dpe_1484

exon [dper_GLEANR_22483:2]; CDS [Dper\GL20133-cds]; CDS [Dper\GL20133-cds]; exon [dper_GLEANR_22483:1]; intron [Dper\GL20133-in]

##################################################-------------------------------------------------------------------------------------------------------------------################################################## GCTTTGCGGCGCTCTCAATGCCAATCAAGGACGCATTGGGTTGGAAAAAGGTATGTGTTGCACAACAAAAGGTAGCACACTACTATATTCAATTCTACAATTTCAGGTTTTGGCGGTTTGGGCGGATTGGAAAACAAACATCCGCAAGAAGAACTCGAGCTACAGGTGGAGGGCCCTCCGCTCAGCAATCGCTTGGGGAATTGGAGGAGGAAGTG ******************************************************************************************.............(((((.((...(((..((((((((.....))...))))))..)))...)).)))))****************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M042 female body	V111 male body	M021 embryo	V042 embryo	V057 head
............................................................................................TTCTACAATTTCAGGTTTTGGCGGTT.................................................................................................	26	0	1	11.00	11	11	0	0	0	0
............................................................................................TTCTACAATTTCAGGTTTTGGCGG...................................................................................................	24	0	1	9.00	9	8	0	0	1	0
............................................................................................TTCTACAATTTCAGGTTTTGGCGGT..................................................................................................	25	0	1	6.00	6	6	0	0	0	0
.........................................................................................................................................................................................CAATCGCTTGGGGAATTGGAGG........	22	0	8	5.88	47	15	32	0	0	0
..........................................................................................AATTCTACAATTTCAGGTTTTGG......................................................................................................	23	0	1	5.00	5	5	0	0	0	0
............................................................................................TTCTACAATTTCAGGTTTTGGC.....................................................................................................	22	0	1	4.00	4	4	0	0	0	0
.........................................................................................................................................................................................CAATCGCTTGGGGAATTGGAGGA.......	23	0	8	3.25	26	4	22	0	0	0
.........................................................................................................................................................................................CAATCGCTTGGGGAATTGGAGGAG......	24	0	8	2.75	22	18	4	0	0	0
.........................................................................................................................................................................................CAATCGCTTGGGGAATTGGAG.........	21	0	8	2.38	19	6	13	0	0	0
..........................................................................................AATTCTACAATTTCAGGTTTTGGCGG...................................................................................................	26	0	1	2.00	2	2	0	0	0	0
...........................................................................................................................................ATCCGCAAGAAGAACTCGAGCT......................................................	22	0	1	2.00	2	0	0	2	0	0
............................................................................................TTCTACAATTTCAGGTTTTGGCG....................................................................................................	23	0	1	2.00	2	2	0	0	0	0
..................................................................................................................................AAAACAAACATCCGCAAGAAGAACT............................................................	25	0	1	2.00	2	2	0	0	0	0
..................................................................................................................................AAAACAAACATCCGCAAGAAGAAC.............................................................	24	0	1	2.00	2	2	0	0	0	0
..................................................................................................................................AAAACAAACATCCGCAAGAAGAACTCG..........................................................	27	0	1	2.00	2	2	0	0	0	0
.........................................................................................................................................................................................CAATCGCTTGGGGAATTGGA..........	20	0	8	1.13	9	1	8	0	0	0
....TGCGGCGCTCTCAATGCCAATCAAG..........................................................................................................................................................................................	25	0	1	1.00	1	1	0	0	0	0
...................................................................................................................................AAACAAACATCCGCAAGAAGAACTCG..........................................................	26	0	1	1.00	1	1	0	0	0	0
............................................................................................TTCTACAAATTCAGGTTTTGGCGGT..................................................................................................	25	1	1	1.00	1	1	0	0	0	0
............................................................................................TTCTACAAATTCAGGTTTTGGC.....................................................................................................	22	1	1	1.00	1	1	0	0	0	0
...............................................................................................................................TGGAAAACAAACATCCGCAAGAAGAACT............................................................	28	0	1	1.00	1	1	0	0	0	0
............................................................................................TTCTACAATTTCAGGTTTTGCGGTT..................................................................................................	25	3	1	1.00	1	1	0	0	0	0
........GCGCTCTCAATGCCAATCAAGG.........................................................................................................................................................................................	22	0	1	1.00	1	1	0	0	0	0
GCTTTGCGGCGCTCTCAATGCCA................................................................................................................................................................................................	23	0	1	1.00	1	1	0	0	0	0
.............................................................................................TCTACAATTTCAGGTTTTGGCGGTT.................................................................................................	25	0	1	1.00	1	1	0	0	0	0
..............TCAATGCCAATCAAGGACGCA....................................................................................................................................................................................	21	0	1	1.00	1	1	0	0	0	0
..............................................................................................................................TTGGAAAAGAAACATCCGCAAGAAGAACT............................................................	29	1	1	1.00	1	1	0	0	0	0
.......GGCGCTCTCAATGCCAATCAAGGAC.......................................................................................................................................................................................	25	0	1	1.00	1	1	0	0	0	0
............................................................................................TTCTACAATTTCAGGTTTTGG......................................................................................................	21	0	1	1.00	1	1	0	0	0	0
.............................................................................................TCTACAATTTCAGGTTTTGGCG....................................................................................................	22	0	1	1.00	1	1	0	0	0	0
.........................................................................................AAATTCTACAATTTCAGGTTTTGGCGG...................................................................................................	27	1	1	1.00	1	1	0	0	0	0
................................................................................................................GCGGTTTGGGCGGATTGG.....................................................................................	18	0	1	1.00	1	1	0	0	0	0
.............................................................................................TCTACAATGTCAGGTTTTGGCGG...................................................................................................	23	1	1	1.00	1	1	0	0	0	0
...TTGCGGCGCTCTCAATGCCAATCAA...........................................................................................................................................................................................	25	0	1	1.00	1	1	0	0	0	0
.............................................................................................TCTACAATTTCAGGTTTTGGCGG...................................................................................................	23	0	1	1.00	1	1	0	0	0	0
...........CTCTCAATGCCAATCAAGGAC.......................................................................................................................................................................................	21	0	1	1.00	1	1	0	0	0	0
............................................................................................TTCTACAAGTTCAGGTTTTGGCG....................................................................................................	23	1	1	1.00	1	1	0	0	0	0
...........................................GAAAAAGGTATGTGTTGCACAACA....................................................................................................................................................	24	0	8	0.88	7	2	5	0	0	0
...........................................GAAAAAGGTATGTGTTGCACAAC.....................................................................................................................................................	23	0	8	0.88	7	6	1	0	0	0
.........................................................................................................................................................................................CAATCGCTTGGGGAATTGGAGGAGG.....	25	0	8	0.75	6	5	1	0	0	0
.........................................................................................................................................................................................CAATCGCTTGGGGAATTGG...........	19	0	8	0.75	6	0	5	0	1	0
.....................................................................................................................................................................................TCAGCAATCGCTTGGGGAATTGGAG.........	25	0	6	0.50	3	3	0	0	0	0
.....................................................................................................................................................................................TCAGCAATCGCTTGGGGAATTGG...........	23	0	6	0.50	3	3	0	0	0	0
..........................................................................................................................................................................................AATCGCTTGGGGAATTGGAG.........	20	0	8	0.25	2	2	0	0	0	0
.........................................................................................................................................................................................CAATCGCTGGGGGAATTGGAGGAG......	24	1	8	0.25	2	2	0	0	0	0
..........................................................................................................................................................................................AATCGCTTGGGGAATTGGAGGA.......	22	0	8	0.25	2	2	0	0	0	0
..........................................................................................................................................................................................AATCGCTTGGGGAATTGGAGG........	21	0	8	0.25	2	2	0	0	0	0
.........................................................................................................................................................................................CAATCGCTTGGGGAATTGGAGGAGGA....	26	0	8	0.25	2	2	0	0	0	0
.........................................................................................................................................................................................CAATCGCTGGGGGAATTGGAGG........	22	1	8	0.25	2	2	0	0	0	0
..........................................................................................................................................................................................AATCGCTTGGGGAATTGGAGGAG......	23	0	8	0.25	2	2	0	0	0	0
........................TCAAGGACGCATTGGGTTGGAAAAA......................................................................................................................................................................	25	0	5	0.20	1	1	0	0	0	0
.......................ATCAAGGACGCATTGGGTTG............................................................................................................................................................................	20	0	5	0.20	1	1	0	0	0	0
.....................................................................................................................................................................................TCAGCAATGGCTTGGGGAATTGGAGG........	26	1	6	0.17	1	1	0	0	0	0
.....................................................................................................................................................................................TCAGCAATCGCTTGGGGAATTG............	22	0	6	0.17	1	1	0	0	0	0
....................................TGGGTTGGAAAAAGGTATGTG..............................................................................................................................................................	21	0	7	0.14	1	1	0	0	0	0
........................................TTGGAAAAAGGTATGTGTTGCA.........................................................................................................................................................	22	0	7	0.14	1	1	0	0	0	0
....................................TGGGTTGGAAAAAGGTATGTGTTGC..........................................................................................................................................................	25	0	7	0.14	1	1	0	0	0	0
..TTTGCGGCGCTCTCAATG...................................................................................................................................................................................................	18	0	7	0.14	1	0	0	1	0	0
.........................................................................................................................................................CTTGAGCTACAGGTGGATGG..........................................	20	2	7	0.14	1	0	0	0	1	0
..........................................................................................................................................................TCGAGCTACAGGTGGAGGGC.........................................	20	0	7	0.14	1	1	0	0	0	0
....................................TGGGATGGAAAGATGTATGTGT.............................................................................................................................................................	22	3	7	0.14	1	0	0	0	0	1
....................................TGGGTTGGAAAAAGGTATGCGT.............................................................................................................................................................	22	1	7	0.14	1	0	0	0	1	0
............................................................................................................................................................................................TCGCTTGGGGAATTGGAGGAGG.....	22	0	8	0.13	1	1	0	0	0	0
....................................................ATGAGGGGCACAACAAAAGGTAGCA..........................................................................................................................................	25	3	8	0.13	1	0	0	0	1	0
............................................AAAAAGGTATGTGTTGCACAAC.....................................................................................................................................................	22	0	8	0.13	1	0	0	0	1	0
.................................................................................................................................................................................................TGGGGAATTGGAGGAGGAAG..	20	0	8	0.13	1	1	0	0	0	0
.........................................................................................................................................................................................CAATCGCTTGGGGAATTGGAGA........	22	1	8	0.13	1	0	1	0	0	0
.............................................................................................................................................................AGCTACAGGTGGAGGGCC........................................	18	0	8	0.13	1	1	0	0	0	0
.........................................................................................................................................................................................CAATCGCTTGGGTAATTGGAG.........	21	1	8	0.13	1	0	1	0	0	0
.........................................................................................................................................................................................CAATCGCTCGGGGAATTGGAGG........	22	1	8	0.13	1	0	1	0	0	0
..........................................................................................................................................................................................AATCGCTTGGGGAATTGGAGGAGG.....	24	0	8	0.13	1	1	0	0	0	0
.....................................................TGTGTTGCACAACAAAAGGTAG............................................................................................................................................	22	0	8	0.13	1	1	0	0	0	0
....................................................................................................................................................................................................GGAATTGGAGGAGGAAGTG	19	0	8	0.13	1	1	0	0	0	0
..............................................................................................................................TTGGAAAACAAACATCCGCAAGAA.................................................................	24	0	8	0.13	1	1	0	0	0	0
..........................................................................GCACACTACGATCTTCAACTC........................................................................................................................	21	3	8	0.13	1	0	0	0	0	1
...........................................GAAAAAGGTATGTGTTGAA.........................................................................................................................................................	19	1	8	0.13	1	1	0	0	0	0
.........................................................................................................................................................................................CAATCGCTTGGGGAATTGGAA.........	21	1	8	0.13	1	0	0	0	1	0
.........................................................................................................................................................................................CAATCGCTAGGGGAATTGGAGGAGG.....	25	1	8	0.13	1	1	0	0	0	0
............................................................................................................................................................................................TCGCTTGGGGAATTGGAGGA.......	20	0	8	0.13	1	1	0	0	0	0
.........................................................................................................................................................................................CAATCGCTGGGGGAATTGGAG.........	21	1	8	0.13	1	1	0	0	0	0
............................................AAAAAGGTATGTGTTGCACAACAA...................................................................................................................................................	24	0	8	0.13	1	1	0	0	0	0
.........................................................................................................................................................................................CAATCGCTTGGGGAATTCGAGGA.......	23	1	8	0.13	1	0	1	0	0	0
........................................................................................................................................................................................GCAATCGCTTGGGGAATTGGAGGA.......	24	0	8	0.13	1	1	0	0	0	0
..............................................................................................................................TTGGAAAACAAACATCCGCAAGAAG................................................................	25	0	8	0.13	1	1	0	0	0	0
...........................................GAAAAAGGGATGTGTTGCACAA......................................................................................................................................................	22	1	8	0.13	1	1	0	0	0	0
.........................................................................................................................................................................................CAATCGCTTGGGGAATTG............	18	0	8	0.13	1	1	0	0	0	0
.........................................................................................................................................................................................CAATCGCTTGGGGAATTGGAGTAGG.....	25	1	9	0.11	1	1	0	0	0	0
.........................................................................................................................................................................................CAATCGCTTGGGGAATTGGAGT........	22	1	9	0.11	1	0	1	0	0	0
..............................................................................................................TGGCGGTCTGGGTGGATTGT.....................................................................................	20	3	15	0.07	1	0	0	0	0	1

##################################################-------------------------------------------------------------------------------------------------------------------##################################################
GCTTTGCGGCGCTCTCAATGCCAATCAAGGACGCATTGGGTTGGAAAAAGGTATGTGTTGCACAACAAAAGGTAGCACACTACTATATTCAATTCTACAATTTCAGGTTTTGGCGGTTTGGGCGGATTGGAAAACAAACATCCGCAAGAAGAACTCGAGCTACAGGTGGAGGGCCCTCCGCTCAGCAATCGCTTGGGGAATTGGAGGAGGAAGTG
********************************************************************************************.............(((((.((...(((..((((((((.....))...))))))..)))...)).)))))******************************************************

Read size

# Mismatch

Hit Count

Total Norm

Total

M042
female body

V111
male body

M021
embryo

V042
embryo

V057
head

............................................................................................TTCTACAATTTCAGGTTTTGGCGGTT.................................................................................................

11.00

............................................................................................TTCTACAATTTCAGGTTTTGGCGG...................................................................................................

9.00

............................................................................................TTCTACAATTTCAGGTTTTGGCGGT..................................................................................................

6.00

.........................................................................................................................................................................................CAATCGCTTGGGGAATTGGAGG........

5.88

..........................................................................................AATTCTACAATTTCAGGTTTTGG......................................................................................................

5.00

............................................................................................TTCTACAATTTCAGGTTTTGGC.....................................................................................................

4.00

3.25

2.75

2.38

..........................................................................................AATTCTACAATTTCAGGTTTTGGCGG...................................................................................................

2.00

...........................................................................................................................................ATCCGCAAGAAGAACTCGAGCT......................................................

2.00

............................................................................................TTCTACAATTTCAGGTTTTGGCG....................................................................................................

2.00

..................................................................................................................................AAAACAAACATCCGCAAGAAGAACT............................................................

2.00

..................................................................................................................................AAAACAAACATCCGCAAGAAGAAC.............................................................

2.00

..................................................................................................................................AAAACAAACATCCGCAAGAAGAACTCG..........................................................

2.00

1.13

....TGCGGCGCTCTCAATGCCAATCAAG..........................................................................................................................................................................................

1.00

...................................................................................................................................AAACAAACATCCGCAAGAAGAACTCG..........................................................

1.00

............................................................................................TTCTACAAATTCAGGTTTTGGCGGT..................................................................................................

1.00

............................................................................................TTCTACAAATTCAGGTTTTGGC.....................................................................................................

1.00

...............................................................................................................................TGGAAAACAAACATCCGCAAGAAGAACT............................................................

1.00

............................................................................................TTCTACAATTTCAGGTTTTGCGGTT..................................................................................................

1.00

........GCGCTCTCAATGCCAATCAAGG.........................................................................................................................................................................................

1.00

GCTTTGCGGCGCTCTCAATGCCA................................................................................................................................................................................................

1.00

.............................................................................................TCTACAATTTCAGGTTTTGGCGGTT.................................................................................................

1.00

..............TCAATGCCAATCAAGGACGCA....................................................................................................................................................................................

1.00

..............................................................................................................................TTGGAAAAGAAACATCCGCAAGAAGAACT............................................................

1.00

.......GGCGCTCTCAATGCCAATCAAGGAC.......................................................................................................................................................................................

1.00

............................................................................................TTCTACAATTTCAGGTTTTGG......................................................................................................

1.00

.............................................................................................TCTACAATTTCAGGTTTTGGCG....................................................................................................

1.00

.........................................................................................AAATTCTACAATTTCAGGTTTTGGCGG...................................................................................................

1.00

................................................................................................................GCGGTTTGGGCGGATTGG.....................................................................................

1.00

.............................................................................................TCTACAATGTCAGGTTTTGGCGG...................................................................................................

1.00

...TTGCGGCGCTCTCAATGCCAATCAA...........................................................................................................................................................................................

1.00

.............................................................................................TCTACAATTTCAGGTTTTGGCGG...................................................................................................

1.00

...........CTCTCAATGCCAATCAAGGAC.......................................................................................................................................................................................

1.00

............................................................................................TTCTACAAGTTCAGGTTTTGGCG....................................................................................................

1.00

...........................................GAAAAAGGTATGTGTTGCACAACA....................................................................................................................................................

0.88

...........................................GAAAAAGGTATGTGTTGCACAAC.....................................................................................................................................................

0.88

0.75

0.50

0.25

........................TCAAGGACGCATTGGGTTGGAAAAA......................................................................................................................................................................

0.20

.......................ATCAAGGACGCATTGGGTTG............................................................................................................................................................................

0.20

0.17

....................................TGGGTTGGAAAAAGGTATGTG..............................................................................................................................................................

0.14

........................................TTGGAAAAAGGTATGTGTTGCA.........................................................................................................................................................

0.14

....................................TGGGTTGGAAAAAGGTATGTGTTGC..........................................................................................................................................................

0.14

..TTTGCGGCGCTCTCAATG...................................................................................................................................................................................................

0.14

.........................................................................................................................................................CTTGAGCTACAGGTGGATGG..........................................

0.14

..........................................................................................................................................................TCGAGCTACAGGTGGAGGGC.........................................

0.14

....................................TGGGATGGAAAGATGTATGTGT.............................................................................................................................................................

0.14

....................................TGGGTTGGAAAAAGGTATGCGT.............................................................................................................................................................

0.14

0.13

....................................................ATGAGGGGCACAACAAAAGGTAGCA..........................................................................................................................................

0.13

............................................AAAAAGGTATGTGTTGCACAAC.....................................................................................................................................................

0.13

.............................................................................................................................................................AGCTACAGGTGGAGGGCC........................................

0.13

.....................................................TGTGTTGCACAACAAAAGGTAG............................................................................................................................................

0.13

..............................................................................................................................TTGGAAAACAAACATCCGCAAGAA.................................................................

0.13

..........................................................................GCACACTACGATCTTCAACTC........................................................................................................................

0.13

...........................................GAAAAAGGTATGTGTTGAA.........................................................................................................................................................

0.13

............................................AAAAAGGTATGTGTTGCACAACAA...................................................................................................................................................

0.13

..............................................................................................................................TTGGAAAACAAACATCCGCAAGAAG................................................................

0.13

...........................................GAAAAAGGGATGTGTTGCACAA......................................................................................................................................................

0.13

0.11

..............................................................................................................TGGCGGTCTGGGTGGATTGT.....................................................................................

0.07

CGAAACGCCGCGAGAGTTACGGTTAGTTCCTGCGTAACCCAACCTTTTTCCATACACAACGTGTTGTTTTCCATCGTGTGATGATATAAGTTAAGATGTTAAAGTCCAAAACCGCCAAACCCGCCTAACCTTTTGTTTGTAGGCGTTCTTCTTGAGCTCGATGTCCACCTCCCGGGAGGCGAGTCGTTAGCGAACCCCTTAACCTCCTCCTTCAC ****************************************************.............(((((.((...(((..((((((((.....))...))))))..)))...)).)))))******************************************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M042 female body	V111 male body	M021 embryo	V042 embryo	V050 head	V057 head
..............................................................................................................................................................................GGAGGCGAGTCGTTAGCGAAC....................	21	0	1	236.00	236	172	34	0	29	1	0
............................................................................................................................................................................CGGGAGGCGAGTCGTTAGCGAAC....................	23	0	1	161.00	161	120	35	0	4	1	1
.............................................................................................................................................................................GGGAGGCGAGTCGTTAGCGAAC....................	22	0	1	145.00	145	131	13	0	1	0	0
...............................................................................................................................................................................GAGGCGAGTCGTTAGCGAAC....................	20	0	1	68.00	68	61	3	0	4	0	0
...........................TCCTGCGTAACCCAACCTTTTTCCAT..................................................................................................................................................................	26	0	5	56.20	281	275	2	0	2	1	1
..........................................................................CGTGTGATGATATAAGTTAAGATGTT...................................................................................................................	26	0	8	49.63	397	169	74	100	54	0	0
..........................................................................................................................................................................CCCGGGAGGCGAGTCGTTAGCGAAC....................	25	0	1	30.00	30	19	1	10	0	0	0
.............................................................................GTGATGATATAAGTTAAGATGTT...................................................................................................................	23	0	8	28.38	227	195	7	19	6	0	0
..............................................................................................................................................................................GGAGGCGAGTCGTTAGCGAA.....................	20	0	1	28.00	28	26	1	0	1	0	0
............................CCTGCGTAACCCAACCTTTTTCCAT..................................................................................................................................................................	25	0	5	22.80	114	105	4	0	5	0	0
.............................................................................................................................................................................GGGAGGCGAGTCGTTAGCGAA.....................	21	0	1	19.00	19	19	0	0	0	0	0
............................................................................TGTGATGATATAAGTTAAGATGTT...................................................................................................................	24	0	8	18.88	151	35	19	97	0	0	0
...........................................................................GTGTGATGATATAAGTTAAGATGTT...................................................................................................................	25	0	8	15.38	123	67	31	25	0	0	0
...........................................................................................................................................................................CCGGGAGGCGAGTCGTTAGCGAAC....................	24	0	1	15.00	15	13	1	1	0	0	0
.................TACGGTTAGTTCCTGCGTAACCCAACCT..........................................................................................................................................................................	28	0	1	13.00	13	13	0	0	0	0	0
.................................................................................................................GCCAAACCCGCCTAACCTTTTGTTTGT...........................................................................	27	0	1	12.00	12	12	0	0	0	0	0
................................................................................................................................................................................AGGCGAGTCGTTAGCGAAC....................	19	0	1	11.00	11	9	1	0	1	0	0
..........CGAGAGTTACGGTTAGTTCCTGCGT....................................................................................................................................................................................	25	0	1	10.00	10	6	3	0	1	0	0
.................................................................................................................................................................................GGCGAGTCGTTAGCGAAC....................	18	0	1	9.00	9	9	0	0	0	0	0
............................................................................................................................................................................CGGGAGGCGAGTCGTTAGCGAA.....................	22	0	1	8.00	8	8	0	0	0	0	0
.............................CTGCGTAACCCAACCTTTTTCCAT..................................................................................................................................................................	24	0	5	8.00	40	34	4	0	2	0	0
................................................................................................................CGCCAAACCCGCCTAACCTTTTGTTTGT...........................................................................	28	0	1	8.00	8	8	0	0	0	0	0
..........................................................................CGTGTGATGATATAAGTTAAGATGT....................................................................................................................	25	0	8	7.13	57	36	12	0	9	0	0
..................................................................................................................................................TCTTCTTGAGCTCGATGTCCACCT.............................................	24	0	1	7.00	7	2	0	5	0	0	0
..............................................................................................................................................................................AAAGGCGAGTCGTTAGCGAAC....................	21	2	1	7.00	7	7	0	0	0	0	0
..........................................................................................................................................GTAGGCGTTCTTCTTGAGCTCGATGT...................................................	26	0	1	7.00	7	7	0	0	0	0	0
...................................................................................................................................................................................CGAGTCGTTAGCGAACCCCTTAACCT..........	26	0	6	6.83	41	36	0	0	3	1	1
.........................................................................TCGTGTGATGATATAAGTTAAGATGTT...................................................................................................................	27	0	8	6.50	52	12	1	39	0	0	0
...............................................................................................................................................................................GAGGCGAGTCGTTAGCGAA.....................	19	0	1	5.00	5	5	0	0	0	0	0
.............................................................................................................................................................................TGGAGGCGAGTCGTTAGCGAAC....................	22	1	1	5.00	5	5	0	0	0	0	0
..............................................................................................................................................................................GGAGGCGAGTCGGTAGCGAAC....................	21	1	1	5.00	5	5	0	0	0	0	0
.................TACGGTTAGTTCCTGCGTAACCCAAC............................................................................................................................................................................	26	0	1	5.00	5	5	0	0	0	0	0
.............................................................................................................................................................................GGGAGGCGAGTCGGTAGCGAAC....................	22	1	1	5.00	5	5	0	0	0	0	0
.........................GTTCCTGCGTAACCCAACCTTTTTCCAT..................................................................................................................................................................	28	0	5	4.40	22	21	0	0	1	0	0
..........................TTCCTGCGTAACCCAACCTTTTTCCAT..................................................................................................................................................................	27	0	5	4.20	21	21	0	0	0	0	0
.............................................................................GTGATGATATAAGTTAAGATGTTAA.................................................................................................................	25	0	8	4.13	33	28	0	4	1	0	0
................................................................................................................................................GTTCTTCTTGAGCTCGATGTCCACCT.............................................	26	0	1	4.00	4	3	0	1	0	0	0
........................................................................................................................................TTGTAGGCGTTCTTCTTGAGCTCGATG....................................................	27	0	1	4.00	4	4	0	0	0	0	0
................................................................................................................................................GTTCTTCTTGAGCTCGATGT...................................................	20	0	1	4.00	4	1	3	0	0	0	0
........................................................................................................................................TTGTAGGCGTTCTTCTTGAGCTCGAT.....................................................	26	0	1	4.00	4	4	0	0	0	0	0
..............................................................................................................................................................................AGAGGCGAGTCGTTAGCGAAC....................	21	1	1	4.00	4	4	0	0	0	0	0
...............................................................................................................................................................................GAGGCGAGTCGGTAGCGAAC....................	20	1	1	4.00	4	4	0	0	0	0	0
..............................................................................TGATGATATAAGTTAAGATGTT...................................................................................................................	22	0	8	3.38	27	8	1	18	0	0	0
............................................................................................................................CTAACCTTTTGTTTGTAGGCGTTCTTCT...............................................................	28	0	7	3.29	23	22	0	1	0	0	0
..............................................................................TGATGATATAAGTTAAGATGTTAA.................................................................................................................	24	0	8	3.25	26	11	0	15	0	0	0
............................................................................................................................................................................CGGGAGGCGAGTCGATAGCGAAC....................	23	1	1	3.00	3	3	0	0	0	0	0
.................TACGGTTAGTTCCTGCGTAACCCAACCTT.........................................................................................................................................................................	29	0	1	3.00	3	3	0	0	0	0	0
..............................................................................................................................................................................GGAGGCGAGTCGTTAGCGAACCCCT................	25	0	1	3.00	3	3	0	0	0	0	0
.............................................................................................................................................................................GGGAGGCGAGTCGATAGCGAAC....................	22	1	1	3.00	3	3	0	0	0	0	0
...........GAGAGTTACGGTTAGTTCCTGCGT....................................................................................................................................................................................	24	0	1	3.00	3	2	1	0	0	0	0
...........................................................................................................................................TAGGCGTTCTTCTTGAGCTCGATGT...................................................	25	0	1	3.00	3	3	0	0	0	0	0
..............................................................................................................ACCGCCAAACCCGCCTAACCTTTTGT...............................................................................	26	0	1	3.00	3	3	0	0	0	0	0
.........GCGAGAGTTACGGTTAGTTCCTGCGT....................................................................................................................................................................................	26	0	1	3.00	3	3	0	0	0	0	0
.........................................................................................................................................................................TCCCGGGAGGCGAGTCGTTAGCGAAC....................	26	0	1	3.00	3	3	0	0	0	0	0
.................TACGGTTAGTTCCTGCGTAACCCAA.............................................................................................................................................................................	25	0	1	3.00	3	3	0	0	0	0	0
............................................................................................................................................AGGCGTTCTTCTTGAGCTCGATGT...................................................	24	0	1	3.00	3	3	0	0	0	0	0
..........................................................................................................................................................................CCCGGGAGGCGAGTCGTTAGCGAA.....................	24	0	1	3.00	3	3	0	0	0	0	0
..............................................................................................................................................................................GGAGGCGAGTCGATAGCGAAC....................	21	1	1	3.00	3	3	0	0	0	0	0
............AGAGTTACGGTTAGTTCCTGCGT....................................................................................................................................................................................	23	0	1	3.00	3	1	2	0	0	0	0
................................................................................................................CGCCAAACCCGCCTAACCTTTTGT...............................................................................	24	0	1	3.00	3	3	0	0	0	0	0
..................................................................................................................CCAAACCCGCCTAACCTTTTGTTTGT...........................................................................	26	0	1	3.00	3	3	0	0	0	0	0
............................................................................................................................CTAACCTTTTGTTTGTAGGCGTTCT..................................................................	25	0	8	2.88	23	23	0	0	0	0	0
.............................................................................GTGATGATATAAGTTAAGATGT....................................................................................................................	22	0	8	2.63	21	21	0	0	0	0	0
.............................................................................GTGATGATATAAGTTAAGATGTTAAAGT..............................................................................................................	28	0	8	2.50	20	10	9	1	0	0	0
......................................................................................................................................................................................GTCGTTAGCGAACCCCTTAACCTCCT.......	26	0	8	2.50	20	20	0	0	0	0	0
...............................................................................GATGATATAAGTTAAGATGTTAAAGT..............................................................................................................	26	0	8	2.38	19	15	0	4	0	0	0
...........................TCCTGCGTAACCCAACCTTTTTCCA...................................................................................................................................................................	25	0	5	2.20	11	11	0	0	0	0	0
.....................................................................................ATAAGTTAAGATGTTAAAGTCCAAA.........................................................................................................	25	0	5	2.20	11	2	0	9	0	0	0
........................................................................................................................................TTGTAGGCGTTCTTCTTGAGCTCGATGT...................................................	28	0	1	2.00	2	2	0	0	0	0	0
.......CCGCGAGAGTTACGGTTAGTTCCTG.......................................................................................................................................................................................	25	0	1	2.00	2	0	2	0	0	0	0
................................................................................................................TGCCAAACCCGCCTAACCTTTTGTTTGT...........................................................................	28	1	1	2.00	2	2	0	0	0	0	0
..............................................................................................................................AACCTTTTGTTTGTAGGCGTTCTTCT...............................................................	26	0	7	2.00	14	14	0	0	0	0	0
.......CCGCGAGAGTTACGGTTAGTTCCTGCGT....................................................................................................................................................................................	28	0	1	2.00	2	2	0	0	0	0	0
.............................................................................................................................................GGCGTTCTTCTTGAGCTCGATGT...................................................	23	0	1	2.00	2	2	0	0	0	0	0
............................................................................................................................................................................AGGGAGGCGAGTCGTTAGCGAAC....................	23	1	1	2.00	2	2	0	0	0	0	0
...........................................................................................................................................AAGGCGTTCTTCTTGAGCTCGATGT...................................................	25	1	1	2.00	2	2	0	0	0	0	0
...............................................................................................................................................................................TAGGCGAGTCGTTAGCGAAC....................	20	1	1	2.00	2	0	0	2	0	0	0
.............GAGTTACGGTTAGTTCCTGCGTAA..................................................................................................................................................................................	24	0	1	2.00	2	2	0	0	0	0	0
.....................................................................................ATAAGTTAAGATGTTAAAGTCCAAAAC.......................................................................................................	27	0	1	2.00	2	2	0	0	0	0	0
............................................................................GGTGATGATATAAGTTAAGATGTT...................................................................................................................	24	1	8	2.00	16	0	0	16	0	0	0
.............................................................................................................................................................................GGGAGGCGAGTCGTTAGCGA......................	20	0	1	2.00	2	2	0	0	0	0	0
..................................................................................................................................................GCTTCTTGAGCTCGATGTCCACCT.............................................	24	1	1	2.00	2	0	0	2	0	0	0
....................................................................................................................AAACCCGCCTAACCTTTTGTTTGT...........................................................................	24	0	1	2.00	2	2	0	0	0	0	0
CGAAACGCCGCGAGAGTTACGGT................................................................................................................................................................................................	23	0	1	2.00	2	2	0	0	0	0	0
...............................................................................................................................................CGTTCTTCTTGAGCTCGATGTCCACCT.............................................	27	0	1	2.00	2	2	0	0	0	0	0
.................................................................................................................GCCAAACCCGCCTAACCTTTTGT...............................................................................	23	0	1	2.00	2	2	0	0	0	0	0
............................CCTGCGTAACCCAACCGTTTTCCAT..................................................................................................................................................................	25	1	5	2.00	10	10	0	0	0	0	0
..............................................................................................................................................................................GGAGGCGAGTCGCTAGCGAAC....................	21	1	1	2.00	2	2	0	0	0	0	0
...............................................................................................................CCGCCAAACCCGCCTAACCTTTTGT...............................................................................	25	0	1	2.00	2	2	0	0	0	0	0
....................................................................................................AAAGTCCAAAACCGCCAAACCCGCCT.........................................................................................	26	0	1	2.00	2	2	0	0	0	0	0
..........................................................................................................................................GTAGGCGTTCTTCTTGAGCTCGATG....................................................	25	0	1	2.00	2	2	0	0	0	0	0
...............................................................................................................................................CGTTCTTCTTGAGCTCGATGT...................................................	21	0	1	2.00	2	2	0	0	0	0	0
........................................................................................................................................................................CTCCCGGGAGGCGAGTCGTTAGCGAAC....................	27	0	1	2.00	2	0	2	0	0	0	0
...................................................................................................................CAAACCCGCCTAACCTTTTGTTTGT...........................................................................	25	0	1	2.00	2	2	0	0	0	0	0
..............................................................................................................................................................................TGAGGCGAGTCGTTAGCGAAC....................	21	1	1	2.00	2	2	0	0	0	0	0
.............................................................................................................AACCGCCAAACCCGCCTAACCTTTT.................................................................................	25	0	1	2.00	2	2	0	0	0	0	0
...............................................................................................................................................................................AAGGCGAGTCGTTAGCGAAC....................	20	1	1	2.00	2	1	0	0	1	0	0
.................................................................................................................GCCAAACCCGCCTAACCTTTTGTTTG............................................................................	26	0	1	2.00	2	2	0	0	0	0	0
.............................................................................................................AACCGCCAAACCCGCCTAACCTTTTGT...............................................................................	27	0	1	2.00	2	2	0	0	0	0	0
...................................AACCCAACCTTTTTCCATACACAACGTGT.......................................................................................................................................................	29	0	7	1.86	13	13	0	0	0	0	0
...........................TCCTGCGTAACCCAACCGTTTTCCAT..................................................................................................................................................................	26	1	5	1.80	9	9	0	0	0	0	0
...........................TCCTGCGTAACCCAACCTTTTTCCATA.................................................................................................................................................................	27	0	5	1.60	8	8	0	0	0	0	0
...............................................TTCCATACACAACGTGTTGTTTTCCAT.............................................................................................................................................	27	0	8	1.38	11	11	0	0	0	0	0
...........................................................................GTGTGATGATATAAGTTAAGATGT....................................................................................................................	24	0	8	1.38	11	7	3	0	1	0	0
.................................................................................TGATATAAGTTAAGATGTTAAAGT..............................................................................................................	24	0	8	1.25	10	6	0	4	0	0	0
..............................TGCGTAACCCAACCTTTTTCCAT..................................................................................................................................................................	23	0	5	1.20	6	6	0	0	0	0	0
....................GGTTAGTTCCTGCGTAACCCAACCTT.........................................................................................................................................................................	26	0	5	1.20	6	4	0	0	2	0	0
........................AGTTCCTGCGTAACCCAACCTTTTTCCAT..................................................................................................................................................................	29	0	5	1.20	6	6	0	0	0	0	0
.........................................................................TCGTGTGATGATATAAGTTAAGATGT....................................................................................................................	26	0	8	1.13	9	4	4	1	0	0	0
....................................................................................................................................................TTCTTGAGCTCGATGTCCACCT.............................................	22	0	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................TGGGAGGCGAGTCGTTAGCGAA.....................	22	1	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................GCGTTCTTCTTGAGCTCGATGT...................................................	22	0	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................GGAGGCGAGTCGTTAGCGAACCCC.................	24	0	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................CGGTAGGCGAGTCGTTGGCGAAC....................	23	2	1	1.00	1	0	0	0	1	0	0
........................................................................................................................................TTGTAGGCGTTCTTCTTGAGCTCGA......................................................	25	0	1	1.00	1	1	0	0	0	0	0
.......................TAGTTCCTGCGTAACCCAACCTTTTT......................................................................................................................................................................	26	0	5	1.00	5	5	0	0	0	0	0
.................................................................................................................................................TTCTTCTTGAGCTCGATGTCCACCT.............................................	25	0	1	1.00	1	0	0	1	0	0	0
.........................................................................................................CCAAAACCGCCAAACCCGCCTAACCTT...................................................................................	27	0	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................GGAGGCGAGTCGTTATCGAAC....................	21	1	1	1.00	1	0	1	0	0	0	0
..........................................................................................................................................AAAGGCGTTCTTCTTGAGCTCGATGT...................................................	26	2	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................AGGAGGCGAGTCGTTAGCGAAC....................	22	1	1	1.00	1	1	0	0	0	0	0
.................TACGGTTAGTTCCTGCGTAGCCCAACCT..........................................................................................................................................................................	28	1	1	1.00	1	1	0	0	0	0	0
.................TACGGTTAGTTCCTGCGTAACCCA..............................................................................................................................................................................	24	0	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................GGAGGCGAGTCGTTAGCCAGC....................	21	2	1	1.00	1	1	0	0	0	0	0
..................................................................................................................................................................GTCCACCTCCCGGGAGGCGAG................................	21	0	1	1.00	1	1	0	0	0	0	0
...................................................................................................TAAAGTCCAAAACCGCCATACCCGCCT.........................................................................................	27	1	1	1.00	1	1	0	0	0	0	0
.........................................................................................................................................................................TCCCGGGAGGCGAGTCGTTAGCGAACT...................	27	1	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................................................TCCGGGAGGCGAGTCGTTAGCGAAC....................	25	1	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................GGGAGGCGAGTCGTTAGCGACC....................	22	1	1	1.00	1	0	1	0	0	0	0
...........................TCCTGCGTAACCCAACCATTTTCCAT..................................................................................................................................................................	26	1	5	1.00	5	5	0	0	0	0	0
.....................................................................................ATAAGTTAAGATGTTAAAGTCCAAAA........................................................................................................	26	0	1	1.00	1	1	0	0	0	0	0
........................................................................................................................CCACCTAACCTTTTGTTTGTAGGCGT.....................................................................	26	1	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................CGGAGGCGAGTCGGTAGCGAAC....................	22	2	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................CCGGGAGGCGAGTCGGTAGCGAAC....................	24	1	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................................................AGGCGAGTCGTTAGCGAACCCCT................	23	0	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................GGAGGCGAGTCTTTAGCGAA.....................	20	1	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................GTAGGCGTTCTTCTTGAGCTCGAT.....................................................	24	0	1	1.00	1	0	0	1	0	0	0
............................................................................................................................................................................CGGGAGACGAGTCGTTAGCGAAC....................	23	1	1	1.00	1	0	1	0	0	0	0
....TTGCCGCGAGAGTTACGGTTAGT............................................................................................................................................................................................	23	2	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................TGGAGGCGAGTCGTTAGCGAA.....................	21	1	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................................................ACCTCCCGGGAGGCGAGTCGTTAGCG.......................	26	0	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................GGGAGGCGAGTCTTTAGCGAA.....................	21	1	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................TGGGAGGCGCGTCGTTAGCGAAC....................	23	2	1	1.00	1	0	0	0	1	0	0
.....CGCCGCGAGAGTTACGGGTAGTTCCT........................................................................................................................................................................................	26	1	1	1.00	1	1	0	0	0	0	0
...............................................................................................................CCGCCAAACCCGCCTAACCTTTTGTTT.............................................................................	27	0	1	1.00	1	1	0	0	0	0	0
.....CGCCGCGAGAGTTACGGTTAGTTCCT........................................................................................................................................................................................	26	0	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................TGAGGCGAGTCGATAGCGAAC....................	21	2	1	1.00	1	1	0	0	0	0	0
.................................................................................................................................................................................GGCGAGTCGTTAGCGAACCCCTTAACCT..........	28	0	1	1.00	1	1	0	0	0	0	0
........CGCGAGAGTTACGGCTAGTTCCT........................................................................................................................................................................................	23	1	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................CGGAGGCGAGTCGTTAGCGAAC....................	22	1	1	1.00	1	1	0	0	0	0	0
........CGCGAGAGTTACGGTTAGTTCCT........................................................................................................................................................................................	23	0	1	1.00	1	0	1	0	0	0	0
............AGAGTTACGGTTAGTTCCTGCGTAA..................................................................................................................................................................................	25	0	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................GGAGGCGAGTCGTTAGCGA......................	19	0	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................CGGGAGGCGAGTCCTTAGCGAAC....................	23	1	1	1.00	1	1	0	0	0	0	0
.................................................................................................................................................................................GGCGAGTCGTTAGCGAACCCCTTAACC...........	27	0	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................CGGGAGGCGAGTCTTTAGCGAAC....................	23	1	1	1.00	1	1	0	0	0	0	0
.......................................................................................................GTCCAAAACCGCCAAACCCGCCT.........................................................................................	23	0	1	1.00	1	1	0	0	0	0	0
.....................GTTAGTTCCTGCGTAACCCAACCTT.........................................................................................................................................................................	25	0	5	1.00	5	4	0	0	1	0	0
...............................................................................................................................................CGTTCTTCTTGAGCTCGATG....................................................	20	0	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................................................................GAGGCGAGTCGTTAGCGA......................	18	0	1	1.00	1	1	0	0	0	0	0
...............................................................................................................CCGCCAAACCCGCCTAGCCTTTTGT...............................................................................	25	1	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................CCGGGAGGCGAGTCGTTAGCGAA.....................	23	0	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................GGGAGGCGAGTCGTTAGCGAAG....................	22	1	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................TCGGGAGGCGAGTCGTTAGCGAAC....................	24	1	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................GTTTGTAGGCGTTCTTCTTGAGC..........................................................	23	0	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................TGGGAGGCGAGTCGTTAGCGAAC....................	23	1	1	1.00	1	1	0	0	0	0	0
.........................................................................................................................................................................TCTGGGGAGGCGAGTCGTTAGCGAAC....................	26	2	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................................................TTCGGGAGGCGAGTCGTTAGCGAAC....................	25	2	1	1.00	1	1	0	0	0	0	0
...............ATTACGGTTAGTTCCTGCGT....................................................................................................................................................................................	20	1	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................CGGAAGGAGAGTCGTTAGCGAAC....................	23	2	1	1.00	1	0	0	0	1	0	0
................................................................................................................................................GTCCTTCTTGAGCTCGATGTCCACCT.............................................	26	1	1	1.00	1	1	0	0	0	0	0
...............................................................................................................CCGCCAAACCCGCCTAACCTTTTGTTTGT...........................................................................	29	0	1	1.00	1	1	0	0	0	0	0
........CGCGAGAGTTACGGTTAGTTCCTGC......................................................................................................................................................................................	25	0	1	1.00	1	1	0	0	0	0	0
...........................ACCTGCGTAACCCAACCTTTTTCCAT..................................................................................................................................................................	26	1	5	1.00	5	5	0	0	0	0	0
................................................................................................................AGCCAAACCCGCCTAACCTTTTGTTTGT...........................................................................	28	1	1	1.00	1	1	0	0	0	0	0
.........................................................................................................................................................................TCCCGGGAGGCGAGTCGTTAGCGAA.....................	25	0	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................CGGGAGGCGAGTCGTTAGC........................	19	0	1	1.00	1	1	0	0	0	0	0
......GCCGCGAGAGTTACGGTTAGTTCCT........................................................................................................................................................................................	25	0	1	1.00	1	1	0	0	0	0	0
....ACGCCGCGAGAGTTACGGTTAGTTCCT........................................................................................................................................................................................	27	0	1	1.00	1	1	0	0	0	0	0
.................................................................................................................GCCAAACCCTCCTAACCTTTTGTTTGT...........................................................................	27	1	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................TTGTTTGTAGGCGTTCTTCTTGAGC..........................................................	25	0	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................AACCCGCCTAACCTTTTGTTTGT...........................................................................	23	0	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................................................................GAGGCGCGTCGTTAGCGAAC....................	20	1	1	1.00	1	0	0	0	1	0	0
..............................................................................................................................................................................GGAGGCGAGTCGTCAGCGAAC....................	21	1	1	1.00	1	1	0	0	0	0	0
...AACGCCGCGAGAGTTACGGTTAGTTCCT........................................................................................................................................................................................	28	0	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................CGGGAGGCGAGTCGTTAGTGAAC....................	23	1	1	1.00	1	0	1	0	0	0	0
............AGAGTTACGGTTAGTTCCTGCGTAACC................................................................................................................................................................................	27	0	1	1.00	1	1	0	0	0	0	0
CGAAACGCCGCGAGAGTTACGGTT...............................................................................................................................................................................................	24	0	1	1.00	1	1	0	0	0	0	0
.......................................................................................................................CCCGCCTAACCTTTTGTTTGTAG.........................................................................	23	0	1	1.00	1	1	0	0	0	0	0
..........CGAGAGTTACGGTTAGTTCCTGCGTT...................................................................................................................................................................................	26	1	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................................................................GAGGCGAGTCGATAGCGAAC....................	20	1	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................CGGGAGGCGAGTCGTTATCGAAC....................	23	1	1	1.00	1	0	1	0	0	0	0
............................................................................................................................................................................TTGGAGGCGAGTCGTTAGCGAAC....................	23	2	1	1.00	1	1	0	0	0	0	0
..............................................................................................................ACCGCCAAACCCGCCTAACCTTTTG................................................................................	25	0	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................AGAGGCGAGTCGATAGCGAAC....................	21	2	1	1.00	1	1	0	0	0	0	0
..........AGAGAGTTACGGTTAGTTCCTGCT.....................................................................................................................................................................................	24	2	1	1.00	1	1	0	0	0	0	0
........CGCGAGAGTTACGGTTAGTTCCTGCGT....................................................................................................................................................................................	27	0	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................TTTGTTTGTAGGCGTTCTTCTTGAGC..........................................................	26	0	1	1.00	1	1	0	0	0	0	0
..................................................................................................................CCAAACCCGCCTAACCTTTTGTTTGTA..........................................................................	27	0	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................GGGAGGCGAGTCGTTAGCGAACCC..................	24	0	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................................................CCCGGGAGGCGAGTCGCTAGCGAAC....................	25	1	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................GGGAGGCGAGTCGCTAGCGAAC....................	22	1	1	1.00	1	1	0	0	0	0	0
.GAAACGCCGCGAGAGTTATGGT................................................................................................................................................................................................	22	1	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................................................AGGCGAGTCGTTAGCGAA.....................	18	0	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................GGGAGGCGAGTCGTTAACGAACCCC.................	25	1	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................GGAGGCCAGTCGTTAGCGAAC....................	21	1	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................................CTTCTTGAGCTCGATGTCCACCTC............................................	24	0	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................CTGGAGGCGAGTCGATAGCGAAC....................	23	2	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................ATTGGAGGCGAGTCGTTAGCGAAC....................	24	3	1	1.00	1	1	0	0	0	0	0
...........................................CTTTTTCCATACACAACGTGTTGTT...................................................................................................................................................	25	0	8	1.00	8	8	0	0	0	0	0
............................................................................................................................................................................CGGGAGGCGAGTCGGTAGCGAAC....................	23	1	1	1.00	1	1	0	0	0	0	0
............................CCTGCGTAACCCAACCTTTTTCCATA.................................................................................................................................................................	26	0	5	1.00	5	5	0	0	0	0	0
......................TTAGTTCCTGCGTAACCCAACCTTT........................................................................................................................................................................	25	0	5	0.80	4	4	0	0	0	0	0
........................................................................ATCGTGTGATGATATAAGTTAAGATGT....................................................................................................................	27	0	8	0.75	6	3	1	1	1	0	0
...............................................................................GATGATATAAGTTAAGATGTT...................................................................................................................	21	0	8	0.75	6	1	0	5	0	0	0
.............................................................................GTGATGATATAAGTTAAGATGTTA..................................................................................................................	24	0	8	0.75	6	6	0	0	0	0	0
.............................................................................GTGATGATATAAGTGAAGATGTT...................................................................................................................	23	1	8	0.75	6	6	0	0	0	0	0
...................................................................................................................................................................................CGAGTCGTTAGCGAACCCCTTAACCTCCT.......	29	0	6	0.67	4	4	0	0	0	0	0
.............................................TTTTCCATACACAACGTGTTGTTT..................................................................................................................................................	24	0	8	0.63	5	5	0	0	0	0	0
...........................................CTTTTTCCATACACAACGTGTTGTTT..................................................................................................................................................	26	0	8	0.63	5	5	0	0	0	0	0
.............................................................................GTGATGATATAAGTTAAGATGTTAAA................................................................................................................	26	0	8	0.63	5	5	0	0	0	0	0
...............................................................................GATGATATAAGTTAAGATGTTAA.................................................................................................................	23	0	8	0.63	5	5	0	0	0	0	0
...........................TCCTGCGTAACCCAACCTTTT.......................................................................................................................................................................	21	0	5	0.60	3	3	0	0	0	0	0
......................TTAGTTCCTGCGTAACCCAACCTT.........................................................................................................................................................................	24	0	5	0.60	3	1	0	0	2	0	0
.............................CTGCGTAACCCAACCTTTTTCCA...................................................................................................................................................................	23	0	5	0.60	3	3	0	0	0	0	0
.....................GTTAGTTCCTGCGTAACCCAACCT..........................................................................................................................................................................	24	0	5	0.60	3	3	0	0	0	0	0
..........................................CCTTTTTCCATACACAACGTGTTGTTT..................................................................................................................................................	27	0	7	0.57	4	4	0	0	0	0	0
......................................CCAACCTTTTTCCATACACAACGTGT.......................................................................................................................................................	26	0	7	0.57	4	4	0	0	0	0	0
...................................AACCCAACCTTTTTCCATACACAACGT.........................................................................................................................................................	27	0	7	0.57	4	4	0	0	0	0	0
....................................ACCCAACCTTTTTCCATACACAACGTGT.......................................................................................................................................................	28	0	7	0.57	4	4	0	0	0	0	0
.....................................CCCAACCTTTTTCCATACACAACGTGT.......................................................................................................................................................	27	0	7	0.57	4	4	0	0	0	0	0
..............................................................GTTGTTTTCCATCGTGTGATGAT..................................................................................................................................	23	0	9	0.56	5	5	0	0	0	0	0
...........................................................CGTGTTGTTTTCCATCGTGTGATGAT..................................................................................................................................	26	0	9	0.56	5	2	0	0	3	0	0
................................................TCCATACACAACGTGTTGTTTTCCAT.............................................................................................................................................	26	0	8	0.50	4	4	0	0	0	0	0
.............................................................................................................................................CCCCTTCTTCTTGAGCTCGATGT...................................................	23	3	2	0.50	1	0	1	0	0	0	0
........................................................................ATCGTGTGATGATATAAGTTAAGATGTT...................................................................................................................	28	0	8	0.50	4	2	2	0	0	0	0
..........................................................................CGTGTGATGATATAAGTGAAGATGTT...................................................................................................................	26	1	8	0.50	4	4	0	0	0	0	0
...................................................................................................................................................................................CGAGTCGTTAGCGAACCCCTTAACC...........	25	0	6	0.50	3	3	0	0	0	0	0
.......................................................................CATCGTGTGATGATATAAGTTAAGATGT....................................................................................................................	28	0	8	0.50	4	4	0	0	0	0	0
..................................................................................GATATAAGTTAAGATGTTAAAGT..............................................................................................................	23	0	8	0.50	4	4	0	0	0	0	0
..........................................................................CGTGTGATGATATAAGTTAAGATG.....................................................................................................................	24	0	8	0.50	4	3	0	0	1	0	0
..........................................................................CGTGTGATGATATAAGTTAAGAT......................................................................................................................	23	0	8	0.50	4	2	0	0	2	0	0
............................................................................................................................CTAACCTTTTGTTTGTAGGCGTTCTT.................................................................	26	0	8	0.50	4	3	0	1	0	0	0
....................................................................................................................................................................................GAGTCGTTAGCGAACCCCTTAACCTCCT.......	28	0	6	0.50	3	2	0	0	1	0	0
...........................................................................ATGTGATGATATAAGTTAAGATGTT...................................................................................................................	25	1	8	0.50	4	2	1	1	0	0	0
.............................................................................................................................TAACCTTTTGTTTGTAGGCGTTCTTCT...............................................................	27	0	7	0.43	3	3	0	0	0	0	0
.........................................ACCTTTTTCCATACACAACGTGTTGT....................................................................................................................................................	26	0	7	0.43	3	3	0	0	0	0	0
.......................................CAACCTTTTTCCATACACAACGTGTTGT....................................................................................................................................................	28	0	7	0.43	3	3	0	0	0	0	0
........................................AACCTTTTTCCATACACAACGTGTTGTT...................................................................................................................................................	28	0	7	0.43	3	3	0	0	0	0	0
.............................CTGCGTAACCCAACCTTTTTCCATA.................................................................................................................................................................	25	0	5	0.40	2	2	0	0	0	0	0
.............................CTGCGTAACCCAACCATTTTCCAT..................................................................................................................................................................	24	1	5	0.40	2	2	0	0	0	0	0
.........................GTTCCTGCGTAACCCAACCATTTTCCAT..................................................................................................................................................................	28	1	5	0.40	2	2	0	0	0	0	0
..........................TTCCTGCGTAACCCAACCGTTTTCCAT..................................................................................................................................................................	27	1	5	0.40	2	2	0	0	0	0	0
.................................................................................TGATATAAGTTAAGATGTTAAAGTCCA...........................................................................................................	27	0	5	0.40	2	0	0	2	0	0	0
............................CGTGCGTAACCCAACCTTTTTCCAT..................................................................................................................................................................	25	1	5	0.40	2	2	0	0	0	0	0
..............................TGCGTAACCCAACCTTTTTCCA...................................................................................................................................................................	22	0	5	0.40	2	2	0	0	0	0	0
.....................................................................................ATAAGTTAAGATGTTAAAGTCCAA..........................................................................................................	24	0	5	0.40	2	0	0	2	0	0	0
...................CGGTTAGTTCCTGCGTAACCCAACCT..........................................................................................................................................................................	26	0	5	0.40	2	1	0	0	1	0	0
.......................TAGTTCCTGCGTAACCCAACCTTT........................................................................................................................................................................	24	0	5	0.40	2	2	0	0	0	0	0
............................CCTGCGTAACCCAACCTTTTTCCATT.................................................................................................................................................................	26	1	5	0.40	2	2	0	0	0	0	0
............................CCTGCGTAACCCAACCTTTTTCCA...................................................................................................................................................................	24	0	5	0.40	2	2	0	0	0	0	0
.........................GGTCCTGCGTAACCCAACCTTTTTCCAT..................................................................................................................................................................	28	1	5	0.40	2	2	0	0	0	0	0
.........................GTTCCTGCGTAACCCAACCTTTTT......................................................................................................................................................................	24	0	5	0.40	2	1	0	0	1	0	0
............................CCTGCGTAACCCAACCTTTTTC.....................................................................................................................................................................	22	0	5	0.40	2	2	0	0	0	0	0
...........................TCCTGCGTAACCCAACCTTTTTCCAA..................................................................................................................................................................	26	1	5	0.40	2	2	0	0	0	0	0
.................................................CCATACACAACGTGTTGTTTTCCAT.............................................................................................................................................	25	0	8	0.38	3	3	0	0	0	0	0
..............................................................................TGATGATATAAGTTAAGATCTTAA.................................................................................................................	24	1	8	0.38	3	0	0	3	0	0	0
............................................................................................................................CTAACCTTTTGTTTGTAGGCGTTC...................................................................	24	0	8	0.38	3	3	0	0	0	0	0
..............................................................................TGATGATATAAGTTAAGATGTTAAAGT..............................................................................................................	27	0	8	0.38	3	1	1	1	0	0	0
......................................................................................................................................................................................GTCGTTAGCGAACCCCTTAACCTCC........	25	0	8	0.38	3	3	0	0	0	0	0
.................................................................................TGATATAAGTTAAGATGTTAAAG...............................................................................................................	23	0	8	0.38	3	0	1	2	0	0	0
.......................................................................CATCGTGTGATGATATAAGTTAAGATGTT...................................................................................................................	29	0	8	0.38	3	0	1	2	0	0	0
.....................................................................TCCATCGTGTGATGATATAAGTTAAGAT......................................................................................................................	28	0	8	0.38	3	3	0	0	0	0	0
..........................................................................TGTGTGATGATATAAGTTAAGATGTT...................................................................................................................	26	1	8	0.38	3	0	0	3	0	0	0
........................................................................ATCGTGTGATGATATAAGTTAAGATG.....................................................................................................................	26	0	8	0.38	3	0	0	3	0	0	0
..............................................................................AGATGATATAAGTTAAGATGTTAAAGT..............................................................................................................	27	1	8	0.38	3	2	0	1	0	0	0
..........................................................................CGTGTGATGATATAAGTTAAGATT.....................................................................................................................	24	1	8	0.38	3	1	1	1	0	0	0
.............................................................................GTGATGATATAAGTAAAGATGTT...................................................................................................................	23	1	8	0.38	3	3	0	0	0	0	0
...............................................................................GATGATATAAGTTAAGATGTTAAAG...............................................................................................................	25	0	8	0.38	3	3	0	0	0	0	0
...........................................CTTTTTCCATACACAACGTGTTGT....................................................................................................................................................	24	0	8	0.38	3	3	0	0	0	0	0
...........................................................................GTGTGATGATATAAGTGAAGATGTT...................................................................................................................	25	1	8	0.38	3	3	0	0	0	0	0
............................................................GTGTTGTTTTCCATCGTGTGATGAT..................................................................................................................................	25	0	9	0.33	3	3	0	0	0	0	0
..................................................................................................................................................................................GCGAGTCGTTAGCGAACCCCTTAACCT..........	27	0	6	0.33	2	2	0	0	0	0	0
.....................GTTAGTTCCTGCGTAACCCAA.............................................................................................................................................................................	21	0	6	0.33	2	2	0	0	0	0	0
.............................................................................................................................................................................AGGAGGCGAGTCGTTAGC........................	18	1	3	0.33	1	1	0	0	0	0	0
....................GGTTAGTTCCTGCGTAACCC...............................................................................................................................................................................	20	0	6	0.33	2	1	0	0	1	0	0
.....................................CCCAACCTTTTTCCATACACAACGTG........................................................................................................................................................	26	0	7	0.29	2	2	0	0	0	0	0
.......................................AAACCTTTTTCCATACACAACGTGTTGT....................................................................................................................................................	28	1	7	0.29	2	2	0	0	0	0	0
..........................................CCTTTTTCCATACACAACGTGTTGT....................................................................................................................................................	25	0	7	0.29	2	2	0	0	0	0	0
.....................................CCCAACCTTTTTCCATACACAACGT.........................................................................................................................................................	25	0	7	0.29	2	0	0	2	0	0	0
........................................AACCTTTTTCCATACACAACGTGTTGTTT..................................................................................................................................................	29	0	7	0.29	2	2	0	0	0	0	0
..........................................CCTTTTTCCATACACAACGTGTTGTT...................................................................................................................................................	26	0	7	0.29	2	2	0	0	0	0	0
............................................................................TGTGATGATATAAGTTAAGATGTTAA.................................................................................................................	26	0	8	0.25	2	2	0	0	0	0	0
........................................................................................................................................................................................CGTTAGCGAACCCCTTAACCTCCT.......	24	0	8	0.25	2	2	0	0	0	0	0
.........................................................................................................................................................................................GTTAGCGAACCCCTTAACCTCCT.......	23	0	8	0.25	2	1	0	1	0	0	0
...........................................................................GTGTGATGATATAAGTTAAGATGTTA..................................................................................................................	26	0	8	0.25	2	0	2	0	0	0	0
..........................................................................CGTGTGATGATATAAGTTAAGATGTTAA.................................................................................................................	28	0	8	0.25	2	0	1	0	1	0	0
..............................................................................................................................AACCTTTTGTTTGTAGGCGTTCT..................................................................	23	0	8	0.25	2	1	1	0	0	0	0
..........................................................................AGTGTGATGATATAAGTTAAGATGTT...................................................................................................................	26	1	8	0.25	2	1	0	0	1	0	0
..........................................................................GGTGTGATGATATAAGTTAAGATGTT...................................................................................................................	26	1	8	0.25	2	0	0	2	0	0	0
.....................................................ACACAACGTGTTGTTTTCCATCGTGT........................................................................................................................................	26	0	8	0.25	2	2	0	0	0	0	0

CGAAACGCCGCGAGAGTTACGGTTAGTTCCTGCGTAACCCAACCTTTTTCCATACACAACGTGTTGTTTTCCATCGTGTGATGATATAAGTTAAGATGTTAAAGTCCAAAACCGCCAAACCCGCCTAACCTTTTGTTTGTAGGCGTTCTTCTTGAGCTCGATGTCCACCTCCCGGGAGGCGAGTCGTTAGCGAACCCCTTAACCTCCTCCTTCAC
******************************************************.............(((((.((...(((..((((((((.....))...))))))..)))...)).)))))********************************************************************************************

Read size

# Mismatch

Hit Count

Total Norm

Total

M042
female body

V111
male body

M021
embryo

V042
embryo

V050
head

V057
head

236.00

236

172

161.00

161

120

145.00

145

131

68.00

...........................TCCTGCGTAACCCAACCTTTTTCCAT..................................................................................................................................................................

56.20

281

275

..........................................................................CGTGTGATGATATAAGTTAAGATGTT...................................................................................................................

49.63

397

169

100

30.00

.............................................................................GTGATGATATAAGTTAAGATGTT...................................................................................................................

28.38

227

195

28.00

............................CCTGCGTAACCCAACCTTTTTCCAT..................................................................................................................................................................

22.80

114

105

19.00

............................................................................TGTGATGATATAAGTTAAGATGTT...................................................................................................................

18.88

151

...........................................................................GTGTGATGATATAAGTTAAGATGTT...................................................................................................................

15.38

123

15.00

.................TACGGTTAGTTCCTGCGTAACCCAACCT..........................................................................................................................................................................

13.00

.................................................................................................................GCCAAACCCGCCTAACCTTTTGTTTGT...........................................................................

12.00

11.00

..........CGAGAGTTACGGTTAGTTCCTGCGT....................................................................................................................................................................................

10.00

9.00

8.00

.............................CTGCGTAACCCAACCTTTTTCCAT..................................................................................................................................................................

8.00

................................................................................................................CGCCAAACCCGCCTAACCTTTTGTTTGT...........................................................................

8.00

..........................................................................CGTGTGATGATATAAGTTAAGATGT....................................................................................................................

7.13

..................................................................................................................................................TCTTCTTGAGCTCGATGTCCACCT.............................................

7.00

..........................................................................................................................................GTAGGCGTTCTTCTTGAGCTCGATGT...................................................

7.00

6.83

.........................................................................TCGTGTGATGATATAAGTTAAGATGTT...................................................................................................................

6.50

5.00

.................TACGGTTAGTTCCTGCGTAACCCAAC............................................................................................................................................................................

5.00

.........................GTTCCTGCGTAACCCAACCTTTTTCCAT..................................................................................................................................................................

4.40

..........................TTCCTGCGTAACCCAACCTTTTTCCAT..................................................................................................................................................................

4.20

.............................................................................GTGATGATATAAGTTAAGATGTTAA.................................................................................................................

4.13

................................................................................................................................................GTTCTTCTTGAGCTCGATGTCCACCT.............................................

4.00

........................................................................................................................................TTGTAGGCGTTCTTCTTGAGCTCGATG....................................................

4.00

................................................................................................................................................GTTCTTCTTGAGCTCGATGT...................................................

4.00

........................................................................................................................................TTGTAGGCGTTCTTCTTGAGCTCGAT.....................................................

4.00

..............................................................................TGATGATATAAGTTAAGATGTT...................................................................................................................

3.38

............................................................................................................................CTAACCTTTTGTTTGTAGGCGTTCTTCT...............................................................

3.29

..............................................................................TGATGATATAAGTTAAGATGTTAA.................................................................................................................

3.25

3.00

.................TACGGTTAGTTCCTGCGTAACCCAACCTT.........................................................................................................................................................................

3.00

...........GAGAGTTACGGTTAGTTCCTGCGT....................................................................................................................................................................................

3.00

...........................................................................................................................................TAGGCGTTCTTCTTGAGCTCGATGT...................................................

3.00

..............................................................................................................ACCGCCAAACCCGCCTAACCTTTTGT...............................................................................

3.00

.........GCGAGAGTTACGGTTAGTTCCTGCGT....................................................................................................................................................................................

3.00

.................TACGGTTAGTTCCTGCGTAACCCAA.............................................................................................................................................................................

3.00

............................................................................................................................................AGGCGTTCTTCTTGAGCTCGATGT...................................................

3.00

............AGAGTTACGGTTAGTTCCTGCGT....................................................................................................................................................................................

3.00

................................................................................................................CGCCAAACCCGCCTAACCTTTTGT...............................................................................

3.00

..................................................................................................................CCAAACCCGCCTAACCTTTTGTTTGT...........................................................................

3.00

............................................................................................................................CTAACCTTTTGTTTGTAGGCGTTCT..................................................................

2.88

.............................................................................GTGATGATATAAGTTAAGATGT....................................................................................................................

2.63

.............................................................................GTGATGATATAAGTTAAGATGTTAAAGT..............................................................................................................

2.50

...............................................................................GATGATATAAGTTAAGATGTTAAAGT..............................................................................................................

2.38

...........................TCCTGCGTAACCCAACCTTTTTCCA...................................................................................................................................................................

2.20

.....................................................................................ATAAGTTAAGATGTTAAAGTCCAAA.........................................................................................................

2.20

........................................................................................................................................TTGTAGGCGTTCTTCTTGAGCTCGATGT...................................................

2.00

.......CCGCGAGAGTTACGGTTAGTTCCTG.......................................................................................................................................................................................

2.00

................................................................................................................TGCCAAACCCGCCTAACCTTTTGTTTGT...........................................................................

2.00

..............................................................................................................................AACCTTTTGTTTGTAGGCGTTCTTCT...............................................................

2.00

.......CCGCGAGAGTTACGGTTAGTTCCTGCGT....................................................................................................................................................................................

2.00

.............................................................................................................................................GGCGTTCTTCTTGAGCTCGATGT...................................................

2.00

...........................................................................................................................................AAGGCGTTCTTCTTGAGCTCGATGT...................................................

2.00

.............GAGTTACGGTTAGTTCCTGCGTAA..................................................................................................................................................................................

2.00

.....................................................................................ATAAGTTAAGATGTTAAAGTCCAAAAC.......................................................................................................

2.00

............................................................................GGTGATGATATAAGTTAAGATGTT...................................................................................................................

2.00

..................................................................................................................................................GCTTCTTGAGCTCGATGTCCACCT.............................................

2.00

....................................................................................................................AAACCCGCCTAACCTTTTGTTTGT...........................................................................

2.00

CGAAACGCCGCGAGAGTTACGGT................................................................................................................................................................................................

2.00

...............................................................................................................................................CGTTCTTCTTGAGCTCGATGTCCACCT.............................................

2.00

.................................................................................................................GCCAAACCCGCCTAACCTTTTGT...............................................................................

2.00

............................CCTGCGTAACCCAACCGTTTTCCAT..................................................................................................................................................................

2.00

...............................................................................................................CCGCCAAACCCGCCTAACCTTTTGT...............................................................................

2.00

....................................................................................................AAAGTCCAAAACCGCCAAACCCGCCT.........................................................................................

2.00

..........................................................................................................................................GTAGGCGTTCTTCTTGAGCTCGATG....................................................

2.00

...............................................................................................................................................CGTTCTTCTTGAGCTCGATGT...................................................

2.00

...................................................................................................................CAAACCCGCCTAACCTTTTGTTTGT...........................................................................

2.00

.............................................................................................................AACCGCCAAACCCGCCTAACCTTTT.................................................................................

2.00

.................................................................................................................GCCAAACCCGCCTAACCTTTTGTTTG............................................................................

2.00

.............................................................................................................AACCGCCAAACCCGCCTAACCTTTTGT...............................................................................

2.00

...................................AACCCAACCTTTTTCCATACACAACGTGT.......................................................................................................................................................

1.86

...........................TCCTGCGTAACCCAACCGTTTTCCAT..................................................................................................................................................................

1.80

...........................TCCTGCGTAACCCAACCTTTTTCCATA.................................................................................................................................................................

1.60

...............................................TTCCATACACAACGTGTTGTTTTCCAT.............................................................................................................................................

1.38

...........................................................................GTGTGATGATATAAGTTAAGATGT....................................................................................................................

1.38

.................................................................................TGATATAAGTTAAGATGTTAAAGT..............................................................................................................

1.25

..............................TGCGTAACCCAACCTTTTTCCAT..................................................................................................................................................................

1.20

....................GGTTAGTTCCTGCGTAACCCAACCTT.........................................................................................................................................................................

1.20

........................AGTTCCTGCGTAACCCAACCTTTTTCCAT..................................................................................................................................................................

1.20

.........................................................................TCGTGTGATGATATAAGTTAAGATGT....................................................................................................................

1.13

....................................................................................................................................................TTCTTGAGCTCGATGTCCACCT.............................................

1.00

..............................................................................................................................................GCGTTCTTCTTGAGCTCGATGT...................................................

1.00

........................................................................................................................................TTGTAGGCGTTCTTCTTGAGCTCGA......................................................

1.00

.......................TAGTTCCTGCGTAACCCAACCTTTTT......................................................................................................................................................................

1.00

.................................................................................................................................................TTCTTCTTGAGCTCGATGTCCACCT.............................................

1.00

.........................................................................................................CCAAAACCGCCAAACCCGCCTAACCTT...................................................................................

1.00

..........................................................................................................................................AAAGGCGTTCTTCTTGAGCTCGATGT...................................................

1.00

.................TACGGTTAGTTCCTGCGTAGCCCAACCT..........................................................................................................................................................................

1.00

.................TACGGTTAGTTCCTGCGTAACCCA..............................................................................................................................................................................

1.00

..................................................................................................................................................................GTCCACCTCCCGGGAGGCGAG................................

1.00

...................................................................................................TAAAGTCCAAAACCGCCATACCCGCCT.........................................................................................

1.00

...........................TCCTGCGTAACCCAACCATTTTCCAT..................................................................................................................................................................

1.00

.....................................................................................ATAAGTTAAGATGTTAAAGTCCAAAA........................................................................................................

1.00

........................................................................................................................CCACCTAACCTTTTGTTTGTAGGCGT.....................................................................

1.00

..........................................................................................................................................GTAGGCGTTCTTCTTGAGCTCGAT.....................................................

1.00

....TTGCCGCGAGAGTTACGGTTAGT............................................................................................................................................................................................

1.00

.....CGCCGCGAGAGTTACGGGTAGTTCCT........................................................................................................................................................................................

1.00

...............................................................................................................CCGCCAAACCCGCCTAACCTTTTGTTT.............................................................................

1.00

.....CGCCGCGAGAGTTACGGTTAGTTCCT........................................................................................................................................................................................

1.00

........CGCGAGAGTTACGGCTAGTTCCT........................................................................................................................................................................................

1.00

........CGCGAGAGTTACGGTTAGTTCCT........................................................................................................................................................................................

1.00

............AGAGTTACGGTTAGTTCCTGCGTAA..................................................................................................................................................................................

1.00

.......................................................................................................GTCCAAAACCGCCAAACCCGCCT.........................................................................................

1.00

.....................GTTAGTTCCTGCGTAACCCAACCTT.........................................................................................................................................................................

1.00

...............................................................................................................................................CGTTCTTCTTGAGCTCGATG....................................................

1.00

...............................................................................................................CCGCCAAACCCGCCTAGCCTTTTGT...............................................................................

1.00

......................................................................................................................................GTTTGTAGGCGTTCTTCTTGAGC..........................................................

1.00

...............ATTACGGTTAGTTCCTGCGT....................................................................................................................................................................................

1.00

................................................................................................................................................GTCCTTCTTGAGCTCGATGTCCACCT.............................................

1.00

...............................................................................................................CCGCCAAACCCGCCTAACCTTTTGTTTGT...........................................................................

1.00

........CGCGAGAGTTACGGTTAGTTCCTGC......................................................................................................................................................................................

1.00

...........................ACCTGCGTAACCCAACCTTTTTCCAT..................................................................................................................................................................

1.00

................................................................................................................AGCCAAACCCGCCTAACCTTTTGTTTGT...........................................................................

1.00

......GCCGCGAGAGTTACGGTTAGTTCCT........................................................................................................................................................................................

1.00

....ACGCCGCGAGAGTTACGGTTAGTTCCT........................................................................................................................................................................................

1.00

.................................................................................................................GCCAAACCCTCCTAACCTTTTGTTTGT...........................................................................

1.00

....................................................................................................................................TTGTTTGTAGGCGTTCTTCTTGAGC..........................................................

1.00

.....................................................................................................................AACCCGCCTAACCTTTTGTTTGT...........................................................................

1.00

...AACGCCGCGAGAGTTACGGTTAGTTCCT........................................................................................................................................................................................

1.00

............AGAGTTACGGTTAGTTCCTGCGTAACC................................................................................................................................................................................

1.00

CGAAACGCCGCGAGAGTTACGGTT...............................................................................................................................................................................................

1.00

.......................................................................................................................CCCGCCTAACCTTTTGTTTGTAG.........................................................................

1.00

..........CGAGAGTTACGGTTAGTTCCTGCGTT...................................................................................................................................................................................

1.00

..............................................................................................................ACCGCCAAACCCGCCTAACCTTTTG................................................................................

1.00

..........AGAGAGTTACGGTTAGTTCCTGCT.....................................................................................................................................................................................

1.00

........CGCGAGAGTTACGGTTAGTTCCTGCGT....................................................................................................................................................................................

1.00

...................................................................................................................................TTTGTTTGTAGGCGTTCTTCTTGAGC..........................................................

1.00

..................................................................................................................CCAAACCCGCCTAACCTTTTGTTTGTA..........................................................................

1.00

.GAAACGCCGCGAGAGTTATGGT................................................................................................................................................................................................

1.00

...................................................................................................................................................CTTCTTGAGCTCGATGTCCACCTC............................................

1.00

...........................................CTTTTTCCATACACAACGTGTTGTT...................................................................................................................................................

1.00

............................CCTGCGTAACCCAACCTTTTTCCATA.................................................................................................................................................................

1.00

......................TTAGTTCCTGCGTAACCCAACCTTT........................................................................................................................................................................

0.80

........................................................................ATCGTGTGATGATATAAGTTAAGATGT....................................................................................................................

0.75

...............................................................................GATGATATAAGTTAAGATGTT...................................................................................................................

0.75

.............................................................................GTGATGATATAAGTTAAGATGTTA..................................................................................................................

0.75

.............................................................................GTGATGATATAAGTGAAGATGTT...................................................................................................................

0.75

0.67

.............................................TTTTCCATACACAACGTGTTGTTT..................................................................................................................................................

0.63

...........................................CTTTTTCCATACACAACGTGTTGTTT..................................................................................................................................................

0.63

.............................................................................GTGATGATATAAGTTAAGATGTTAAA................................................................................................................

0.63

...............................................................................GATGATATAAGTTAAGATGTTAA.................................................................................................................

0.63

...........................TCCTGCGTAACCCAACCTTTT.......................................................................................................................................................................

0.60

......................TTAGTTCCTGCGTAACCCAACCTT.........................................................................................................................................................................

0.60

.............................CTGCGTAACCCAACCTTTTTCCA...................................................................................................................................................................

0.60

.....................GTTAGTTCCTGCGTAACCCAACCT..........................................................................................................................................................................

0.60

..........................................CCTTTTTCCATACACAACGTGTTGTTT..................................................................................................................................................

0.57

......................................CCAACCTTTTTCCATACACAACGTGT.......................................................................................................................................................

0.57

...................................AACCCAACCTTTTTCCATACACAACGT.........................................................................................................................................................

0.57

....................................ACCCAACCTTTTTCCATACACAACGTGT.......................................................................................................................................................

0.57

.....................................CCCAACCTTTTTCCATACACAACGTGT.......................................................................................................................................................

0.57

..............................................................GTTGTTTTCCATCGTGTGATGAT..................................................................................................................................

0.56

...........................................................CGTGTTGTTTTCCATCGTGTGATGAT..................................................................................................................................

0.56

................................................TCCATACACAACGTGTTGTTTTCCAT.............................................................................................................................................

0.50

.............................................................................................................................................CCCCTTCTTCTTGAGCTCGATGT...................................................

0.50

........................................................................ATCGTGTGATGATATAAGTTAAGATGTT...................................................................................................................

0.50

..........................................................................CGTGTGATGATATAAGTGAAGATGTT...................................................................................................................

0.50

.......................................................................CATCGTGTGATGATATAAGTTAAGATGT....................................................................................................................

0.50

..................................................................................GATATAAGTTAAGATGTTAAAGT..............................................................................................................

0.50

..........................................................................CGTGTGATGATATAAGTTAAGATG.....................................................................................................................

0.50

..........................................................................CGTGTGATGATATAAGTTAAGAT......................................................................................................................

0.50

............................................................................................................................CTAACCTTTTGTTTGTAGGCGTTCTT.................................................................

0.50

...........................................................................ATGTGATGATATAAGTTAAGATGTT...................................................................................................................

0.50

.............................................................................................................................TAACCTTTTGTTTGTAGGCGTTCTTCT...............................................................

0.43

.........................................ACCTTTTTCCATACACAACGTGTTGT....................................................................................................................................................

0.43

.......................................CAACCTTTTTCCATACACAACGTGTTGT....................................................................................................................................................

0.43

........................................AACCTTTTTCCATACACAACGTGTTGTT...................................................................................................................................................

0.43

.............................CTGCGTAACCCAACCTTTTTCCATA.................................................................................................................................................................

0.40

.............................CTGCGTAACCCAACCATTTTCCAT..................................................................................................................................................................

0.40

.........................GTTCCTGCGTAACCCAACCATTTTCCAT..................................................................................................................................................................

0.40

..........................TTCCTGCGTAACCCAACCGTTTTCCAT..................................................................................................................................................................

0.40

.................................................................................TGATATAAGTTAAGATGTTAAAGTCCA...........................................................................................................

0.40

............................CGTGCGTAACCCAACCTTTTTCCAT..................................................................................................................................................................

0.40

..............................TGCGTAACCCAACCTTTTTCCA...................................................................................................................................................................

0.40

.....................................................................................ATAAGTTAAGATGTTAAAGTCCAA..........................................................................................................

0.40

...................CGGTTAGTTCCTGCGTAACCCAACCT..........................................................................................................................................................................

0.40

.......................TAGTTCCTGCGTAACCCAACCTTT........................................................................................................................................................................

0.40

............................CCTGCGTAACCCAACCTTTTTCCATT.................................................................................................................................................................

0.40

............................CCTGCGTAACCCAACCTTTTTCCA...................................................................................................................................................................

0.40

.........................GGTCCTGCGTAACCCAACCTTTTTCCAT..................................................................................................................................................................

0.40

.........................GTTCCTGCGTAACCCAACCTTTTT......................................................................................................................................................................

0.40

............................CCTGCGTAACCCAACCTTTTTC.....................................................................................................................................................................

0.40

...........................TCCTGCGTAACCCAACCTTTTTCCAA..................................................................................................................................................................

0.40

.................................................CCATACACAACGTGTTGTTTTCCAT.............................................................................................................................................

0.38

..............................................................................TGATGATATAAGTTAAGATCTTAA.................................................................................................................

0.38

............................................................................................................................CTAACCTTTTGTTTGTAGGCGTTC...................................................................

0.38

..............................................................................TGATGATATAAGTTAAGATGTTAAAGT..............................................................................................................

0.38

.................................................................................TGATATAAGTTAAGATGTTAAAG...............................................................................................................

0.38

.......................................................................CATCGTGTGATGATATAAGTTAAGATGTT...................................................................................................................

0.38

.....................................................................TCCATCGTGTGATGATATAAGTTAAGAT......................................................................................................................

0.38

..........................................................................TGTGTGATGATATAAGTTAAGATGTT...................................................................................................................

0.38

........................................................................ATCGTGTGATGATATAAGTTAAGATG.....................................................................................................................

0.38

..............................................................................AGATGATATAAGTTAAGATGTTAAAGT..............................................................................................................

0.38

..........................................................................CGTGTGATGATATAAGTTAAGATT.....................................................................................................................

0.38

.............................................................................GTGATGATATAAGTAAAGATGTT...................................................................................................................

0.38

...............................................................................GATGATATAAGTTAAGATGTTAAAG...............................................................................................................

0.38

...........................................CTTTTTCCATACACAACGTGTTGT....................................................................................................................................................

0.38

...........................................................................GTGTGATGATATAAGTGAAGATGTT...................................................................................................................

0.38

............................................................GTGTTGTTTTCCATCGTGTGATGAT..................................................................................................................................

0.33

.....................GTTAGTTCCTGCGTAACCCAA.............................................................................................................................................................................

0.33

....................GGTTAGTTCCTGCGTAACCC...............................................................................................................................................................................

0.33

.....................................CCCAACCTTTTTCCATACACAACGTG........................................................................................................................................................

0.29

.......................................AAACCTTTTTCCATACACAACGTGTTGT....................................................................................................................................................

0.29

..........................................CCTTTTTCCATACACAACGTGTTGT....................................................................................................................................................

0.29

.....................................CCCAACCTTTTTCCATACACAACGT.........................................................................................................................................................

0.29

........................................AACCTTTTTCCATACACAACGTGTTGTTT..................................................................................................................................................

0.29

..........................................CCTTTTTCCATACACAACGTGTTGTT...................................................................................................................................................

0.29

............................................................................TGTGATGATATAAGTTAAGATGTTAA.................................................................................................................

0.25

...........................................................................GTGTGATGATATAAGTTAAGATGTTA..................................................................................................................

0.25

..........................................................................CGTGTGATGATATAAGTTAAGATGTTAA.................................................................................................................

0.25

..............................................................................................................................AACCTTTTGTTTGTAGGCGTTCT..................................................................

0.25

..........................................................................AGTGTGATGATATAAGTTAAGATGTT...................................................................................................................

0.25

..........................................................................GGTGTGATGATATAAGTTAAGATGTT...................................................................................................................

0.25

.....................................................ACACAACGTGTTGTTTTCCATCGTGT........................................................................................................................................

0.25

Species	Coordinate	ID	Alignment
droPer2	scaffold_326:10942-11156 +	dpe_1484	GCTTTG--CGGCGCTCTCAATG-----------CCAATCAAGGACGCATTGGGTTGGAAAAAGGTATGTGT--TGCACA-------------ACAAAAGGTAGCA-CACTACT---------ATATTCAATTCTACAATTTCAGGTTTTGGCGGTTTGGGCGGATTGGAAAACAAACATCCGCAAGAAGA--------------------ACTCG--AGCTACAGGTGGAGGGCCCTCCGCTCAGCAATCGCTTGGGGAATTGGAGGAGGAAGTG
dp5	Unknown_group_381:9191-9427 +		GCTTTG--CGGCGCTCTCAATGCTGTTGGGCCGCCAATCAAGGACGCATTGGGTTGGAAAAAGGTATGTGT--TGCACA-------------ACAAAAGGTAGCA-CACTACT---------ATATTCAATTCTACAATTTCAG---------GTTTGGGCAGATTGGAAAACAAACATCCGCAAGAAGATGTCGAAAACCAAATCAGAAACTCG--AGCTACAGGTGGAGGGCCCTTCGCTCAGCAATCGCTTGGGGAATTGGAGGAGGAAGTG
droVir3	scaffold_12963:4041407-4041530 +		TT-----------------------------------------------------------------------------------------------------------------------------------------TACAG---------GTCTGGTCGGACTGGAAGATATCCATTAAAAAGAAGCTATTGCAAATTAAAAAGGACTCAGC--TGGCCTTGGAGGCGGCAC---CCAGCATGTGGTCTTAACGCCCGCCGAGGAGACAATT
droBip1	scf7180000394391:32122-32345 +		GCTTGC--CGGTGCATTGAACGCGATTGGCCCTCCAATTAAAGATGTTGCGGGATGGAAAAAGGTATGGGT--ATCCCCAGAATTATGACAAACTAATATAC--------------------ATATTATAATATTACATTCCAG---------GTTTGGTGCG-----AAGGCCAATATTCGGAAGAA-----------ATAAGGCAGAGGTCAG--GGCTACGGGCGGGGGTCCTTACTGCCAGCAACCGCTGACAGCAATGGAGGAGGACGTG
droKik1	scf7180000302708:7684-7916 +		ACTTTG--CAGCGCCTTGAACGACGTTGGCCCTCCGACCAAAGATGTTGGAGGTTGGAAAAGGGTAT------TGTCCA-------------ACAAATATAAGAA-AAGTTGT---------TTATTATAATAATATTTTCCAG---------ATTTGGTGCGATTGGAAGGCGACAATTCGTAAGAAACTTGCCAAAAATAAGGCCGAGATCAG--GGCTAGAGGTGGGGGTCCCTACTCCCAGCTCGCAATAAGCGAAGTGGAGGAGGAGGTT
droFic1	scf7180000453089:2662-2900 +		TCTAAC--AGGCGCGTTGAACGCTGTTGGGCCTCCCATTAAAGACGCTGCAGGGTGGAAGAAGGTATGACTATTAATTA-------------ATATATTAAAGAA-AGCTAAT---------ATATCAAAGAAAAATATTCCAG---------GTTTGGTGCGACTGGAAGGCCAACATACGCAAAAAATTGGCAAAAAACAAGGCTGAGGCCAG--AGCCACTGGCGGTGGTCCTTACTCTCAGCAAGCAATAACGGACGTGGAGGAGGAGGTG
droEle1	scf7180000490104:103395-103643 +		GCTCTGGCAGACAATCTAAACACTGCTGGGCCACCGGTAAAAGATGTCTCCGGATGGAAGAAGGTATATTT--TATTTA-------------GTTAAAATAAATA-ATTTAAACTTTTAAACATACCAAGGTTTCATTTAAAAG---------GCTTGGTGTGACTGGAAAGCCGTCATA-AAAAGAAATCGGCGCACAACCGAAAATAGGCTTCAGCCCCATAGCTGGGGCGTCCTTTAACCAGGTGGCTTTGACCGATATAAAAGCCTCCGTG
droTak1	scf7180000412915:16867-17117 -		ACTAGC--CGCAGAGTTGAACCCAGCAGGACCGCCTGTTAAGGATGTCTCCGGATGGAAGAAGGTTGGCTT--ACATTT---------TCAAACTAATATACATTTCTATAAACTTATTCTCATTCAACTTCATATATTTAAAG---------GCATGGTGCGATTGGAAGGGAGCGATTAAAAAGAAATTGGCTCACAACCGAAAGGAGTCGAC--TGCTACCGGTGGGGGTCCCTTCAACCAGGTGACAGTATCGGATGTGGAGGGATCTGTG
droYak3	v2_chrUn_5189:11617-11835 +		ACTTTA--CAGCCCCTTAAATGGAATTGGCCCTCCAATAAAAGGTGTTTCAGGGTGGAAGAAGGTAGGAT---TATTCA-------------ACAAATATAAGAA-AAGTGAA---------ATATTATAGTAATATATTCCAG---------ATTTGGTGTGATTGGAAGGGATGCATCCGCAAGAAACTTACCAATAATAAGGCGGAGATCAG--GGCTACTGGTG-----------------CTGCCTATAAGTGATGTGGGGGAGAAAATT

Species

Coordinate

Alignment

droPer2

scaffold_326:10942-11156 +

dpe_1484

GCTTTG--CGGCGCTCTCAATG-----------CCAATCAAGGACGCATTGGGTTGGAAAAAGGTATGTGT--TGCACA-------------ACAAAAGGTAGCA-CACTACT---------ATATTCAATTCTACAATTTCAGGTTTTGGCGGTTTGGGCGGATTGGAAAACAAACATCCGCAAGAAGA--------------------ACTCG--AGCTACAGGTGGAGGGCCCTCCGCTCAGCAATCGCTTGGGGAATTGGAGGAGGAAGTG

dp5

Unknown_group_381:9191-9427 +

GCTTTG--CGGCGCTCTCAATGCTGTTGGGCCGCCAATCAAGGACGCATTGGGTTGGAAAAAGGTATGTGT--TGCACA-------------ACAAAAGGTAGCA-CACTACT---------ATATTCAATTCTACAATTTCAG---------GTTTGGGCAGATTGGAAAACAAACATCCGCAAGAAGATGTCGAAAACCAAATCAGAAACTCG--AGCTACAGGTGGAGGGCCCTTCGCTCAGCAATCGCTTGGGGAATTGGAGGAGGAAGTG

droVir3

scaffold_12963:4041407-4041530 +

TT-----------------------------------------------------------------------------------------------------------------------------------------TACAG---------GTCTGGTCGGACTGGAAGATATCCATTAAAAAGAAGCTATTGCAAATTAAAAAGGACTCAGC--TGGCCTTGGAGGCGGCAC---CCAGCATGTGGTCTTAACGCCCGCCGAGGAGACAATT

droBip1

scf7180000394391:32122-32345 +

GCTTGC--CGGTGCATTGAACGCGATTGGCCCTCCAATTAAAGATGTTGCGGGATGGAAAAAGGTATGGGT--ATCCCCAGAATTATGACAAACTAATATAC--------------------ATATTATAATATTACATTCCAG---------GTTTGGTGCG-----AAGGCCAATATTCGGAAGAA-----------ATAAGGCAGAGGTCAG--GGCTACGGGCGGGGGTCCTTACTGCCAGCAACCGCTGACAGCAATGGAGGAGGACGTG

droKik1

scf7180000302708:7684-7916 +

ACTTTG--CAGCGCCTTGAACGACGTTGGCCCTCCGACCAAAGATGTTGGAGGTTGGAAAAGGGTAT------TGTCCA-------------ACAAATATAAGAA-AAGTTGT---------TTATTATAATAATATTTTCCAG---------ATTTGGTGCGATTGGAAGGCGACAATTCGTAAGAAACTTGCCAAAAATAAGGCCGAGATCAG--GGCTAGAGGTGGGGGTCCCTACTCCCAGCTCGCAATAAGCGAAGTGGAGGAGGAGGTT

droFic1

scf7180000453089:2662-2900 +

TCTAAC--AGGCGCGTTGAACGCTGTTGGGCCTCCCATTAAAGACGCTGCAGGGTGGAAGAAGGTATGACTATTAATTA-------------ATATATTAAAGAA-AGCTAAT---------ATATCAAAGAAAAATATTCCAG---------GTTTGGTGCGACTGGAAGGCCAACATACGCAAAAAATTGGCAAAAAACAAGGCTGAGGCCAG--AGCCACTGGCGGTGGTCCTTACTCTCAGCAAGCAATAACGGACGTGGAGGAGGAGGTG

droEle1

scf7180000490104:103395-103643 +

GCTCTGGCAGACAATCTAAACACTGCTGGGCCACCGGTAAAAGATGTCTCCGGATGGAAGAAGGTATATTT--TATTTA-------------GTTAAAATAAATA-ATTTAAACTTTTAAACATACCAAGGTTTCATTTAAAAG---------GCTTGGTGTGACTGGAAAGCCGTCATA-AAAAGAAATCGGCGCACAACCGAAAATAGGCTTCAGCCCCATAGCTGGGGCGTCCTTTAACCAGGTGGCTTTGACCGATATAAAAGCCTCCGTG

droTak1

scf7180000412915:16867-17117 -

ACTAGC--CGCAGAGTTGAACCCAGCAGGACCGCCTGTTAAGGATGTCTCCGGATGGAAGAAGGTTGGCTT--ACATTT---------TCAAACTAATATACATTTCTATAAACTTATTCTCATTCAACTTCATATATTTAAAG---------GCATGGTGCGATTGGAAGGGAGCGATTAAAAAGAAATTGGCTCACAACCGAAAGGAGTCGAC--TGCTACCGGTGGGGGTCCCTTCAACCAGGTGACAGTATCGGATGTGGAGGGATCTGTG

droYak3

v2_chrUn_5189:11617-11835 +

ACTTTA--CAGCCCCTTAAATGGAATTGGCCCTCCAATAAAAGGTGTTTCAGGGTGGAAGAAGGTAGGAT---TATTCA-------------ACAAATATAAGAA-AAGTGAA---------ATATTATAGTAATATATTCCAG---------ATTTGGTGTGATTGGAAGGGATGCATCCGCAAGAAACTTACCAATAATAAGGCGGAGATCAG--GGCTACTGGTG-----------------CTGCCTATAAGTGATGTGGGGGAGAAAATT

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droPer2

GCTTTG--CGGCGCTCTCAATG-----------CCAATCAAGGACGCATTGGGTTGGAAAAAGGTATGTGT--TGCACA-------------ACAAAAGGTAGCA-CACTACT---------ATATTCAATTCTACAATTTCAGGTTTTGGCGGTTTGGGCGGATTGGAAAACAAACATCCGCAAGAAGA--------------------ACTCG--AGCTACAGGTGGAGGGCCCTCCGCTCAGCAATCGCTTGGGGAATTGGAGGAGGAAGTG	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
..................................................................................................................................TTCTACAATTTCAGGTTTTGGCGGTT.......................................................................................................................	26	1	11.00	11	0	11	0	0	0	0
..................................................................................................................................TTCTACAATTTCAGGTTTTGGCGG.........................................................................................................................	24	1	9.00	9	0	8	1	0	0	0
..................................................................................................................................TTCTACAATTTCAGGTTTTGGCGGT........................................................................................................................	25	1	6.00	6	0	6	0	0	0	0
.....................................................................................................................................................................................................................................................CAATCGCTTGGGGAATTGGAGG........	22	8	5.88	47	0	15	0	0	0	32
................................................................................................................................AATTCTACAATTTCAGGTTTTGG............................................................................................................................	23	1	5.00	5	0	5	0	0	0	0
..................................................................................................................................TTCTACAATTTCAGGTTTTGGC...........................................................................................................................	22	1	4.00	4	0	4	0	0	0	0
.....................................................................................................................................................................................................................................................CAATCGCTTGGGGAATTGGAGGA.......	23	8	3.25	26	0	4	0	0	0	22
.....................................................................................................................................................................................................................................................CAATCGCTTGGGGAATTGGAGGAG......	24	8	2.75	22	0	18	0	0	0	4
.....................................................................................................................................................................................................................................................CAATCGCTTGGGGAATTGGAG.........	21	8	2.38	19	0	6	0	0	0	13
................................................................................................................................AATTCTACAATTTCAGGTTTTGGCGG.........................................................................................................................	26	1	2.00	2	0	2	0	0	0	0
.................................................................................................................................................................................ATCCGCAAGAAGA--------------------ACTCG--AGCT......................................................	22	1	2.00	2	2	0	0	0	0	0
..................................................................................................................................TTCTACAATTTCAGGTTTTGGCG..........................................................................................................................	23	1	2.00	2	0	2	0	0	0	0
........................................................................................................................................................................AAAACAAACATCCGCAAGAAGA--------------------ACT..............................................................	25	1	2.00	2	0	2	0	0	0	0
........................................................................................................................................................................AAAACAAACATCCGCAAGAAGA--------------------AC...............................................................	24	1	2.00	2	0	2	0	0	0	0
........................................................................................................................................................................AAAACAAACATCCGCAAGAAGA--------------------ACTCG--..........................................................	27	1	2.00	2	0	2	0	0	0	0
.....................................................................................................................................................................................................................................................CAATCGCTTGGGGAATTGGA..........	20	8	1.13	9	0	1	0	0	0	8
....TG--CGGCGCTCTCAATG-----------CCAATCAAG.........................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0
.........................................................................................................................................................................AAACAAACATCCGCAAGAAGA--------------------ACTCG--..........................................................	26	1	1.00	1	0	1	0	0	0	0
.....................................................................................................................................................................TGGAAAACAAACATCCGCAAGAAGA--------------------ACT..............................................................	28	1	1.00	1	0	1	0	0	0	0
..........GCGCTCTCAATG-----------CCAATCAAGG........................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
GCTTTG--CGGCGCTCTCAATG-----------CCA...............................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0
...................................................................................................................................TCTACAATTTCAGGTTTTGGCGGTT.......................................................................................................................	25	1	1.00	1	0	1	0	0	0	0
................TCAATG-----------CCAATCAAGGACGCA...................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
.........GGCGCTCTCAATG-----------CCAATCAAGGAC......................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0
..................................................................................................................................TTCTACAATTTCAGGTTTTGG............................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
...................................................................................................................................TCTACAATTTCAGGTTTTGGCG..........................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
......................................................................................................................................................GCGGTTTGGGCGGATTGG...........................................................................................................	18	1	1.00	1	0	1	0	0	0	0
...TTG--CGGCGCTCTCAATG-----------CCAATCAA..........................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0
...................................................................................................................................TCTACAATTTCAGGTTTTGGCGG.........................................................................................................................	23	1	1.00	1	0	1	0	0	0	0
.............CTCTCAATG-----------CCAATCAAGGAC......................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
........................................................GAAAAAGGTATGTGT--TGCACA-------------ACA....................................................................................................................................................................................	24	8	0.88	7	0	2	0	0	0	5
........................................................GAAAAAGGTATGTGT--TGCACA-------------AC.....................................................................................................................................................................................	23	8	0.88	7	0	6	0	0	0	1
.....................................................................................................................................................................................................................................................CAATCGCTTGGGGAATTGGAGGAGG.....	25	8	0.75	6	0	5	0	0	0	1
.....................................................................................................................................................................................................................................................CAATCGCTTGGGGAATTGG...........	19	8	0.75	6	0	0	1	0	0	5
.................................................................................................................................................................................................................................................TCAGCAATCGCTTGGGGAATTGGAG.........	25	6	0.50	3	0	3	0	0	0	0
.................................................................................................................................................................................................................................................TCAGCAATCGCTTGGGGAATTGG...........	23	6	0.50	3	0	3	0	0	0	0
......................................................................................................................................................................................................................................................AATCGCTTGGGGAATTGGAG.........	20	8	0.25	2	0	2	0	0	0	0
......................................................................................................................................................................................................................................................AATCGCTTGGGGAATTGGAGGA.......	22	8	0.25	2	0	2	0	0	0	0
......................................................................................................................................................................................................................................................AATCGCTTGGGGAATTGGAGG........	21	8	0.25	2	0	2	0	0	0	0
.....................................................................................................................................................................................................................................................CAATCGCTTGGGGAATTGGAGGAGGA....	26	8	0.25	2	0	2	0	0	0	0
......................................................................................................................................................................................................................................................AATCGCTTGGGGAATTGGAGGAG......	23	8	0.25	2	0	2	0	0	0	0
.....................................TCAAGGACGCATTGGGTTGGAAAAA.....................................................................................................................................................................................................................	25	5	0.20	1	0	1	0	0	0	0
....................................ATCAAGGACGCATTGGGTTG...........................................................................................................................................................................................................................	20	5	0.20	1	0	1	0	0	0	0
.................................................................................................................................................................................................................................................TCAGCAATCGCTTGGGGAATTG............	22	6	0.17	1	0	1	0	0	0	0
.................................................TGGGTTGGAAAAAGGTATGTG.............................................................................................................................................................................................................	21	7	0.14	1	0	1	0	0	0	0
.....................................................TTGGAAAAAGGTATGTGT--TGCA......................................................................................................................................................................................................	22	7	0.14	1	0	1	0	0	0	0
.................................................TGGGTTGGAAAAAGGTATGTGT--TGC.......................................................................................................................................................................................................	25	7	0.14	1	0	1	0	0	0	0
..TTTG--CGGCGCTCTCAATG-----------..................................................................................................................................................................................................................................................	18	7	0.14	1	1	0	0	0	0	0
....................................................................................................................................................................................................................TCG--AGCTACAGGTGGAGGGC.........................................	20	7	0.14	1	0	1	0	0	0	0
........................................................................................................................................................................................................................................................TCGCTTGGGGAATTGGAGGAGG.....	22	8	0.13	1	0	1	0	0	0	0
.........................................................AAAAAGGTATGTGT--TGCACA-------------AC.....................................................................................................................................................................................	22	8	0.13	1	0	0	1	0	0	0
.............................................................................................................................................................................................................................................................TGGGGAATTGGAGGAGGAAG..	20	8	0.13	1	0	1	0	0	0	0
.....................................................................................................................................................................................................................................................CAATCGCTTGGGGAATTGGAGA........	22	8	0.13	1	0	0	0	0	0	1
.........................................................................................................................................................................................................................AGCTACAGGTGGAGGGCC........................................	18	8	0.13	1	0	1	0	0	0	0
......................................................................................................................................................................................................................................................AATCGCTTGGGGAATTGGAGGAGG.....	24	8	0.13	1	0	1	0	0	0	0
..................................................................TGTGT--TGCACA-------------ACAAAAGGTAG............................................................................................................................................................................	22	8	0.13	1	0	1	0	0	0	0
................................................................................................................................................................................................................................................................GGAATTGGAGGAGGAAGTG	19	8	0.13	1	0	1	0	0	0	0
....................................................................................................................................................................TTGGAAAACAAACATCCGCAAGAA.......................................................................................	24	8	0.13	1	0	1	0	0	0	0
.....................................................................................................................................................................................................................................................CAATCGCTTGGGGAATTGGAA.........	21	8	0.13	1	0	0	1	0	0	0
........................................................................................................................................................................................................................................................TCGCTTGGGGAATTGGAGGA.......	20	8	0.13	1	0	1	0	0	0	0
.........................................................AAAAAGGTATGTGT--TGCACA-------------ACAA...................................................................................................................................................................................	24	8	0.13	1	0	1	0	0	0	0
....................................................................................................................................................................................................................................................GCAATCGCTTGGGGAATTGGAGGA.......	24	8	0.13	1	0	1	0	0	0	0
....................................................................................................................................................................TTGGAAAACAAACATCCGCAAGAAG......................................................................................	25	8	0.13	1	0	1	0	0	0	0
.....................................................................................................................................................................................................................................................CAATCGCTTGGGGAATTG............	18	8	0.13	1	0	1	0	0	0	0
.....................................................................................................................................................................................................................................................CAATCGCTTGGGGAATTGGAGT........	22	9	0.11	1	0	0	0	0	0	1

dp5

GCTTTG--CGGCGCTCTCAATGCTGTTGGGCCGCCAATCAAGGACGCATTGGGTTGGAAAAAGGTATGTGT--TGCACA-------------ACAAAAGGTAGCA-CACTACT---------ATATTCAATTCTACAATTTCAG---------GTTTGGGCAGATTGGAAAACAAACATCCGCAAGAAGATGTCGAAAACCAAATCAGAAACTCG--AGCTACAGGTGGAGGGCCCTTCGCTCAGCAATCGCTTGGGGAATTGGAGGAGGAAGTG	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
............................................................................................................................................................................................................TCAGAAACTCG--AGCTACAGGTGG..............................................	23	4	171.25	685	0	475	24	0	23	0	5	138	20	0
............................................................................................................................................................................................................TCAGAAACTCG--AGCTACAGGTGGA.............................................	24	4	67.75	271	0	136	4	0	6	0	2	109	14	0
............................................................................................................................................................................................................TCAGAAACTCG--AGCTACAGGTG...............................................	22	4	61.00	244	0	218	8	0	0	1	7	10	0	0
................................................................................................................................AATTCTACAATTTCAG---------GTTTGGG...................................................................................................................	23	5	38.80	194	0	170	1	0	10	0	0	11	2	0
................................................................................................................................AATTCTACAATTTCAG---------GTTTGG....................................................................................................................	22	5	26.60	133	0	98	6	0	2	0	0	26	1	0
................................................................................................................................AATTCTACAATTTCAG---------GTTTGGGC..................................................................................................................	24	5	25.60	128	0	104	18	0	2	0	0	1	3	0
............................................................................................................................................................................................................TCAGAAACTCG--AGCTACAGGT................................................	21	4	22.75	91	0	79	3	0	2	0	2	5	0	0
............................................................................................................................................................................................................TCAGAAACTCG--AGCTACAGGTGGAG............................................	25	4	21.25	85	0	47	1	0	1	0	3	31	2	0
............................................................................................................................................................................................................TCAGAAACTCG--AGCTACAGGTGGAGG...........................................	26	4	19.50	78	0	29	0	0	0	0	0	40	9	0
.................................................................................................................................................................................................................................................TCAGCAATCGCTTGGGGAATTGGAGG........	26	2	18.00	36	0	17	0	0	0	0	0	16	3	0
.................................................TGGGTTGGAAAAAGGTATGTGT--T.........................................................................................................................................................................................................	23	3	17.67	53	0	51	1	0	1	0	0	0	0	0
.................................................TGGGTTGGAAAAAGGTATGTGT--..........................................................................................................................................................................................................	22	3	17.33	52	0	48	3	0	0	0	1	0	0	0
.............................................................................................................................................................................................................CAGAAACTCG--AGCTACAGGTGG..............................................	22	4	16.75	67	0	52	1	0	4	0	0	10	0	0
.................................................TGGGTTGGAAAAAGGTATGTGT--TG........................................................................................................................................................................................................	24	3	16.33	49	0	46	2	0	1	0	0	0	0	0
............................................................................................................................................................................................................TCAGAAACTCG--AGCTACAGG.................................................	20	4	14.00	56	0	53	1	0	0	0	1	0	1	0
.................................................................................................................................................................................................................................................TCAGCAATCGCTTGGGGAATTGGAG.........	25	2	14.00	28	0	15	3	0	1	0	0	4	5	0
.................................................................................................................................................................................................................................................TCAGCAATCGCTTGGGGAATTGG...........	23	2	13.50	27	0	22	0	0	0	0	1	2	2	0
.................................................................................................................................................................................................................................................TCAGCAATCGCTTGGGGAATTGGA..........	24	2	13.50	27	0	17	0	0	0	0	0	9	1	0
.............................................................................................................................................................................................................CAGAAACTCG--AGCTACAGGTGGAGG...........................................	25	4	10.25	41	0	10	0	0	0	0	0	26	5	0
.................................................TGGGTTGGAAAAAGGTATGTG.............................................................................................................................................................................................................	21	3	10.00	30	0	26	0	0	3	0	1	0	0	0
.................................................................................................................................................................................................................................................TCAGCAATCGCTTGGGGAATTG............	22	2	9.00	18	0	16	0	0	0	0	1	0	1	0
.............................................................................................................................................................................................................CAGAAACTCG--AGCTACAGGTGGA.............................................	23	4	8.50	34	0	22	0	0	1	0	0	10	1	0
.................................................................................................................................................................................................................................................TCAGCAATCGCTTGGGGAATTGGAGGA.......	27	2	8.50	17	0	6	0	0	0	0	0	10	1	0
.................................................TGGGTTGGAAAAAGGTATGTGT--TGC.......................................................................................................................................................................................................	25	3	8.33	25	0	14	2	0	3	0	6	0	0	0
................................................................................................................................AATTCTACAATTTCAG---------GTTTG.....................................................................................................................	21	5	5.80	29	0	26	1	0	2	0	0	0	0	0
.....................................................................................................................................................................................................................................................CAATCGCTTGGGGAATTGGAGGA.......	23	2	5.50	11	0	10	1	0	0	0	0	0	0	0
.............................................................................................................................................................................................................CAGAAACTCG--AGCTACAGGTGGAG............................................	24	4	5.00	20	0	8	2	0	0	0	1	7	2	0
.............................................................................................................................................................................................................CAGAAACTCG--AGCTACAGGTG...............................................	21	4	5.00	20	0	20	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................TCAGAAACTCG--AGCTACAGGTGGAGGG..........................................	27	4	4.75	19	1	3	0	0	0	0	0	10	5	0
.................................................................................................................................................................................................................................................TCAGCAATCGCTTGGGGAATTGGAA.........	25	2	4.00	8	0	7	1	0	0	0	0	0	0	0
................................................................................................................................AATTCTACAATTTCAG---------GTTTGGGCA.................................................................................................................	25	4	4.00	16	0	16	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................CAATCGCTTGGGGAATTGGAGGAGG.....	25	2	3.50	7	0	3	0	0	0	0	0	4	0	0
.....................................................................................................................................................................................................................................................CAATCGCTTGGGGAATTGGAGG........	22	2	3.50	7	0	5	0	0	0	0	2	0	0	0
.....................................................................................................................................................................TGGAAAACAAACATCCGCAAGAAGA.....................................................................................	25	3	3.33	10	0	9	0	0	0	0	0	0	1	0
.................................................................................................................................ATTCTACAATTTCAG---------GTTTGGG...................................................................................................................	22	5	3.20	16	0	14	0	0	0	0	0	2	0	0
.................................................................................................................................ATTCTACAATTTCAG---------GTTTGG....................................................................................................................	21	5	3.20	16	0	16	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................CAGAAACTCG--AGCTACAGGTGGAGGG..........................................	26	4	3.00	12	0	5	0	0	0	0	0	5	2	0
............................................................................................................................................................................................................TCAGAAACTCG--AGCTACAGGTGA..............................................	23	4	3.00	12	0	9	3	0	0	0	0	0	0	0
.........GGCGCTCTCAATGCTGTTGGGCC...................................................................................................................................................................................................................................................	23	2	2.50	5	0	5	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................TCAGCAATCGCTTGGGGAATTGGAGGAG......	28	2	2.50	5	0	4	0	0	0	0	0	1	0	0
........................................................GAAAAAGGTATGTGT--TGCACA-------------AC.....................................................................................................................................................................................	23	3	2.33	7	0	6	0	0	0	0	0	0	1	0
.................................................TGGGTTGGAAAAAGGTATGTGT--TGCAC.....................................................................................................................................................................................................	27	3	2.33	7	0	6	1	0	0	0	0	0	0	0
................................................................................................................................AATTCTACAATTTCAG---------GTTTGGGCAG................................................................................................................	26	4	2.00	8	1	6	0	0	0	0	0	0	1	0
....................TGCTGTTGGGCCGCCAATCAAGGACGC....................................................................................................................................................................................................................................	27	2	2.00	4	0	0	0	0	0	0	0	2	2	0
.............................................................................................................................................................................................................CAGAAACTCG--AGCTACAGGTGGAGGGC.........................................	27	4	2.00	8	0	1	0	0	0	0	0	2	5	0
.................................................................................................................................ATTCTACAATTTCAG---------GTTTGGGC..................................................................................................................	23	5	2.00	10	0	10	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................TCAGAAACTCG--AGCTACAG..................................................	19	4	2.00	8	0	8	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................CAATCGCTTGGGGAATTGGAG.........	21	2	2.00	4	0	3	1	0	0	0	0	0	0	0
............................................................................................................................................................................................................TCAGAAACTCG--AGCTACAGGTGGAGGGC.........................................	28	4	1.75	7	0	0	0	0	0	0	0	0	7	0
.............................................................................................................................................................................................................CAGAAACTCG--AGCTACAGG.................................................	19	4	1.75	7	0	6	1	0	0	0	0	0	0	0
............................................................................................................................................................................................................TCAGAAACTCG--AGCTACAGGTGT..............................................	23	4	1.75	7	0	7	0	0	0	0	0	0	0	0
........................................................GAAAAAGGTATGTGT--TGCACA-------------A......................................................................................................................................................................................	22	3	1.67	5	0	2	0	0	0	0	0	2	1	0
..................................................GGGTTGGAAAAAGGTATGTGT--TG........................................................................................................................................................................................................	23	3	1.67	5	0	4	0	0	1	0	0	0	0	0
..................................................GGGTTGGAAAAAGGTATGTGT--T.........................................................................................................................................................................................................	22	3	1.67	5	0	5	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................CAATCGCTTGGGGAATTGGAGGAG......	24	2	1.50	3	0	3	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................TCAGCAATCGCTTGGGGAATTGGT..........	24	2	1.50	3	0	2	0	0	1	0	0	0	0	0
........................................................................................................................................................................................................................................................TCGCTTGGGGAATTGGAGGAGGAA...	24	2	1.50	3	0	3	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................AGAAACTCG--AGCTACAGGTGG..............................................	21	4	1.50	6	0	4	1	0	0	0	0	1	0	0
..........GCGCTCTCAATGCTGTTGGGCC...................................................................................................................................................................................................................................................	22	2	1.50	3	0	3	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................CAGCAATCGCTTGGGGAATTGG...........	22	2	1.50	3	0	3	0	0	0	0	0	0	0	0
.........GGCGCTCTCAATGCTGTTGGGCCG..................................................................................................................................................................................................................................................	24	2	1.50	3	0	3	0	0	0	0	0	0	0	0
.................................................TGGGTTGGAAAAAGGTATGTGT--TGCA......................................................................................................................................................................................................	26	3	1.33	4	0	4	0	0	0	0	0	0	0	0
....TG--CGGCGCTCTCAATGCTGTTGG......................................................................................................................................................................................................................................................	23	3	1.33	4	0	3	0	0	0	0	0	1	0	0
....TG--CGGCGCTCTCAATGCTGTTGGG.....................................................................................................................................................................................................................................................	24	3	1.33	4	0	3	1	0	0	0	0	0	0	0
.........GGCGCTCTCAATGCTGTTGGG.....................................................................................................................................................................................................................................................	21	3	1.33	4	0	4	0	0	0	0	0	0	0	0
....................................ATCAAGGACGCATTGGGTTG...........................................................................................................................................................................................................................	20	3	1.33	4	0	4	0	0	0	0	0	0	0	0
.................................................TGGGTTGGAAAAAGGTATGT..............................................................................................................................................................................................................	20	3	1.33	4	0	2	0	0	0	0	1	0	1	0
............................................................................................................................................................................................................TCAGAAACTCG--AGCTACAGGTGGT.............................................	24	4	1.25	5	0	1	0	0	0	0	0	4	0	0
.............................................................................................................................................................................................................CAGAAACTCG--AGCTACAGGT................................................	20	4	1.25	5	0	4	0	0	1	0	0	0	0	0
..................................................................................................................................................................................................................................................CAGCAATCGCTTGGGGAATTGGAA.........	24	2	1.00	2	0	2	0	0	0	0	0	0	0	0
....................TGCTGTTGGGCCGCCAATCAAGGACG.....................................................................................................................................................................................................................................	26	2	1.00	2	0	1	0	0	0	0	0	0	1	0
.....................................................................................................................................................................TGGAAAACAAACATCCGCAAGAAG......................................................................................	24	4	1.00	4	0	3	0	0	0	0	0	0	1	0
.................................................TGGGTTGGAAAAAGGTATGTGA--..........................................................................................................................................................................................................	22	3	1.00	3	0	3	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................TGGGGAATTGGAGGAGGAAGT.	21	2	1.00	2	0	2	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TCGCTTGGGGAATTGGAGGAG......	21	2	1.00	2	0	2	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TCGCTTGGGGAATTGGAGGA.......	20	2	1.00	2	0	2	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................CAGCAATCGCTTGGGGAATTG............	21	2	1.00	2	0	2	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TCGCTTGGGGAATTGGAGGAGGAAG..	25	2	1.00	2	0	2	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................AGCAATCGCTTGGGGAATTGGAGG........	24	2	1.00	2	0	0	0	0	0	0	0	1	1	0
........................................................................................................................................................................................................................................................TCGCTTGGGGAATTGGAGGAGGA....	23	2	1.00	2	0	2	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TCGCTTGGGGAATTGGAG.........	18	2	1.00	2	0	2	0	0	0	0	0	0	0	0
.....G--CGGCGCTCTCAATGCTGTTGG......................................................................................................................................................................................................................................................	22	3	1.00	3	0	3	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................TCAGCAATCGCTTGGGGAATTGGAGT........	26	2	1.00	2	0	0	2	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................CAGCAATCGCTTGGGGAATTGGA..........	23	2	1.00	2	0	2	0	0	0	0	0	0	0	0
.........GGCGCTCTCAATGCTGTTGG......................................................................................................................................................................................................................................................	20	3	1.00	3	0	3	0	0	0	0	0	0	0	0
..................................................GGGTTGGAAAAAGGTATGTGT--..........................................................................................................................................................................................................	21	3	1.00	3	0	3	0	0	0	0	0	0	0	0
..TTTG--CGGCGCTCTCAATGCTGTTGGGC....................................................................................................................................................................................................................................................	27	3	1.00	3	0	3	0	0	0	0	0	0	0	0
.................................................................................................................................ATTCTACAATTTCAG---------GTTTGGGCA.................................................................................................................	24	4	1.00	4	0	4	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................TCAGCAATCGCTTGGGGAATT.............	21	2	1.00	2	0	2	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................CCAAATCAGAAACTCG--AGCTACAGG.................................................	25	1	1.00	1	0	0	0	0	0	0	1	0	0	0
................................................................................................................................AATTCTACAATTTCAG---------GTTTGGGA..................................................................................................................	24	5	1.00	5	0	5	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TCGCTTGGGGAATTGGAGGAGG.....	22	2	1.00	2	0	2	0	0	0	0	0	0	0	0
....................................ATCAAGGACGCATTGGGTTGG..........................................................................................................................................................................................................................	21	3	1.00	3	0	2	0	0	0	0	0	1	0	0
.................................................................................................................................................................................ATCCGCAAGAAGATGTCGAAAACC..........................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TCGCTTGGGGAATTGGAGG........	19	2	1.00	2	0	2	0	0	0	0	0	0	0	0
....................................................GTTGGAAAAAGGTATGTGT--TGC.......................................................................................................................................................................................................	22	3	1.00	3	0	2	1	0	0	0	0	0	0	0
............................................................................................................................................................................................................TCAGAAACTCG--AGCTACAGGTGGAA............................................	25	4	1.00	4	0	3	0	0	1	0	0	0	0	0
......................................CAAGGACGCATTGGGTTGGAAAAA.....................................................................................................................................................................................................................	24	3	1.00	3	0	0	0	0	0	0	0	3	0	0
................................................................................................................................AATTCTACAATTTCAG---------GTTTGGGCAGA...............................................................................................................	27	4	0.75	3	0	3	0	0	0	0	0	0	0	0
.....................................................................................................................................................................TGGAAAACAAACATCCGCAAGA........................................................................................	22	4	0.75	3	0	3	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................TCAGAAACTCG--AGCTACAGGTA...............................................	22	4	0.75	3	0	3	0	0	0	0	0	0	0	0
..................................................GGGTTGGAAAAAGGTATGTGT--TGC.......................................................................................................................................................................................................	24	3	0.67	2	0	2	0	0	0	0	0	0	0	0
......................................CAAGGACGCATTGGGTTGGA.........................................................................................................................................................................................................................	20	3	0.67	2	0	1	0	0	0	0	0	1	0	0
.................................................TGGGTTGGAAAAAGGTATGTGC--..........................................................................................................................................................................................................	22	3	0.67	2	0	0	2	0	0	0	0	0	0	0
................................................TTGGGTTGGAAAAAGGTATGTG.............................................................................................................................................................................................................	22	3	0.67	2	0	1	0	0	0	0	0	1	0	0
........................................................GAAAAAGGTATGTGT--TGC.......................................................................................................................................................................................................	18	3	0.67	2	0	1	0	0	0	0	0	1	0	0
..................................................GGGTTGGAAAAAGGTATGTG.............................................................................................................................................................................................................	20	3	0.67	2	0	2	0	0	0	0	0	0	0	0
..................................CAATCAAGGACGCATTGGGTTGGA.........................................................................................................................................................................................................................	24	3	0.67	2	0	0	0	0	0	0	0	2	0	0
..........GCGCTCTCAATGCTGTTGGGC....................................................................................................................................................................................................................................................	21	3	0.67	2	0	2	0	0	0	0	0	0	0	0
........................................................GAAAAAGGTATGTGT--TGCACA-------------ACAAAA.................................................................................................................................................................................	27	3	0.67	2	0	0	0	0	0	0	0	2	0	0
....TG--CGGCGCTCTCAATGCTGTTG.......................................................................................................................................................................................................................................................	22	3	0.67	2	0	2	0	0	0	0	0	0	0	0
....................................................GTTGGAAAAAGGTATGTGT--TGCACA-------------AC.....................................................................................................................................................................................	27	3	0.67	2	0	0	0	0	0	0	2	0	0	0
....................................................................................................................................................................TTGGAAAACAAACATCCGCAAGAAGA.....................................................................................	26	3	0.67	2	0	2	0	0	0	0	0	0	0	0
......................................CAAGGACGCATTGGGTTGGAAAA......................................................................................................................................................................................................................	23	3	0.67	2	0	1	0	0	0	0	0	1	0	0
........................................................GAAAAAGGTATGTGT--TGCACA-------------ACA....................................................................................................................................................................................	24	3	0.67	2	0	1	0	0	0	1	0	0	0	0
......................................CAAGGACGCATTGGGTTGGAA........................................................................................................................................................................................................................	21	3	0.67	2	0	2	0	0	0	0	0	0	0	0
.......................................AAGGACGCATTGGGTTG...........................................................................................................................................................................................................................	17	3	0.67	2	0	0	0	0	0	0	0	2	0	0
........................................................GAAAAAGGTATGTGT--TGCACA-------------.......................................................................................................................................................................................	21	3	0.67	2	0	2	0	0	0	0	0	0	0	0
......................................CAAGGACGCATTGGGTTGGAAA.......................................................................................................................................................................................................................	22	3	0.67	2	0	2	0	0	0	0	0	0	0	0
.....................................................TTGGAAAAAGGTATGTGT--..........................................................................................................................................................................................................	18	3	0.67	2	0	2	0	0	0	0	0	0	0	0
.................................................TGGGTTGGAAAAAGGTATG...............................................................................................................................................................................................................	19	3	0.67	2	0	2	0	0	0	0	0	0	0	0
........................................................GAAAAAGGTATGTGT--TGCACA-------------ACAA...................................................................................................................................................................................	25	3	0.67	2	0	0	0	0	0	0	0	1	1	0
..TTTG--CGGCGCTCTCAATGC............................................................................................................................................................................................................................................................	19	3	0.67	2	0	0	0	0	0	0	0	2	0	0
.................................................TGGGTTGGAAAAAGGTATGTGT--TGA.......................................................................................................................................................................................................	25	3	0.67	2	0	2	0	0	0	0	0	0	0	0
......................................................................................................................................................................GGAAAACAAACATCCGCAAGAAGA.....................................................................................	24	3	0.67	2	0	2	0	0	0	0	0	0	0	0
.................................................TGGGTTGGAAAAAGGTATGTGT--TGCACA-------------.......................................................................................................................................................................................	28	3	0.67	2	0	2	0	0	0	0	0	0	0	0
................................................................................................................................AATTCTACAATTTCAG---------GTT.......................................................................................................................	19	5	0.60	3	0	3	0	0	0	0	0	0	0	0
.................................................................................................................................ATTCTACAATTTCAG---------GTTTG.....................................................................................................................	20	5	0.60	3	0	3	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................TGGGGAATTGGAGGAGGAAGTG	22	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................CAGCAATCGCTTGGGGAATTGGAGA........	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................TCG--AGCTACAGGTGGAGGG..........................................	19	4	0.50	2	0	1	0	0	1	0	0	0	0	0
.............CTCTCAATGCTGTTGGGCCGC.................................................................................................................................................................................................................................................	21	2	0.50	1	0	1	0	0	0	0	0	0	0	0
............GCTCTCAATGCTGTTGGGCCGC.................................................................................................................................................................................................................................................	22	2	0.50	1	0	1	0	0	0	0	0	0	0	0
....................TGCTGTTGGGCCGCCAATCAAGGACGCA...................................................................................................................................................................................................................................	28	2	0.50	1	0	0	1	0	0	0	0	0	0	0
............................................................................................................................................................................................................TCAGAAACTCG--AGCTACAGGTGCCC............................................	25	4	0.50	2	0	0	0	0	0	0	0	0	2	0
............................................................................................................................................................................................................TCAGAAACTCG--AGCTACAGGTGGAAAA..........................................	27	4	0.50	2	0	2	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................TCAGAAACTCG--AGCTACAGGA................................................	21	4	0.50	2	0	2	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................TCAGAAACTCG--AGCTAC....................................................	17	4	0.50	2	0	0	0	0	0	0	0	2	0	0
................TCAATGCTGTTGGGCCGCCAA..............................................................................................................................................................................................................................................	21	2	0.50	1	0	0	0	0	0	0	0	1	0	0
....................TGCTGTTGGGCCGCCAATCAA..........................................................................................................................................................................................................................................	21	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..............TCTCAATGCTGTTGGGCCGCC................................................................................................................................................................................................................................................	21	2	0.50	1	0	0	1	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TCGCTTGGGGAATTGGAGGAT......	21	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................AGAAACTCG--AGCTACAGGTG...............................................	20	4	0.50	2	0	2	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................ACTCG--AGCTACAGGTGGAGGG..........................................	21	4	0.50	2	0	2	0	0	0	0	0	0	0	0
................TCAATGCTGTTGGGCCGCCAAT.............................................................................................................................................................................................................................................	22	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................TCAGCAATCGCTTGGGGAATTGGAGGT.......	27	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................CAATCGCTTGGGGAATTGGA..........	20	2	0.50	1	0	1	0	0	0	0	0	0	0	0
....................TGCTGTTGGGCCGCCAATCAAGG........................................................................................................................................................................................................................................	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.........GGCGCTCTCAATGCTGTTGGGCCGC.................................................................................................................................................................................................................................................	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0
................TCAATGCTGTTGGGCCGC.................................................................................................................................................................................................................................................	18	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................CAGCAATCGCTTGGGGAATTGGAGGAA......	27	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...............CTCAATGCTGTTGGGCCGCC................................................................................................................................................................................................................................................	20	2	0.50	1	0	0	0	0	0	1	0	0	0	0
......................................................................................................................................................................................................................................................AATCGCTTGGGGAATTGGAGG........	21	2	0.50	1	0	1	0	0	0	0	0	0	0	0
................TCAATGCTGTTGGGCCGCCAATC............................................................................................................................................................................................................................................	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................TCAGCAATCGCTTGGGGAATTGGAT.........	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0
....................TGCTGTTGGGCCGCCAATT............................................................................................................................................................................................................................................	19	2	0.50	1	0	1	0	0	0	0	0	0	0	0
....TG--CGGCGCTCTCAATGCTGTTGGGCCG..................................................................................................................................................................................................................................................	27	2	0.50	1	0	1	0	0	0	0	0	0	0	0
....TG--CGGCGCTCTCAATGCTGTTGGGCC...................................................................................................................................................................................................................................................	26	2	0.50	1	1	0	0	0	0	0	0	0	0	0
......................................................................T--TGCACA-------------ACAAAAGGTAGCA-CA.......................................................................................................................................................................	22	4	0.50	2	0	2	0	0	0	0	0	0	0	0
............GCTCTCAATGCTGTTGGGCCG..................................................................................................................................................................................................................................................	21	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................CAGCAATCGCTTGGGGAATTGGAGG........	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.................CAATGCTGTTGGGCCGCCAAT.............................................................................................................................................................................................................................................	21	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................CAGCAATCGCTTGGGGAATTGA...........	22	2	0.50	1	0	0	1	0	0	0	0	0	0	0
..............................................................................................................................................................................................................AGAAACTCG--AGCTACAGGTGGAGG...........................................	24	4	0.50	2	0	0	0	0	0	0	0	2	0	0
.............CTCTCAATGCTGTTGGGCCGCC................................................................................................................................................................................................................................................	22	2	0.50	1	0	1	0	0	0	0	0	0	0	0
........CGGCGCTCTCAATGCTGTTGGGCC...................................................................................................................................................................................................................................................	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................AATCGCTTGGGGAATTGG...........	18	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................AGCAATCGCTTGGGGAATTGGAG.........	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0
....................TGCTGTTGGGCCGCCAATCAAGGACGCAT..................................................................................................................................................................................................................................	29	2	0.50	1	0	0	0	0	0	0	0	1	0	0
.................................................................................................................................................................................................................................................TCAGCAATCGCTTGGGGAATTGGTA.........	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................TTGGAAAACAAACATCCGCAAGAAG......................................................................................	25	4	0.50	2	0	1	0	0	0	0	0	1	0	0
.CTTTG--CGGCGCTCTCAATGCTT..........................................................................................................................................................................................................................................................	22	2	0.50	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................GGAATTGGAGGAGGAAGTG	19	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................CGCTTGGGGAATTGGAGGAC......	20	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..............TCTCAATGCTGTTGGGCCGCCA...............................................................................................................................................................................................................................................	22	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................TCAGCAATCGCTTGGGGAATTGGAGGAA......	28	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..........GCGCTCTCAATGCTGTTGGGCCG..................................................................................................................................................................................................................................................	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...TTG--CGGCGCTCTCAATGCTGTTGGGCC...................................................................................................................................................................................................................................................	27	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................CAGCAATCGCTTGGGGAATTGGAG.........	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................TCAGCAATCGCTTGGGGAATTGGAGGAC......	28	2	0.50	1	0	0	1	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TCGCTTGGGGAATTGGAGGAGGT....	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................TCAGAAACTCG--AGCTACAGGTGGAAA...........................................	26	4	0.50	2	0	1	0	0	1	0	0	0	0	0
.............................................................................................................................................................................................................................................................TGGGGAATTGGAGGAGGAAG..	20	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................CAATCGCTTGGGGAATTGGAGGT.......	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...............CTCAATGCTGTTGGGCCGC.................................................................................................................................................................................................................................................	19	2	0.50	1	0	1	0	0	0	0	0	0	0	0
......................................................................T--TGCACA-------------ACAAAAGGTAGCA-CAC......................................................................................................................................................................	23	4	0.50	2	0	2	0	0	0	0	0	0	0	0
................................................................................................................................AATTCTACAATTTCAG---------GTTTGGT...................................................................................................................	23	5	0.40	2	0	1	0	0	1	0	0	0	0	0
........................................................GAAAAAGGTATGTGT--TGCAC.....................................................................................................................................................................................................	20	3	0.33	1	0	1	0	0	0	0	0	0	0	0
...................................................GGTTGGAAAAAGGTATGTGT--TG........................................................................................................................................................................................................	22	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.........GGCGCTCTCAATGCTGTTGGGC....................................................................................................................................................................................................................................................	22	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.................................................TGGGTTGGAAAAAGGTATGTGT--TA........................................................................................................................................................................................................	24	3	0.33	1	0	1	0	0	0	0	0	0	0	0
...................................................GGTTGGAAAAAGGTATGTGT--..........................................................................................................................................................................................................	20	3	0.33	1	0	1	0	0	0	0	0	0	0	0
................................................TTGGGTTGGAAAAAGGTATGT..............................................................................................................................................................................................................	21	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.....................GCTGTTGGGCCGCCAATCAAGG........................................................................................................................................................................................................................................	22	3	0.33	1	0	0	0	0	0	0	0	0	1	0
..............................................CATTGGGTTGGAAAAAGGTAT................................................................................................................................................................................................................	21	3	0.33	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................AAAACAAACATCCGCAAGAAGAA....................................................................................	23	3	0.33	1	0	1	0	0	0	0	0	0	0	0
...................................................GGTTGGAAAAAGGTATGTGT--TGC.......................................................................................................................................................................................................	23	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................CCCTTCGCTCAGCAATCGCTTGGGG.................	25	3	0.33	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................TACAGGTGGAGGGCCCTTCGCTCAGCA............................	27	3	0.33	1	0	0	0	0	0	0	1	0	0	0
.....................................TCAAGGACGCATTGGGTTGGAAAAAGAA..................................................................................................................................................................................................................	28	3	0.33	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................CAAATCAGAAACTCG--AGCTACAGG.................................................	24	3	0.33	1	0	1	0	0	0	0	0	0	0	0
....................................................GTTGGAAAAAGGTATGTGT--TG........................................................................................................................................................................................................	21	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................TCGCTCAGCAATCGCTTGGG..................	20	3	0.33	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................AAAACAAACATCCGCAAGAAGAT....................................................................................	23	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.................................................................ATGTGT--TGCACA-------------ACAAAAGGTAGC...........................................................................................................................................................................	24	3	0.33	1	0	1	0	0	0	0	0	0	0	0
......................CTGTTGGGCCGCCAATCAAGGACGCAAA.................................................................................................................................................................................................................................	28	3	0.33	1	0	1	0	0	0	0	0	0	0	0
...............................................ATTGGGTTGGAAAAAGGTATGTGT--TG........................................................................................................................................................................................................	26	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................CCCTTCGCTCAGCAATCGCTTGG...................	23	3	0.33	1	0	1	0	0	0	0	0	0	0	0
..TTTG--CGGCGCTCTCAATGCTG..........................................................................................................................................................................................................................................................	21	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................TGGAAAACAAACATCCGCAAGAAGATG...................................................................................	27	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.......................................AAGGACGCATTGGGTTGGAAAAAGGT..................................................................................................................................................................................................................	26	3	0.33	1	0	0	0	0	0	0	0	0	1	0
...............................................................................................................................CAATTCTACAATTTCAG---------GTTTGG....................................................................................................................	23	3	0.33	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................ACAAACATCCGCAAGAAGAT....................................................................................	20	3	0.33	1	0	1	0	0	0	0	0	0	0	0
..................................................GGGTTGGAAAAAGGTATG...............................................................................................................................................................................................................	18	3	0.33	1	0	1	0	0	0	0	0	0	0	0
....................................................GTTGGAAAAAGGTATGTGT--TGCA......................................................................................................................................................................................................	23	3	0.33	1	0	1	0	0	0	0	0	0	0	0
...................................................GGTTGGAAAAAGGTATGTGT--T.........................................................................................................................................................................................................	21	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.................................................TGGGTTGGAAAAAGGTATGTGT--AA........................................................................................................................................................................................................	24	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................AAACAAACATCCGCAAGAAGA.....................................................................................	21	3	0.33	1	0	0	0	0	0	0	0	1	0	0
....TG--CGGCGCTCTCAATGCTGTTGGGT....................................................................................................................................................................................................................................................	25	3	0.33	1	0	1	0	0	0	0	0	0	0	0
....................................................GTTGGAAAAAGGTATGTGT--..........................................................................................................................................................................................................	19	3	0.33	1	0	0	0	0	0	0	1	0	0	0
........................................................................................................................................................................................................................................GCCCTTCGCTCAGCAATCGCTTGG...................	24	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.......................TGTTGGGCCGCCAATCAAGGACGCA...................................................................................................................................................................................................................................	25	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.................................................TGGGTTGGAAAAAGGTATGTGT--A.........................................................................................................................................................................................................	23	3	0.33	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................TAGCA-CACTACT---------ATATTC...................................................................................................................................................	18	3	0.33	1	0	0	1	0	0	0	0	0	0	0
...............................CGCCAATCAAGGACGCATTGG...............................................................................................................................................................................................................................	21	3	0.33	1	0	1	0	0	0	0	0	0	0	0
..............................CCGCCAATCAAGGACGCATTG................................................................................................................................................................................................................................	21	3	0.33	1	0	0	0	0	0	0	0	1	0	0
..TTTG--CGGCGCTCTCAATGCTGT.........................................................................................................................................................................................................................................................	22	3	0.33	1	0	0	0	0	0	0	1	0	0	0
....TG--CGGCGCTCTCAATGCTG..........................................................................................................................................................................................................................................................	19	3	0.33	1	0	1	0	0	0	0	0	0	0	0
....................................................GTTGGAAAAAGGTATGTGT--TGCACA-------------.......................................................................................................................................................................................	25	3	0.33	1	0	0	0	0	0	0	1	0	0	0
................................................TTGGGTTGGAAAAAGGTATGTGT--TGCAC.....................................................................................................................................................................................................	28	3	0.33	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................CAAATCAGAAACTCG--AGCTACAG..................................................	23	3	0.33	1	0	1	0	0	0	0	0	0	0	0
..................................CAATCAAGGACGCATTGGGTTGG..........................................................................................................................................................................................................................	23	3	0.33	1	0	0	0	0	0	0	0	1	0	0

droVir3

TT-----------------------------------------------------------------------------------------------------------------------------------------TACAG---------GTCTGGTCGGACTGGAAGATATCCATTAAAAAGAAGCTATTGCAAATTAAAAAGGACTCAGC--TGGCCTTGGAGGCGGCAC---CCAGCATGTGGTCTTAACGCCCGCCGAGGAGACAATT	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
..............................................................................................................................................................................................TATTGCAAATTAAAAAGGAC.................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1

droBip1

GCTTGC--CGGTGCATTGAACGCGATTGGCCCTCCAATTAAAGATGTTGCGGGATGGAAAAAGGTATGGGT--ATCCCCAGAATTATGACAAACTAATATAC--------------------ATATTATAATATTACATTCCAG---------GTTTGGTGCG-----AAGGCCAATATTCGGAAGAA-----------ATAAGGCAGAGGTCAG--GGCTACGGGCGGGGGTCCTTACTGCCAGCAACCGCTGACAGCAATGGAGGAGGACGTG	Size	Hit Count	Total Norm	Total
No Reads

droKik1

ACTTTG--CAGCGCCTTGAACGACGTTGGCCCTCCGACCAAAGATGTTGGAGGTTGGAAAAGGGTAT------TGTCCA-------------ACAAATATAAGAA-AAGTTGT---------TTATTATAATAATATTTTCCAG---------ATTTGGTGCGATTGGAAGGCGACAATTCGTAAGAAACTTGCCAAAAATAAGGCCGAGATCAG--GGCTAGAGGTGGGGGTCCCTACTCCCAGCTCGCAATAAGCGAAGTGGAGGAGGAGGTT	Size	Hit Count	Total Norm	Total
No Reads

droFic1

TCTAAC--AGGCGCGTTGAACGCTGTTGGGCCTCCCATTAAAGACGCTGCAGGGTGGAAGAAGGTATGACTATTAATTA-------------ATATATTAAAGAA-AGCTAAT---------ATATCAAAGAAAAATATTCCAG---------GTTTGGTGCGACTGGAAGGCCAACATACGCAAAAAATTGGCAAAAAACAAGGCTGAGGCCAG--AGCCACTGGCGGTGGTCCTTACTCTCAGCAAGCAATAACGGACGTGGAGGAGGAGGTG	Size	Hit Count	Total Norm	Total
No Reads

droEle1

GCTCTGGCAGACAATCTAAACACTGCTGGGCCACCGGTAAAAGATGTCTCCGGATGGAAGAAGGTATATTT--TATTTA-------------GTTAAAATAAATA-ATTTAAACTTTTAAACATACCAAGGTTTCATTTAAAAG---------GCTTGGTGTGACTGGAAAGCCGTCATA-AAAAGAAATCGGCGCACAACCGAAAATAGGCTTCAGCCCCATAGCTGGGGCGTCCTTTAACCAGGTGGCTTTGACCGATATAAAAGCCTCCGTG	Size	Hit Count	Total Norm	Total
No Reads

droTak1

ACTAGC--CGCAGAGTTGAACCCAGCAGGACCGCCTGTTAAGGATGTCTCCGGATGGAAGAAGGTTGGCTT--ACATTT---------TCAAACTAATATACATTTCTATAAACTTATTCTCATTCAACTTCATATATTTAAAG---------GCATGGTGCGATTGGAAGGGAGCGATTAAAAAGAAATTGGCTCACAACCGAAAGGAGTCGAC--TGCTACCGGTGGGGGTCCCTTCAACCAGGTGACAGTATCGGATGTGGAGGGATCTGTG	Size	Hit Count	Total Norm	Total
No Reads

droYak3

Size

Hit Count

Total Norm

Total

M026
Head

M043
Female-body

M056
Embryo

V046
Embryo

V052
Head

V058
Head

V120
Male-body

SRR1275488
Male larvae

SRR1275486
Male prepupae

SRR1275484
Male prepupae

GSM1528802
follicle cells

No Reads

dpe_1484

scaffold_326:10992-11106 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-14.4	-14.3	-14.2