ID:

dpe_1527

 Coordinate:

scaffold_37:751515-751679 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-10.2 -10.2 -9.5 -9.5

Flybase annnotation

CDS [Dper\GL11758-cds]; CDS [Dper\GL11758-cds]; exon [dper_GLEANR_11926:4]; exon [dper_GLEANR_11926:3]; intron [Dper\GL11758-in]

No Repeatable elements found

mature
star
  1. scaffold_37:739119-739143 +
  2. dpe_1527  scaffold_37:751567-751591 -

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CTCCCTGCCCCGAAAGATGAATACTGTCTCGACGGGCGTAGCCGCCTCCTGTGCGATGCACAACTGCTTCGACCACTCCCGTTGCAGCCTCACCTCCGGCTTTCCAGTATACCTTTATGACCCCGACGAACACAACGTCCAGCGAACTGGCTACGATATCGATGGCTTACTTAAGACAACTCTCTAACAAACGCTCGGCTACAACGCGCACATAGTGAGGGATCCAACGCAAGCCTGCATCTACCTGGTGCTGGTAGGCGAGGCT
******************************************************************************************************************************************...((((...(((((((....)).)))))...........................)).))****************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V042
embryo
 V057
head
...............................................................................................................................................................................ACAACTCTCTAACAAACGCTCGGC.................................................................. 24 0 1 3.00 3 3 0 0 0
...................................................................................................................................................................................CTCTCTAACAAACGCTCGGCT................................................................. 21 0 1 1.00 1 1 0 0 0
...............................................................................................................................................................................ACAACTCTCTAACAAACGCTCGGCTA................................................................ 26 0 1 1.00 1 1 0 0 0
..................................................................................................................................................................TGGCTTACTTAAGACAACTCT.................................................................................. 21 0 1 1.00 1 1 0 0 0
...............................................................................................................................................................................ACAACTCTCTAACAAACGCTCGGCT................................................................. 25 0 1 1.00 1 1 0 0 0
...............................................................................................................................................................................ACAACTCTCTAACAAACGCTCGG................................................................... 23 0 1 1.00 1 1 0 0 0
........................................................................................................................................................................................TAACAAACGCTCGGCTACAACGCGCACA..................................................... 28 0 1 1.00 1 1 0 0 0
.............................................................................................................................................................................................AACGCTCGGCTACAACGC.......................................................... 18 0 3 0.67 2 0 2 0 0
................ATGAATACTGTCTCGACGGGC.................................................................................................................................................................................................................................... 21 0 3 0.67 2 0 2 0 0
........................................................................................................................................................................................................................GAGGGATCCAACGCAAGCCTG............................ 21 0 3 0.67 2 2 0 0 0
...............GATGAATACTGTCTCGACGGGC.................................................................................................................................................................................................................................... 22 0 3 0.67 2 0 2 0 0
......................................................................................................................................................................................................CTACAACGCGCACATAGTGAG.............................................. 21 0 3 0.67 2 2 0 0 0
..............................................................................................................................................CGAACTGGATACGATATCGATT..................................................................................................... 22 2 2 0.50 1 1 0 0 0
...........................................................ACAACTGCTTCGACCACTCT.......................................................................................................................................................................................... 20 1 2 0.50 1 1 0 0 0
...............................................................CTGCTTCGACCACTCCCGTTGA.................................................................................................................................................................................... 22 1 2 0.50 1 1 0 0 0
..........................................................................................................................................CCAGCGAACTGGCTACGATATCGAT...................................................................................................... 25 0 2 0.50 1 1 0 0 0
..........................................................................................CACCTCCGGCTTTCCAGTGTACCTCTA.................................................................................................................................................... 27 2 2 0.50 1 1 0 0 0
..........................................................CACAACTGCTTCGACCACTC........................................................................................................................................................................................... 20 0 2 0.50 1 1 0 0 0
........................TGTCTCGACGGGCGTAGCCGC............................................................................................................................................................................................................................ 21 0 3 0.33 1 0 0 0 1
........................TGTCTCGACGGGCGTAGC............................................................................................................................................................................................................................... 18 0 3 0.33 1 1 0 0 0
..................GAATACTGGCTCGACGGGCGT.................................................................................................................................................................................................................................. 21 1 3 0.33 1 1 0 0 0
..............AGATGAATACTGTCTCGACG....................................................................................................................................................................................................................................... 20 0 3 0.33 1 1 0 0 0
..........................................................................................................................CCGACGAACACAACGTCCAGCGA........................................................................................................................ 23 0 3 0.33 1 1 0 0 0
................ATGAATACTGTCTCGACGG...................................................................................................................................................................................................................................... 19 0 3 0.33 1 0 0 1 0
...........................................................................................................................................................................................................................................TGCATCTACCTGGTGCTGGTAGGCGAGG.. 28 0 3 0.33 1 1 0 0 0
..........................TCTCGACGGGCGTAGCCGCCTCCTG...................................................................................................................................................................................................................... 25 0 3 0.33 1 1 0 0 0
........................TGTCTCGACGGGCGTAGCC.............................................................................................................................................................................................................................. 19 0 3 0.33 1 1 0 0 0
........................TGTCTCGACGGGCGTAGCCGCCTC......................................................................................................................................................................................................................... 24 0 3 0.33 1 1 0 0 0
..............AGATGAATACTGTCTCGACGG...................................................................................................................................................................................................................................... 21 0 3 0.33 1 1 0 0 0
.................................................................................................................................ACACAACGTCCAGCGAACTGGCTACG.............................................................................................................. 26 0 3 0.33 1 1 0 0 0
................................................................................................................................AACACAACGTCCAGCGAACT..................................................................................................................... 20 0 3 0.33 1 0 1 0 0
.......................................................................................................................................................................................................................TGAGGGATCCAACGCAAGCCT............................. 21 0 3 0.33 1 1 0 0 0
...................................................................................................................................ACAACGTCCAGCGAACTGG................................................................................................................... 19 0 3 0.33 1 1 0 0 0
...........................CTCGACGGGCGTAGCCGCCT.......................................................................................................................................................................................................................... 20 0 3 0.33 1 1 0 0 0
...........................................................................................................................................................................................................ACGCGCACATAGTGAGGGATC......................................... 21 0 3 0.33 1 1 0 0 0
.................................................................................................................................................................................................................................................TACCTGGTGCTGGTAGGCGAG... 21 0 3 0.33 1 1 0 0 0
............................................CCTCCTGTGCGATGCACAACTGCTT.................................................................................................................................................................................................... 25 0 3 0.33 1 1 0 0 0
.................................................................................................................................................................................................................................................TACCTGGTGCTGGCAGGGAA.... 20 3 8 0.13 1 1 0 0 0

Anti-sense strand reads

GAGGGACGGGGCTTTCTACTTATGACAGAGCTGCCCGCATCGGCGGAGGACACGCTACGTGTTGACGAAGCTGGTGAGGGCAACGTCGGAGTGGAGGCCGAAAGGTCATATGGAAATACTGGGGCTGCTTGTGTTGCAGGTCGCTTGACCGATGCTATAGCTACCGAATGAATTCTGTTGAGAGATTGTTTGCGAGCCGATGTTGCGCGTGTATCACTCCCTAGGTTGCGTTCGGACGTAGATGGACCACGACCATCCGCTCCGA
******************************************************************...((((...(((((((....)).)))))...........................)).))****************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V111
male body		 M021
embryo
 V057
head
........................................................................GGTGAGGGCAACGTCGGAGT............................................................................................................................................................................. 20 0 2 1.00 2 2 0 0 0
........................................................................................GAGTGGAGGCCGAAAGGTCATAT.......................................................................................................................................................... 23 0 2 1.00 2 2 0 0 0
.......................................................................................GGAGTGGAGGCCGAAAGGTCATAT.......................................................................................................................................................... 24 0 2 1.00 2 2 0 0 0
................................................................................................................................................................CTACCGAATGAATTCTGTTGAGAGA................................................................................ 25 0 1 1.00 1 1 0 0 0
.................................................................................................................................................................TACCGAATGAATTCTGTTGAGAG................................................................................. 23 0 1 1.00 1 1 0 0 0
..............................................................................................................................................................AGCTACCGAATGAATTCTGTTGAGAGA................................................................................ 27 0 1 1.00 1 1 0 0 0
....................................................................................................................................................CCGATGCTATAGCTACCGAAT................................................................................................ 21 0 1 1.00 1 1 0 0 0
.................................................................................................................................................................TACCGAATGAATTCTGTTGAGAGA................................................................................ 24 0 1 1.00 1 1 0 0 0
...................................................................AAGCTGGTGAGGGCAACGTCGGAGTG............................................................................................................................................................................ 26 0 2 1.00 2 0 2 0 0
...............................................................................................................................CTTGTGTTGCAGGTCGCTTGACCGA................................................................................................................. 25 0 3 0.67 2 2 0 0 0
.......................................................................................................................................GCAGGTCGCTTGACCGATGCTAT........................................................................................................... 23 0 3 0.67 2 2 0 0 0
..........................................................................................................................................................................................................................CCCTAGGTTGCGTTCGGACG........................... 20 0 3 0.67 2 2 0 0 0
...........................................................................................TGGAGGCCGAAAGGTCATATGG........................................................................................................................................................ 22 0 2 0.50 1 1 0 0 0
............................................................................................GGAGGCCGAAAGGTCACATGGAGATACT................................................................................................................................................. 28 2 2 0.50 1 1 0 0 0
.........................................................................................................TCATATGGAAATACTGGGGCTGCT........................................................................................................................................ 24 0 2 0.50 1 1 0 0 0
..........................................................................................GTGGAGGCCGAAAGGTCAT............................................................................................................................................................ 19 0 2 0.50 1 1 0 0 0
.............................................................................................GAGGCCGAAAGGTCATATGGAAATACT................................................................................................................................................. 27 0 2 0.50 1 1 0 0 0
......................................................................................CGGAGTGGAGGCCGAAAGGTCATAT.......................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0
........GGGCTTTCTACTTATGAC............................................................................................................................................................................................................................................... 18 0 2 0.50 1 1 0 0 0
...........................................................................................TGGAGGCCGAAAGGTCATATGGA....................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0
......................................................................................CGGAGTGGAGGCCGAAAGGTCATATGG........................................................................................................................................................ 27 0 2 0.50 1 0 1 0 0
.........................................................................................................TCATATGGAAATACTGGGGCTGC......................................................................................................................................... 23 0 2 0.50 1 1 0 0 0
..............................................................................................AGGCCGAAAGGTCATATGGAAATACT................................................................................................................................................. 26 0 2 0.50 1 1 0 0 0
...GGACGGGGCTTTCTACTTA................................................................................................................................................................................................................................................... 19 0 2 0.50 1 1 0 0 0
...................................................................................CGTCGGAGTGGAGGCCGAAAGGTCAT............................................................................................................................................................ 26 0 2 0.50 1 1 0 0 0
............................................................................................GGAGGCCGAAAGGTCATATGGAAATACT................................................................................................................................................. 28 0 2 0.50 1 1 0 0 0
...........................................................................................TGGAGGCCGAAAGGTCATA........................................................................................................................................................... 19 0 2 0.50 1 1 0 0 0
...............................................................................................GGCCGAAAGGTCATATGGAAATACT................................................................................................................................................. 25 0 2 0.50 1 1 0 0 0
....GACGGGGCTTTCTACTTATGACAGAGC.......................................................................................................................................................................................................................................... 27 0 2 0.50 1 1 0 0 0
......................................................ATACGTGTTGACGAAGCTGGT.............................................................................................................................................................................................. 21 1 2 0.50 1 1 0 0 0
.......................................................................................GGAGTGGAGGCCGAAAGGTCATATG......................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0
.................................................................................................CCGAAAGGTCACATGGAGAT.................................................................................................................................................... 20 2 2 0.50 1 1 0 0 0
........................................................................................................................................................................................................................................CGGACGTAGATGGACCACGACCAT......... 24 0 3 0.33 1 1 0 0 0
..................CTTATGACAGAGCTGCCCGC................................................................................................................................................................................................................................... 20 0 3 0.33 1 0 0 1 0
...............................................................................................................................................................................................................CGTGTATCACTCCCTAGGTTG..................................... 21 0 3 0.33 1 1 0 0 0
...........................................................................................................................GCTGCTTGTGTTGCAGGTCGC......................................................................................................................... 21 0 3 0.33 1 1 0 0 0
................................................................................................................TAGATACTGGGGCTGCTTGT..................................................................................................................................... 20 2 3 0.33 1 1 0 0 0
................................................................................................................................................................................................................................GCGGCGTTCGGACGTAGATGG.................... 21 2 3 0.33 1 1 0 0 0
...............................................GGACACGCTACGTGTTGACGAAG................................................................................................................................................................................................... 23 0 3 0.33 1 1 0 0 0
.............................................................................................................................TGCTTGTGTTGCAGGTCGCTT....................................................................................................................... 21 0 3 0.33 1 1 0 0 0
...................................................................................................................................................................................................................TTTCACTCCCTAGGTTGCGT.................................. 20 1 3 0.33 1 1 0 0 0
.....................ATGACAGAGCTGCCCGCATC................................................................................................................................................................................................................................ 20 0 3 0.33 1 1 0 0 0
....................TATGACAGAGCTGCCCGCATC................................................................................................................................................................................................................................ 21 0 3 0.33 1 1 0 0 0
.........................................................................................................................GGGCTGCTTGTGTTGCAGG............................................................................................................................. 19 0 3 0.33 1 1 0 0 0
..................................................................................................................................GTGTTGCAGGTCGCTTGACCGAT................................................................................................................ 23 0 3 0.33 1 1 0 0 0
..............................................AGGACACGCTACGTGTTGACGAAGCT................................................................................................................................................................................................. 26 0 3 0.33 1 1 0 0 0
.........................................GGCGGAGGACACGCTACGTGTTGAC....................................................................................................................................................................................................... 25 0 3 0.33 1 1 0 0 0
...........................................................................GAGGGCAACGTCGGAGTG............................................................................................................................................................................ 18 0 3 0.33 1 1 0 0 0
...............................................GGACACGCTACGTGTTGACGAAGC.................................................................................................................................................................................................. 24 0 3 0.33 1 1 0 0 0
..........................................................................................................................................................................................................................................GACGTAGATGGACCACGACCA.......... 21 0 3 0.33 1 1 0 0 0
................................................................................................................................................................................................CGAGCCGATGTTGCGCGTGTA.................................................... 21 0 3 0.33 1 1 0 0 0
............................................................................................................................................................................................................CCGCGTGTATCACTCCCTAGGTT...................................... 23 1 3 0.33 1 1 0 0 0
.............................................................................................................................TGCATGGGTTGCAGGTCGGTT....................................................................................................................... 21 3 7 0.14 1 0 1 0 0
.........................................................................................................................CGGCTGCTTGTTTGGCAGGT............................................................................................................................ 20 3 10 0.10 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_37:751465-751729 - dpe_1527 CTCCCTGCCCCGAAAGATGAATACTGTCTCGACGGGCGTAGCCGCCTCCTGTGCGATGCACAACTGCTTCGACCACTCCCGTTGCAGCCTCACCTCCGGCTTTCCAGTATACCTTTATGACCCCGACGAACACAACGTCCAGCGAACTGGCTACGATATCGATGGCTTACTTAAGACAACTCTCTAACAAACGCTCGGCTACAACGCGCACATAGTGAGGGATCCAACGCAAGCCTGCATCTACCTGGTGCTGGTAGGCGAGGCT
dp5 3:19737872-19738136 + CTCCCTGCCCCAAAAGATGAATACTGTCTCGACGGGCGTAGCCGCCTCCTGTGCGATGCACAACTGCTTCGACCACTCCCGTTGCAGCCTCACCTCCGGCTTTCCAGTATACCTTTATGACCCCGACGAACACAACGTCCAGCGAACTGGCTACGATATCGATGGCTTCCTTAAGACAACTCTCAAACAAACGCTCGGCTACAACGCGCACATAGTGAGGGATCCAACGCAAGCCTGCATCTACCTGGTGCTGGTAGGCGAGGCT
droWil2 scf2_1100000004822:1697937-1698201 + TGCTTTACCGCGAAAAATGAATGCAGTTTCAGTGGGAGTGACCGCCTCCTGTGAGATGCACAATTGCTTTGATCACTCCCGTTGCAGTTTGACCTCTGGTTTCCCGGTCTATCTCTACGACCCGGATGAATATGGTGTCCAAAGAAAAGGATATGATATAGATGGCTTCCTAAAGACCACACTGAAACAGACTTTGGGCTACAATGTGCATATTGTAAAGGAACCAAAGCAGGCTTGCATATATTTGGTGCTGGTGGGTGAGGCA
droVir3 scaffold_13324:2666165-2666429 + CTCTCTTCCGCGCAAGATGAACGCAGTCGGCAAAGGCATTGCAGCCGCCTGTGAGATGCACAATTGCTTTGACCACTCGCGCTGCAGTCTTACCTCCGGGTTTCCAGTCTACCTTTACGATCCAGACGTTTACAATGTGCAGCGTGCGGGTTACGACATCGACGGCTTCTTGAAGACCACACTAAAACAAACTTTAGGCTACAATGCGCACATTGTGCGAGATCCCAAACTAGCCTGTATTTACCTGGTACTGGTGGGTGAAGCT
droMoj3 scaffold_6496:14135888-14136152 - TTCGCTGCCTCGCAGAATGAATGGCATTAGCGATGGCGTTGCAGCTGCCTGCGAGATGCACAATTGCTTCGATCACTCACGTTGTAGCCTCACGTCCGGCTTTCCCGTCTATCTGTACGATCCGGACGTCTACAATGTACAGCGCTCGGGCTACGATATCGATGGATTCCTAAAGACGACCATAAAACAAACTTTGGGCTACAATGCGCACATTGTGCGAGATCCCAAACAGGCTTGCATCTACCTTGTGCTTGTGGGAGAGGCT
droGri2 scaffold_15112:4811517-4811781 + CTATTTGCCACGCAAAATGAATGCGATCAGTGCTGGCGTGGCCGCTTCGTGTGAGATTCATAATTGTTTTGATCACTCACGGTGCAGTCTTACGTCCGGTCTTCCGGTCTATCTCTACGATCCGGATGTTTACAATGTGCAGCATGCTGGCTACGATATCGATGGCTTCCTAAAGACGACCATTAAACAAACACTGGGTTATAATGCGCACATTGTGCGTGATCCGAAGCAGGCCTGCATTTATCTCGTTCTGGTGGGTGAGGCA
droAna3 scaffold_13266:12760165-12760429 - CACCTTGCCTCGAAGGATGAGTCCTATTTCATGGGGCATGGCAGCCAGCTGCGAAATGCACAACTGCTTCAATCATTCTCGATGTAGTTTGACCTCTGGCTTTCCTGTGTACCTGTACGACCCGGATGAACATAGCGTGCAAAAACATGGTTATGATATTGACGGTTTCTTAAAGACCACTATTAAGCAAACATTGGGATACAATGCGCATATTGTAAGAGACCCTAAAATGGCGTGCATTTATTTGGTGCTCGTGGGTGAGGCT
droBip1 scf7180000396691:59930-60194 + CACTCTGCCTCGAAAGATGAATCCCATTTCCTCGGGAATGGCAGCCAGCTGCGAAATGCACAACTGCTTCAATCACTCTCGCTGTAGTTTGACCTCAGGTTTTCCTGTGTACCTCTACGACCCAGATGAACACAGCGTACAAAAACATGGCTACGACATCGACGGTTTTTTAAAGACCACCCTTAAGCAAACATTGGGCTACAATGCGCATATTGTAAGGGACCCCAAAATGGCATGCATTTACCTGGTGCTTGTGGGTGAGGCT
droKik1 scf7180000302682:815792-816056 + CTCCCTGCCCAGGAAGATGAATCCCATAACGGCGGGCATGGCGGCCAGCTGTGAGATGCACAATTGCTTCAATCACTCGAGATGCAGCCTGACTTCCGGATTCCCTGTTTACCTCTACGATCCCGATGAGCACAGTGTGCAGCGTCATGGCTACGACATTGATGGCTTCCTGAAGACAACCCTCAAGCAGACGCTGGGCTACAATGCTCACATTGTCAAGGACCCTAAGCAGGCTTGCATATATCTGGTGCTGGTGGGTGAAGCA
droFic1 scf7180000454044:828500-828764 + CATGCTGCCCAGAAAGATAAATCCCATAACTGGAGGGATGGCAGCAAGCTGCGAGATGCACAATTGCTTTAACCACTCGCGCTGCAGTCTCACCTCCGGGTTTCCCGTCTATCTCTACGATCCAGATGAACACAGCGTGCAGAGGAAAGGGTACGATATCGATGGTTTCCTGAAAACCACACTGAAACAGACTTTGGGGTACAATGCCCATATTGTTAAGGATCCCAAGCAGGCCTGCATTTATCTGGTGCTGGTGGGAGAGGCT
droEle1 scf7180000491152:80636-80900 + CACACTGCCTAGACGGATGAATCCCATCAGTGGGGGAATGGCAGCCAGCTGCGAGATGCACAATTGCTTCAACCACTCGCGATGCAGTCTAACCTCCGGATTTCCAGTCTATCTGTACGATCCCGATGAGCATAGTGTGCAGCGAAAGGGCTACGATATCGATGGTTTCCTGAAGACCACGCTGAAACAGACTTTGGGCTACAATGCGCACATAGTTAAGGATCCCAAGCATGCCTGCATATATCTAGTGCTGGTGGGAGAGGCA
droRho1 scf7180000780106:245205-245469 - CACGCTGCCCAGAAAGATGAATCCCATCACTGCAGGAATGGCAGCCAGCTGCGAGATGCACAACTGTTTTAATTACTCCCGCTGCAGTCTTACCTCCGGATTTCCTGTTTATTTGTACGATCCGGATGAGCATAGTGTGCAGCGAAAGGGTTACGATATCGATGGTTTCCTAAAGACCACTCTGAAACAGACTTTGGGATACAATGCCCATATAGTTAAGGATCCCAAGCATGCCTGCATATATCTGGTGCTGGTGGGAGAGGCT
droBia1 scf7180000302292:1325731-1325995 - CACACTGCCAAGGAGGATGAATCCCATCACTGGAGGAATGGCGGCCAGCTGCGAGATGCACAACTGCTTTAATCACTCCCGCTGCAGCCTTACCTCAGGATTTCCCGTTTATCTGTACGATCCAGATGAGCATGGCGTGCAGAGAAAGGGCTACGATATCGATGGTTTCCTGAAGACCACGCTGAAACAGACTTTGGGATACAATGCGCATATAGTCAAGGATCCCAAGCATGCCTGCATCTACCTGGTGCTTGTGGGAGAGGCT
droTak1 scf7180000415991:528681-528945 + CACACTGCCCAGGAAAATGAATCCCATCACTGGAGGAATGGCAGCCAGCTGCGAGATGCACAACTGCTTTAATCACTCGCGCTGCAGTCTGACCTCCGGATTTCCTGTTTATCTGTACGACCCAGACGAGCATAGCGTTCAGCGAAAGGGCTACGATATCGATGGTTTCTTAAAGACCACGCTGAAACAAACATTAGGCTACAATGCCCACATAGTCAAGGATCCCAAGCATGCCTGCATCTATTTGGTGCTGGTGGGAGAGGCT
droEug1 scf7180000409663:292102-292366 - CACACTGCCAAGGAAAATGAATCCCATCACTGGAGGAATGGCAGCCAGCTGCGAAATGCACAACTGTTTTAATCACTCCCGCTGCAGTCTTACCTCGGGATTCCCTGTTTATCTTTACGATCCAGATGAGCATAGCGTGCAGAGGAAGGGTTACGATATCGATGGCTTTTTAAAGACCACACTAAAACAGACTTTGGGCTATAATGCTCATATAGTTAAGGATCCAAAGCATGCTTGCATATATCTGGTGCTGGTGGGAGAAGCT
dm3 chr2R:15018286-15018550 + CACACTGCCAAGAAAGAGTAATCCCATCACCGGAGGGATGGCGGCCAGCTGCGAAATGCACAACTGCTTCAATCACTCACGCTGCAGTCTAACCTCCGGATTTCCTGTTTATCTATACGATCCGGATGAGCATAGCGTTCAGCGAAAGGGTTACGATATCGATGGTTTCCTAAAGACGACTCTAAAGCAGACTTTAGGATACAATGCTCATATAGTTAAGGATCCCAAGCATGCCTGCATATATCTAGTTCTGGTGGGAGAGGCT
droSim2 2r:15668710-15668974 + CACACTGCCCAGAAAGAATAATCCCATCACTGGAGGGATGGCGGCCAGCTGCGAAATGCACAACTGCTTCAATCACTCCCGCTGCAGCCTAACCTCCGGATTCCCTGTTTATCTGTACGATCCGGATGAGCATAGCGTACAGCGAAAGGGTTACGATATCGATGGTTTCCTGAAGACGACTCTAAAGCAGACTTTGGGATACAATGCTCATATAGTTAAGGATCCCAAGCATGCCTGCATATATCTAGTGCTGGTGGGAGAGGCT
droSec2 scaffold_1:12531345-12531609 + CACACTGCCCAGAAAGAATAATCCCATCACTGGAGGGATGGCGGCCAGCTGCGAAATGCACAACTGCTTCAATCACTCCCGCTGCAGTCTAACCTCCGGATTTCCTGTTTATCTGTACGATCCGGATGAGCATAGCGTACAGCGAAAGGGTTACGATATCGATGGTTTCCTGAAGACGACTCTAAAGCAGACTTTGGGATACAATGCTCATATAGTTAAGGATCCCAAGCATGCCTGCATATATCTAGTGCTGGTGGGAGAGGCT
droYak3 2R:14161770-14162034 - CACACTGCCCAGAAAGAATAATCCCATCACTGGAGGAATGGCGGCCAGCTGCGAAATGCACAACTGCTTCAATCACTCCCGCTGCAGTCTAACCTCCGGATTTCCTGTTTACCTGTACGATCCAGATGAGCATAGCGTACAGCGAAAGGGTTACGATATCGATGGTTTCCTGAAGACGACTCTAAAGCAGACTTTGGGCTACAATGCTCATATAGTTAAGGATCCCAAGCACGCCTGCATATATCTAGTGCTGGTGGGAGAGGCG
droEre2 scaffold_4845:9217975-9218239 + CACACTACCCAGAAAGAATAATCCCATCACTGGAGGAATGGCGGCCAGCTGCGAAATGCACAACTGCTTTAATCACTCGCGCTGTAGTCTAACCTCCGGCTTTCCTGTTTATCTGTACGATCCGGATGAGCATAGCGTACAGCGAAAGGGTTACGATATCGATGGCTTCCTGAAGACAACTCTAAAGCAGACTTTGGGATACAATGCTCATATAGTTAAGGATCCCAAGCACGCCTGCATATATCTAGTGCTGGTGGGAGAGGCT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
CTCCCTGCCCCGAAAGATGAATACTGTCTCGACGGGCGTAGCCGCCTCCTGTGCGATGCACAACTGCTTCGACCACTCCCGTTGCAGCCTCACCTCCGGCTTTCCAGTATACCTTTATGACCCCGACGAACACAACGTCCAGCGAACTGGCTACGATATCGATGGCTTACTTAAGACAACTCTCTAACAAACGCTCGGCTACAACGCGCACATAGTGAGGGATCCAACGCAAGCCTGCATCTACCTGGTGCTGGTAGGCGAGGCTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................................................................................................................................................................ACAACTCTCTAACAAACGCTCGGC..................................................................2413.003030000
...................................................................................................................................................................................CTCTCTAACAAACGCTCGGCT.................................................................2111.001010000
...............................................................................................................................................................................ACAACTCTCTAACAAACGCTCGGCTA................................................................2611.001010000
..................................................................................................................................................................TGGCTTACTTAAGACAACTCT..................................................................................2111.001010000
...............................................................................................................................................................................ACAACTCTCTAACAAACGCTCGGCT.................................................................2511.001010000
...............................................................................................................................................................................ACAACTCTCTAACAAACGCTCGG...................................................................2311.001010000
........................................................................................................................................................................................TAACAAACGCTCGGCTACAACGCGCACA.....................................................2811.001010000
.............................................................................................................................................................................................AACGCTCGGCTACAACGC..........................................................1830.672200000
................ATGAATACTGTCTCGACGGGC....................................................................................................................................................................................................................................2130.672200000
........................................................................................................................................................................................................................GAGGGATCCAACGCAAGCCTG............................2130.672020000
...............GATGAATACTGTCTCGACGGGC....................................................................................................................................................................................................................................2230.672200000
......................................................................................................................................................................................................CTACAACGCGCACATAGTGAG..............................................2130.672020000
...........................................................ACAACTGCTTCGACCACTCT..........................................................................................................................................................................................2020.501010000
...............................................................CTGCTTCGACCACTCCCGTTGA....................................................................................................................................................................................2220.501010000
..........................................................................................................................................CCAGCGAACTGGCTACGATATCGAT......................................................................................................2520.501010000
..........................................................CACAACTGCTTCGACCACTC...........................................................................................................................................................................................2020.501010000
........................TGTCTCGACGGGCGTAGCCGC............................................................................................................................................................................................................................2130.331000010
........................TGTCTCGACGGGCGTAGC...............................................................................................................................................................................................................................1830.331010000
..............AGATGAATACTGTCTCGACG.......................................................................................................................................................................................................................................2030.331010000
..........................................................................................................................CCGACGAACACAACGTCCAGCGA........................................................................................................................2330.331010000
................ATGAATACTGTCTCGACGG......................................................................................................................................................................................................................................1930.331001000
...........................................................................................................................................................................................................................................TGCATCTACCTGGTGCTGGTAGGCGAGG..2830.331010000
..........................TCTCGACGGGCGTAGCCGCCTCCTG......................................................................................................................................................................................................................2530.331010000
........................TGTCTCGACGGGCGTAGCC..............................................................................................................................................................................................................................1930.331010000
........................TGTCTCGACGGGCGTAGCCGCCTC.........................................................................................................................................................................................................................2430.331010000
..............AGATGAATACTGTCTCGACGG......................................................................................................................................................................................................................................2130.331010000
.................................................................................................................................ACACAACGTCCAGCGAACTGGCTACG..............................................................................................................2630.331010000
................................................................................................................................AACACAACGTCCAGCGAACT.....................................................................................................................2030.331100000
.......................................................................................................................................................................................................................TGAGGGATCCAACGCAAGCCT.............................2130.331010000
...................................................................................................................................ACAACGTCCAGCGAACTGG...................................................................................................................1930.331010000
...........................CTCGACGGGCGTAGCCGCCT..........................................................................................................................................................................................................................2030.331010000
...........................................................................................................................................................................................................ACGCGCACATAGTGAGGGATC.........................................2130.331010000
.................................................................................................................................................................................................................................................TACCTGGTGCTGGTAGGCGAG...2130.331010000
............................................CCTCCTGTGCGATGCACAACTGCTT....................................................................................................................................................................................................2530.331010000
dp5
CTCCCTGCCCCAAAAGATGAATACTGTCTCGACGGGCGTAGCCGCCTCCTGTGCGATGCACAACTGCTTCGACCACTCCCGTTGCAGCCTCACCTCCGGCTTTCCAGTATACCTTTATGACCCCGACGAACACAACGTCCAGCGAACTGGCTACGATATCGATGGCTTCCTTAAGACAACTCTCAAACAAACGCTCGGCTACAACGCGCACATAGTGAGGGATCCAACGCAAGCCTGCATCTACCTGGTGCTGGTAGGCGAGGCTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................................................................................................................................................TTCCTTAAGACAACTCTCAAACAAA..........................................................................2531.0030000000300
.............................................................................................................TACCTTTATGACCCCGAC..........................................................................................................................................1820.5010100000000
...........AAAAGATGAATACTGTCTCGACGGGC....................................................................................................................................................................................................................................2620.5010000100000
.............................................................................................................TACCTTTATGACCCCGACGAA.......................................................................................................................................2120.5010100000000
..................................................................................................................................CACAACGTCCAGCGAACTGG...................................................................................................................2020.5010100000000
.....................................................................................................................................................................................................................................................TGGTGCTGGTAGGCGAGGC.1930.3310100000000
....................................................................................................................................................................................................................................GCAAGCCTGCATCTACCTGGT................2130.3310100000000
................ATGAATACTGTCTCGACGGGC....................................................................................................................................................................................................................................2130.3310000100000
................................................................................................................................................................GATGGCTTCCTTAAGACAACTCTC.................................................................................2430.3310001000000
.......................................................................................................................................................................................................TACAACGCGCACATAGTGAGGGATC.........................................2530.3310100000000
...................................................................................................................................................................................................................ATAGTGAGGGATCCAACGCA..................................2030.3310100000000
...................................................................................................................................................................................................................ATAGTGAGGGATCCAACGCAAGCCTGC...........................2730.3310010000000
..............AGATGAATACTGTCTCGACGGGC....................................................................................................................................................................................................................................2330.3310100000000
..................................................................CTTCGACCACTCCCGTTGCA...................................................................................................................................................................................2030.3310100000000
................................................................................................................................................................................................................................CAACGCAAGCCTGCATCTACC....................2130.3310100000000
..................GAATACTGTCTCGACGGGCG...................................................................................................................................................................................................................................2030.3310100000000
...............GATGAATACTGTCTCGACGGGC....................................................................................................................................................................................................................................2230.3310100000000
droWil2
TGCTTTACCGCGAAAAATGAATGCAGTTTCAGTGGGAGTGACCGCCTCCTGTGAGATGCACAATTGCTTTGATCACTCCCGTTGCAGTTTGACCTCTGGTTTCCCGGTCTATCTCTACGACCCGGATGAATATGGTGTCCAAAGAAAAGGATATGATATAGATGGCTTCCTAAAGACCACACTGAAACAGACTTTGGGCTACAATGTGCATATTGTAAAGGAACCAAAGCAGGCTTGCATATATTTGGTGCTGGTGGGTGAGGCASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................................................................................................................................................................................................................GTAAAGGAACCAAAGCAGGCT..............................2111.00100100
............................................................................TCCCGTTGCAGTTTGACCTCTGGTTTCC.................................................................................................................................................................2811.00110000
........................................ACCGCCTCCTGTGAGATGCAC............................................................................................................................................................................................................2111.00101000
....................ATGCAGTTTCAGTGGGAGTGACCGCC...........................................................................................................................................................................................................................2611.00100010
....................ATGCAGTTTCAGTGGGAGT..................................................................................................................................................................................................................................1911.00100010
...............................................................................................................TCTCTACGACCCGGATGAATATGGT.................................................................................................................................2511.00100100
..................GAATGCAGTTTCAGTGGGAGT..................................................................................................................................................................................................................................2111.00100100
droVir3
CTCTCTTCCGCGCAAGATGAACGCAGTCGGCAAAGGCATTGCAGCCGCCTGTGAGATGCACAATTGCTTTGACCACTCGCGCTGCAGTCTTACCTCCGGGTTTCCAGTCTACCTTTACGATCCAGACGTTTACAATGTGCAGCGTGCGGGTTACGACATCGACGGCTTCTTGAAGACCACACTAAAACAAACTTTAGGCTACAATGCGCACATTGTGCGAGATCCCAAACTAGCCTGTATTTACCTGGTACTGGTGGGTGAAGCTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................................GCACAATTGCTTTGACCACTC...........................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
..................................................................................................................................TACAATGTGCAGCGTGCGGG...................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
.............AAGATGAACGCAGTCGGCAAA.......................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000010000000000000000000000000
..........................................................................ACTCGCGCTGCAGTCTTACCT..........................................................................................................................................................................2111.001100000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................TTTACCTGGTACTGGTGGGT......2011.001001000000000000000000000000000000000000000000000000000000000000
........................................................TGCACAATTGCTTTGACCACTCGCGCTGC....................................................................................................................................................................................2911.001000100000000000000000000000000000000000000000000000000000000000
..............................................................................................TCCGGGTTTCCAGTCTACC........................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................AACAAACTTTAGGCTACAATGC..........................................................2211.001001000000000000000000000000000000000000000000000000000000000000
............CAAGATGAACGCAGTCGGC..........................................................................................................................................................................................................................................1911.001010000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................GCGTGCGGGTTACGACATCG........................................................................................................2011.001000000000010000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................CCTGGTACTGGTGGGTGAAG..2011.001000000000000000000000000000000001000000000000000000000000000000
......................................................................................................................................................................................................................GTGCGAGATCCCAAACTAGCCTGT...........................2411.001001000000000000000000000000000000000000000000000000000000000000
......................................TTGCAGCCGCCTGTGAGA.................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................CTTCTTGAAGACCACACTAA................................................................................2011.001000000000000000000000000000000100000000000000000000000000000000
CTCTCTTCCGCGCAAGATGAA....................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................AACTTTAGGCTACAATGCGC........................................................2011.001000100000000000000000000000000000000000000000000000000000000000
.......................................TGCAGCCGCCTGTGAGATGCACAAT.........................................................................................................................................................................................................2511.001000000000000000000000000000000010000000000000000000000000000000
droMoj3
TTCGCTGCCTCGCAGAATGAATGGCATTAGCGATGGCGTTGCAGCTGCCTGCGAGATGCACAATTGCTTCGATCACTCACGTTGTAGCCTCACGTCCGGCTTTCCCGTCTATCTGTACGATCCGGACGTCTACAATGTACAGCGCTCGGGCTACGATATCGATGGATTCCTAAAGACGACCATAAAACAAACTTTGGGCTACAATGCGCACATTGTGCGAGATCCCAAACAGGCTTGCATCTACCTTGTGCTTGTGGGAGAGGCTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....................................................................................AGCCTCACGTCCGGCTTTCCCGT.............................................................................................................................................................2311.001100000
......................................................................GATCACTCACGTTGTAGCC................................................................................................................................................................................1911.001000010
............................................................................................................CTATCTGTACGATCCGGAC..........................................................................................................................................1911.001100000
..........................................................................ACTCACGTTGTAGCCTCACGTCC........................................................................................................................................................................2311.001100000
droGri2
CTATTTGCCACGCAAAATGAATGCGATCAGTGCTGGCGTGGCCGCTTCGTGTGAGATTCATAATTGTTTTGATCACTCACGGTGCAGTCTTACGTCCGGTCTTCCGGTCTATCTCTACGATCCGGATGTTTACAATGTGCAGCATGCTGGCTACGATATCGATGGCTTCCTAAAGACGACCATTAAACAAACACTGGGTTATAATGCGCACATTGTGCGTGATCCGAAGCAGGCCTGCATTTATCTCGTTCTGGTGGGTGAGGCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.......................................................................................TCTTACGTCCGGTCTTCCG...............................................................................................................................................................1911.00110
.........................ATCAGTGCTGGCGTGGCC..............................................................................................................................................................................................................................1811.00110
......................................................................................................................................ATGTGCAGCATGCTGGCTACG..............................................................................................................2111.00110
.............................................................................CACGGTGCAGTCTTACGTCCG.......................................................................................................................................................................2111.00110
.............................................................................................................................................GCATGCTGGCTACGATATCGATGGCTT.................................................................................................2711.00110
.......................................................................................................................................................................................................................TGCGTGATCCGAAGCAGGCCTGCA..........................2411.00110
droAna3
CACCTTGCCTCGAAGGATGAGTCCTATTTCATGGGGCATGGCAGCCAGCTGCGAAATGCACAACTGCTTCAATCATTCTCGATGTAGTTTGACCTCTGGCTTTCCTGTGTACCTGTACGACCCGGATGAACATAGCGTGCAAAAACATGGTTATGATATTGACGGTTTCTTAAAGACCACTATTAAGCAAACATTGGGATACAATGCGCATATTGTAAGAGACCCTAAAATGGCGTGCATTTATTTGGTGCTCGTGGGTGAGGCTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................TCATGGGGCATGGCAGCCAG.........................................................................................................................................................................................................................2011.001100000
....................................................................................................................ACGACCCGGATGAACATAGC.................................................................................................................................2011.001010000
........................................................................................................................................................................................AAGCAAACATTGGGATACAAT............................................................2111.001001000
...........................TTCATGGGGCATGGCAGCCAGCT.......................................................................................................................................................................................................................2311.001010000
...........................................................................................................................................................................AAAGACCACTATTAAGCAAAC.........................................................................2111.001100000
..........................TTTCATGGGGCATGGCAGCCAG.........................................................................................................................................................................................................................2211.001100000
droBip1
CACTCTGCCTCGAAAGATGAATCCCATTTCCTCGGGAATGGCAGCCAGCTGCGAAATGCACAACTGCTTCAATCACTCTCGCTGTAGTTTGACCTCAGGTTTTCCTGTGTACCTCTACGACCCAGATGAACACAGCGTACAAAAACATGGCTACGACATCGACGGTTTTTTAAAGACCACCCTTAAGCAAACATTGGGCTACAATGCGCATATTGTAAGGGACCCCAAAATGGCATGCATTTACCTGGTGCTTGTGGGTGAGGCTSizeHit CountTotal NormTotal
No Reads
droKik1
CTCCCTGCCCAGGAAGATGAATCCCATAACGGCGGGCATGGCGGCCAGCTGTGAGATGCACAATTGCTTCAATCACTCGAGATGCAGCCTGACTTCCGGATTCCCTGTTTACCTCTACGATCCCGATGAGCACAGTGTGCAGCGTCATGGCTACGACATTGATGGCTTCCTGAAGACAACCCTCAAGCAGACGCTGGGCTACAATGCTCACATTGTCAAGGACCCTAAGCAGGCTTGCATATATCTGGTGCTGGTGGGTGAAGCASizeHit CountTotal NormTotal
No Reads
droFic1
CATGCTGCCCAGAAAGATAAATCCCATAACTGGAGGGATGGCAGCAAGCTGCGAGATGCACAATTGCTTTAACCACTCGCGCTGCAGTCTCACCTCCGGGTTTCCCGTCTATCTCTACGATCCAGATGAACACAGCGTGCAGAGGAAAGGGTACGATATCGATGGTTTCCTGAAAACCACACTGAAACAGACTTTGGGGTACAATGCCCATATTGTTAAGGATCCCAAGCAGGCCTGCATTTATCTGGTGCTGGTGGGAGAGGCTSizeHit CountTotal NormTotal
No Reads
droEle1
CACACTGCCTAGACGGATGAATCCCATCAGTGGGGGAATGGCAGCCAGCTGCGAGATGCACAATTGCTTCAACCACTCGCGATGCAGTCTAACCTCCGGATTTCCAGTCTATCTGTACGATCCCGATGAGCATAGTGTGCAGCGAAAGGGCTACGATATCGATGGTTTCCTGAAGACCACGCTGAAACAGACTTTGGGCTACAATGCGCACATAGTTAAGGATCCCAAGCATGCCTGCATATATCTAGTGCTGGTGGGAGAGGCASizeHit CountTotal NormTotal
No Reads
droRho1
CACGCTGCCCAGAAAGATGAATCCCATCACTGCAGGAATGGCAGCCAGCTGCGAGATGCACAACTGTTTTAATTACTCCCGCTGCAGTCTTACCTCCGGATTTCCTGTTTATTTGTACGATCCGGATGAGCATAGTGTGCAGCGAAAGGGTTACGATATCGATGGTTTCCTAAAGACCACTCTGAAACAGACTTTGGGATACAATGCCCATATAGTTAAGGATCCCAAGCATGCCTGCATATATCTGGTGCTGGTGGGAGAGGCTSizeHit CountTotal NormTotal
No Reads
droBia1
CACACTGCCAAGGAGGATGAATCCCATCACTGGAGGAATGGCGGCCAGCTGCGAGATGCACAACTGCTTTAATCACTCCCGCTGCAGCCTTACCTCAGGATTTCCCGTTTATCTGTACGATCCAGATGAGCATGGCGTGCAGAGAAAGGGCTACGATATCGATGGTTTCCTGAAGACCACGCTGAAACAGACTTTGGGATACAATGCGCATATAGTCAAGGATCCCAAGCATGCCTGCATCTACCTGGTGCTTGTGGGAGAGGCTSizeHit CountTotal NormTotal
No Reads
droTak1
CACACTGCCCAGGAAAATGAATCCCATCACTGGAGGAATGGCAGCCAGCTGCGAGATGCACAACTGCTTTAATCACTCGCGCTGCAGTCTGACCTCCGGATTTCCTGTTTATCTGTACGACCCAGACGAGCATAGCGTTCAGCGAAAGGGCTACGATATCGATGGTTTCTTAAAGACCACGCTGAAACAAACATTAGGCTACAATGCCCACATAGTCAAGGATCCCAAGCATGCCTGCATCTATTTGGTGCTGGTGGGAGAGGCTSizeHit CountTotal NormTotal
No Reads
droEug1
CACACTGCCAAGGAAAATGAATCCCATCACTGGAGGAATGGCAGCCAGCTGCGAAATGCACAACTGTTTTAATCACTCCCGCTGCAGTCTTACCTCGGGATTCCCTGTTTATCTTTACGATCCAGATGAGCATAGCGTGCAGAGGAAGGGTTACGATATCGATGGCTTTTTAAAGACCACACTAAAACAGACTTTGGGCTATAATGCTCATATAGTTAAGGATCCAAAGCATGCTTGCATATATCTGGTGCTGGTGGGAGAAGCTSizeHit CountTotal NormTotal
No Reads
dm3
CACACTGCCAAGAAAGAGTAATCCCATCACCGGAGGGATGGCGGCCAGCTGCGAAATGCACAACTGCTTCAATCACTCACGCTGCAGTCTAACCTCCGGATTTCCTGTTTATCTATACGATCCGGATGAGCATAGCGTTCAGCGAAAGGGTTACGATATCGATGGTTTCCTAAAGACGACTCTAAAGCAGACTTTAGGATACAATGCTCATATAGTTAAGGATCCCAAGCATGCCTGCATATATCTAGTTCTGGTGGGAGAGGCTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................................................................................................................................TTACGATATCGATGGTTTCCTA.............................................................................................2216.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................AAGGGTTACGATATCGATGGT...................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.............................................................................................................TATCTATACGATCCGGATGAG.......................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................AGCGTTCAGCGAAAGGGTTACGAT............................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................AATCCCATCACCGGAGGGA...................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................ATCTATACGATCCGGATGAGC......................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.........................ATCACCGGAGGGATGGCGGC............................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................TGCAGTCTAACCTCCGGAT....................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................CCAAGCATGCCTGCATATATCT...................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...ACTGCCAAGAAAGAGTAATCCC................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CCATCACCGGAGGGATGGCGG.............................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................ATACGATCCGGATGAGCATAG..................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000010000000000000000000000000000
.......................................................................................................................ATCCGGATGAGCATAGCGTA..............................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................GTTTATCTATACGATCCGGATGAGC......................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.......................................................................................................................ATCCGGATGAGCATAGCGTTCA............................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..............................................................................................................................................................TCGATGGTTTCCTAAAGACG.......................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................GCATGCCTGCATATATCT...................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................TATACGATCCGGATGAGCATAGCGTT..............................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................CTAACCTCCGGATTTCCTGTT............................................................................................................................................................2111.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................TGGTTTCCTAAAGACGACTCTAAAGCAG...........................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................ATCCGGATGAGCATAGCGTTT.............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................ATACAATGCTCATATAGTTAAGGATCC........................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................TGGTTTCCTAAAGACGACTCTAAAGC.............................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................TCAGCGAAAGGGTTACGATATCGATGG....................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
...............................................................................................................................................................................................................................................TATATCTAGTTCTGGTGGGAG.....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................GATCCGGATGAGCATAGCGTTCAGCATC.......................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................ACAATGCTCATATAGTTAAG.............................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................CTGCAGTCTAACCTCCGGATT...................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..............................................................................................................................................................................................................................................ATATATCTAGTTCTGGTGG........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................CCTGCATATATCTAGTTCTGGTGGGA......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................AGCATAGCGTTCAGCGAAAGGG...................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.............................................................................................................................................................................................GACTTTAGGATACAATGCT.........................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.........................................................................................................................................................................................................CAATGCTCATATAGTTAAGG............................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................TACGATCCGGATGAGCATAGCGTT..............................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................TGGTTTCCTAAAGACGACTCTAAAG..............................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................TGCGAAATGCACAACTGCTTC...................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................TCTATACGATCCGGATGAGCATAGCG................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................CTGCTTCAATCACTCACGC.......................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................ACCGGAGGGATGGCGGCCAG.........................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................TTTCCTAAAGACGACTCTAAAGCAG...........................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................ATATCTAGTTCTGGTGGGAGA....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................ACTTTAGGATACAATGCTCATATA...................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................TCTAGTTCTGGTGGGAGA....1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
................................................CTGCGAAATGCACAACTGCTTCAAT................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
..........................TCACCGGAGGGATGGCGGCC...........................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
............................................................................................CCTCCGGATTTCCTGTTTAT.........................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................TATACGATCCGGATGAGCATAGC.................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.........................................................GCACAACTGCTTCAATCACTCA..........................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................GATGGTTTCCTAAAGACGACT....................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................TAAAGACGACTCTAAAGCAGA..........................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................CCATCACCGGAGGGATGGCGGC............................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...ACTGCCAAGAAAGAGTAAT...................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................GATATCGATGGTTTCCTAAAGAC........................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.ACACTGCCAAGAAAGAGTAAT...................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................CTGCATATATCTAGTTCTGC...........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................AGCATGCCTGCATATATCTAGT................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................GAGCATAGCGTTCAGCGAAAG.....................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...............................................................................................................................GAGCATAGCGTTCAGCGAAAGG....................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...........................................................................................................................................................................................................................................TGCATATATCTAGTTCTGGTGGGAG.....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...............................................................................................................TCTATACGATCCGGATGAGC......................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................CTCCGGATTTCCTGTTTATCTATACGA.................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................TTAGGATACAATGCTCATAT....................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GCCAAGAAAGAGTAATCCCAT..............................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................TTTCCTAAAGACGACTCTAAA...............................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................CATATATCTAGTTCTGGTGGGAGAGGC.2711.0010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................CAGACTTTAGGATACAATGCT.........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GCGAAATGCACAACTGCTTC...................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................CATCACCGGAGGGATGGG...............................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................ATATATCTAGTTCTGGTGGGAGA....2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
..................................................................................................................ATACGATCCGGATGAGCAT....................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................GATGGCGGCCAGCTGCGAAATGC..............................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................GACTCTAAAGCAGACTTTAGG...................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....TGCCAAGAAAGAGTAATCCCAT..............................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................AGGGTTACGATATCGATGGTT..................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.............................................................................CACGCTGCAGTCTAACCTCCGGATTT..................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TAGGATACAATGCTCATATAGTTAAGG............................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
........................CATCACCGGAGGGATGGC...............................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CACACTGCCCAGAAAGAATAATCCCATCACTGGAGGGATGGCGGCCAGCTGCGAAATGCACAACTGCTTCAATCACTCCCGCTGCAGCCTAACCTCCGGATTCCCTGTTTATCTGTACGATCCGGATGAGCATAGCGTACAGCGAAAGGGTTACGATATCGATGGTTTCCTGAAGACGACTCTAAAGCAGACTTTGGGATACAATGCTCATATAGTTAAGGATCCCAAGCATGCCTGCATATATCTAGTGCTGGTGGGAGAGGCTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................................................TAGTGCTGGTGGGAGA....1645.5022000000840010000000
...................................................................................................................TACGATCCGGATGAGCATAGC.................................................................................................................................2112.00220000000000000000
...................................................................................................ATTCCCTGTTTATCTGTACGATCCGGA...........................................................................................................................................2711.00101000000000000000
...............................................................................................................TCTGTACGATCCGGATGAGC......................................................................................................................................2011.00100100000000000000
......................................................................................................................................................................TTCCTGAAGACGACTCTAAAGCAGAC.........................................................................2611.00100000000000001000
..................................................................................................................................................................TGGTTTCCTGAAGACGACT....................................................................................1911.00100000000000001000
................................................................................................................................................................................................................CATATAGTTAAGGATCCCAAGCATG................................2511.00100100000000000000
......................................................................................................................................................................TTCCTGAAGACGACTCTAAAGCAGA..........................................................................2511.00100000000000010000
..................................................................................................................GTACGATCCGGATGAGCATAGCGG...............................................................................................................................2411.00100100000000000000
......................................................................................................................................................................TTCCTGAAGACGACTCTAAAGCAGACT........................................................................2711.00100000000000001000
..................................................................................................................GTACGATCCGGATGAGCATAGC.................................................................................................................................2211.00101000000000000000
................................................................................................................CTGTACGATCCGGAT..........................................................................................................................................1511.00100000000001000000
.....................................................................................................................................................................TTTCCTGAAGACGACTCTAAAGCAGAC.........................................................................2711.00100000000000010000
.....................................................................................................................................................................................................................................................TAGTGCTGGTGGGAG.....1540.25100000000001000000
droSec2
CACACTGCCCAGAAAGAATAATCCCATCACTGGAGGGATGGCGGCCAGCTGCGAAATGCACAACTGCTTCAATCACTCCCGCTGCAGTCTAACCTCCGGATTTCCTGTTTATCTGTACGATCCGGATGAGCATAGCGTACAGCGAAAGGGTTACGATATCGATGGTTTCCTGAAGACGACTCTAAAGCAGACTTTGGGATACAATGCTCATATAGTTAAGGATCCCAAGCATGCCTGCATATATCTAGTGCTGGTGGGAGAGGCTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................................................................................................................CGATCCGGATGAGCATAGCGT...............................................................................................................................2111.0010001
..............................................................................................................ATCTGTACGATCCGGATGAGC......................................................................................................................................2111.0011000
.............................................................................................................................................................ATCGATGGTTTCCTGAAGACG.......................................................................................2111.0011000
................................................................................................................................................AAAGGGTTACGATATCGATGGTTTCC...............................................................................................2611.0010100
droYak3
CACACTGCCCAGAAAGAATAATCCCATCACTGGAGGAATGGCGGCCAGCTGCGAAATGCACAACTGCTTCAATCACTCCCGCTGCAGTCTAACCTCCGGATTTCCTGTTTACCTGTACGATCCAGATGAGCATAGCGTACAGCGAAAGGGTTACGATATCGATGGTTTCCTGAAGACGACTCTAAAGCAGACTTTGGGCTACAATGCTCATATAGTTAAGGATCCCAAGCACGCCTGCATATATCTAGTGCTGGTGGGAGAGGCGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................................................................AACCTCCGGATTTCCTGTTTACCTGTACG..................................................................................................................................................2911.00110000000000
.................................................................................................................................................................................................................................CAAGCACGCCTGCATATATCT...................2111.00101000000000
............................................................................................................TTACCTGTACGATCCAGATGAGC......................................................................................................................................2311.00100000010000
.....................................................................CAATCACTCCCGCTGCAGT.................................................................................................................................................................................1911.00101000000000
................................................................................................................................................................GATGGTTTCCTGAAGACGACTCT..................................................................................2311.00100000010000
droEre2
CACACTACCCAGAAAGAATAATCCCATCACTGGAGGAATGGCGGCCAGCTGCGAAATGCACAACTGCTTTAATCACTCGCGCTGTAGTCTAACCTCCGGCTTTCCTGTTTATCTGTACGATCCGGATGAGCATAGCGTACAGCGAAAGGGTTACGATATCGATGGCTTCCTGAAGACAACTCTAAAGCAGACTTTGGGATACAATGCTCATATAGTTAAGGATCCCAAGCACGCCTGCATATATCTAGTGCTGGTGGGAGAGGCTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............................................................CTGCTTTAATCACTCGCGCTG.....................................................................................................................................................................................2111.0011000000
......................................................................................................................GATCCGGATGAGCATAGCGT...............................................................................................................................2011.0011000000
..................................................................................................................GTACGATCCGGATGAGCATAGC.................................................................................................................................2211.0010000010
............................................................CAACTGCTTTAATCACTCGCGCTGT....................................................................................................................................................................................2511.0010000010
............................................................................................................................GATGAGCATAGCGTACAGCGA........................................................................................................................2111.0010000100
.........................................................................................................................................................................CTGAAGACAACTCTAAAGCA............................................................................2011.0010000100
........................................................................................................................................................................CCTGAAGACAACTCTAAAGCA............................................................................2111.0011000000
...........................CACTGGAGGAATGGCGGCCAGC........................................................................................................................................................................................................................2211.0010000100
.........................................................GCACAACTGCTTTAATCACTCGCGCT......................................................................................................................................................................................2611.0010000100
........................................................................................................CTGTTTATCTGTACGATCCGG............................................................................................................................................2111.0011000000
.....................................................................................................................CGATCCGGATGAGCATAGCGTA..............................................................................................................................2211.0010000010

Generated: 06/08/2015 at 04:20 PM