ID:

dpe_1470

 Coordinate:

scaffold_32:554248-554398 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dper_GLEANR_17679:1]; CDS [Dper\GL16084-cds]; intron [Dper\GL16084-in]

Repeatable elements

NameClassFamilyStrand
A-richLow_complexityLow_complexity+

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTTCGAGGAGAAGCCGCTCCACGTGCCCCCATTGCCGGAGCTGCAGAATGGTGAGCGACGGGGAGCGGGGAGATCAGATCTTAAAGATAAAGATACTACGTGCCTCCGCCCGATGCCATGTGCAAATGACCTTCAGAACTGTGTCGAACTTTCCATAGCCGGTTTTCTTTAGAGTTTTTTTTTTGTTTTCGGTTTTCTGTTCTGTTTTTCTTCTTTGTTTTCGTCGCGACGCCTCTAAACTGACAAAACAT
**************************************************(((.(((.(((...((((((..((.(((((((.......))))).))..))..))))))))).))))))..(((...((((...(((((......(((((((((......))........))))))).......))))).))))...))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M021
embryo
 V057
head
 M042
female body
 V050
head
 V111
male body
..................CCACGTGCCCCCATTGCCGGAGCTGC............................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
...................CACGTGCCCCCATTGCCGGAGCTG................................................................................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0
.....................................................AGCTACGGGGAGCCGCGAG................................................................................................................................................................................... 19 3 15 1.00 15 0 4 7 0 4
...............................................................................................................................................TCGAACTGTCGCTAGCCGGTT....................................................................................... 21 3 2 0.50 1 0 0 0 1 0
....................................................GAGGGACGGGGAGCGAGGACAT................................................................................................................................................................................. 22 3 2 0.50 1 0 1 0 0 0
........................GCCCACATTGCCGAAGCTGC............................................................................................................................................................................................................... 20 2 4 0.25 1 0 0 1 0 0
......................................................GCTACGGGGAGCCGCGAG................................................................................................................................................................................... 18 3 20 0.25 5 0 2 0 0 3
.........................................................ACGGGGAACGGGGAGTTC................................................................................................................................................................................ 18 2 8 0.13 1 0 1 0 0 0
......................................................GCGACGGGGAGCCGCGAG................................................................................................................................................................................... 18 2 9 0.11 1 0 1 0 0 0
.....................................................AGCGACGGGGAGCCGCGA.................................................................................................................................................................................... 18 2 10 0.10 1 0 1 0 0 0
...........................................CGGAATGGTGAGCCATGGG............................................................................................................................................................................................. 19 3 19 0.05 1 0 0 0 0 1

Anti-sense strand reads

GAAGCTCCTCTTCGGCGAGGTGCACGGGGGTAACGGCCTCGACGTCTTACCACTCGCTGCCCCTCGCCCCTCTAGTCTAGAATTTCTATTTCTATGATGCACGGAGGCGGGCTACGGTACACGTTTACTGGAAGTCTTGACACAGCTTGAAAGGTATCGGCCAAAAGAAATCTCAAAAAAAAAACAAAAGCCAAAAGACAAGACAAAAAGAAGAAACAAAAGCAGCGCTGCGGAGATTTGACTGTTTTGTA
**************************************************(((.(((.(((...((((((..((.(((((((.......))))).))..))..))))))))).))))))..(((...((((...(((((......(((((((((......))........))))))).......))))).))))...))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total V057
head
 V050
head
 M042
female body
 M021
embryo
..............................................TTACCACTCGCTGCCCCTCGCCC...................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0
.....................................................................................CTATTTCTATGATGCAGGGAT................................................................................................................................................. 21 2 1 1.00 1 1 0 0 0
.........TTTCGGCGAGGTACACGGGGGT............................................................................................................................................................................................................................ 22 2 1 1.00 1 1 0 0 0
...................................................................................................................GGTACACGTTCACGGCAAGT.................................................................................................................... 20 3 17 0.24 4 0 0 4 0
.............................................................................................................................................................................................................................CCAGCGCTGCAGAGATTG............ 18 3 18 0.11 2 0 0 0 2
.............................................................................................................GGCTAGGGTGCACGTTGAC........................................................................................................................... 19 3 15 0.07 1 1 0 0 0
.............................................................CCCCGCCCGTCTAGGCTAG........................................................................................................................................................................... 19 3 18 0.06 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_32:554198-554448 - dpe_1470 CTTCGAGGAGAAGCCGCTCCACGTGCCCCCATTGCCGGAGCTGCAGAATGGTGAGCGA-----CGGGG-----------------------------------------------------------------------A---------------------------------------------------------------------------------------------------------GCGGGGAGATCAGATCTTAAAGATAAAGATAC---TACGTGCC---TCCG--------------C--CC----------------GA-TGC-----------------------------------CAT-GTGCAAATGACCTTCA---G-AACTGTGT------CGAACTTTCCA------TAGCCGGTTTT-CTTTAGA-----GTTTTTTT--------TTT----GTTTTCGG-------TTTTCTGTTCTG--------TTTTT-----CTTC-TTTGTTTTCGTC--GCGACGCCTC-TAAACTGACA----AAACAT
dp5 XR_group8:924081-924331 + CTTCGAGGAGAAGCCGCTCCACGTGCCCCCATTGCCGGAGCTGCAGAATGGTGAGCGA-----CGGGG-----------------------------------------------------------------------A---------------------------------------------------------------------------------------------------------GCGGGGAGATCAGATCTTAAAGATAAAGATAC---TACGTGCC---TCCG--------------C--CC----------------GA-TGC-----------------------------------CAT-GTGCAAATGACCTTCA---G-AACTGTGT------CGAACTTTCCA------TAGCCGGTTTT-CTGTAGA-----GTTTTTTT--------TTT----GTTTTCGG-------TTTTCTGTTCTG--------TTTTT-----CTTC-TTTGTTTTCGTC--GCGACGCCTC-TAAACTGACA----AAACAT
droWil2 scf2_1100000004540:2375768-2376018 - TTTCGAGGAGAAGCCTCTGCATGTGCCCCCATTGTCGGAGCTACAAAATGGTGAGTAT-----TTTT------------------------------------------TTA-----------------CTACTATT-------------------------ACTTATTATTATTATTTGGAGGCACTCC------------AAACACACACACACACACACATATACATAGATACAAGTTGCGAGCG-------------------------------------------------------------------------------------------------------------------------------GGCCAAATGACCTTCA--AG-AGCTCTT-----------TTTCCCATAAAGCTAGCCGGTTTT-TGTTGTTTTTT--------T--------TT----------------------------------------TTTTTTT--GGCTC-TCTGTTTTTATTCTAAGCA---------------ACCG-AAACAT
droVir3 scaffold_13049:2691451-2691680 + dvi_18100 CTTCGAGGAGAAGCCGCTGCATGTGCCAACGCTGGAGGAACTGCAGCAGGGTAAGCGG-----AGCT--------------------------------------ACT---------GCAGCAGTAAAA--------TGAACG-----------A----------------------------------------------G-------------------------------TTGCAGTA----GCCGTAGCA-----------------------------------GTAGCAGTAGAAT----CAG----CA---------GCAGCA----GC---------------------------------A--ACAGAGCAAATGACCTTCA--CA-AACTGTGC------CGAACTTTCCA------TAGCCGGTTTT-TTTTTTTTTTTTT----------------------TTTTTGAG-------G-CCG--TTCTCTTGGCGTGTTCT-----------TATGCTTT-------------------------------------
droMoj3 scaffold_6654:1195974-1196212 - CTTCGAGGAGAAGCCACTGCATGTGCCCACACTGGAGGAACTGCAGCAAGGTAAATTTAAAGAGGGGGAACAGTAGCATGAGCAGCAGCAGAAGCAGA----------------------------------------------------------------------------------------------------------------------------------------AGCAGCA----GCAGCAGCA-----------------------------------GCAGCAGTAAAATGCTGCAG----CAGAGTGAAACGCAGCA----GC---------------------------------A--ACACATTAAATGACCTTCA--CA-AACTGTGC------CGAACTTTCCA------TAGCCGGTTTT-TTCTT-----------------------TTTC---GT-CGAG-----------------------------GCGTTC--TCTT--TGCGTGTTC------------------------------------
droGri2 scaffold_15110:3683869-3684044 + GTTTGAAGAGAAGCCATTGTATGTGCCCTCGTTGGAAGAGTTGCAGTCAGGTGAGGCG-----AGCA---------------------------------------CT---------TAAACAGT------------TGAACA-----------G----------------------------------------------A-------------------------------TTCCAATC-----------------ACCAGC---ACGACAAC------ACGA-------------------------------------------------AC-----------------------------------T-C-AAGCAAATGACCTTCA--CGCAAGTGTGT------CGAACTTTCCA------TAGCCGGTTTT-CTTGATA-----GGT--------------------------------------------------------GTTTTC----------------------------------------------------T
droAna3 scaffold_13337:6709839-6710129 + CTTCGAGGAGAAGCCTCTGTATGTGCCCCCATTGTCGGAGCTGCAGAATGGTGAGTGT---------------------------------------------------GAATTTCCG-----------CGACAATTTCCCGAGATTTCCCATC------------------------CCGAGAGAGAGA------------TAACATATAGCCATAGATCCATAGCCACTGAA--------------------------------------AAA------ACGTGCCAGCTTCG-------------------------------------GTGC---------------------------------TTCAT-GAGCAAATGACCTTCA---G-AACTGTGC------CGAACTTTCCA------TAGCCGGTTTT-GGTCCGA-----GGTTC---TTACGATT---C-------T--G-------TTTGCTGCTCAG--------TGTTTTTGGTCGTT-TCTGTTTTCATT--GAGCAG-TCT-A-A------ACAC-AAACAT
droBip1 scf7180000396709:441080-441344 + CTTCGAGGAAAAGCCCCTGTATGTGCCCCCATTGTCGGAGCTGCAGAATGGTGAGTGT---------------------------------------------------GAA---------------------------------TTTTCCACATTTCCCA-------------------GAGAGAGAGATACTTGGCGAGATAACATATAGCCAC------------------------------------------------------AGAAA------ACGTGCCAGCTTCG-------------------------------------GTGC---------------------------------TTCAT-GAGCAAATGACCTTCA---G-AACTGTGC------CGAACTTTCCA------TAGCCGGTTTT-GGTCCGA-----GGTTC---TTACGATT---C-------T--G-------TTTGC-----AG--------TGTTTTTGGTCGTT-TCTGTTTTCATT--GAGCAG-TTC-A-A------ACAC-AAACAT
droKik1 scf7180000302329:368051-368319 + CTACGAGGAGAAGCCCCTGCATGTGCCCTCATTGCCGGAGCTGCAGAACGGTGAGCAG-----CGTT------------------------------------------A-----------------------------AGCCGATTTCCCA--G-------------------------------------------------------------------------------------------------------ATCCGCCAGATAACAAT------ACGTGCTGTATT-------------------------------------GAGAGCTCTGTGCTGTGTGCTCTGTTCCGTGTTCTGTGTTCTGGGAGCCGAATGACCTTCA---G-AACTGTGCCATAGCCAAACTTTCCA------TAGCCGGTTTT-CGCTCAGTTCTGT----------------------------T--------------GATTTG--------TGTTTTC--TGATT-TCTGTTTTCATT--GCGCGA-ACT-A-A------ACAC-AAACAT
droFic1 scf7180000454113:880210-880461 + CTTCGAGGAGAAGCCCCTGTATGTGCCCCCATTGTCGGAGCTGCAGAACGGTGAGTTG-----AGAT--------------------------------------TCT--GA---------------------------------GTTCCCACCG-------------------------------------------------------------------------------------------------------ATCCGAGAGATAACAAT------ACGTGCTGTATTCT-----GG-----GGTTCTC----------------GAGTGC-----------------------------------CAT-GTGCAAATGACCTTCA---C-AACGGTGC------CGAACTTTCCA------TAGCCGGTTTT-TGGTCGCTTCTCA----------------------GTACTGAG-------TTCTACGTTCTT--------TATTTTC--TATTT-TTTGTTTTCATT--GAGCAG-TCC-AAA------ACAG-AAACAT
droEle1 scf7180000491249:4435351-4435632 + CTTCGAGGAAAAGCCTCTCCATGTGCCCCCATTGTCGGAACTGCAGAAAGGTGAGTTC-----AATC----------------------TGAAGCTGAAGCTGAAGCT--GA---------------------------------TTTCCCACAG-------------------------------------------------------------------------------------------------------ATCCGACAGATTACTATACAAATACGTGCCATATTCG--------------C--GC----------------GAGTGC-----------------------------------CAT-GTGCAAATGACCTTCA--AG-AACGGTGC------CGAACTTTCCA------TAGCCGGTTTTTCGGTCGGTTCTGC-------TGCCGTTT---CAGTGTAGTGTT-------TTTTCTGTTTTC--------TGTTGTT--TGTTT-GCTGTTCTCATT--GAGCAG-TCC-AAA------ACAG-AAACAT
droRho1 scf7180000779696:163297-163556 + CTTCGAGGAGAAGCCTCTTTATGTGCCCCCATTGTCGGAACTGCAGAACGGTGAGCCA-----AGCT-----------------------------------GACTCT--GA---------------------------------TTTCCAAGAG-------------------------------------------------------------------------------------------------------ATCCGCGAGATAACAAT------ACGTGCCATATTCG--------------CT-CC----------------GAGTGC-----------------------------------CAT-GTGCAAATGACCTTCA--AA-AACGGTGC------CGAACTTTCCA------TAGCCGGTTTT-CGGTCGGTTCTG----------ACGTTT---CATTGTACTGTG-------TACTGTGTTTTG--------TGTTTGG--CGTTT-TCTGTTTTCATT--GAGCAG-TCC-AAA------ACAG-AAACAT
droBia1 scf7180000300910:1303736-1303987 - CTTCGAGGAGAAGCCGCTGTACGTGCCCCCATTGTCGGAGCTGCAGAACGGTGAGTGC-----C----------------------------------------------GA---------------------------------GTTCCCAGAGGTTCCAGACTCGAGATTCTAG----------------------------------------------------------------A----GCCGAGACCCGCGATCCCAGAGATAACAAT------ACGTGCCGTTTGGG--------------CCCCC----------------GA--GG-----------------------------------CGT-GTGCAAATGACCTTCAGAAG-AACAGTGC------CGAACTTTCCA------TAGCCGGTTTT-GGGTCGGTACTG------------------------------------------------------------TTTTT---A-TT-TCGGTTTTCATT--GAGCAA-TCC-AAA------GCA--AAACAT
droTak1 scf7180000414671:151664-151921 - CTTCGAGGAGAAGCCACTGTATGTGCCCCCATTGTCGGAGTTGCAGAAAGGTGAGTTC-----------------------------------------------TCA--GA---------------------------------GTTCCCAGAG-------ACTTGGGATTCTAGCTT-------------------------------------------------------------A----ACAG-------AGATCCCAGAGATAACAAT------ACGT-------------------------------------------------GC-----------------------------------CATATAGCAAATGACCTTCAGAAG-AACGGTGC------CGAACTTTCCA------TAGCCGGTTTTTCGGTTGGTTCTAG----------------------GTTTTTT-----ATGTTTTGTGTTTTG--------CGTTTGG--AGTTTCTCTGTTTTCATT--GAGCAA-TCC-AAA------ACACTAAACAT
droEug1 scf7180000409007:27781-28033 - CTTCGAGGAGAAGCCGCTCTACGTGCCCCCATTGTCGGAGCTACAGAACGGTGAGCCG-----AGCT------------------------------------------GAG---------------------------------TTTCCCACAGATCCCA----------------------------------------------------------------------------------------------CAGATCTGAGAGATAACAAT------ACGTGCAATATTCG--------------C--CC----------------GAGTGC-----------------------------------CAT-GTGCAAATGACCTTCA---G-AACAGTGC------CGAACTTTCCA------TAGCCGGTTTT-TGGTCGGTTCTCT----------------------GTTCTCAG-------TACTGAGTTCTG--------TGTTTTT--TGCTT-TTTGTTTTCATT--GAGCTG-TCC-GAA------ACAG-AAACAT
dm3 chr3L:1204382-1204604 - CTTCGAGGAGAAGCCGCTGTACGTGCCCCCATTGTCAGAGTTGCAGAACGGTGAGTCG-----AGTT------------------------------------------GGA---------------------------------TTTCCCAGCG-------------------------------------------------------------------------------------------------------ATCCCGCAGATAACAAT------ACGT-------------------------------------------------GC-----------------------------------CAT-GTGCAAATGACCTTCAGCAG-AACGGTGC------CGAACTTTCCA------CAGCCGGTTTT-CGGTGGGTTCTAC-------------------------------------------GTTCTG--------TGTTTTT--TGTTT-GCTGTTTTCATT--GAGCAAATCT-CAAACAGAAACAG-AAACAT
droSim2 3l:1135054-1135283 - CTTCGAGGAGAAGCCGCTGTACGTGCCCCCATTGTCGGAGTTACAGAACGGTGAGTCG-----AGTT------------------------------------------GGA---------------------------------TTTCCCAGAG-------------------------------------------------------------------------------------------------------ATCCCACAGATAACAAT------ACGT-------------------------------------------------GC-----------------------------------CAT-GTGCAAATGACCTTCAGCAG-AACGGTGC------CGAACTTTCCA------CAGCCGGTTTT-CGGTGGGTTCTGC----------------------GCTCTGTG-------TTTTT---------------TGTTTTG--TGCTT-GCTGTTTTCATT--GAGCAAATCC-CAAACAGAAACAG-AAACAT
droSec2 scaffold_2:1197110-1197339 - CTTCGAGGAGAAGCCGCTGTACGTGCCCCCATTGTCGGAGCTACAGAACGGTGAGTCG-----AGTT------------------------------------------GGA---------------------------------TTTCCCAGCG-------------------------------------------------------------------------------------------------------ATCCCACAGATAACAAT------ACGT-------------------------------------------------GC-----------------------------------CAT-GTGCAAATGACCTTCAGCAG-AACGGTGC------CGAACTTTCCA------CAGCCGGTTTT-TGGTGGGTTCTGC----------------------GCTCTGTG-------A-TTT---------------TGTTTTC--TGCTT-GCTGTTTTCATT--GAGCAAATCCCAAAACAGAAACAG-AAACAT
droYak3 3L:1169218-1169465 - CTTCGAGGAGAAGCCGCTGTACGTGCCCCCATTGTCGGAGCTGCAGAACGGTGAGCCG-----AGTT--------------------------------------GCTTGGA---------------------------------TTTCCCAGCG-------------------------------------------------------------------------------------------------------ATCCCAGAGATAACAAT------ACGT-------------------------------------------------GC-----------------------------------CAT-GTGCAAATGACCTTCAGCAG-AACGGTGC------CGAACTTTCCA------CAGCCGGTTTT-CGGTCACTTCTGC----------------------GTTCTATGTTCTGTGTTTTCTGTTTTG--------TGATTGC--CATTT-GCTGTTTTCATT--GAGCAGATCC-CAAACAGAAACAG-AAACAT
droEre2 scaffold_1383:511-738 - CTTCGAGGAGAAGCCGCTGTACGTGCCCCCATTGTCGGAGCTACAGAACGGTGAGCCG-----CCTT------------------------------------------GGG----------------------------------TTCCCAGCG-------------------------------------------------------------------------------------------------------ATCCCACAGATAACAAT------ACGT-------------------------------------------------GC-----------------------------------CAT-GTGCAAATGACCTTCAGCGG-AACGCT-C------CGAACTTTCCA------CAGCCGGTTTT-CGGTGGCTTCTCC----------------------GCTCTGCG-------TTCTGCGTTCTG--------TGTTCTA--TGTTT-GCTGTTTTCATT--GAGCAG-CCC-CAA------ACAG-AAACAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
CTTCGAGGAGAAGCCGCTCCACGTGCCCCCATTGCCGGAGCTGCAGAATGGTGAGCGA-----CGGGG-----------------------------------------------------------------------A---------------------------------------------------------------------------------------------------------GCGGGGAGATCAGATCTTAAAGATAAAGATAC---TACGTGCC---TCCG--------------C--CC----------------GA-TGC-----------------------------------CAT-GTGCAAATGACCTTCA---G-AACTGTGT------CGAACTTTCCA------TAGCCGGTTTT-CTTTAGA-----GTTTTTTT--------TTT----GTTTTCGG-------TTTTCTGTTCTG--------TTTTT-----CTTC-TTTGTTTTCGTC--GCGACGCCTC-TAAACTGACA----AAACATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................CCACGTGCCCCCATTGCCGGAGCTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
...................CACGTGCCCCCATTGCCGGAGCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
dp5
CTTCGAGGAGAAGCCGCTCCACGTGCCCCCATTGCCGGAGCTGCAGAATGGTGAGCGA-----CGGGG-----------------------------------------------------------------------A---------------------------------------------------------------------------------------------------------GCGGGGAGATCAGATCTTAAAGATAAAGATAC---TACGTGCC---TCCG--------------C--CC----------------GA-TGC-----------------------------------CAT-GTGCAAATGACCTTCA---G-AACTGTGT------CGAACTTTCCA------TAGCCGGTTTT-CTGTAGA-----GTTTTTTT--------TTT----GTTTTCGG-------TTTTCTGTTCTG--------TTTTT-----CTTC-TTTGTTTTCGTC--GCGACGCCTC-TAAACTGACA----AAACATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................CCACGTGCCCCCATTGCCGGAGCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
..................CCACGTGCCCCCATTGCCGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.................TCCACGTGCCCCCATTGCCGGAGCTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
..........................CCCCATTGCCGGAGCTGCAGAATGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
..................CCACGTGCCCCCATTGCCGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..................CCACGTGCCCCCATTGCCGGAGCTGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
..................CCACGTGCCCCCATTGCCGGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
...................................CGGAGCTGCAGAATGGTGAGCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
................................................TGGTGAGCGA-----CGGGG-----------------------------------------------------------------------A---------------------------------------------------------------------------------------------------------GCGG................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..................CCACGTGCCCCCATTGCCGGAGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100000
..............................ATTGCCGGAGCTGCAGAATGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
............................CCATTGCCGGAGCTGCAGAATGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.................................GCCGGAGCTGCAGAATGTCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20120.0810100000000
droWil2
TTTCGAGGAGAAGCCTCTGCATGTGCCCCCATTGTCGGAGCTACAAAATGGTGAGTAT-----TTTT------------------------------------------TTA-----------------CTACTATT-------------------------ACTTATTATTATTATTTGGAGGCACTCC------------AAACACACACACACACACACATATACATAGATACAAGTTGCGAGCG-------------------------------------------------------------------------------------------------------------------------------GGCCAAATGACCTTCA--AG-AGCTCTT-----------TTTCCCATAAAGCTAGCCGGTTTT-TGTTGTTTTTT--------T--------TT----------------------------------------TTTTTTT--GGCTC-TCTGTTTTTATTCTAAGCA---------------ACCG-AAACATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................GTGCCCCCATTGTCGGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00220000
..............CTCTGCATGTGCCCCCATTGTCGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
............................CCATTGTCGGAGCTACAAAATGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
...........................CCCATTGTCGGAGCTACAAAATGGTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100
.................TGCATGTGCCCCCATTGTCGGAGCTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
...CGAGGAGAAGCCTCTGCATGTGCCCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
droVir3
CTTCGAGGAGAAGCCGCTGCATGTGCCAACGCTGGAGGAACTGCAGCAGGGTAAGCGG-----AGCT--------------------------------------ACT---------GCAGCAGTAAAA--------TGAACG-----------A----------------------------------------------G-------------------------------TTGCAGTA----GCCGTAGCA-----------------------------------GTAGCAGTAGAAT----CAG----CA---------GCAGCA----GC---------------------------------A--ACAGAGCAAATGACCTTCA--CA-AACTGTGC------CGAACTTTCCA------TAGCCGGTTTT-TTTTTTTTTTTTT----------------------TTTTTGAG-------G-CCG--TTCTCTTGGCGTGTTCT-----------TATGCTTT-------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................ACGCTGGAGGAACTGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000000000010000000010000000000000000000000000000000000000000000
......................GTGCCAACGCTGGAGGAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002000000000000000000000100000001000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................GCA----GC---------------------------------A--ACAGAGCAAATGAC.......................................................................................................................................................................................2012.002000000000000000000000000000000000200000000000000000000000000000
......................GTGCCAACGCTGGAGGAACTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
...CGAGGAGAAGCCGCTGCATGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
........................GCCAACGCTGGAGGAACTGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................CTGTGC------CGAACTTTCCA------TAGCC.........................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
........................GCCAACGCTGGAGGAACTGCAGCAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000001000000000000000000000000000000000
.........GAAGCCGCTGCATGTGCCAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000100000000000000000000000000000000000000000
...CGAGGAGAAGCCGCTGCATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
.......................................ACTGCAGCAGGGTAAGCGG-----..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.501001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................AAT----CAG----CA---------GCAGCA----GC---------------------------------A--AC...................................................................................................................................................................................................19100.101000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................AT----CAG----CA---------GCAGCA----GC---------------------------------A--ACA..................................................................................................................................................................................................19200.051000000000000000000000000000000000001000000000000000000000000000
droMoj3
CTTCGAGGAGAAGCCACTGCATGTGCCCACACTGGAGGAACTGCAGCAAGGTAAATTTAAAGAGGGGGAACAGTAGCATGAGCAGCAGCAGAAGCAGA----------------------------------------------------------------------------------------------------------------------------------------AGCAGCA----GCAGCAGCA-----------------------------------GCAGCAGTAAAATGCTGCAG----CAGAGTGAAACGCAGCA----GC---------------------------------A--ACACATTAAATGACCTTCA--CA-AACTGTGC------CGAACTTTCCA------TAGCCGGTTTT-TTCTT-----------------------TTTC---GT-CGAG-----------------------------GCGTTC--TCTT--TGCGTGTTC------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................CACACTGGAGGAACTGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002200000
........................GCCCACACTGGAGGAACTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
.............................CACTGGAGGAACTGCAGCAAGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
...CGAGGAGAAGCCACTGCATGTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
...............ACTGCATGTGCCCACACTGGAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
...........AGCCACTGCATGTGCCCACACTGGAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.........................CCCACACTGGAGGAACTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
droGri2
GTTTGAAGAGAAGCCATTGTATGTGCCCTCGTTGGAAGAGTTGCAGTCAGGTGAGGCG-----AGCA---------------------------------------CT---------TAAACAGT------------TGAACA-----------G----------------------------------------------A-------------------------------TTCCAATC-----------------ACCAGC---ACGACAAC------ACGA-------------------------------------------------AC-----------------------------------T-C-AAGCAAATGACCTTCA--CGCAAGTGTGT------CGAACTTTCCA------TAGCCGGTTTT-CTTGATA-----GGT--------------------------------------------------------GTTTTC----------------------------------------------------TSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.......................................GTTGCAGTCAGGTGAGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110
droAna3
CTTCGAGGAGAAGCCTCTGTATGTGCCCCCATTGTCGGAGCTGCAGAATGGTGAGTGT---------------------------------------------------GAATTTCCG-----------CGACAATTTCCCGAGATTTCCCATC------------------------CCGAGAGAGAGA------------TAACATATAGCCATAGATCCATAGCCACTGAA--------------------------------------AAA------ACGTGCCAGCTTCG-------------------------------------GTGC---------------------------------TTCAT-GAGCAAATGACCTTCA---G-AACTGTGC------CGAACTTTCCA------TAGCCGGTTTT-GGTCCGA-----GGTTC---TTACGATT---C-------T--G-------TTTGCTGCTCAG--------TGTTTTTGGTCGTT-TCTGTTTTCATT--GAGCAG-TCT-A-A------ACAC-AAACATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
CTTCGAGGAGAAGCCTCTGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.003200100
..................GTATGTGCCCCCATTGTCGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
....................ATGTGCCCCCATTGTCGGAGCTGCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
......................GTGCCCCCATTGTCGGAGCTGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
................CTGTATGTGCCCCCATTGTCGGAGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000010
CTTCGAGGAGAAGCCTCTGTATGTGCCCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001010000
........................GCCCCCATTGTCGGAGCTGCAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
..................GTATGTGCCCCCATTGTCGGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
....................ATGTGCCCCCATTGTCGGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.....................................GAGCTGCAGAATGGTGAGTGT---------------------------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
..........................CCCCATTGTCGGAGCTGCAGAATGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000010
..........................................GCAGAATGGTGAGTGT---------------------------------------------------GA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000010
....................ATGTGCCCCCATTGTCGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
..................GTATGTGCCCCCATTGTCGGAGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
................CTGTATGTGCCCCCATTGTCGGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
....................ATGTGCCCCCATTGTCGGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
droBip1
CTTCGAGGAAAAGCCCCTGTATGTGCCCCCATTGTCGGAGCTGCAGAATGGTGAGTGT---------------------------------------------------GAA---------------------------------TTTTCCACATTTCCCA-------------------GAGAGAGAGATACTTGGCGAGATAACATATAGCCAC------------------------------------------------------AGAAA------ACGTGCCAGCTTCG-------------------------------------GTGC---------------------------------TTCAT-GAGCAAATGACCTTCA---G-AACTGTGC------CGAACTTTCCA------TAGCCGGTTTT-GGTCCGA-----GGTTC---TTACGATT---C-------T--G-------TTTGC-----AG--------TGTTTTTGGTCGTT-TCTGTTTTCATT--GAGCAG-TTC-A-A------ACAC-AAACATSizeHit CountTotal NormTotal
No Reads
droKik1
CTACGAGGAGAAGCCCCTGCATGTGCCCTCATTGCCGGAGCTGCAGAACGGTGAGCAG-----CGTT------------------------------------------A-----------------------------AGCCGATTTCCCA--G-------------------------------------------------------------------------------------------------------ATCCGCCAGATAACAAT------ACGTGCTGTATT-------------------------------------GAGAGCTCTGTGCTGTGTGCTCTGTTCCGTGTTCTGTGTTCTGGGAGCCGAATGACCTTCA---G-AACTGTGCCATAGCCAAACTTTCCA------TAGCCGGTTTT-CGCTCAGTTCTGT----------------------------T--------------GATTTG--------TGTTTTC--TGATT-TCTGTTTTCATT--GCGCGA-ACT-A-A------ACAC-AAACATSizeHit CountTotal NormTotal
No Reads
droFic1
CTTCGAGGAGAAGCCCCTGTATGTGCCCCCATTGTCGGAGCTGCAGAACGGTGAGTTG-----AGAT--------------------------------------TCT--GA---------------------------------GTTCCCACCG-------------------------------------------------------------------------------------------------------ATCCGAGAGATAACAAT------ACGTGCTGTATTCT-----GG-----GGTTCTC----------------GAGTGC-----------------------------------CAT-GTGCAAATGACCTTCA---C-AACGGTGC------CGAACTTTCCA------TAGCCGGTTTT-TGGTCGCTTCTCA----------------------GTACTGAG-------TTCTACGTTCTT--------TATTTTC--TATTT-TTTGTTTTCATT--GAGCAG-TCC-AAA------ACAG-AAACATSizeHit CountTotal NormTotal
No Reads
droEle1
CTTCGAGGAAAAGCCTCTCCATGTGCCCCCATTGTCGGAACTGCAGAAAGGTGAGTTC-----AATC----------------------TGAAGCTGAAGCTGAAGCT--GA---------------------------------TTTCCCACAG-------------------------------------------------------------------------------------------------------ATCCGACAGATTACTATACAAATACGTGCCATATTCG--------------C--GC----------------GAGTGC-----------------------------------CAT-GTGCAAATGACCTTCA--AG-AACGGTGC------CGAACTTTCCA------TAGCCGGTTTTTCGGTCGGTTCTGC-------TGCCGTTT---CAGTGTAGTGTT-------TTTTCTGTTTTC--------TGTTGTT--TGTTT-GCTGTTCTCATT--GAGCAG-TCC-AAA------ACAG-AAACATSizeHit CountTotal NormTotal
No Reads
droRho1
CTTCGAGGAGAAGCCTCTTTATGTGCCCCCATTGTCGGAACTGCAGAACGGTGAGCCA-----AGCT-----------------------------------GACTCT--GA---------------------------------TTTCCAAGAG-------------------------------------------------------------------------------------------------------ATCCGCGAGATAACAAT------ACGTGCCATATTCG--------------CT-CC----------------GAGTGC-----------------------------------CAT-GTGCAAATGACCTTCA--AA-AACGGTGC------CGAACTTTCCA------TAGCCGGTTTT-CGGTCGGTTCTG----------ACGTTT---CATTGTACTGTG-------TACTGTGTTTTG--------TGTTTGG--CGTTT-TCTGTTTTCATT--GAGCAG-TCC-AAA------ACAG-AAACATSizeHit CountTotal NormTotal
No Reads
droBia1
CTTCGAGGAGAAGCCGCTGTACGTGCCCCCATTGTCGGAGCTGCAGAACGGTGAGTGC-----C----------------------------------------------GA---------------------------------GTTCCCAGAGGTTCCAGACTCGAGATTCTAG----------------------------------------------------------------A----GCCGAGACCCGCGATCCCAGAGATAACAAT------ACGTGCCGTTTGGG--------------CCCCC----------------GA--GG-----------------------------------CGT-GTGCAAATGACCTTCAGAAG-AACAGTGC------CGAACTTTCCA------TAGCCGGTTTT-GGGTCGGTACTG------------------------------------------------------------TTTTT---A-TT-TCGGTTTTCATT--GAGCAA-TCC-AAA------GCA--AAACATSizeHit CountTotal NormTotal
No Reads
droTak1
CTTCGAGGAGAAGCCACTGTATGTGCCCCCATTGTCGGAGTTGCAGAAAGGTGAGTTC-----------------------------------------------TCA--GA---------------------------------GTTCCCAGAG-------ACTTGGGATTCTAGCTT-------------------------------------------------------------A----ACAG-------AGATCCCAGAGATAACAAT------ACGT-------------------------------------------------GC-----------------------------------CATATAGCAAATGACCTTCAGAAG-AACGGTGC------CGAACTTTCCA------TAGCCGGTTTTTCGGTTGGTTCTAG----------------------GTTTTTT-----ATGTTTTGTGTTTTG--------CGTTTGG--AGTTTCTCTGTTTTCATT--GAGCAA-TCC-AAA------ACACTAAACATSizeHit CountTotal NormTotal
No Reads
droEug1
CTTCGAGGAGAAGCCGCTCTACGTGCCCCCATTGTCGGAGCTACAGAACGGTGAGCCG-----AGCT------------------------------------------GAG---------------------------------TTTCCCACAGATCCCA----------------------------------------------------------------------------------------------CAGATCTGAGAGATAACAAT------ACGTGCAATATTCG--------------C--CC----------------GAGTGC-----------------------------------CAT-GTGCAAATGACCTTCA---G-AACAGTGC------CGAACTTTCCA------TAGCCGGTTTT-TGGTCGGTTCTCT----------------------GTTCTCAG-------TACTGAGTTCTG--------TGTTTTT--TGCTT-TTTGTTTTCATT--GAGCTG-TCC-GAA------ACAG-AAACATSizeHit CountTotal NormTotal
No Reads
dm3
CTTCGAGGAGAAGCCGCTGTACGTGCCCCCATTGTCAGAGTTGCAGAACGGTGAGTCG-----AGTT------------------------------------------GGA---------------------------------TTTCCCAGCG-------------------------------------------------------------------------------------------------------ATCCCGCAGATAACAAT------ACGT-------------------------------------------------GC-----------------------------------CAT-GTGCAAATGACCTTCAGCAG-AACGGTGC------CGAACTTTCCA------CAGCCGGTTTT-CGGTGGGTTCTAC-------------------------------------------GTTCTG--------TGTTTTT--TGTTT-GCTGTTTTCATT--GAGCAAATCT-CAAACAGAAACAG-AAACATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
CTTCGAGGAGAAGCCGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1818.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................CAT-GTGCAAATGACCTTCAG.................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GGAGAAGCCGCTGTACGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................GTCG-----AGTT------------------------------------------GGA---------------------------------TTTCCCAG................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTT-GCTGTTTTCATT--GAG............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
................................................CGGTGAGTCG-----AGTT------------------------------------------GGA---------------------------------TTTCCC..................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
............................................................................................................................................................................................................................................................................TAACAAT------ACGT-------------------------------------------------GC-----------------------------------CAT-GTGCAAAT..........................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AGAAGCCGCTGTACGTGCCCCCATTGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...................TACGTGCCCCCATTGTCAGAGTTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAC-------------------------------------------GTTCTG--------TGTTTTT--TGTTT-GCTGT........................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................TTTCCCAGCG-------------------------------------------------------------------------------------------------------ATCCCGCAGAT............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................AACGGTGAGTCG-----AGTT------------------------------------------GGA---------------------------------T.......................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....AGGAGAAGCCGCTGTACGTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAC-------------------------------------------GTTCTG--------TGTTTTT--TGTTT-GCT..........................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.TTCGAGGAGAAGCCGCTGTACGTGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.............................CATTGTCAGAGTTGCAGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...........AGCCGCTGTACGTGCCCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TTGTCAGAGTTGCAGAACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CGCTGTACGTGCCCCCATTGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AGAAGCCGCTGTACGTGCCCCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................GAGTCG-----AGTT------------------------------------------GGA---------------------------------TC......................................................................................................................................................................................................................................................................................................................................................................................................................................15120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CTTCGAGGAGAAGCCGCTGTACGTGCCCCCATTGTCGGAGTTACAGAACGGTGAGTCG-----AGTT------------------------------------------GGA---------------------------------TTTCCCAGAG-------------------------------------------------------------------------------------------------------ATCCCACAGATAACAAT------ACGT-------------------------------------------------GC-----------------------------------CAT-GTGCAAATGACCTTCAGCAG-AACGGTGC------CGAACTTTCCA------CAGCCGGTTTT-CGGTGGGTTCTGC----------------------GCTCTGTG-------TTTTT---------------TGTTTTG--TGCTT-GCTGTTTTCATT--GAGCAAATCC-CAAACAGAAACAG-AAACATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................TTGTCGGAGTTACAGAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00202000000000000000
..............................ATTGTCGGAGTTACAGAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00201100000000000000
....................ACGTGCCCCCATTGTCGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00202000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................TGCAAATGACCTTCAGCAG-AACG.........................................................................................................................................................................2311.00100000100000000000
........................................................................................................................................................................................................................................................................................................................................................................................................CAG-AACGGTGC------CGAACTTTCC.....................................................................................................................................................2111.00101000000000000000
...........AGCCGCTGTACGTGCCCCCATTGTCGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................AACGGTGC------CGAACTTTCCA------C.............................................................................................................................................2011.00101000000000000000
..................GTACGTGCCCCCATTGTCGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
....GAGGAGAAGCCGCTGTACGTGCCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................ATGACCTTCAGCAG-AACGGTGC------CGAAC..........................................................................................................................................................2711.00100100000000000000
..................GTACGTGCCCCCATTGTCGGAGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
droSec2
CTTCGAGGAGAAGCCGCTGTACGTGCCCCCATTGTCGGAGCTACAGAACGGTGAGTCG-----AGTT------------------------------------------GGA---------------------------------TTTCCCAGCG-------------------------------------------------------------------------------------------------------ATCCCACAGATAACAAT------ACGT-------------------------------------------------GC-----------------------------------CAT-GTGCAAATGACCTTCAGCAG-AACGGTGC------CGAACTTTCCA------CAGCCGGTTTT-TGGTGGGTTCTGC----------------------GCTCTGTG-------A-TTT---------------TGTTTTC--TGCTT-GCTGTTTTCATT--GAGCAAATCCCAAAACAGAAACAG-AAACATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................CCATTGTCGGAGCTACAGAACGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0021100
..............CGCTGTACGTGCCCCCATTGTCGGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020020
...........................CCCATTGTCGGAGCTACAGAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020011
CTTCGAGGAGAAGCCGCTGTACGTGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020020
...................................CGGAGCTACAGAACGGTGAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTT---------------TGTTTTC--TGCTT-GCTGTT.......................................2111.0010010
..............................ATTGTCGGAGCTACAGAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................T-TGGTGGGTTCTGC----------------------GCTCTGT........................................................................................2111.0011000
....................................................................................................................................................................................................................................................................................................................................................................................AT-GTGCAAATGACCTTCAGC................................................................................................................................................................................2011.0011000
..TCGAGGAGAAGCCGCTGTACG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
................................................CGGTGAGTCG-----AGTT------------------------------------------GGA---------------------------------TTTC....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
..............................ATTGTCGGAGCTACAGAACGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
.................TGTACGTGCCCCCATTGTCGGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
.............................CATTGTCGGAGCTACAGAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001
............................CCATTGTCGGAGCTACAGAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
....................ACGTGCCCCCATTGTCGGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
CTTCGAGGAGAAGCCGCTGTACGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100
....................ACGTGCCCCCATTGTCGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
....................ACGTGCCCCCATTGTCGGAGCTACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
..TCGAGGAGAAGCCGCTGTACGTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
..........................................ACAGAACGGTGAGTCG-----AGTT------------------------------------------G...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
................................TGTCGGAGCTACAGAACGGTGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
CTTCGAGGAGAAGCCGCTGTACGTGCCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100
........................GCCCCCATTGTCGGAGCTACAGAACGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100
...........AGCCGCTGTACGTGCCCCCATTGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
droYak3
CTTCGAGGAGAAGCCGCTGTACGTGCCCCCATTGTCGGAGCTGCAGAACGGTGAGCCG-----AGTT--------------------------------------GCTTGGA---------------------------------TTTCCCAGCG-------------------------------------------------------------------------------------------------------ATCCCAGAGATAACAAT------ACGT-------------------------------------------------GC-----------------------------------CAT-GTGCAAATGACCTTCAGCAG-AACGGTGC------CGAACTTTCCA------CAGCCGGTTTT-CGGTCACTTCTGC----------------------GTTCTATGTTCTGTGTTTTCTGTTTTG--------TGATTGC--CATTT-GCTGTTTTCATT--GAGCAGATCC-CAAACAGAAACAG-AAACATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................GTGCCCCCATTGTCGGAGCTGCAGAACGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29113.0013000000000013
.....................CGTGCCCCCATTGTCGGAGCTGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
...CGAGGAGAAGCCGCTGTACGTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
CTTCGAGGAGAAGCCGCTGTACGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000
...............................TTGTCGGAGCTGCAGAACGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGC----------------------GTTCTATGTTCTGTGTTTTCTGT........................................................................2711.00100000010000
CTTCGAGGAGAAGCCGCTGTACGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
CTTCGAGGAGAAGCCGCTGTAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
..................GTACGTGCCCCCATTGTCGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000
.......GAGAAGCCGCTGTACGTGCCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
....................ACGTGCCCCCATTGTCGGAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000
..................GTACGTGCCCCCATTGTCGGAGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGATCC-CAAACAGAAACAG-A.....2111.00100100000000
.......GAGAAGCCGCTGTACGTGCCCCCATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
..................GTACGTGCCCCCATTGTCGGAGCTGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000
..............................ATTGTCGGAGCTGCAGAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
...............GCTGTACGTGCCCCCATTGTCGGAGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
.........................................TGCAGAACGGTGAGCCG-----AGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.....................CGTGCCCCCATTGTCGGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATT--GAGCAGATCC-CAAACAGA............2211.00100000010000
droEre2
CTTCGAGGAGAAGCCGCTGTACGTGCCCCCATTGTCGGAGCTACAGAACGGTGAGCCG-----CCTT------------------------------------------GGG----------------------------------TTCCCAGCG-------------------------------------------------------------------------------------------------------ATCCCACAGATAACAAT------ACGT-------------------------------------------------GC-----------------------------------CAT-GTGCAAATGACCTTCAGCGG-AACGCT-C------CGAACTTTCCA------CAGCCGGTTTT-CGGTGGCTTCTCC----------------------GCTCTGCG-------TTCTGCGTTCTG--------TGTTCTA--TGTTT-GCTGTTTTCATT--GAGCAG-CCC-CAA------ACAG-AAACATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................GTACGTGCCCCCATTGTCGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2122.0040001120
....................ACGTGCCCCCATTGTCGGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2121.5030200010
CTTCGAGGAGAAGCCGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1821.5030100020
..................GTACGTGCCCCCATTGTCGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2021.5031002000
CTTCGAGGAGAAGCCGCTGTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2121.0020001010
..............................ATTGTCGGAGCTACAGAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1921.0020100010
........AGAAGCCGCTGTACGTGCCCCCATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2521.0020000110
..................GTACGTGCCCCCATTGTCGGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2221.0020001010
..................GTACGTGCCCCCATTGTCGGAGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2421.0020100100
...........AGCCGCTGTACGTGCCCCCATTGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2521.0020100100
...............GCTGTACGTGCCCCCATTGTCGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2321.0022000000
.TTCGAGGAGAAGCCGCTGTACGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2321.0021000010
..................GTACGTGCCCCCATTGTCGGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2321.0020002000
CTTCGAGGAGAAGCCGCTGTACGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.5010001000
...............GCTGTACGTGCCCCCATTGTCGGAGCTAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2920.5010100000
......GGAGAAGCCGCTGTACGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5011000000
...........................................................................................................................................................................................................................................................................................GT-------------------------------------------------GC-----------------------------------CAT-GTGCAAATGACCTTCAGC................................................................................................................................................................................2520.5010100000
....GAGGAGAAGCCGCTGTACGTGCCCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.5010001000
..........................CCCCATTGTCGGAGCTACAGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.5010000010
........................................CTACAGAACGGTGAGCCG-----CCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000010
....................ACGTGCCCCCATTGTCGGAGCTACAGAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2920.5010000100
...CGAGGAGAAGCCGCTGTACGTGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.5010001000
......................................AGCTACAGAACGGTGAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000010
........AGAAGCCGCTGTACGTGCCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010000100
..............CGCTGTACGTGCCCCCATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010100000
..............CGCTGTACGTGCCCCCATTGTCGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.5010000010
.......................................GCTACAGAACGGTGAGCCG-----CCTT------------------------------------------GG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.5010000100
.............................CATTGTCGGAGCTACAGAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010000100
..............................ATTGTCGGAGCTACAGAACGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000010
............GCCGCTGTACGTGCCCCCATTGTCGGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2920.5010001000
.TTCGAGGAGAAGCCGCTGTAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5011000000
CTTCGAGGAGAAGCCGCTGTACG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.5011000000
..................GTACGTGCCCCCATTGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000010
........AGAAGCCGCTGTACGTGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000100
....GAGGAGAAGCCGCTGTACGTGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.5010001000
........AGAAGCCGCTGTACGTGCCCCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.5010100000
....................ACGTGCCCCCATTGTCGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCC----------------------GCTCTGCG-------TTCTGCGTTC......................................................................2120.5011000000
.................TGTACGTGCCCCCATTGTCGGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.5010001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCGTTCTG--------TGTTCTA--TGTTT-GCT..........................................2520.5010000100
.................TGTACGTGCCCCCATTGTCGGAGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.5010001000
......................................AGCTACAGAACGGTGAGCCG-----C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000010
..TCGAGGAGAAGCCGCTGTACGTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.5010000010
.TTCGAGGAGAAGCCGCTGTACGTGCCCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2820.5010100000
...............GCTGTACGTGCCCCCATTGTCGGAGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.5010000010
.......................TGCCCCCATTGTCGGAGCTACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.5011000000
..................GTACGTGCCCCCATTGTCGGAGCTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.5010000100
........................GCCCCCATTGTCGGAGCTACAGAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.5010000010
............................CCATTGTCGGAGCTACAGAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000100
...........AGCCGCTGTACGTGCCCCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010100000
........AGAAGCCGCTGTACGTGCCCCCATTGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2820.5010000100
.............................CATTGTCGGAGCTACAGAACGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.5010000010

Generated: 06/08/2015 at 04:14 PM