC.........................................................................2621.50300000000000003000
.................................................................................................................................................................................................................GCCCCTGATCA-AACATCGTCG........................................................................2121.50300000000300000000
...........................................................................................................................................TACAATCTGCAGCGCCAAAACCCCTC..........................................................................................................................................2691.441300010001012080000
....................................................................................................................................................................................................................CCTGATCA-AACATCGTCGGATGTAT.................................................................25151.4021000000131520000000
....................................................................................................................................TCAGAAATACAATCTGCAGCGCCAAA.................................................................................................................................................2681.381100000001201160000
.......................................................................................................................................................................................................................GATCA-AACATCGTCGGATGTAT.................................................................22161.3121000000000021000000
..........................................................................................................CCGGACTACCGGCACAAGTTGGCGCT...........................................................................................................................................................................26141.291800130030200072000
......................................................................................................................................................................................................................TGATCA-AACATCGTCGGATGTATTG...............................................................25151.2719000100421101000000
....................................................TCGAT-----TAGT-TTACCA------------CCACAAGG--G...............................................................................................................................................................................................................24201.2525000000913030000000
..................................................................................................................................................................................................................CCCCTGATCA-AACATCGTCGGATGTATT................................................................28151.131700300018005000000
....................................................................................................................................TCAGAAATACAATCTGCAGCGCCAA..................................................................................................................................................2581.13900000010400040000
....................................................................................................................................TCAGAAATACAATCTGCAGCGCCAAAA................................................................................................................................................2781.13900000041200020000
...........................................................................................................................................TACAATCTGCAGCGCCAAAACCCCT...........................................................................................................................................2591.111000000020200024000
......................................................................................................................................................................................................................TGATCA-AACATCGTCGGATGTATT................................................................24161.0617000000511010000000
...................................AGTGATTCCA-CCTGTCTCGAT-----T................................................................................................................................................................................................................................................22181.0619000000202110130000
..........................................................................................................................................................................................................TCGGCTTGCCCCTGATCA-AACATCGTCGG.......................................................................2921.00200000000000020000
CCGAATTGTC-------CGCATTGGTTTCTCAACCT...........................................................................................................................................................................................................................................................................2911.00100000000001000000
...............................................................................................................................................................................................................TTGCCCCTGATCA-AACATCGTCGGAT.....................................................................2621.00200000000100010000
...................................AGTGATTCCA-CCTGTCTCGAT-----.................................................................................................................................................................................................................................................21181.001800000000008082000
.....TTGTC-------CGCATTGGTTTCTCAACCAG..........................................................................................................................................................................................................................................................................2511.00100000000001000000
............................................................................................................................................ACAATCTGCAGCGCCAAAACC..............................................................................................................................................21101.001000000000000037000
................................................................................................................................................TCTGCAGCGCCAAAACCCCTCGCGGTGGT..................................................................................................................................2961.00600100030110000000
...........................................................................................................CGGACTACCGGCACAAGTTGGCGCTTCA........................................................................................................................................................................28141.0014000000001000130000
.................................................................................................................................................................................................................GCCCCTGATCA-AACATCGTCGGATGG...................................................................2611.00100100000000000000
.................................................................................................................................................................................................................GCCCCTGATCA-AACATCGTCGGT......................................................................2321.00200000010100000000
...............................................................................................................................................................................................................TTGCCCCTGATCA-AACATCGTCGGATGTA..................................................................2911.00100100000000000000
..............................................................................................................................................................................................................CTTGCCCCTGATCA-AACATCGTCGT.......................................................................2521.00200000000110000000
................................................................GT-TTACCA------------CCACAAGG--GAACATTGAG......................................................................................................................................................................................................26201.0020000100100018000000
.....................................................................ACCA------------CCACAAGG--GAACATTGAGTCCGGAC...............................................................................................................................................................................................29200.951900000062410060000
.........................................................................................................TCCGGACTACCGGCACAAGTTGGC..............................................................................................................................................................................24200.951900810050300002000
.........................................................................................................TCCGGACTACCGGCACAAGTTGGCGCTTC.........................................................................................................................................................................29140.9313001000000000120000
................................................................................................................TACCGGCACAAGTTGGCGCTTCAGAAA....................................................................................................................................................................27130.921200000000326010000
....................................................................TACCA------------CCACAAGG--GAACATTGAGTC....................................................................................................................................................................................................25200.9018000000003011112000
..................................................................................................................................................TGCAGCGCCAAAACCCCTCGCGGT.....................................................................................................................................2480.88700000031102000000
...................................................................................................................................................................................................................CCCTGATCA-AACATCGTCGGATGTAT.................................................................26150.871300010044021010000
..................................................................................................................................................TGCAGCGCCAAAACCCCTCGCGGTGG...................................................................................................................................2670.86600020010102000000
.......................................................................CA------------CCACAAGG--GAACATTGAGTCCGGAC...............................................................................................................................................................................................27200.851700000013318100000
..................................................................................................................................................................................................................CCCCTGATCA-AACATCGTCGGA......................................................................22190.841600500003008000000
.....................................TGATTCCA-CCTGTCTCGAT-----TAGT-T...........................................................................................................................................................................................................................................24180.8315000100310010000000
...................................AGTGATTCCA-CCTGTCTCGAT-----TAGT-T...........................................................................................................................................................................................................................................26170.821400210000407000000
...................................................................................................................................................................................................................CCCTGATCA-AACATCGTCGGATGT...................................................................24160.811301610002102000000
................................................TGTCTCGAT-----TAGT-TTACCA------------CCACAAGG--GA..............................................................................................................................................................................................................29200.801600000084400000000
....................................................................................................................................................................................................................CCTGATCA-AACATCGTCGGATGTATT................................................................26150.801200000070410000000
............................................................................................................................................ACAATCTGCAGCGCCAAAACCCCTA..........................................................................................................................................25100.80800000000000044000
.........................................................................................................TCCGGACTACCGGCACAAGTTGGCGT............................................................................................................................................................................26140.791100010000501022000
....................................................................................................................................TCAGAAATACAATCTGCAGCGCC....................................................................................................................................................2380.75600200000002020000
....................................................................................................................................................................................................................CCTGATCA-AACATCGTCGGATGT...................................................................23160.751200100081200000000
...................................................................TTACCA------------CCACAAGG--GAACATT.........................................................................................................................................................................................................21200.7014000000000014000000
......................................................................................CACAAGG--GAACATTGAGTCCGGACTAC............................................................................................................................................................................................27200.7014000000100000121000
...........................................................................................................................................TACAATCTGCAGCGCCAAAACCCC............................................................................................................................................2490.67600000001001031000
...............................................................................................................................................................................................TTT-TTGTTTCTCGGCTTGCCCCTGA......................................................................................2530.67200010010000000000
..........................................................................................AGG--GAACATTGAGTCCGGACTACCGGC........................................................................................................................................................................................27200.651300000002505010000
.........................................................................................................TCCGGACTACCGGCAC......................................................................................................................................................................................16200.651300000085000000000
.....................................TGATTCCA-CCTGTCTCGAT-----.................................................................................................................................................................................................................................................19190.631200020000109000000
................................................................................................................................................TCTGCAGCGCCAAAACCCCTCGCGG......................................................................................................................................2580.63500300000020000000
...........................................................................................................................................TACAATCTGCAGCGCCAAAACCCCTCGC........................................................................................................................................2880.63500000021001010000
............................................................................................................................................ACAATCTGCAGCGCCAAAACCCCTCGCGG......................................................................................................................................2980.63500010000000040000
..................................................................................................................................................................................TAAAGA-AACAAATTT-TTGTTTCTCGGC................................................................................................27130.62800000051011000000
........................................................................................................................................................................................................................................................................GCCGAT---AATATAAAAGT...................17200.6012000000000012000000
............................................................................................................................................ACAATCTGCAGCGCCAAAACAA.............................................................................................................................................22100.60600000000000051000
............................................................................................................................................ACAATCTGCAGCGCCAAAACCCCTCA.........................................................................................................................................26100.60600000000000060000
....................................................................TACCA------------CCACAAGG--GAACATTGAGTCCGGAC...............................................................................................................................................................................................30200.601200000040000080000
.........................................................................................................TCCGGACTACCGGCACAAGTTGGCGA............................................................................................................................................................................26150.60900000010010070000
...............................AACCAGTGATTCCA-CCTGTCTCGAT-----.................................................................................................................................................................................................................................................25170.591000000010117000000
................................................................................................................TACCGGCACAAGTTGGCGCTTCA........................................................................................................................................................................23140.57800000000002060000
...........................................................................................................CGGACTACCGGCACAAGTTGGCGCTTA.........................................................................................................................................................................27140.57800000000000080000
..............................................................TAGT-TTACCA------------CCACAAGG--GAA.............................................................................................................................................................................................................21200.551100000000009002000
..............................................................TAGT-TTACCA------------CCACAAGG--GAACATT.........................................................................................................................................................................................................25200.551100030000100070000
....................................................................................................TTGAGTCCGGACTACCGGCACAAGT..................................................................................................................................................................................25200.5511000000000011000000
..........................................................................................AGG--GAACATTGAGTCCGGACTACCGGCAC......................................................................................................................................................................................29200.551100000000005060000
.............................................................................................................................................................................................................GCTTGCCCCTGATCA-AACATCGTC.........................................................................2420.50100000000100000000
.........................................................................................................TCCGGACTACCGGCACAAGTTGGCGCC...........................................................................................................................................................................27160.50800700000000010000
...............................................................................................................................................................................................................TTGCCCCTGATCA-AACATCGTCGGATG....................................................................2720.50100000000000010000
.............................................................................................................................................................................................................GCTTGCCCCTGATCA-AACATCGTCGGA......................................................................2720.50100000010000000000
..........................................................................................................................................................................................................TCGGCTTGCCCCTGATCA-AACATCGTCG........................................................................2820.50100000000000001000
...........................................................................................................CGGACTACCGGCACAAGTTGGCGT............................................................................................................................................................................24140.50700010010002012000
.............................................................................................................................................................................................................................AACATCGTCGGATGT...................................................................15180.50900000000009000000
...........................................................................................................................................................................................................CGGCTTGCCCCTGATCA-AACATCGTCGG.......................................................................2820.50100000000000010000
.................................................................................................................................................................................................................GCCCCTGATCA-AACATCGTCGAT......................................................................2320.50100000010000000000
..............................................................................................................................................................................................................CTTGCCCCTGATCA-AACATCGTCGGATG....................................................................2820.50100000000100000000
..........................................................................................................CCGGACTACCGGCACAAGTTGGCGC............................................................................................................................................................................25140.50700210000000040000
....................................................TCGAT-----TAGT-TTACCA------------CCACAAGG--................................................................................................................................................................................................................23200.501000000007030000000
..........................................................................................................CCGGACTACCGGCACAAGTTGGCGCTT..........................................................................................................................................................................27140.50700000010000060000
.......................................................................................................................................................................................................TTCTCGGCTTGCCCCTGATCA-AACATCGT..........................................................................2920.50100000000000010000
.................................................................................................................................................................................................................GCCCCTGATCA-AACATCGTCGGATA....................................................................2520.50100000000100000000
..................................................................................................................................................TGCAGCGCCAAAACCCCTCGCGGTGGT..................................................................................................................................2760.50300000010002000000
..............................................................................................................................................................................................................CTTGCCCCTGATCA-AACATCGTCGGAT.....................................................................2720.50100000000000001000
....................................................................................................................................TCAGAAATACAATCTGCAGCGCCAAAAC...............................................................................................................................................2880.50400010000100011000
................................................................................................................................................................................................................TGCCCCTGATCA-AACATCGTCGGATA....................................................................2620.50100000000000010000
..............................................................................................................................................................................................................CTTGCCCCTGATCA-AACATCGTC.........................................................................2320.50100000000100000000
.......................................................................................................................................................................................................TTCTCGGCTTGCCCCTGATCA-AACATCGTCG........................................................................3120.50100000000000010000
........................................................................A------------CCACAAGG--GAACATT.........................................................................................................................................................................................................16200.5010000000000010000000
...............................................................................................................................................................................................................TTGCCCCTGATCA-AACATCGTCGG.......................................................................2420.50100000010000000000
..................................................................................................................................................................................................................CCCCTGATCA-AACATCGTCGG.......................................................................21190.47900000001115001000
.....................................TGATTCCA-CCTGTCTCGAT-----TAGT-TT..........................................................................................................................................................................................................................................25170.47800000000503000000
.....................................................................................................................................................................................................................CTGATCA-AACATCGTCGGATGTAT.................................................................24150.47700000002005000000
....................................................................................................................................................................................................................................TCGGATGTATTGTCTTATATACAAGA.................................................26150.47700000030300010000
..........................TTCTCAACCAGTGATTCCA-CCTGTCTCGA.......................................................................................................................................................................................................................................................29130.46600000010410000000
.............................TCAACCAGTGATTCCA-CCTGTCTCGA.......................................................................................................................................................................................................................................................26130.46600000040200000000
................................................................GT-TTACCA------------CCACAAGG--GAACATTGAGTCCGGA................................................................................................................................................................................................32200.45900000090000000000
................................................................GT-TTACCA------------CCACAAGG--GAACATTGAGTC....................................................................................................................................................................................................28200.45900000000008010000
...............................................................AGT-TTACCA------------CCACAAGG--GAACATTGA.......................................................................................................................................................................................................26200.45900000021100050000
......................................................................................CACAAGG--GAACATTGAGTCCGGAC...............................................................................................................................................................................................24200.45900000011006010000
........................................................................A------------CCACAAGG--GAACATTGAGTCCGGA................................................................................................................................................................................................25200.45900000005022000000
................................................................GT-TTACCA------------CCACAAGG--GAA.............................................................................................................................................................................................................19200.45900000000008100000
.........................................................................................................................................AATACAATCTGCAGCGCCAAAACCCCT...........................................................................................................................................2790.44400000000002020000
.........................................................................................................................................AATACAATCTGCAGCGCCAAAACCC.............................................................................................................................................2590.44400000000100021000
...........................................................................................................................................TACAATCTGCAGCGCCAAAACAA.............................................................................................................................................2390.44400000000000040000
..................................CAGTGATTCCA-CCTGTCTCGAT-----TAGT-............................................................................................................................................................................................................................................26180.44800300000102020000
...........................................................................................................................................TACAATCTGCAGCGCCAAAACCCCTCGCGG......................................................................................................................................3070.43300000010200000000
.................................................................................................................................................................................................................................TCGTCGGATGTATTGTCTTATATACAA...................................................27150.40600000010001040000
...............................................................AGT-TTACCA------------CCACAAGG--GAACATT.........................................................................................................................................................................................................24200.40800000000000080000
....................................................TCGAT-----TAGT-TTACCA------------CCACAAGG--GAT.............................................................................................................................................................................................................26200.40800000025100000000
................................................................GT-TTACCA------------CCACAAGG--GAACATTGAGT.....................................................................................................................................................................................................27200.40800020000006000000
....................................................................TACCA------------CCACAAGG--GAACATTGAGTCCGGA................................................................................................................................................................................................29200.40800010031300000000
............................................................................................................................................ACAATCTGCAGCGCCAAAACA..............................................................................................................................................21100.40400000000000022000
............................................................................................................................................ACAATCTGCAGCGCCAAAACCCCTCGA........................................................................................................................................27100.40400000000000013000
...................................AGTGATTCCA-CCTGTCTCGAT-----TAGT-............................................................................................................................................................................................................................................25180.39700000021004000000
.............................TCAACCAGTGATTCCA-CCTGTCTCGAT-----TA...............................................................................................................................................................................................................................................29130.38500000030200000000
...................................................................................................................................TTCAGAAATACAATCTGCAGCGCC....................................................................................................................................................2480.38300000001011000000
...........................................................................................................CGGACTACCGGCACAAGTTGGCGCC...........................................................................................................................................................................25160.38600600000000000000
............................................................................................................................................ACAATCTGCAGCGCCAAAACCCCTCAA........................................................................................................................................27110.36400000000000040000
..........................................................................................................CCGGACTACCGGCACAAGTTGGCGCTTC.........................................................................................................................................................................28140.36500000000000050000
................................................................................................................TACCGGCACAAGTTGGCGC............................................................................................................................................................................19140.36500000000005000000
................................................................................................................TACCGGCACAAGTTGGCGCTTCAG.......................................................................................................................................................................24140.36500000000014000000
......................................................................................................................................................................................................................TGATCA-AACATCGTCGGATGTATTGT..............................................................26140.36500000011201000000
..................................................................................................................................................................................................................CCCCTGATCA-AACATCGTCGGATGC...................................................................25170.35600600000000000000
...................................................................TTACCA------------CCACAAGG--GAACATTGAGTC....................................................................................................................................................................................................26200.35700010000105000000
....ATTGTC-------CGCATTGGTTTCT.................................................................................................................................................................................................................................................................................1930.33100000000001000000
....ATTGTC-------CGCATTGGTTTCTC................................................................................................................................................................................................................................................................................2030.33100010000000000000
.......GTC-------CGCATTGGTTTCT.................................................................................................................................................................................................................................................................................1630.33100000000001000000
......TGTC-------CGCATTGGTTTCTCA...............................................................................................................................................................................................................................................................................1930.33100000000001000000
.........................................................................................................................................................................................AACAAATTT-TTGTTTCTCGGCTTG.............................................................................................2430.33100000000000010000
...............................................................................................................................................................................................TTT-TTGTTTCTCGGCTTGCC...........................................................................................2030.33100000000000001000
CCGAATTGTC-------CGCATTGGTT....................................................................................................................................................................................................................................................................................2030.33100010000000000000
..GAATTGTC-------CGCATTGGTT....................................................................................................................................................................................................................................................................................1830.33100000000001000000
.......GTC-------CGCATTGGTTTCTC................................................................................................................................................................................................................................................................................1730.33100000000001000000
...................................................................................................................................................................................................................CCCTGATCA-AACATCGTCGGATGTATT................................................................27150.33500200011001000000
CCGAATTGTC-------CGCATTGGTTTCTCAA..............................................................................................................................................................................................................................................................................2630.33100000010000000000
.........................................................................................................................................AATACAATCTGCAGCGCCAAAACCCC............................................................................................................................................2690.33300000000101010000
.CGAATTGTC-------CGCATTGGTTTCT.................................................................................................................................................................................................................................................................................2230.33100000000000010000
.........................................................................................................................................AATACAATCTGCAGCGCCAAAACC..............................................................................................................................................2490.33300000000001020000
.CGAATTGTC-------CGCATTGGTTTCTCA...............................................................................................................................................................................................................................................................................2430.33100000000001000000
................................................................................................................................................................................................TT-TTGTTTCTCGGCTTGCCCCTGA......................................................................................2430.33100000010000000000
.CGAATTGTC-------CGCATTGGT.....................................................................................................................................................................................................................................................................................1830.33100000000001000000
...AATTGTC-------CGCATTGGTTTCTCA...............................................................................................................................................................................................................................................................................2230.33100000000100000000
CCGAATTGTC-------CGCATTGGTTTCTC................................................................................................................................................................................................................................................................................2430.33100010000000000000
.......................................................................................................AGTCCGGACTACCGGCACAAGTTGGCGC............................................................................................................................................................................28120.33400000000004000000
.......................................................................................................................................................................................................TTCTCGGCTTGCCCCTGATCA-AACATC............................................................................2730.33100000000000010000
.....................................TGATTCCA-CCTGTCTCGAT-----TA...............................................................................................................................................................................................................................................21190.32600010020300000000
droSec2
CCGAATTGTC-------TGCACTTGTTTCTCAACCAGTGATTCCA-CCTGTCTCGAT-----TAGT-TTACCG------------CCACAAGG--GAACATTGAGTCCGGACTACCGGCACAAGTTGGCGCTTCAGAAACACAATCTGCAGCGCCAAAACCCCTCGCGGTGGTTCCACTAAAGA-AACAAATTT-TTGTTTCTCGGCTTTCCCCTGATCA-AACATCGTCGGATGTATTGTCTTATATACAAGACAAAACAAAAGCCGAT---AATATAAAAGTGG-----------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................................................................................................................................................CCCTGATCA-AACATCGTCGGATGTAT.................................................................26202.004040000
........................................................T-----TAGT-TTACCG------------CCACAAGG--GAACA...........................................................................................................................................................................................................2440.5022000
...................................................................................................................................................................................................................CCCTGATCA-AACATCGTCGGATGT...................................................................24200.3570007
...................................................................................................................................TTCAGAAACACAATCTGCAGCGC.....................................................................................................................................................2340.2511000
....................................................................................................................................TCAGAAACACAATCTGCAGCGCCAAA.................................................................................................................................................2640.2510010
...................................AGTGATTCCA-CCTGTCTCGAT-----TAGT-TT..........................................................................................................................................................................................................................................27200.0511000
...................................................................................................ATTGAGTCCGGACTACCGGCA.......................................................................................................................................................................................21200.0511000
................................................................................................AACATTGAGTCCGGACTACCG..........................................................................................................................................................................................21200.0510001
..................................................................................................................................................................................................................................................................ACAAAAGCCGAT---AATATAAAAGT...................23200.0511000
....................................................................................................................................................................................................TGTTTCTCGGCTTTCCCCTGA......................................................................................21200.0510100
................................................................................................................TACCGGCACAAGTTGGCGCTT..........................................................................................................................................................................21200.0511000
....................................................................................................................................................................................................................CCTGATCA-AACATCGTCGGATGTATT................................................................26200.0511000
droYak3
T------GTC-------CGCACTGGTTTCTCAACCGGTGATTCCA-CCCGTCCCGAA-----TTGT-TAACCA------------CCACAAAG--A-------AGTCCGGACTACCGGCTCAAGTTGGCACTTCAGAAATACAACCTGCAGTGCCAAAACCCCTCTCGGTGGTTCCACTAAAGA-AACAAATTT-TTGTTTCTCGGCTTTCCCCTGATCA-AACATCATCTGATGTACTGTCTTATATACAAGACAAAACAAAAGCCGAC---AACATAAAAGTGG-----------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................................................................................................AGAAATACAACCTGCAGTGCCAAAACCCC............................................................................................................................................29200.6513012100000000
......................................................................................................................................AGAAATACAACCTGCAGTGCCAAAACCC.............................................................................................................................................28200.25503200000000
...................................................................................................................................................................................................................CCCTGATCA-AACATCATCTGAT.....................................................................22200.15303000000000
.......................................................................................................................TCAAGTTGGCACTTCAGAAATACAACC.............................................................................................................................................................27140.14201100000000
................................................................................................................TACCGGCTCAAGTTGGCACTTCAGAAA....................................................................................................................................................................27190.11202000000000
....................................................................................................................................................................................AAGA-AACAAATTT-TTGTTTCTCGGCC...............................................................................................26200.10200200000000
.......................................................................................................................TCAAGTTGGCACTTCAGAAATACAAC..............................................................................................................................................................26140.07101000000000
.........................................................................................................TCCGGACTACCGGCTCAAGTTGGCAC............................................................................................................................................................................26170.06100100000000
.........................................................................................................TCCGGACTACCGGCTCAAGTTGGCACT...........................................................................................................................................................................27170.06101000000000
...................................................................................................................................TTCAGAAATACAACCTGCAGTGCCAA..................................................................................................................................................26200.05101000000000
..................................................................................................................................................................................................................................................TTATATACAAGACAAAACAAAAGCC....................................25200.05101000000000
.................................................................................................................................................................................................................................................CTTATATACAAGACAAAACAAAAGCC....................................26200.05100100000000
...........................................................................................................................................................................................................CGGCTTTCCCCTGATCA-AACATCATC.........................................................................26200.05101000000000
.................................................................................................................................................................................................................TCCCCTGATCA-AACATCATCTGATGTT..................................................................27200.05100100000000
...................................................................................................................................................................................................................................ATCTGATGTACTGTCTTATATACAAG..................................................26200.05101000000000
...........................TCTCAACCGGTGATTCCA-CCCGTCC..........................................................................................................................................................................................................................................................25200.05101000000000
...................................................................................................................................................................................................................CCCTGATCA-AACATCATCTGATGTAC.................................................................26200.05100100000000
..........................TTCTCAACCGGTGATTCCA-CCCGTC...........................................................................................................................................................................................................................................................25200.05101000000000
..........................TTCTCAACCGGTGATTCCA-CCCGTCC..........................................................................................................................................................................................................................................................26200.05100100000000
............................................................................................................................................ACAACCTGCAGTGCCAAAACCCCTC..........................................................................................................................................25200.05100100000000
..........................................................................................................................................................................................................TCGGCTTTCCCCTGATCA-AACA..............................................................................22200.05101000000000
.................................................................................................................................................................................................................TCCCCTGATCA-AACATCATCTGA......................................................................23200.05101000000000
..................................................................................................................................................................................................................CCCCTGATCA-AACATCATCTGATGTACT................................................................28200.05100100000000
.............................................................................................................................................................................TCCACTAAAGA-AACAAATTT-TTGTTT......................................................................................................26200.05101000000000
droEre2
CTGCACTG----------------GTTTCTCAACCAGTGATTCCGATCTGTCCCGAT-----TAGT-TTACCC------------CCAAAAAG--GAATATTGAGTCCGGACTACTGGTGCAGATTGAGCCTTCAAAAACACAATCTGCAGTGCCAAAACTCCTCACGGTGTTTCCACTAAAAAAAATAAATTTGTGGTTTCTCGGATTTCCACTGACCA-AACATCATCTGATGTATTGTCTTATGTACAAGACAAAAGAAAAACCGAT---AACATAAATGTGG-----------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............................................................................................................CTACTGGTGCAGATTGAGCCT...........................................................................................................................................................................2132.0060000330
......................................................................................................................................................................................................TTTCTCGGATTTCCACTGACC....................................................................................2131.0032000010
................................................................................................................................................................................................TTGTGGTTTCTCGGATTTCCA..........................................................................................2131.0032000010
................................................................................................................TACTGGTGCAGATTGAGCCTT..........................................................................................................................................................................2131.0030000030
.................................................GTCCCGAT-----TAGT-TTACCC------------CCA.......................................................................................................................................................................................................................2140.7532000010
................................ACCAGTGATTCCGATCTGTCC..........................................................................................................................................................................................................................................................2130.6721000100
.........................TTTCTCAACCAGTGATTCCG..................................................................................................................................................................................................................................................................2030.6721000100
.......................................................................................................................................................TGCCAAAACTCCTCACGGTGT...................................................................................................................................2130.6720000110
.................................................................................................ATATTGAGTCCGGACTACTGG.........................................................................................................................................................................................2130.6722000000
...................................................................................................ATTGAGTCCGGACTACTGGTG.......................................................................................................................................................................................2130.6720000020
..................................................................................................TATTGAGTCCGGACTACTGGT........................................................................................................................................................................................2130.6720010100
................................................................................................AATATTGAGTCCGGACTACTG..........................................................................................................................................................................................2130.6721000010
.................................................................................................................................................CTGCAGTGCCAAAACTCCTCA.........................................................................................................................................2140.5022000000
...............................................................................................................................................................................................................TTTCCACTGACCA-AACATCAT..........................................................................2130.3311000000
.........................................................................................................TCCGGACTACTGGTGCAGATTG................................................................................................................................................................................2230.3311000000
........................................................................................................................CAGATTGAGCCTTCAAAAACA..................................................................................................................................................................2130.3311000000
....................................................................................................TTGAGTCCGGACTACTGGTGC......................................................................................................................................................................................2130.3311000000
........................................................................................AAAAG--GAATATTGAGTCCGG.................................................................................................................................................................................................2030.3311000000
.......................................................................................................................................................................................................TTCTCGGATTTCCACTGACCA-..................................................................................2130.3311000000
................................................................................................................................................................................................TTGTGGTTTCTCGGATTTCCAT.........................................................................................2230.3311000000
...............................................................AGT-TTACCC------------CCAAAAAG--GA..............................................................................................................................................................................................................1930.3311000000
.............................................................................................................................................................................................................GATTTCCACTGACCA-AACAT.............................................................................2030.3311000000
........................................................T-----TAGT-TTACCC------------CCAAAAAG--G...............................................................................................................................................................................................................2030.3311000000
........................................................................................................................................................GCCAAAACTCCTCACGGTGTT..................................................................................................................................2130.3310000100
.................................................................................................ATATTGAGTCCGGACTACTGGT........................................................................................................................................................................................2230.3310000010
........................GTTTCTCAACCAGTGATTCCG..................................................................................................................................................................................................................................................................2130.3311000000
..............................................................................................................ACTACTGGTGCAGATTGAG..............................................................................................................................................................................1930.3310000010
................................................................................................................TACTGGTGCAGATTGAGCCTTCAAAA.....................................................................................................................................................................2630.3311000000
...........................................CGATCTGTCCCGAT-----TAGT-TTA.........................................................................................................................................................................................................................................2130.3310000100
................................................TGTCCCGAT-----TAGT-TTACCC------------CC........................................................................................................................................................................................................................2130.3311000000
....................................................................TACCC------------CCAAAAAG--GAATATTGAGTCCGG.................................................................................................................................................................................................2830.3311000000
.................................................................................................ATATTGAGTCCGGACTACTGGTTT......................................................................................................................................................................................2430.3310000010
...................................AGTGATTCCGATCTGTCCCGA.......................................................................................................................................................................................................................................................2130.3310000100
.........................................................................................................................................................................................................CTCGGATTTCCACTGACCA-A.................................................................................2030.3311000000
...................................................................................................................................................................................................TGGTTTCTCGGATTTCCACTG.......................................................................................2130.3310000010
.........................................TCCGATCTGTCCCGAT-----TAGT-TTACCC------------C.........................................................................................................................................................................................................................2730.3311000000
................................................................................................................TACTGGTGCAGATTGAGCCT...........................................................................................................................................................................2030.3311000000
..................................CAGTGATTCCGATCTGTCCCG........................................................................................................................................................................................................................................................2130.3311000000
....................................................................................................................................................................................................................................TCTGATGTATTGTCTTATGTACAAGACA...............................................2840.2511000000
...........................................................................................................................................................................................................................................TATTGTCTTATGTACAAGACA...............................................2140.2511000000
.......................................................................................................................................................TGCCAAAACTCCTCACGGTG....................................................................................................................................2040.2511000000
............................................................................................................................................ACAATCTGCAGTGCCAAAACTCCTCA.........................................................................................................................................2640.2511000000
.....................................................................................................TGAGTCCGGACTACTGGTGC......................................................................................................................................................................................2040.2511000000
......................................................................................................................................AAAAACACAATCTGCAGTGCC....................................................................................................................................................2140.2511000000
...................................................................................................................................TTCAAAAACACAATCTGCAGT.......................................................................................................................................................2140.2510000010
......................................................................................................................................................GTGCCAAAACTCCTCACGGTG....................................................................................................................................2140.2511000000

Generated: 06/08/2015 at 04:24 PM