ID:

dpe_1436

 Coordinate:

scaffold_30:915049-915199 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.9 -8.8 -8.7 -8.3

Flybase annnotation

exon [dper_GLEANR_20388:3]; CDS [Dper\GL18352-cds]; intron [Dper\GL18352-in]

Repeatable elements

NameClassFamilyStrand
G6_DMLINEJockey+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AAAGAAGAACCTGCCTGTTGTGTCCACTGCAAGGGAAACCACGCTGCCTCCTATAAAGGCTGCAACGTATATCAGAAGGCCAAGGAGTTCCATTCACCCAAGCCAAGGCCCATCCCTCATGCTGCAAGTCGCCCTTCACCCAAAGTTGTGCCAAATATCTTATTTGCCAGCACCCTACGTAGTCCCCATCCATCTCCCCAGCAACTGCCCGACACACCCACCACCGCACCGAGTCAAAGCAACTCCAGAAC
*************************************************************************....((.....(((.............(((..(((......)))...)))..........)))...))************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V042
embryo
 V057
head
.........CCTGCCTGCTGTGTCCACTGCA............................................................................................................................................................................................................................ 22 1 1 1.00 1 1 0 0
.........................................................................AGAAGGCCAAGGAGTTCCATTCAC.......................................................................................................................................................... 24 0 1 1.00 1 0 1 0
.............................................................GCAACGTATATCAGAAGGCCAAGG...................................................................................................................................................................... 24 0 1 1.00 1 1 0 0
.........................................................................................................................................................................................................CAACTGCCCGACACACCCAC.............................. 20 0 1 1.00 1 1 0 0
................................................................ACGTATATCAGAAGGCCAAGGAGTT.................................................................................................................................................................. 25 0 1 1.00 1 1 0 0
......................................................................................................GCAAGGCCCATCCCTCATGC................................................................................................................................. 20 1 1 1.00 1 1 0 0
....................................................................................................................TCATGCTGCAAGTCGCCCTTCACCC.............................................................................................................. 25 0 1 1.00 1 1 0 0
...................................................TATAAAGGCTGCAACGTATATCAG................................................................................................................................................................................ 24 0 1 1.00 1 1 0 0
................................................................ACGTATATCAGAAGGCCAAGGA..................................................................................................................................................................... 22 0 1 1.00 1 1 0 0
.......................................................................................................................TGCTGCAAGTCGCCCTTCACCCAAAG.......................................................................................................... 26 0 1 1.00 1 0 1 0
............................................................................................TTCACCCAAGCCAAGGCCCA........................................................................................................................................... 20 0 1 1.00 1 1 0 0
..........................................................................................................................TGCAAGTCGCCCTTCACCCAAA........................................................................................................... 22 0 1 1.00 1 1 0 0
....................................................................................................................................................................................AGTCCCCATCCATCTCCCC.................................................... 19 0 1 1.00 1 1 0 0
....................TGACCACTGCGAGGGAAATC................................................................................................................................................................................................................... 20 3 5 0.20 1 0 0 1

Anti-sense strand reads

TTTCTTCTTGGACGGACAACACAGGTGACGTTCCCTTTGGTGCGACGGAGGATATTTCCGACGTTGCATATAGTCTTCCGGTTCCTCAAGGTAAGTGGGTTCGGTTCCGGGTAGGGAGTACGACGTTCAGCGGGAAGTGGGTTTCAACACGGTTTATAGAATAAACGGTCGTGGGATGCATCAGGGGTAGGTAGAGGGGTCGTTGACGGGCTGTGTGGGTGGTGGCGTGGCTCAGTTTCGTTGAGGTCTTG
**************************************************************************************************************....((.....(((.............(((..(((......)))...)))..........)))...))************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V042
embryo
 M021
embryo
 V057
head
 V111
male body
..........................................................................................................................................GGGTTTCAACACGGTTTATAGAAT......................................................................................... 24 0 1 12.00 12 12 0 0 0 0
.......................................................................................................GTTCCGGGTAGGGAGTACGACGT............................................................................................................................. 23 0 1 8.00 8 7 1 0 0 0
.........................................................................................................................................TGGGTTTCAACACGGTTTATAGAAT......................................................................................... 25 0 1 6.00 6 6 0 0 0 0
......................................................................................................GGTTCCGGGTAGGGAGTACGACGT............................................................................................................................. 24 0 1 6.00 6 6 0 0 0 0
..............................................GGAGGATATTTCCGACGTTGCAT...................................................................................................................................................................................... 23 0 1 4.00 4 4 0 0 0 0
............................................ACGGAGGATATTTCCGACGTTGCAT...................................................................................................................................................................................... 25 0 1 4.00 4 4 0 0 0 0
..............................................GGAGGATATTTCCGACGTTGCATAT.................................................................................................................................................................................... 25 0 1 4.00 4 2 0 2 0 0
...............................................................................................................................................................................................................................GGCGTGGCTCAGTTTCGTTGAGGT.... 24 0 1 3.00 3 2 1 0 0 0
.......................................................................AGTCTTCCGGTTCCTCAAGGTAAGT........................................................................................................................................................... 25 0 1 3.00 3 3 0 0 0 0
...............................................GAGGATATTTCCGACGTTGCATAT.................................................................................................................................................................................... 24 0 1 3.00 3 3 0 0 0 0
........................................................................GTCTTCCGGTTCCTCAAGGTAAGT........................................................................................................................................................... 24 0 1 3.00 3 3 0 0 0 0
...........................................................................................................................................................ATAGAATAAACGGTCGTGGGATGCAT...................................................................... 26 0 1 2.00 2 2 0 0 0 0
............................................................................TCCGGTTCCTCAAGGTAAGTGGGT....................................................................................................................................................... 24 0 1 2.00 2 1 0 1 0 0
..................................................GATATTTCCGACGTTGCATATAGT................................................................................................................................................................................. 24 0 1 2.00 2 2 0 0 0 0
......................................................................................................GGTTCCGGGTAGGGAGTACGACG.............................................................................................................................. 23 0 1 2.00 2 2 0 0 0 0
..........................................................................................................................................GGGTTTCAACACGGTTTATAGAA.......................................................................................... 23 0 1 2.00 2 2 0 0 0 0
........................................................................................................................................................................................................................GGGTGGTGGCGTGGCTCAGTTTCGT.......... 25 0 1 2.00 2 2 0 0 0 0
.........................................................................................................................................................................................GGTAGGTAGAGGGGTCGT................................................ 18 0 1 2.00 2 1 1 0 0 0
.....................................................................ATAGTCTTCCGGTTCCTCAAGGTAAGT........................................................................................................................................................... 27 0 1 2.00 2 2 0 0 0 0
.............................................................................CCGGTTCCTCAAGGTAAGTGGGT....................................................................................................................................................... 23 0 1 2.00 2 0 0 2 0 0
.................................................GGATATTTCCGACGTTGCATATAGT................................................................................................................................................................................. 25 0 1 2.00 2 2 0 0 0 0
.............................................CGGAGGATATTTCCGACGTTGCAT...................................................................................................................................................................................... 24 0 1 2.00 2 2 0 0 0 0
..........................................................................................................................................................................................GTAGGTAGAGGGGTCGTTGAC............................................ 21 0 1 2.00 2 2 0 0 0 0
.....................................................................ATAGTCTTCCGGTTCCTCAAGGT............................................................................................................................................................... 23 0 1 2.00 2 2 0 0 0 0
...................................................ATATTTCCGACGTTGCATATAGT................................................................................................................................................................................. 23 0 1 2.00 2 2 0 0 0 0
..................................................................................................................GGAGTACGACGTTCAGCGGGAAG.................................................................................................................. 23 0 1 2.00 2 2 0 0 0 0
...........................................................................................................................................GGTTTCAACACGGTTTATAGAAT......................................................................................... 23 0 1 2.00 2 2 0 0 0 0
........................................................................................................................................................................................................AGTTGACGGGCTGTGTGGGT............................... 20 1 1 1.00 1 1 0 0 0 0
.......................................................................................................................ACGACGTTCAGCGGGAAGT................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................GTAGGTAGAGGGGTCGTT............................................... 18 0 1 1.00 1 1 0 0 0 0
.TTCTTCTTGGACGGACAACACAGGT................................................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0
...........................................GACGGAGGATATTTCCGACGTTGCAT...................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................................................................TGGCGTGGCTCAGTTTCGTT......... 20 0 1 1.00 1 1 0 0 0 0
................................................................................................GGGTTCGGTTCCGGGTAGGGAGT.................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................CGGTTTATAGAATAAACGGGCGTGGGAT.......................................................................... 28 1 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................................................................................GGTGGTGGCGTGGCTCAGTTTCGT.......... 24 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................CGGGAAGTGGGTTTCAACA...................................................................................................... 19 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................TTATAGAATAAACGGTCGTGGGAT.......................................................................... 24 0 1 1.00 1 0 0 1 0 0
........TGGACGGACAACACAGGTGACGTTCCCT....................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................TCAGCGGGAAGTGGGTTTCAACACGGT.................................................................................................. 27 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................CGGTCGTGGGATGCATCAGGGGT............................................................... 23 0 1 1.00 1 0 1 0 0 0
................................................................TGCATTTAGTCTTCCGGTTCCTCAAGA................................................................................................................................................................ 27 2 1 1.00 1 1 0 0 0 0
.....................................................................ATAGTCTTCCGGTTCCTCAAGG................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0
....................................................................................................................................GGAAGTGGGTTTCAACACGG................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
........................................................................................................TTCCGGGTAGGGAGTACGACGT............................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0
..........................................................................CTTCCGGTTCCTCAAGGTAAGT........................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................................GGGTAGGTAGAGGGGTCGTTGAC............................................ 23 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................GGATGCATCAGGGGTAGG............................................................ 18 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................................................................................GGCGTGGCTCAGTTTCGTTGAGGTC... 25 0 1 1.00 1 1 0 0 0 0
....................................................................................................................AGTACGACGTTCAGCGGGAAGT................................................................................................................. 22 0 1 1.00 1 0 1 0 0 0
............................................................................TCCGGTTCCTCAAGGTAAGTGGGTT...................................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0
..........................................................................................................................................................................................................................GTGGTGGCGTGGCTCAGTTTCGT.......... 23 0 1 1.00 1 0 1 0 0 0
..............GACAACACAGGTGACGTTCCCTTTGGT.................................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................................GTGGCGTGGCTCAGTTTCGT.......... 20 0 1 1.00 1 1 0 0 0 0
.................................................................................................................GGGAGTACGACGTTCAGCGGGAAG.................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................................GGGGTAGGTAGAGGGGTCGTTGAC............................................ 24 0 1 1.00 1 1 0 0 0 0
...............................................................................GGTTCCTCAAGGTAAGTGGGT....................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
...................................................................ATATAGTCTTCCGGTTCCTCAAGGT............................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
.........................................................................TCTTCCGGTTCCTCAAGGTAAGT........................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
......................................................................................AAAGGTAAGTGGGTTCGGTT................................................................................................................................................. 20 1 1 1.00 1 1 0 0 0 0
.............................GTTCCCTTTGGTGCGACG............................................................................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0
...............................................GAGGATATTTCCGACGTTGCATATAGT................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0
.........................................................................................................TCCGGGTAGGGAGTACGACGT............................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0
..............................................................................CGGTTCCTCAAGGTAAGTGGGT....................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
.............................................................................................................GGTAGGGAGTACGACGTTCAGC........................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0
....................................................................................................................................................ACGGTTTATAGAATAAACGGTCGT............................................................................... 24 0 1 1.00 1 1 0 0 0 0
.................................................................GCATATAGTCTTCCGGTTCCTCAAGGT............................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
............................................................................TCCGATTCCTCAAGGTAAGTGG......................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0
........TGGACGGACAACACAGGTGACGT............................................................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0
................................................................................................AGGTTCGGTTCCGAGTAGGGAG..................................................................................................................................... 22 2 1 1.00 1 1 0 0 0 0
........................................................................................................................................GTGGGTTTCAACACGGTTTATAGAAT......................................................................................... 26 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................TGGGTTTCAACACGGTTTATAGAA.......................................................................................... 24 0 1 1.00 1 1 0 0 0 0
............................................................................................................................GTTCAGCGGGAAGTGGGTTTCA......................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................AGTGGGTTTCAACACGGTTTATA............................................................................................. 23 0 1 1.00 1 1 0 0 0 0
........................................................TCCGACGTTGCATATAGTCTTCCGGT......................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................GGGATGCATCAGGGGTAGGT........................................................... 20 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................TGGATTTCAACACGGTTTATAGAAT......................................................................................... 25 1 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................................GTGGCGTGGCTCAGTTTCGTG......... 21 1 1 1.00 1 1 0 0 0 0
............................................................................................................GGGTAGGGAGTACGACGT............................................................................................................................. 18 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................AGTGGGTTTCAACACGGTTTATAGAAT......................................................................................... 27 0 1 1.00 1 1 0 0 0 0
......................................................................................GTCGGTAAGTGGGTTCGGTTCCGGGT........................................................................................................................................... 26 3 1 1.00 1 0 1 0 0 0
............................................................................TCCTGTTCCTCAAGGGAAGTGGGT....................................................................................................................................................... 24 2 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................................................................TGGCGTGGCTCAGTTTCGTTGAGGT.... 25 0 1 1.00 1 0 1 0 0 0
..TCTTCTTGGACGGACAACACAGGTGAC.............................................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0
..........................................................................CTTCCGGTTCCTCAAGGTAAGTGGGT....................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................GGGTTTCAACACGGTTTA............................................................................................... 18 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................................................GGTAGGTAGAGGGGTCGTT............................................... 19 0 1 1.00 1 0 1 0 0 0
...CTTCTTGGACGGACAACACAGGT................................................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0
....................................................................................................TCGGTTCCGGGTAGGGAGTACGACGT............................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................................................................TTTGACGGGCTGTGTGGGTGGT............................ 22 1 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................................................................GCTCAGTTTCGTTGAGGTCTTG 22 0 1 1.00 1 1 0 0 0 0
............................................................................TTCGGTTCCTCAAGGTAAGTGGGT....................................................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0
.........GGACGGACAACACAGGTGACGTTCCCT....................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
...............................................................................................................TAGGGAGTACGACGCTCAGCGGG..................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0
................................................AGGATATTTCCGACGTTGCATATAGT................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0
...................................................................................CCTCAAGGTAAGTGGGTTCGGTT................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0
....................................................................................................................................................................................TCAGGGGTAGGTAGAGGGGT................................................... 20 0 1 1.00 1 1 0 0 0 0
.............................................................................CCGGTTCCTCAAGGTAAGTGGGTT...................................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0
..............................................................................................................GTAGGGAGTACGACGTTCAGC........................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................GTCGTGCCATGCATCAAGGGT............................................................... 21 3 1 1.00 1 0 0 0 1 0
.......................................................................................................GTTCCGGGTAGGGAGTACGTCGT............................................................................................................................. 23 1 1 1.00 1 1 0 0 0 0
................................................................................................................ATGGAGTACGACGTTCAGCGGGAAGT................................................................................................................. 26 1 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................GGATGCATCAGGGGTAGGT........................................................... 19 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................GGGAAGTGGGTTTCAACACGGTT................................................................................................. 23 0 1 1.00 1 1 0 0 0 0
........TGGACGGACAACACAGGTGACGTTCCC........................................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0
............................................................................................................................GTTCAGCGGGAAGTGGGTT............................................................................................................ 19 0 1 1.00 1 1 0 0 0 0
.....................................................................................................CGGTTCCGGGTAGGGAGTACGACGT............................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0
.................................................................GCATATAGTCTTCCGGTTCCTCAAGG................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0
....................................................................................................................................................................................TCAGGGGTAGGTAGAGGGGTCGT................................................ 23 0 1 1.00 1 1 0 0 0 0
..............................................GGAGGCTATTTCCGACGTTGCATAT.................................................................................................................................................................................... 25 1 1 1.00 1 0 1 0 0 0
..................................................................................................................GGAGTACGACGTTCAGCGGGAAGT................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0
......................AGGTGACGTTCCCTTTGGTGCGACG............................................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0
..................................................................................................................GGAGTACGACGTTCAGCGGGAA................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................................AGGTAGAGGGGTCGTTGAC............................................ 19 0 1 1.00 1 1 0 0 0 0
.....................................................................ATAGTCTTCCGGTTCCTCCAGGTAAGT........................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0
.........................................................................................................................................TGGGTTTCAACACGGTGTATAGAAT......................................................................................... 25 1 1 1.00 1 1 0 0 0 0
...........................................................................................................................................................................TGGGATGCAGAAAGGGTAGGT........................................................... 21 3 2 0.50 1 0 0 0 1 0
.......................................................................................................................................AGTGGGTTTCAACACGGG.................................................................................................. 18 1 2 0.50 1 1 0 0 0 0
.........................................................................................................AATGGGTAGGGAGTACGACGT............................................................................................................................. 21 3 2 0.50 1 1 0 0 0 0
........................................................................................................................................................................TCGTGCGATGCTTCAGGGCT............................................................... 20 3 3 0.33 1 0 0 0 1 0
......................................................................................................................................................................GAACGTGGGATGCATAAGGG................................................................. 20 3 3 0.33 1 0 0 0 0 1
.............................GGGCCCATTGGTGCGACGGA.......................................................................................................................................................................................................... 20 3 4 0.25 1 0 0 0 1 0
........................................................................................................................................................................................ATGTAGGTAGAGGGGTCGT................................................ 19 2 4 0.25 1 0 1 0 0 0
..........................................................................................................AATGGTAGGGAGTACGACGT............................................................................................................................. 20 3 5 0.20 1 1 0 0 0 0
...................................TTTGGTGCGACGGAAGGGAT.................................................................................................................................................................................................... 20 3 6 0.17 1 0 0 0 1 0
....................................................................................................................................GGAAGTGGGTTTCAGAAC..................................................................................................... 18 2 7 0.14 1 0 0 0 1 0
...........ACGGCGAACACAGGTGACG............................................................................................................................................................................................................................. 19 2 8 0.13 1 1 0 0 0 0
........................................................................................................................CGACAGTTAGCGGGAAGTGG............................................................................................................... 20 3 10 0.10 1 0 1 0 0 0
..............................TTCCGATTGGTGCGACGGC.......................................................................................................................................................................................................... 19 3 12 0.08 1 0 0 0 1 0
..............................TGCCCATTGGTGCGACGGT.......................................................................................................................................................................................................... 19 3 14 0.07 1 0 0 0 1 0
....................................................................................................................................................................................................................GTGTGGGTGGTGGGGTGG..................... 18 1 16 0.06 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_30:914999-915249 + dpe_1436 AAAGAA-GAA----CCTGCCTGTTGTGTCCACTGCAAGGGAAACCACGCTGCCTCCTATAAAGGCTGCAACGTATATCAGAAGGCC-----------AAGGAGTTC---------------------------------CATTCACCCA---AGCCAAGG-CCCATC------------------------------CCTCATGCT-GCAAGTCGCCCTTC-ACCC---------------AAAGTTGTGCCAAATATCTTATTTGCCAGCACCCTA-----------------------------------------------------------------------------CGTAGTCCCCATCCATCTCCCCAGCAACTGCC--------------------------------------------------------------CGACACACCCACCACCGC-ACCGAGTCAAAGCAACT-------CCA-----G-------------------AAC
dp5 Unknown_group_14:7786-7865 + AGGCAG-GAG----GATCCCAAATGCGCCAACTGTAGCGGCAAGCACGTGAGCTGCTACAAGGGTTGTCCCGCCTACAAAAAGGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000001100:4272-4529 + AAGGACCGAT----CCTCCCCGCTGTGCTCACTGCAAGGGCAACCATACTGCCTCTTATAAGAGCTGCAAAGTCTATTTGAAGGCA-----------AAGGAGACG---------------------------------CATTTGCCAA---AGCCAAGG-TCAACCCCAACGACACCATCACCAGGTTGGTGGTAAACCTCTGCGAGCAAGCC--------------------------------------AGGCGTCACTTTCGCCAATATATTAAA-----------------------------------------------------------------------------AGGCAATCAGCTGCCTCCCCAGCA---GGC-------------AGAGGCCCCTCCTGTC-A-------ATT-------------CGTCCC-----------------------------AAACAAGCC-------AAA-----G-------------------ATT
droVir3 scaffold_13036:119849-120089 + AGCAGT-GAC----CCGGCCTTCTGCCTGCACTGCCAGGGTCCCCATGTGGCCTCATATAAAGGATGCCCAGCCTATAAGAAGGCA-----------AAGAGCCTT---------------------------------TTAACGGCAAACGGAC--AG-AC-AGCTCCAAGAAC-----------------------------T-------CT---AACTCCAGC---------------AAAGTGAATGCAAACATTAGTTTTGCTAAGACTGCAAAG----------A-------------------------------------------------------------------GCACCTA----------------------------------CGAGGCA----AATCA-A-------GCTTCC-----TGCCCGGATTCAC---------------AGCCGGACAATCAACTTAATG-------CGA-----T-------------------AGT
droMoj3 scaffold_6680:24119371-24119642 - CGTGAA-GCC----CCGCCCTGCTGTGCTCTCTGCAATGAAAACCATGCAGCCTCTTATAAAGGCTGCAAGGTTTATCAGAAGGCC-----------AAAGAGCTC---------------------------------CACTCGCCAC---AACCTAGA-CACATA------------------------------CCCACAACT-TCAAGCCGCCCCTC-ACAG---------------CCTACTGTGCCCGGGATGTCGTACGCCAGTAAAGTC-----------------------------------------------------------------------------CGTGGTCTACAGCAGCCAACACAACAATTT--------------------CCACAACAGCA-A-------GGT-------------ACACCTCACGCCTCACACACACCCCC-TCCCGTCCAAACCAATT-------CCA-----G-------------------ACT
droAna3 scaffold_13230:2820740-2820978 - TTTAGC-GAA----CCACCCCTTTGTCTCCACTGCAATGGGTCTCACACAGTCTCAAACAAAGGTTGTCCAGCCTATAAAAAGGCC-----------AAAGGCGCA---------------------------------TTTGCCGTAA---AGC--CG-AC-AGTGCCACGAGG-----------------------------CCAGCAAGCC---CATTTCAGC---------------AAGGTTAACCCCAACTTTAGCTATGCCAGCGCTGCCAAA----------AGCGGAGT---------TCCTCAGT---TTA----------------------------------------------------------------------------------ACATCAATGCCA-AT-------CC-------------CGATCCT----------------AGTCCTACAAGC----------A-----ATCC------------------------TAT
droBip1 scf7180000395798:34230-34479 + GCCAGT-GAA----CCAGCAGTCTGCCTCCACTGCGACGGATCACACGCGGCCTCTTACAAGGGCTGTCCAGCCTACAAAAAGGCA-----------AAGAGCACG---------------------------------TTCGCCCCCA---AGC--AGA-C-TGCCCCAAGACG-----------------------------CCAGCAACCT---CAATTCAGC---------------AA-ATTAACCCTAACATCAGCTATGCTAGCGCAGTCAAA----------AACGGAGC---------ACCACAG---TTTG----------------------------------------------------------------------------------ATTCCAACCCCA-AT-------CC-------------CGATCCC----------------AGTCTTTCAAGT----------AATCCA-----------------ATGGACGCCCTAAC
droKik1 scf7180000300688:5124-5238 + AAAGAA-GAC----CCAA----------------AAACGAAAAACACACAGCTAACTACAGAGGCTGCGTGGTCTACAAGGAG*GGGCCACTTGCCTT-------------------------------CCCAACGTCCCACTTTCCCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTGGA---------------AAC--------------TCAACGC---------------------------------TC
droFic1 scf7180000453321:10213-10469 + AAGAAT-GTT----CCTGCAAAATGCGCACACTGCGGAGGTGACCATGCAGCGTCGTACAAGGGCTGCCGGGTCTATCAAAAGGCC-----------AAGGAACGG---------------------------------CTCGGACCAA---AGCCCAGA-CAAGTCCCGGAGCCGGCAGCACAGAGGCA--------------GCAGTT---------ATCTGCT---------------AAGGTGAGCGGAAATCTAAGTTATGCCAATGCACTTGG----------TGG---ACAAAACTCAACA-------------TT-------------CGT------CAGACCAGA--------------------------------------------------------AGCCAAATCCAGCCAAG----------AGTTAC--------------------------------CGCAAAACT-------CCA-----T-------------------GCT
droEle1 scf7180000491333:26716-26972 - GCCAGC-GAA----CCAGCGTACTGCCTGCACTGCCAAGGCCCACATCCTGCTTCCTACAAAGGCTGCCCTGCATACAAGAAGGCC-----------AAAAGTCTA---------------------------------CTAGCTCCTA---GGC--AG-CC-AGCCCCTAGGGC-----------------------------CCAACAACCCGCCAAATCTCGT---------------ATGGTAGACCCCTCCATCAGCTTTGCCAACGCGGAAAGA----------AATTGTGT---------------------------------------------------------------------------------------------AGCCCCTGAGAAGCCCCAGCAGCA-A-------GCT-------------CCACCCGA---------------AGC--------------CACCCAA------------GACTCCATGATGGCAGCTATGAT
droRho1 scf7180000774992:7352-7464 - AAAGAC-AAA----GA-----AATGCGCTAACTGTGGAGATAACCATACCGCAAACTACAGAGGCTGCCCGGTCTATAAAGAGCTG-----------AAGAGTCAG---------------------------------TT--------------------------------------------------------------------------------------------------------------TCAACAAGCAAAACAAGCACGCTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CC
droBia1 scf7180000299749:14350-14547 + ATGTAA--AC----CCAGTCAAGTGCGTTAACTGTGGCGGAAACCACACAGCTAGCTATAAAGGCTGCGTTGTTTATCAGCAGATTGCAAATCGACGAAAAAGTGTCATATCCCATCGCAGCACCGTCCCTCAACAGTCAACTAGCCCA-------------------------------------------------AATGTTCGTTCAAACT---TT-------GCGGCACCAAACTCC---------------------TACGCAAATGCCGTC-----------------------------------------------------------------------------CGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------TC
droTak1 scf7180000413609:578-834 - GGTAGC-GAA----CCAGCGTACTGCCTGCACTGCCAAGGCCCACATCCTGCATCCTACAAAGGCTGCCCTGCGTATAAGAAGGCC-----------AAAAGTCTG---------------------------------CAAGCTCCTA---GGC--AG-CC-AGCCCCTAGGGC-----------------------------CCAACAACCCGCCAAATCTCGC---------------ATGGTTGACCCCTCTATCAGCTTTGCCAACGTGGCTAGG----------AATTCTGT---------------------------------------------------------------------------------------------AGCCCCCGAGAAGCCCCAGCAGCA-A-------GCT-------------CCACCTGA---------------AGC--------------CACCCAA------------GACTACATGATGGCAGCTATGAT
droEug1 scf7180000409131:16658-16896 - AAAGAA-CAA----CCGGCAAAATGTGCGAACTGCAACGAAAATCACGCTGCTAGTTACAAAGGGTGTAGGGTCTATAAAGAGCTCAT--ATCAA--AAAAATTAA---------------------------------CT-ACGGCTGGAAAAC--AG-AT-G------------------------------------------------------------------------------------------------------------CACTCCA----------AGG---ACCATACTAAAAA-------------TGTTTCTGAAATATCTCAAACACC---------TATAGTGCCGACCCAACAACCTAAAAACTATCAATCTTACGCCCAAGTTGCTGCAGGAAAT-A-------ATG-------------C------------------------------------------------TACTAG------------------------TAC
dm3 chrUextra:9255057-9255319 + GAGAAC-GAG----AAGGCATGCTGCCTTCACTGCCAAGCGGACCACCCTGCCTCGTTTAGAGGGTGCCCTGCTTATAAAAAGGCA-----------AAGGCACAG---------------------------------CAAGCCCCCA---AACCCAGA-CCGGCC------------------------------ACCCCTATCAGCAAGCC---CT-------GCACCACCAAGCTCCCA-AGTATCTCCAATATGAGCTACAAAGATGCGCTCATGTCTACCCAAG-------T---------GCCTCAGCAAAGCAAT-------------CCC------AACCAAACC--------------------------------------------------------CGTC---------------------AAACCCCACCTGA---------------AGC--------------TCCGCAACCCAGTAA------------------------CAT
droSim2 node_29411:377-639 - GAGAAC-GAG----AAGGCATGCTGCATTCACTGCCAAGCTGACCACCCTGCCTCGTTTAGGGGTTGCGCTGCTTATAAAAAGGCG-----------AAGGCACAG---------------------------------CAAGCCCCCA---AACCCAGA-CCGGCC------------------------------ACCTCCATCAGCAAGCC---CT-------GCACTACCAAGCTCCGA-AGTATCTCCAATATGAGCTACAAAGATGCGCTCATGTCTACCCAAG-------T---------GCCACAGCAAACCAAT-------------CCC------AACCTAACC--------------------------------------------------------CATT---------------------AAACCCCACCTGA---------------AGC--------------CCCGCAACCCAGCAA------------------------CAT
droSec2 scaffold_2469:1089-1346 - GAGGGA-GGACGACAAAGCGTGCTGCTTCCACTGCCAGGCGGACCATCCTGCGTCTTTCAAGGGATGCCCTGCATACAAAAGGGCC-----------AAAGCACTC---------------------------------GCTGCTCCGA---AAACAAGG-CCCGTC------------------------------GCTAATGCTAACAAGGCGCCGCCCGTG--GCATCACCAAAC------GTCACCTCTGGCAGGAGCTACCGAGACGCCCTCAAC----------GG---AGTGCACGCAGCACCGCAG---AATC----------------CC-------------------------------------------------------------------------ACA-AC-------CC--CAGTCCAAACCCAAACAGA---------------AAC--------------CCCACAC---------------------------------TC
droYak3 v2_chrX_random_001:6040-6302 + GAGGAC-GAG----AAGGCATGCTGCCTTCACTGCCAAGCTGACCACCCCGCTTCATACAGAGGATGCCCTGCCTACAAGAAGGCC-----------AAGGCACAG---------------------------------CAAGCCCCCA---AACCCAGA-CCGGCT------------------------------ACATCTACCAGCAAGCC---CA-------GCACCATCCAGATCCCA-AACATCTCCAATATGAGCAATAAAGACGCGCTTAAGTCCACTCAAG-------C---------ACCACAGCAATCCGAT-------------CCC------AACCAAAAC--------------------------------------------------------CGCC---------------------AAACCCCACCTGA---------------AGC--------------TCCGCAATCCAGTAA------------------------CTT
droEre2 scaffold_4858:144642-144899 + GAGGAC-GAG----AAGGAATGCTGCCTTCACTGCCAAGCCGACCACCCTGCTTCGTTCAGAGGATGCCCTGCTTACAAGAAGGCC-----------AAGGCACAG---------------------------------CAAGCCCCCA---AACCCAGA-CCGGCC------------------------------ACATATACCAGCAAGCC---CT-------GCACCGTCCAGATCCCA-AATATCTCCAATATGAGCTACAAAGACGCGCTCAA----------G-------T---------GCCACAGCAAACTAAT-------------CCA------AACCAAACC--------------------------------------------------------CGCC---------------------AAACCCCACCAGA---------------AGC--------------TCCGCAATCCAGTAATCTGG-------------------AAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
AAAGAA-GAA----CCTGCCTGTTGTGTCCACTGCAAGGGAAACCACGCTGCCTCCTATAAAGGCTGCAACGTATATCAGAAGGCC-----------AAGGAGTTC---------------------------------CATTCACCCA---AGCCAAGG-CCCATC------------------------------CCTCATGCT-GCAAGTCGCCCTTC-ACCC---------------AAAGTTGTGCCAAATATCTTATTTGCCAGCACCCTA-----------------------------------------------------------------------------CGTAGTCCCCATCCATCTCCCCAGCAACTGCC--------------------------------------------------------------CGACACACCCACCACCGC-ACCGAGTCAAAGCAACT-------CCA-----G-------------------AACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................................................AGAAGGCC-----------AAGGAGTTC---------------------------------CATTCAC........................................................................................................................................................................................................................................................................................................................................................................................2411.001001000
..................................................................GCAACGTATATCAGAAGGCC-----------AAGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................CAACTGCC--------------------------------------------------------------CGACACACCCAC..............................................................2011.001010000
.....................................................................ACGTATATCAGAAGGCC-----------AAGGAGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
.......................................................................................................................................................................................................TCATGCT-GCAAGTCGCCCTTC-ACCC---------------.........................................................................................................................................................................................................................................................................................2511.001010000
........................................................TATAAAGGCTGCAACGTATATCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
.....................................................................ACGTATATCAGAAGGCC-----------AAGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
..........................................................................................................................................................................................................TGCT-GCAAGTCGCCCTTC-ACCC---------------AAAG.....................................................................................................................................................................................................................................................................................2611.001001000
.............................................................................................................................................TTCACCCA---AGCCAAGG-CCCA.....................................................................................................................................................................................................................................................................................................................................................................2011.001010000
.............................................................................................................................................................................................................T-GCAAGTCGCCCTTC-ACCC---------------AAA......................................................................................................................................................................................................................................................................................2211.001010000
.....................................................................................................................................................................................................................................................................................................................................................................AGTCCCCATCCATCTCCCC..................................................................................................................................................1911.001010000
dp5
AGGCAG-GAG----GATCCCAAATGCGCCAACTGTAGCGGCAAGCACGTGAGCTGCTACAAGGGTTGTCCCGCCTACAAAAAGGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................AAGCACGTGAGCTGCTACAAGGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................23444.25177017200200300
.........................................AAGCACGTGAGCTGCTACAAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................22431.75127012200000500
.........................................AAGCACGTGAGCTGCTACAAGGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2448.253303300000000
.........................................AAGCACGTGAGCTGCTACAAGGGTTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2646.502602500000100
..........................................AGCACGTGAGCTGCTACAAGGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2243.001201200000000
..........................................AGCACGTGAGCTGCTACAAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2142.501001000000000
.......................TGCGCCAACTGTAGCGGCAAGCACG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020200000000
.........................................AAGCACGTGAGCTGCTACAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2142.0080600000200
.........................................AAGCACGTGAGCTGCTACAAGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2342.0080800000000
.........................................AAGCACGTGAGCTGCTACAAGGGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2541.2550500000000
.......GAG----GATCCCAAATGCGCCAACTGTAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.......................TGCGCCAACTGTAGCGGCAAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000010
.........................................AAGCACGTGAGCTGCTACAAGGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2461.0060300300000
.......................TGCGCCAACTGTAGCGGCAAGCACGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000010
................TCCCAAATGCGCCAACTGTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..........................................AGCACGTGAGCTGCTACAAGGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2341.0040400000000
.................CCCAAATGCGCCAACTGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
......................ATGCGCCAACTGTAGCGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100000
..........................................AGCACGTGAGCTGCTACAAGGGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.7530300000000
..........................................AGCACGTGAGCTGCTACAAGGGTTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.7530300000000
................................TGTAGCGGCAAGCACGTGAGCTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2360.6740100000300
...CAG-GAG----GATCCCAAATGCGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010100000000
.........................................AAGCACGTGAGCTGCTACAAGGGTTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2740.5020200000000
.....................................................TGCTACAAGGGTTGTCCCGCCTACAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.2510100000000
...........................................GCACGTGAGCTGCTACAAGGGTTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.2510100000000
........................................CAAGCACGTGAGCTGCTACAAGGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.2510000000010
.........................................AAGCACGTGAGCTGCTACAAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2240.2510100000000
...........................................GCACGTGAGCTGCTACAAGGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2240.2510100000000
..........................................AGCACGTGAGCTGCTACAAGGGTTGTCCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2940.2510100000000
...........................................GCACGTGAGCTGCTACAAGGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.2510100000000
.........................................AAGCACGTGAGCTGCTACAAGGGTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.2510100000000
.........................................AAGCACGTGAGCTGCTACAAGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.2510100000000
..........................................AGCACGTGAGCTGCTACAAGGGTTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.2510100000000
...........................................GCACGTGAGCTGCTACAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.2510100000000
.................................................GAGCTGCTACAAGGGTTGTCCCGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.2510100000000
........................................CAAGCACGTGAGCTGCTACAAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.2510100000000
.........................................AAGCACGTGAGCTGCTACAAGGGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.2510100000000
............................................CACGTGAGCTGCTACAAGGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.2510100000000
................................................TGAGCTGCTACAAGGGTTGTCCCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.2510100000000
.........................................AAGCACGTGAGCTGCTACAAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2240.2510100000000
.............................................ACGTGAGCTGCTACAAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1840.2510100000000
.........................................AAGCACGTGAGCTGCTACAAGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.2510100000000
..................................TAGCGGCAAGCACGTGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1960.1710100000000
..........................................AGCACGTGAGCTGCTACAAGGGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2460.1710100000000
...................................AGCGGCAAGCACGTGAGCTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2060.1710100000000
..................................TAGCGGCAAGCACGTGAGCTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2160.1710100000000
................................TGTAGCGGCAAGCACGTGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2060.1710000000010
.........................................AAGCACGTGAGCTGCTACAAGGAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2560.1710100000000
.........................................AAGCACGTGAGCTGCTACAAGGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2460.1710100000000
droWil2
AAGGACCGAT----CCTCCCCGCTGTGCTCACTGCAAGGGCAACCATACTGCCTCTTATAAGAGCTGCAAAGTCTATTTGAAGGCA-----------AAGGAGACG---------------------------------CATTTGCCAA---AGCCAAGG-TCAACCCCAACGACACCATCACCAGGTTGGTGGTAAACCTCTGCGAGCAAGCC--------------------------------------AGGCGTCACTTTCGCCAATATATTAAA-----------------------------------------------------------------------------AGGCAATCAGCTGCCTCCCCAGCA---GGC-------------AGAGGCCCCTCCTGTC-A-------ATT-------------CGTCCC-----------------------------AAACAAGCC-------AAA-----G-------------------ATTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................................................................................................................................................................................................................................................................................................................................................................................................................CCTCCTGTC-A-------ATT-------------CGTCCC-----------------------------AAACAAGC.......................................27120.25303000
........................................................................................................................................................................................................TCTGCGAGCAAGCC--------------------------------------AGGCGTCACT....................................................................................................................................................................................................................................................................24140.21303000
.....................................................................................................................................................................................................ACCTCTGCGAGCAAGCC--------------------------------------AGGCGT........................................................................................................................................................................................................................................................................23160.19303000
...............................................................................................................................................TGCCAA---AGCCAAGG-TCAACCCCAACGA............................................................................................................................................................................................................................................................................................................................................................27110.18202000
......................................................................................................................................................................................................................................................................................................................................................................................................................CCTCCTGTC-A-------ATT-------------CGTCCC-----------------------------AAACA..........................................24130.15202000
.....................................................................................................................................................................................................ACCTCTGCGAGCAAGCC--------------------------------------AGGCGTCA......................................................................................................................................................................................................................................................................25150.13202000
........................................................................................................................................................................................................TCTGCGAGCAAGCC--------------------------------------AGGCGTCA......................................................................................................................................................................................................................................................................22150.13202000
................................................................................................................................................................................................................................................................................................................................................................................................................................A-------ATT-------------CGTCCC-----------------------------AAACAAGCC-------AAA-----G-------------------A..24110.09101000
.........................................................................................................................................................GCCAAGG-TCAACCCCAACGACACC........................................................................................................................................................................................................................................................................................................................................................24110.09101000
..................................................................................................................................................CAA---AGCCAAGG-TCAACCCCAACGACACC........................................................................................................................................................................................................................................................................................................................................................28110.09101000
...............................................................................................................................................................................................................................................................................................................................................................................TGCCTCCCCAGCA---GGC-------------AGAGGCC....................................................................................................................23110.09101000
................................................................................................................................................................................................................................................................................................................................................................................................................................A-------ATT-------------CGTCCC-----------------------------AAACAAGCC-------AAA-----G-------------------AT.25110.09101000
......................................................................................................................................................................................................................................................................................................................................................................................................................CCTCCTGTC-A-------ATT-------------CGTCCC-----------------------------AAACAAG........................................26120.08101000
......................................................................................................................................................................................................................................................................................................................................................................................................................CCTCCTGTC-A-------ATT-------------CGTCCC-----------------------------AAAC...........................................23130.08101000
........................................................................................................................................................................................................TCTGCGAGCAAGCC--------------------------------------AGGCGTCACTTTCG................................................................................................................................................................................................................................................................28130.08101000
.................CCCCGCTGTGCTCACTGCAAGGGCAACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28130.08101000
..................................................................................................................................................................CAACCCCAACGACACCATCACCAG................................................................................................................................................................................................................................................................................................................................................24130.08100010
.............................CACTGCAAGGGCAACCATACTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23140.07101000
...........................CTCACTGCAAGGGCAACCATACTGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26140.07101000
........................................................................................................................................................................................................TCTGCGAGCAAGCC--------------------------------------AGGCGTCACTT...................................................................................................................................................................................................................................................................25140.07101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................CTCCTGTC-A-------ATT-------------CGTCCC-----------------------------A..............................................19140.07101000
.............................................................................................................................................................................................................GAGCAAGCC--------------------------------------AGGCGTCACT....................................................................................................................................................................................................................................................................19140.07101000
.............................................................................................................................................................................................................................................................................ATATATTAAA-----------------------------------------------------------------------------AGGCAATCAGCTGC........................................................................................................................................................24150.07101000
...........................................................................................................................................................................................................................................................................CAATATATTAAA-----------------------------------------------------------------------------AGGCAATCAGCTGCC.......................................................................................................................................................27150.07101000
.....................GCTGTGCTCACTGCAAGGGCAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22150.07101000
.....................GCTGTGCTCACTGCAAGGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19160.06101000
....................................................................................................................................................................................................AACCTCTGCGAGCAAGCC--------------------------------------AGG...........................................................................................................................................................................................................................................................................21160.06101000
........................................................................................................................................................................................................TCTGCGAGCAAGCC--------------------------------------AGGCGTC.......................................................................................................................................................................................................................................................................21160.06100100
droVir3
AGCAGT-GAC----CCGGCCTTCTGCCTGCACTGCCAGGGTCCCCATGTGGCCTCATATAAAGGATGCCCAGCCTATAAGAAGGCA-----------AAGAGCCTT---------------------------------TTAACGGCAAACGGAC--AG-AC-AGCTCCAAGAAC-----------------------------T-------CT---AACTCCAGC---------------AAAGTGAATGCAAACATTAGTTTTGCTAAGACTGCAAAG----------A-------------------------------------------------------------------GCACCTA----------------------------------CGAGGCA----AATCA-A-------GCTTCC-----TGCCCGGATTCAC---------------AGCCGGACAATCAACTTAATG-------CGA-----T-------------------AGTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................................................................................................................................ACGGAC--AG-AC-AGCTCCAAGAAC-----------------------------T-------......................................................................................................................................................................................................................................................................................................................23117.00171103000000000000000000000020000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................ACATTAGTTTTGCTAAGACTGCAAAG----------A-------------------------------------------------------------------....................................................................................................................................................................27111.0011006000000000000000000000301000000001000000000000000000000000000
.....................................................................................................................................................ACGGAC--AG-AC-AGCTCCAAGAAC-----------------------------..............................................................................................................................................................................................................................................................................................................................2217.007204000000000000000000000000000000000000000000000001000000000000
....................................................................................................................................................AACGGAC--AG-AC-AGCTCCAAGAAC-----------------------------..............................................................................................................................................................................................................................................................................................................................2315.005000000000000000000000001003000000001000000000000000000000000000
.....................................................................................................................................................ACGGAC--AG-AC-AGCTCCAAGAAC-----------------------------T-------CT---.................................................................................................................................................................................................................................................................................................................2514.004301000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................ACGGAC--AG-AC-AGCTCCAAGAAC-----------------------------T-------C.....................................................................................................................................................................................................................................................................................................................2414.004102000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................GCACCTA----------------------------------CGAGGCA----AATCA-A-------GCTTCC-----.......................................................................................2613.003000000000000000000000000010100000010000000000000000000000000000
....................................................................................................................................................AACGGAC--AG-AC-AGCTCCAAGAAC-----------------------------T-------......................................................................................................................................................................................................................................................................................................................2413.003100000000000000000000000101000000000000000000000000000000000000
........................................................................................................................................................GAC--AG-AC-AGCTCCAAGAAC-----------------------------T-------CT---AAC..............................................................................................................................................................................................................................................................................................................2512.002101000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................AACGGAC--AG-AC-AGCTCCAAGAA............................................................................................................................................................................................................................................................................................................................................................2212.002000000000000000000000000001000001000000000000000000000000000000
....................................................................................................................................................AACGGAC--AG-AC-AGCTCCAAGAAC-----------------------------T-------C.....................................................................................................................................................................................................................................................................................................................2512.002001000000000000000000000100000000000000000000000000000000000000
.....................................................................................................................................................ACGGAC--AG-AC-AGCTCCAAGAAC-----------------------------T-------CT---AACC.............................................................................................................................................................................................................................................................................................................2912.002200000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................ACATTAGTTTTGCTAAGACTGCAAAG----------A-------------------------------------------------------------------G...................................................................................................................................................................2812.002000010000000000000000000000000000001000000000000000000000000000
....................................................................CCAGCCTATAAGAAGGCA-----------AAGAGCCTT---------------------------------T..............................................................................................................................................................................................................................................................................................................................................................................................2812.002000000000000000000000000000000000020000000000000000000000000000
.....................................................................................................................................................ACGGAC--AG-AC-AGCTCCAAGAAC-----------------------------T-------CT---AA...............................................................................................................................................................................................................................................................................................................2712.002002000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................ACATTAGTTTTGCTAAGACTGCAAAG----------........................................................................................................................................................................................................................................2612.002002000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................GGCA----AATCA-A-------GCTTCC-----TGCCCGGAT..............................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................AC--AG-AC-AGCTCCAAGAAC-----------------------------T-------CT---A................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000010000000000000000000000000000000000000
.....................................................................................................................................................ACGGAC--AG-AC-AGCTCCAAG..............................................................................................................................................................................................................................................................................................................................................................1911.001100000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................ACGGAC--AG-AC-AGCTCCAAGAAC-----------------------------T-------CT---C................................................................................................................................................................................................................................................................................................................2611.001100000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................ACGGAC--AG-AC-AGCTCCAAGAAC-----------------------------C-------......................................................................................................................................................................................................................................................................................................................2311.001100000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................ACATTAGTTTTGCTAAGACTGCAAA...................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................AACGGAC--AG-AC-AGCTCCAAGA.............................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000001000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................GAGGCA----AATCA-A-------GCTTCC-----TGCCCGGATT.............................................................................2811.001000000000000000000000000000000000000000000000000000000000000001
..............................................................................................................................................................................................................................................................ACATTAGTTTTGCTAAGACTGCA.....................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................TTAGTTTTGCTAAGACTGCA.....................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................ACGGAC--AG-AC-AGCTCCAAGA.............................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................CAGCCTATAAGAAGGCA-----------AAGAGCCTT---------------------------------TTA............................................................................................................................................................................................................................................................................................................................................................................................2911.001000000000000000000000000100000000000000000000000000000000000000
....................................................................................................................................................AACGGAC--AG-AC-AGCTCCAAGAAA-----------------------------..............................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000001000000000000000000000000000000000000000
....................................................................................................................................................AACGGAC--AG-AC-AGCTCCAAGAAA-----------------------------A-------......................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000100000000000000000000000000000000000000
.....................................................................................................................................................ACGGAC--AG-AC-AGCTCCAAGAAC-----------------------------T-------CT---AAC..............................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................ACATTAGTTTTGCTAAGACTGC......................................................................................................................................................................................................................................................2211.001000000000000000000000000000000001000000000000000000000000000000
...........................................................................................................................................TTAACGGCAAACGGAC--AG-AC-AGCT...................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................CGGAC--AG-AC-AGCTCCAAGAAC-----------------------------T-------CT---.................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000001000000000000000
...........................................................................ATAAGAAGGCA-----------AAGAGCCTT---------------------------------T..............................................................................................................................................................................................................................................................................................................................................................................................2111.001000000001000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................ACATTAGTTTTGCTAAGACTG.......................................................................................................................................................................................................................................................2111.001000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................AACGGAC--AG-AC-AGCTCCAAGAAC-----------------------------T-------CT---.................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000100000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................GCACCTA----------------------------------CGAGGCA----AATCA-A-------GCTTA.............................................................................................2511.001000000000000000000000000010000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................ACATTAGTTTTGCTAAGACTGCCGT...................................................................................................................................................................................................................................................2511.001000010000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................ACGGAC--AG-AC-AGCTCCAAGAAC-----------------------------T-------CT---AACT.............................................................................................................................................................................................................................................................................................................2911.001100000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................ACGGAC--AG-AC-AGCTCCAAGAAC-----------------------------T-------G.....................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000001000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................GCACCTA----------------------------------CGAGGCA----AATCA-A-------GCTTAT-----G......................................................................................2711.001000000000000000000000000010000000000000000000000000000000000000
......................................................................................................................................................CGGAC--AG-AC-AGCTCCAAGAAC-----------------------------T-------T.....................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................................................TGAATGCAAACATTAGTTTTGCTAAGAC.........................................................................................................................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000001
.....................................................................................................................................................ACGGAC--AG-AC-AGCTCCAAGAAC-----------------------------T-------CT---A................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................AGTGAATGCAAACATTAGTTTTGCTAAG...........................................................................................................................................................................................................................................................28200.5511000000001000000000000000050200000021000000000000000000000000000
...................................................................................................................................................................................................................................................AGTGAATGCAAACATTAGTTTTG................................................................................................................................................................................................................................................................23200.5010000000001000000000000000020101000040100000000000000000000000000
.......................................................ATATAAAGGATGCCCAGCCTATAAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2630.331000000000000000000000000001000000000000000000000000000000000000
.......................................................ATATAAAGGATGCCCAGCCTATAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2430.331000000000000000000000000100000000000000000000000000000000000000
...................................................................................................................................................................................................................................................AGTGAATGCAAACATTAGTTTTGCTAA............................................................................................................................................................................................................................................................27200.255000000001000000000000000010200000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................GCACCTA----------------------------------CGAGGCA----AATCA-A-------GCT...............................................................................................23200.255000000000000000000000000040100000000000000000000000000000000000
...................................................................................................................................................................................................................................................AGTGAATGCAAACATTAGTTTTGCTA.............................................................................................................................................................................................................................................................26200.255000000001000000000000000000000000020200000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................GCACCTA----------------------------------CGAGGCA----AATCA-A-------G.................................................................................................21200.204000000000000000000000000020000000020000000000000000000000000000
...............................................................................................................................................................................................................................AGC---------------AAAGTGAATGCAAACATTAG.....................................................................................................................................................................................................................................................................23200.153000000000000000000000000011100000000000000000000000000000000000
...............................................................................................................................................................................................................................AGC---------------AAAGTGAATGCAAACATTAGT....................................................................................................................................................................................................................................................................24200.153000000000000000000000000101000000001000000000000000000000000000
...................................................................................................................................................................................................................................................AGTGAATGCAAACATTAGTTTTGCT..............................................................................................................................................................................................................................................................25200.102000000000000000000000000010000000010000000000000000000000000000
.........................................................................................................................................................................................................................AACTCCAGC---------------AAAGTGAATGCAA............................................................................................................................................................................................................................................................................22160.061001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................CTCCAGC---------------AAAGTGAATGCAAAC..........................................................................................................................................................................................................................................................................22170.061000000000000000000000001000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCGGATTCAC---------------AGCCGGA....................................................20200.051001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................AAGTGAATGCAAACATTAGTTTTG................................................................................................................................................................................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAC---------------AGCCGGACAATCAACTTAA........................................23200.051000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAC---------------AGCCGGACAATCAACTTAATG-------C..............................26200.051000000000000000000000000000000000000000000000100000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGACAATCAACTTAAT.......................................17200.051000000000000000000000000000000000000000000000000001000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGGACAATCAACTTAAT.......................................18200.051000000000000000000000000001000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CAC---------------AGCCGGACAATCAACT...........................................19200.051000000000000000000000001000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................CACCTA----------------------------------CGAGGCA----AATCA-A-------GCT...............................................................................................22200.051000000000000000000000000100000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGGACAATCAACTTAATG-------CGA-----T-------------------A..25200.051000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAATCAACTTAATG-------CGA-----T-------------------AG.21200.051000000000000000000000000000000000000100000000000000000000000000
........AC----CCGGCCTTCTGCCTGCACTGCCAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................AGTGAATGCAAACATTAGTTTTGC...............................................................................................................................................................................................................................................................24200.051000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................AC---------------AGCCGGACAATCAACTTAAT.......................................22200.051000000000000000000000000100000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................C---------------AGCCGGACAATCAACTTAATG-------C..............................23200.051000010000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................AGTGAATGCAAACATTAGTTC..................................................................................................................................................................................................................................................................21200.051000000000000000000000000000001000000000000000000000000000000000
droMoj3
CGTGAA-GCC----CCGCCCTGCTGTGCTCTCTGCAATGAAAACCATGCAGCCTCTTATAAAGGCTGCAAGGTTTATCAGAAGGCC-----------AAAGAGCTC---------------------------------CACTCGCCAC---AACCTAGA-CACATA------------------------------CCCACAACT-TCAAGCCGCCCCTC-ACAG---------------CCTACTGTGCCCGGGATGTCGTACGCCAGTAAAGTC-----------------------------------------------------------------------------CGTGGTCTACAGCAGCCAACACAACAATTT--------------------CCACAACAGCA-A-------GGT-------------ACACCTCACGCCTCACACACACCCCC-TCCCGTCCAAACCAATT-------CCA-----G-------------------ACTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................................................................................................................................................................ACAACT-TCAAGCCGCCCCTC-ACA.........................................................................................................................................................................................................................................................................................................2324.008700010
.........................................................................................................................................................................................................................................................................GCCAGTAAAGTC-----------------------------------------------------------------------------CGTGGTCTACAGC...........................................................................................................................................................2542.7511800030
.................................GCAATGAAAACCATGCAGCCTCTTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2532.678600020
........................................................................................................................................................................................................ACAACT-TCAAGCCGCCCCTC-ACAG---------------.........................................................................................................................................................................................................................................................................................2422.505500000
........................................................................................................................................................................................................ACAACT-TCAAGCCGCCCCTC-ACAG---------------C........................................................................................................................................................................................................................................................................................2522.505400010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACGCCTCACACACACCCCC-TCCCG..................................................2612.002200000
............................................................................................................................................................................................................................................................................................................................................................................................................................GCA-A-------GGT-------------ACACCTCACGCCTCA...................................................................2222.004400000
.........................................................................................................................................................................................................................................................................GCCAGTAAAGTC-----------------------------------------------------------------------------CGTGGTCTACAG............................................................................................................................................................2441.757700000
........................................................................................................................................................................................................ACAACT-TCAAGCCGCCCCTC-AC..........................................................................................................................................................................................................................................................................................................2221.503300000
.........................................................................................................................................................................................................................................................................................................................................................................................ACAATTT--------------------CCACAACAGCA-A-------GGT-------------ACACC.............................................................................2731.334300010
........................................................................TTTATCAGAAGGCC-----------AAAGAGCTC---------------------------------CA.............................................................................................................................................................................................................................................................................................................................................................................................2521.002200000
............................................................................................................................................................................................................................................................................................................................................................................................................................GCA-A-------GGT-------------ACACCTCACGCCTCACA.................................................................2421.002200000
.................................GCAATGAAAACCATGCAGCCTCTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2431.003300000
.........................................................................................................................................................................................................................................................................GCCAGTAAAGTC-----------------------------------------------------------------------------CGTGGTCTACAGCA..........................................................................................................................................................2641.004400000
........................................................................................................TC---------------------------------CACTCGCCAC---AACCTAGA-CACATA------------------------------CCC..................................................................................................................................................................................................................................................................................................................................2931.003200010
........................................................................................................................................................................................................ACAACT-TCAAGCCGCCCCTC-A...........................................................................................................................................................................................................................................................................................................2121.002200000
.................................................................TGCAAGGTTTATCAGAAGGCC-----------AAAGAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................2820.501100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GT-------------ACACCTCACGCCTCAC..................................................................1820.501100000
............................................................................................................................................................................................................................................................................................................................................................................................................................GCA-A-------GGT-------------ACACCTCACGCCTCACACAC..............................................................2720.501100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CAGCA-A-------GGT-------------ACACCTCACGCCTC....................................................................2320.501100000
............................................................................................................................................................................................................................................................................................................................................................................................................................GCA-A-------GGT-------------ACACCTCACGCCTCAC..................................................................2320.501100000
..............................................................................................................................................................................................................................................................................................................................................................................................TT--------------------CCACAACAGCA-A-------GGT-------------ACACCTCACGC.......................................................................2820.501000010
.................................................................TGCAAGGTTTATCAGAAGGCC-----------AAAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................2620.501100000
........................................................................TTTATCAGAAGGCC-----------AAAGAGCTC---------------------------------C..............................................................................................................................................................................................................................................................................................................................................................................................2420.501100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................GGT-------------ACACCTCACGCCTCAC..................................................................1920.501100000
...............................................................................................................................................................................................................................................................................................................................................................................................T--------------------CCACAACAGCA-A-------GGT-------------ACACCTCACGCC......................................................................2820.501100000
...........................................................................................................................................................................................................ACT-TCAAGCCGCCCCTC-ACAG---------------CCTA.....................................................................................................................................................................................................................................................................................2520.501100000
............................................................................................................................................................................................................CT-TCAAGCCGCCCCTC-ACAG---------------CCTA.....................................................................................................................................................................................................................................................................................2420.501100000
.........................................................................................................................................................................................................................................................................GCCAGTAAAGTC-----------------------------------------------------------------------------CGTGGTCTACA.............................................................................................................................................................2340.502200000
........................................................................................................................................................................................................ACAACT-TCAAGCCGCCCCTC-ACAG---------------CCT......................................................................................................................................................................................................................................................................................2720.501100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CAGCA-A-------GGT-------------ACACCTCACGCCTCA...................................................................2420.501100000
............................................................................................................................................................................................................................................................................................................................................................................................................................GCA-A-------GGT-------------ACACCTCACGCC......................................................................1920.501100000
...........................................................................................................................................................................................................................TC-ACAG---------------CCTACTGTGCCCGGGATGTCGTC..................................................................................................................................................................................................................................................................2930.331000001
.................................................................................AGGCC-----------AAAGAGCTC---------------------------------CACTCGCC.......................................................................................................................................................................................................................................................................................................................................................................................2230.331100000
..................................CAATGAAAACCATGCAGCCTCTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2330.331100000
.................................................................................................................................................................................................................................................................TGTCGTACGCCAGTAAAGTC-----------------------------------------------------------------------------CGTGG...................................................................................................................................................................2530.331100000
.........................................................................................................................................................................................................................................................................................................................................................................................ACAATTT--------------------CCACAACAGCA-A-------GGT-------------..................................................................................2230.331100000
.................................GCAATGAAAACCATGCAGCCTCTTAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2630.331100000
...............................................................................................................................................................................................................................................................................AAAGTC-----------------------------------------------------------------------------CGTGGTCTACAGCAGCCA......................................................................................................................................................2430.331100000
..................................CAATGAAAACCATGCAGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.331100000
..........................................................................................................................................................................................................................................................................CCAGTAAAGTC-----------------------------------------------------------------------------CGTGGTCTACAGCAGC........................................................................................................................................................2730.331100000
.......................................................................................................CTC---------------------------------CACTCGCCAC---AACCTAGA-CA.......................................................................................................................................................................................................................................................................................................................................................................2330.331100000
.........................................................................................................................................................................................................................................................................................................................................................................................ACAATTT--------------------CCACAACAGCA-A-------GGT-------------A.................................................................................2330.331100000
.................................GCAATGAAAACCATGCAGCCTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2330.331100000
....................................................................................................................................................................................................................................................................CGTACGCCAGTAAAGTC-----------------------------------------------------------------------------CGTGGTC.................................................................................................................................................................2430.331100000
.........................................................................................................................................................................................................................................................................GCCAGTAAAGTC-----------------------------------------------------------------------------CGTGGTCTACAGCAGC........................................................................................................................................................2830.331100000
.........................................................................................................................................................................................................................................................................................................................................................................................ACAATTT--------------------CCACAACAGCA-A-------GGT-------------ACAC..............................................................................2630.331100000
.........................................................................................................................................................................................................................................................................................................................................................................................ACAATTT--------------------CCACAACAGCA-A-------GGT-------------AC................................................................................2430.331100000
.........................................................................................................................................................................................................................................................................GCCAGTAAAGTC-----------------------------------------------------------------------------CGTGGTCTACAGCAG.........................................................................................................................................................2730.331100000
................................................................................................................................................................................................................................................................................AAGTC-----------------------------------------------------------------------------CGTGGTCTACAGCAGCCA......................................................................................................................................................2330.331100000
.........................................................................................................................................................................................................................................................................GCCAGTAAAGTC-----------------------------------------------------------------------------CGTGGTCTA...............................................................................................................................................................2140.251000010
.........................................................................................................................................................................................................................................................................GCCAGTAAAGTC-----------------------------------------------------------------------------CGTGGTCTAC..............................................................................................................................................................2240.251100000
.............................................................................................................................................................................................................................................................................GTAAAGTC-----------------------------------------------------------------------------CGTGGTCTACAGC...........................................................................................................................................................2140.251100000
droAna3
TTTAGC-GAA----CCACCCCTTTGTCTCCACTGCAATGGGTCTCACACAGTCTCAAACAAAGGTTGTCCAGCCTATAAAAAGGCC-----------AAAGGCGCA---------------------------------TTTGCCGTAA---AGC--CG-AC-AGTGCCACGAGG-----------------------------CCAGCAAGCC---CATTTCAGC---------------AAGGTTAACCCCAACTTTAGCTATGCCAGCGCTGCCAAA----------AGCGGAGT---------TCCTCAGT---TTA----------------------------------------------------------------------------------ACATCAATGCCA-AT-------CC-------------CGATCCT----------------AGTCCTACAAGC----------A-----ATCC------------------------TATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................................................................................................................................................................................................................................................................................................................................................................................................T-------CC-------------CGATCCT----------------AGTCCTACAAGC----------A-----ATCC------------------------...2711.001010000
droBip1
GCCAGT-GAA----CCAGCAGTCTGCCTCCACTGCGACGGATCACACGCGGCCTCTTACAAGGGCTGTCCAGCCTACAAAAAGGCA-----------AAGAGCACG---------------------------------TTCGCCCCCA---AGC--AGA-C-TGCCCCAAGACG-----------------------------CCAGCAACCT---CAATTCAGC---------------AA-ATTAACCCTAACATCAGCTATGCTAGCGCAGTCAAA----------AACGGAGC---------ACCACAG---TTTG----------------------------------------------------------------------------------ATTCCAACCCCA-AT-------CC-------------CGATCCC----------------AGTCTTTCAAGT----------AATCCA-----------------ATGGACGCCCTAACSizeHit CountTotal NormTotal
No Reads
droKik1
AAAGAA-GAC----CCAA----------------AAACGAAAAACACACAGCTAACTACAGAGGCTGCGTGGTCTACAAGGAG*GGGCCACTTGCCTT-------------------------------CCCAACGTCCCACTTTCCCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTGGA---------------AAC--------------TCAACGC---------------------------------TCSizeHit CountTotal NormTotal
No Reads
droFic1
AAGAAT-GTT----CCTGCAAAATGCGCACACTGCGGAGGTGACCATGCAGCGTCGTACAAGGGCTGCCGGGTCTATCAAAAGGCC-----------AAGGAACGG---------------------------------CTCGGACCAA---AGCCCAGA-CAAGTCCCGGAGCCGGCAGCACAGAGGCA--------------GCAGTT---------ATCTGCT---------------AAGGTGAGCGGAAATCTAAGTTATGCCAATGCACTTGG----------TGG---ACAAAACTCAACA-------------TT-------------CGT------CAGACCAGA--------------------------------------------------------AGCCAAATCCAGCCAAG----------AGTTAC--------------------------------CGCAAAACT-------CCA-----T-------------------GCTSizeHit CountTotal NormTotal
No Reads
droEle1
GCCAGC-GAA----CCAGCGTACTGCCTGCACTGCCAAGGCCCACATCCTGCTTCCTACAAAGGCTGCCCTGCATACAAGAAGGCC-----------AAAAGTCTA---------------------------------CTAGCTCCTA---GGC--AG-CC-AGCCCCTAGGGC-----------------------------CCAACAACCCGCCAAATCTCGT---------------ATGGTAGACCCCTCCATCAGCTTTGCCAACGCGGAAAGA----------AATTGTGT---------------------------------------------------------------------------------------------AGCCCCTGAGAAGCCCCAGCAGCA-A-------GCT-------------CCACCCGA---------------AGC--------------CACCCAA------------GACTCCATGATGGCAGCTATGATSizeHit CountTotal NormTotal
No Reads
droRho1
AAAGAC-AAA----GA-----AATGCGCTAACTGTGGAGATAACCATACCGCAAACTACAGAGGCTGCCCGGTCTATAAAGAGCTG-----------AAGAGTCAG---------------------------------TT--------------------------------------------------------------------------------------------------------------TCAACAAGCAAAACAAGCACGCTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCSizeHit CountTotal NormTotal
No Reads
droBia1
ATGTAA--AC----CCAGTCAAGTGCGTTAACTGTGGCGGAAACCACACAGCTAGCTATAAAGGCTGCGTTGTTTATCAGCAGATTGCAAATCGACGAAAAAGTGTCATATCCCATCGCAGCACCGTCCCTCAACAGTCAACTAGCCCA-------------------------------------------------AATGTTCGTTCAAACT---TT-------GCGGCACCAAACTCC---------------------TACGCAAATGCCGTC-----------------------------------------------------------------------------CGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------TCSizeHit CountTotal NormTotal
No Reads
droTak1
GGTAGC-GAA----CCAGCGTACTGCCTGCACTGCCAAGGCCCACATCCTGCATCCTACAAAGGCTGCCCTGCGTATAAGAAGGCC-----------AAAAGTCTG---------------------------------CAAGCTCCTA---GGC--AG-CC-AGCCCCTAGGGC-----------------------------CCAACAACCCGCCAAATCTCGC---------------ATGGTTGACCCCTCTATCAGCTTTGCCAACGTGGCTAGG----------AATTCTGT---------------------------------------------------------------------------------------------AGCCCCCGAGAAGCCCCAGCAGCA-A-------GCT-------------CCACCTGA---------------AGC--------------CACCCAA------------GACTACATGATGGCAGCTATGATSizeHit CountTotal NormTotal
No Reads
droEug1
AAAGAA-CAA----CCGGCAAAATGTGCGAACTGCAACGAAAATCACGCTGCTAGTTACAAAGGGTGTAGGGTCTATAAAGAGCTCAT--ATCAA--AAAAATTAA---------------------------------CT-ACGGCTGGAAAAC--AG-AT-G------------------------------------------------------------------------------------------------------------CACTCCA----------AGG---ACCATACTAAAAA-------------TGTTTCTGAAATATCTCAAACACC---------TATAGTGCCGACCCAACAACCTAAAAACTATCAATCTTACGCCCAAGTTGCTGCAGGAAAT-A-------ATG-------------C------------------------------------------------TACTAG------------------------TACSizeHit CountTotal NormTotal
No Reads
dm3
GAGAAC-GAG----AAGGCATGCTGCCTTCACTGCCAAGCGGACCACCCTGCCTCGTTTAGAGGGTGCCCTGCTTATAAAAAGGCA-----------AAGGCACAG---------------------------------CAAGCCCCCA---AACCCAGA-CCGGCC------------------------------ACCCCTATCAGCAAGCC---CT-------GCACCACCAAGCTCCCA-AGTATCTCCAATATGAGCTACAAAGATGCGCTCATGTCTACCCAAG-------T---------GCCTCAGCAAAGCAAT-------------CCC------AACCAAACC--------------------------------------------------------CGTC---------------------AAACCCCACCTGA---------------AGC--------------TCCGCAACCCAGTAA------------------------CATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................................................................................................................................................................................................................................TCCCA-AGTATCTCCAATATGAGCTAC.................................................................................................................................................................................................................................................................262022.50450000000000000000000000200000000000010304001005000099040000000000000000000000000000000000000000000000000000000000000000000000000000000000000002315151103011716250050000000000000000000000000000000054010013200001900000103130216240002001000510050000000001004000000000000000000000000000000000000010000000011000002142725000000010000000000000000521916000000
..........................................................................................................................................................................................................................................................TCCAATATGAGCTACAAAGATGCGCT......................................................................................................................................................................................................................................................261517.07256000000000000000000000101000000000000000001000000200020000000000000000000000000000000000000000000000000000000000000000000000000000000000000001220065451202050000000000000000000000000000000000240142601020100037514032517000130373010101100000000000000000000000000000000000000000000000000000000000021000034010000004120000000000000021219000000
............................................................................................................................................................................................................................................................................GATGCGCTCATGTCTACCCAAG-------T---------GC.....................................................................................................................................................................................................................25206.6513300000000000000000000010000000000000000000020001001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007002000818644000000000000000000100000000000000111505100200000000000001100014001001001000000000000000000000000000000000000000000000000000000000000030000001500000000092000000000000000401000000
..................................................................................................................................................................................................................................................A-AGTATCTCCAATATGAGCTA..................................................................................................................................................................................................................................................................21205.6011200000000000000000000000000000000000000000000000000002300000000000000000000000000000000000000000000000000000000000000000000000000000000000000032000232201200000000000000000000000000000000000400000011020000000000000000030000000000000000000000000000000000000000000000000000020000521000000000000001018000000001000000000000000051160000000
...............................................CCTGCCTCGTTTAGAGGGTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................21204.8597000000000000000000000000000000000000032002002000303001000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000015605130300700000000000000000000000000000000000000000100000000001000000800000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.................................................TGCCTCGTTTAGAGGGTGCCCTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................24204.20840000000000000000000000120000000000001001001000203010000000000000000000000000000000000000000000201000000000000000000000000000000000000000000003766010430102200000000000000000000000000000000000000200000000000000040000501900102000000000000000000000000000000000000000000000000000000000000002000002501000000000000000000000000000000000
......................................................................................................................................................................................................................................................................TACAAAGATGCGCTCATGTCT...............................................................................................................................................................................................................................................21163.7560000000000000000000000100000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001300000000000120145000000000000000000000000000000000000000000000000000000000000024000140000000000000001320000000000000000000000001031000000
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droSim2
GAGAAC-GAG----AAGGCATGCTGCATTCACTGCCAAGCTGACCACCCTGCCTCGTTTAGGGGTTGCGCTGCTTATAAAAAGGCG-----------AAGGCACAG---------------------------------CAAGCCCCCA---AACCCAGA-CCGGCC------------------------------ACCTCCATCAGCAAGCC---CT-------GCACTACCAAGCTCCGA-AGTATCTCCAATATGAGCTACAAAGATGCGCTCATGTCTACCCAAG-------T---------GCCACAGCAAACCAAT-------------CCC------AACCTAACC--------------------------------------------------------CATT---------------------AAACCCCACCTGA---------------AGC--------------CCCGCAACCCAGCAA------------------------CATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................................................................................AGCAAACCAAT-------------CCC------AACCTAACC--------------------------------------------------------C...............................................................................................................2464.3326000000000000125000
..........................................................................................................................................................................................................................................................................................TACCCAAG-------T---------GCCACAGCAAACCAAT-------------CC........................................................................................................................................................................................2752.6013000201100000000000
........................................................................................................................................................................................................................................................................................................................AGCAAACCAAT-------------CCC------AACCTAACC--------------------------------------------------------CAT.............................................................................................................2662.5015000000000000114000
.......................TGCATTCACTGCCAAGCTGACCACCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200000000000020000
............................................................................................................................................................................................................................................................................................................................................................................................................................TT---------------------AAACCCCACCTGA---------------AGC--------------CCCGCAAC..................................2612.00200000002000000000
.......................TGCATTCACTGCCAAGCTGACCAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200000000000020000
........................................................................................................................................................................................................................................................................................................................AGCAAACCAAT-------------CCC------AACC.............................................................................................................................................................................1871.5711000011000000000000
........................................TGACCACCCTGCCTCGTTTAGGGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2521.50300000000003000000
........................................................................................................................................................................................................................................................................CAAAGATGCGCTCATGTCTACCCAAG-------.................................................................................................................................................................................................................................2671.431000000007000030000
........................................................................................................................................................................................................................................................................CAAAGATGCGCTCATGTCTACCCAA.........................................................................................................................................................................................................................................2571.431000000001000063000
......................................................................................................................................................................................................................................................................................TGTCTACCCAAG-------T---------GCCACAGCAAACCAA........................................................................................................................................................................................................2871.00700000014100010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................T---------------------AAACCCCACCTGA---------------AGC--------------CCCGCAACCC................................2711.00100000001000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................T---------------------AAACCCCACCTGA---------------AGC--------------CCCGCAACC.................................2611.00100000001000000000
.................................................................TGCGCTGCTTATAAAAAGGCG-----------AAGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................2641.00400000001111000000
....................TGCTGCATTCACTGCCAAGCTGACCACCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000001000000000
....................TGCTGCATTCACTGCCAAGCTGACCAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000000010000
...................................CAAGCTGACCACCCTGCCTCGTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.50200000000000020000
..........................................................................................................................................................................................................................T-------GCACTACCAAGCTCCGA-AGTATCTCC.............................................................................................................................................................................................................................................................................2740.50200000000000020000
.................................................TGCCTCGTTTAGGGGTTGCGCTGCTTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.50100000000001000000
........................................................................................................................................................................................................................................................................................................................AGCAAACCAAT-------------CCC------AACCTAACC--------------------------------------------------------................................................................................................................2360.50300000000000012000
..............................................................................................................................................................................................................................................TCCGA-AGTATCTCCAATATGAGCTAC.................................................................................................................................................................................................................................................................2640.50200010000001000000
..........................................................TAGGGGTTGCGCTGCTTATAAAAAGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.50100000000000010000
........................................................................................................................................................................................................TCCATCAGCAAGCC---CT-------GCACTACCAAGC............................................................................................................................................................................................................................................................................................2840.50200000000000020000
..........................................ACCACCCTGCCTCGTTTAGGGGTTGCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2820.50100000000001000000
..........................................................................................................................................................................................................................T-------GCACTACCAAGCTCCGA-AGTATCTC..............................................................................................................................................................................................................................................................................2640.50200000000000020000
....................................................CTCGTTTAGGGGTTGCGCTGCTTATAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2820.50100000000000010000
.................................................TGCCTCGTTTAGGGGTTGCGCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.50100000000001000000
.........................................................................................................................................................................................................................................................................................................................GCAAACCAAT-------------CCC------AACCTAACC--------------------------------------------------------CATT---------------------AA.....................................................................................2820.50100000000000010000
........................................................................................................................................................................................................................................................................................................................AGCAAACCAAT-------------CCC------AACCTAAC.........................................................................................................................................................................2260.50300000000000003000
................................................................TTGCGCTGCTTATAAAAAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.50100000000010000000
...........................................................AGGGGTTGCGCTGCTTATAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.50100000000001000000
.....................................................TCGTTTAGGGGTTGCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1620.50100000000010000000
................................TGCCAAGCTGACCACCCTGCCTCGTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.50200000000000020000
.....................................................TCGTTTAGGGGTTGCGCTGCTTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.50100000010000000000
........................................................................................................................................................................................................................................................................CAAAGATGCGCTCATGTCTACCCAAT-------.................................................................................................................................................................................................................................2670.43300000001000020000
........................................................................................................................................................................................................................................................................CAAAGATGCGCTCATGTCTACCCA..........................................................................................................................................................................................................................................2470.43300000002000001000
.........................................................................................................................................................................................................................................................................................................T---------GCCACAGCAAACCAAT-------------CCC------AACCT............................................................................................................................................................................2550.40200000001000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACCCCACCTGA---------------AGC--------------CCCGC.....................................2130.33100000000000010000
...........................TTCACTGCCAAGCTGACCACCCTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2560.33200000020000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCACCTGA---------------AGC--------------CCCGCAACCCAGCAA------------------------C..2930.33100000000000010000
...............................................................................AAAGGCG-----------AAGGCACAG---------------------------------CAAGCCCCCA---..................................................................................................................................................................................................................................................................................................................................................................................2630.33100000000000010000
........................................................................................................................................................................................................................................................................................................................AGCAAACCAAT-------------CCC------AACCTAACC--------------------------------------------------------CA..............................................................................................................2560.33200000000000002000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACCCCACCTGA---------------AGC--------------CCCGCAACCCAG..............................2830.33100000000000010000
.............................CACTGCCAAGCTGACCACCCTGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2460.33200000010010000000
........................................................................................................................................................................................................................................................................CAAAGATGCGCTCATGTCTACCCATA-------.................................................................................................................................................................................................................................2670.29200000000000020000
........................................................................................................................................................................................................................................................................CAAAGATGCGCTCATGTCTACCCAT.........................................................................................................................................................................................................................................2570.29200000000000020000
........................................................................................................................................................................................................................................................................CAAAGATGCGCTCATGTCTACCCAAG-------T---------.......................................................................................................................................................................................................................2770.29200000001000010000
........................................................................................................................................................................................................................................................................CAAAGATGCGCTCATGTCTACCCAAG-------T---------GC.....................................................................................................................................................................................................................2970.29200000002000000000
....................................................................................................................................................................................................................................................................................CATGTCTACCCAAG-------T---------GCCACAGCAAACCAA........................................................................................................................................................................................................3070.29200000002000000000
....................................................................................................................................................................................................................................................................................CATGTCTACCCAAG-------T---------GCCACAGCAAAC...........................................................................................................................................................................................................2770.29200000002000000000
............................................................................................................................................................................................................TCAGCAAGCC---CT-------GCACTACCAAGCTC..........................................................................................................................................................................................................................................................................................2670.29200000000000020000
......................................................................................................................................................................................................................................TACCAAGCTCCGA-AGTATCT...............................................................................................................................................................................................................................................................................2040.25100000000001000000
.................................................................TGCGCTGCTTATAAAAAGGCG-----------AAG......................................................................................................................................................................................................................................................................................................................................................................................................................................2440.25100000000001000000
.................................................................................................................................................................................................................................................GA-AGTATCTCCAATATGAGCT...................................................................................................................................................................................................................................................................2140.25100000000010000000
......................................................................................................ACAG---------------------------------CAAGCCCCCA---AACCCAGA-CCGGCC------------------------------.....................................................................................................................................................................................................................................................................................................................................2840.25100000001000000000
........................................................................................................................................................................................................TCCATCAGCAAGCC---CT-------GCACTACC................................................................................................................................................................................................................................................................................................2440.25100000001000000000
.....................................................................................................................................................................................................................C---CT-------GCACTACCAAGCTCCGA-AGTATCTC..............................................................................................................................................................................................................................................................................2840.25100000000000010000
..........................................................................................................................................................................................................................T-------GCACTACCAAGCTCCGA-AGTATCTCCAA...........................................................................................................................................................................................................................................................................2940.25100000000000010000
.............................................................................................................................................AGCCCCCA---AACCCAGA-CCGGCC------------------------------A....................................................................................................................................................................................................................................................................................................................................2340.25100000000000010000
..........................................................................................................................................................................................................................T-------GCACTACCAAGCTCCGA-AGTA..................................................................................................................................................................................................................................................................................2240.25100000000001000000
..............................................................................................................................................................................................................AGCAAGCC---CT-------GCACTACCAAGCTCCGA-......................................................................................................................................................................................................................................................................................2740.25100000000000010000
..................................................................................................................................................................................................................................GCACTACCAAGCTCCGA-AGTATCTC..............................................................................................................................................................................................................................................................................2540.25100010000000000000
........................................................................................................................................................................................................TCCATCAGCAAGCC---CT-------GCACTACCAA..............................................................................................................................................................................................................................................................................................2640.25100000000000010000
......................................................................................................................................................................................................................................TACCAAGCTCCGA-AGTATCTCCAATA.........................................................................................................................................................................................................................................................................2640.25100000010000000000
..........................................................................................................................................................................................................................T-------GCACTACCAAGCTCCGA-AGTATCTCCA............................................................................................................................................................................................................................................................................2840.25100000000000010000
.........................................................................................................................................................................................................CCATCAGCAAGCC---CT-------GCACTACCAAGC............................................................................................................................................................................................................................................................................................2740.25100010000000000000
..........................................................................................................................................................................................................................T-------GCACTACCAAGCTCCGA-AGTAT.................................................................................................................................................................................................................................................................................2340.25100000000000010000
..........................................................................................................................................................................................................................T-------GCACTACCAAGCTCCGA-AGTATC................................................................................................................................................................................................................................................................................2440.25100000000000010000
.....................................AGCTGACCACCCTGCCTCGTTTAGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.25100000010000000000
......................................................................................................................................................................................................................................................................TACAAAGATGCGCTCATGTCTACCCAAG-------.................................................................................................................................................................................................................................2850.20100000001000000000
..........................................................................................................................................................................................................................................................................................TACCCAAG-------T---------GCCACAGCAAACCAAT-------------CCC------AA...............................................................................................................................................................................3050.20100000001000000000
........................................................................................................................................................................................................................................................................................TCTACCCAAG-------T---------GCCACAGCAAACCAAT-------------C.........................................................................................................................................................................................2850.20100000001000000000
..........................................................................TATAAAAAGGCG-----------AAGGCACAG---------------------------------CAAGCCCC.......................................................................................................................................................................................................................................................................................................................................................................................2950.20100000000000010000
......................................................................................................................................................................................................................................................................TACAAAGATGCGCTCATGTCTACCCA..........................................................................................................................................................................................................................................2650.20100000001000000000
.........................................................................................................................................................................................................................................................................................................T---------GCCACAGCAAACCAAT-------------CCC------AACCTA...........................................................................................................................................................................2650.20100000001000000000
............................................................................TAAAAAGGCG-----------AAGGCACAG---------------------------------CAAGCCC........................................................................................................................................................................................................................................................................................................................................................................................2650.20100000000001000000
..........................................................................TATAAAAAGGCG-----------AAGGCACAG---------------------------------CAA............................................................................................................................................................................................................................................................................................................................................................................................2450.20100000010000000000
.............................CACTGCCAAGCTGACCACCCTGCCTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2650.20100000000100000000
............................................................................TAAAAAGGCG-----------AAGGCACAG---------------------------------CAAGCCCC.......................................................................................................................................................................................................................................................................................................................................................................................2750.20100000000001000000
..........................................................................................................................................................................................................................................................TCCAATATGAGCTACAAAGATGCGC.......................................................................................................................................................................................................................................................25100.20200010000001000000
...........................TTCACTGCCAAGCTGACCACCCTGCCTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2850.20100000000000010000
..........................................................................................................................................................................................................................................................................................TACCCAAG-------T---------GCCACAGCAAACCAAT-------------C.........................................................................................................................................................................................2650.20100000000000010000
.................................................................TGCGCTGCTTATAAAAAGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2050.20100000000001000000
...................................CAAGCTGACCACCCTGCCTCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.20100000000001000000
..........................................................................TATAAAAAGGCG-----------AAGGCACAG---------------------------------CAAGC..........................................................................................................................................................................................................................................................................................................................................................................................2650.20100000000001000000
......................................................................................................................................................................................................................................................................................................................ACAGCAAACCAAT-------------CCC------AACCTAA..........................................................................................................................................................................2360.17100000000000010000
.....................................................................................................................................................................................................................................................................................................................CACAGCAAACCAAT-------------CCC------AACCTAACC--------------------------------------------------------C...............................................................................................................2760.17100000000000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGA---------------AGC--------------CCCGCAACCCAGCAA------------------------...2460.17100000000000001000
................................................................................................................................................................................................................................................................................................AG-------T---------GCCACAGCAAACCAAT-------------CCC------AACAA............................................................................................................................................................................2760.17100000000000010000
......................................................................................................................................................................................................................................................................................................................ACAGCAAACCAAT-------------CCC------AACCTA...........................................................................................................................................................................2260.17100000000000001000
......................................................................................................................................................................................................................................................................................................................ACAGCAAACCAAT-------------CCC------AACCTAACC--------------------------------------------------------C...............................................................................................................2660.17100000000000010000
............................TCACTGCCAAGCTGACCACCCTGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2560.17100000000000010000
........................................................................................................................................................................................................................................................................................................................AGCAAACCAAT-------------CCC------AACCTAA..........................................................................................................................................................................2160.17100000000000001000
.........................................................................................................................................................................................................................................................................................................................GCAAACCAAT-------------CCC------AACCTAACC--------------------------------------------------------CA..............................................................................................................2460.17100000000000001000
.......................................................................................................................................................................................................................................................................................................................CAGCAAACCAAT-------------CCC------AACCTAACC--------------------------------------------------------C...............................................................................................................2560.17100000001000000000
................................................................................................................................................................................................................................................................................................AG-------T---------GCCACAGCAAACCAAT-------------CCC------AACC.............................................................................................................................................................................2660.17100000010000000000
........................................................................................................................................................................................................................................................................CAAAGATGCGCTCATGTCTACCCATT-------.................................................................................................................................................................................................................................2670.14100000000000010000
...................................................................................................................................................................................................................................................................................TCATGTCTACCCAAG-------T---------GCCACAGCAAAC...........................................................................................................................................................................................................2870.14100000010000000000
.............................................................................................................................................................................................................CAGCAAGCC---CT-------GCACTACCAAGCTC..........................................................................................................................................................................................................................................................................................2570.14100010000000000000
............................................................................................................................................................................................................................................................................GATGCGCTCATGTCTACCCAA.........................................................................................................................................................................................................................................2170.14100000010000000000
..........................................................................................................................................................................................................................................................................................TACCCAAG-------T---------GCCACAGCAAACCAA........................................................................................................................................................................................................2470.14100000001000000000
............................................................................................................................................................................................................TCAGCAAGCC---CT-------GCACTACCAAGCTCC.........................................................................................................................................................................................................................................................................................2770.14100000000000010000
................................................................................................................................................................................................................................................................................CGCTCATGTCTACCCAAG-------T---------GC.....................................................................................................................................................................................................................2170.14100000000010000000
........................................................................................................................................................................................................................................................................CAAAGATGCGCTCATGTCTACCCAAG-------T---------G......................................................................................................................................................................................................................2870.14100000000000010000
........................................................................................................................................................................................................................................................................CAAAGATGCGCTCATGTCTACCCAAT-------A---------.......................................................................................................................................................................................................................2770.14100000000000010000
........................................................................................................................................................................................................................................................................................TCTACCCAAG-------T---------GCCACAGCAAACCAA........................................................................................................................................................................................................2670.14100000000010000000
......................................................................................................................................................................................................................................................................................TGTCTACCCAAG-------T---------GCCACAGCAAACC..........................................................................................................................................................................................................2670.14100000001000000000
...................................................................................................................................................................................................................................................................................TCATGTCTACCCAAG-------T---------GCCACAGCAA.............................................................................................................................................................................................................2670.14100000001000000000
...........................................................................................................................................................................................................................................................................AGATGCGCTCATGTCTACCCAAG-------T---------GC.....................................................................................................................................................................................................................2670.14100000001000000000
............................................................................................................................................................................................................................................................................GATGCGCTCATGTCTACCCAAG-------T---------GCC....................................................................................................................................................................................................................2670.14100000000001000000
...................................................................................................................................................................................................................................................................................TCATGTCTACCCAAG-------T---------GCCACA.................................................................................................................................................................................................................2270.14100000010000000000
........................................................................................................................................................................................................................................................................CAAAGATGCGCTCATGTCTACCC...........................................................................................................................................................................................................................................2370.14100000000000010000
.................................................................................................................................................................................................................................................................TGAGCTACAAAGATGCGCTCATGTCTAC.............................................................................................................................................................................................................................................2880.13100010000000000000
......................................................................................................................................................................................................................................................................TACAAAGATGCGCTCATGTCT...............................................................................................................................................................................................................................................2180.13100000001000000000
........................................................................................................................................................................................................................................................................CAAAGATGCGCTCATGTCTACC............................................................................................................................................................................................................................................2290.11100000000000010000
.................................................................................................................................................................................................................................................................TGAGCTACAAAGATGCGCTCATGTC................................................................................................................................................................................................................................................2590.11100000000010000000
.....................................................................................................................................................................................................................................................................CTACAAAGATGCGCTCATG..................................................................................................................................................................................................................................................1990.11100000000001000000
......................................................................................................................................................................................................................................................................TACAAAGATGCGCTC.....................................................................................................................................................................................................................................................15100.10100000000001000000
...............................................................................................................................................................................................................................................................TATGAGCTACAAAGATGCGCT......................................................................................................................................................................................................................................................21100.10100000000001000000
........................................................................................................................................................................................................................................................................CAAAGATGCGCTCATGTCTGT.............................................................................................................................................................................................................................................21100.10100000000000001000
................................................................................................................................................................................................................................................................ATGAGCTACAAAGATGCGCT......................................................................................................................................................................................................................................................20100.10100000000001000000
.................................................................................................................................................................................................................................................................TGAGCTACAAAGATGCGCTCA....................................................................................................................................................................................................................................................21100.10100000000001000000
droSec2
GAGGGA-GGACGACAAAGCGTGCTGCTTCCACTGCCAGGCGGACCATCCTGCGTCTTTCAAGGGATGCCCTGCATACAAAAGGGCC-----------AAAGCACTC---------------------------------GCTGCTCCGA---AAACAAGG-CCCGTC------------------------------GCTAATGCTAACAAGGCGCCGCCCGTG--GCATCACCAAAC------GTCACCTCTGGCAGGAGCTACCGAGACGCCCTCAAC----------GG---AGTGCACGCAGCACCGCAG---AATC----------------CC-------------------------------------------------------------------------ACA-AC-------CC--CAGTCCAAACCCAAACAGA---------------AAC--------------CCCACAC---------------------------------TCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........GACGACAAAGCGTGCTGCTTCCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.2044000
................................................................................................................................................TCCGA---AAACAAGG-CCCGTC------------------------------GCTAAT...............................................................................................................................................................................................................................................................................................................................25200.1022000
..............................................................................................................................................................................................................................................................................................................GCAGCACCGCAG---AATC----------------CC-------------------------------------------------------------------------ACA-AC-------CC--.............................................................................................25200.0511000
..................................................................................................................................................................................................................................................................................CTCAAC----------GG---AGTGCACGCAGCA......................................................................................................................................................................................................................21200.0510001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................CC--CAGTCCAAACCCAAACAGA---------------AAC--------------CC........................................26200.0511000
......................................................................................................ACTC---------------------------------GCTGCTCCGA---AAACAAG...........................................................................................................................................................................................................................................................................................................................................................................21200.0510010
...........................................................................................................................................................................................................................................AAC------GTCACCTCTGGCAGGAGC....................................................................................................................................................................................................................................................................21200.0510001
..........................................................................................................................................................................................................................................................TCTGGCAGGAGCTACCGAGAC...........................................................................................................................................................................................................................................................21200.0510001
droYak3
GAGGAC-GAG----AAGGCATGCTGCCTTCACTGCCAAGCTGACCACCCCGCTTCATACAGAGGATGCCCTGCCTACAAGAAGGCC-----------AAGGCACAG---------------------------------CAAGCCCCCA---AACCCAGA-CCGGCT------------------------------ACATCTACCAGCAAGCC---CA-------GCACCATCCAGATCCCA-AACATCTCCAATATGAGCAATAAAGACGCGCTTAAGTCCACTCAAG-------C---------ACCACAGCAATCCGAT-------------CCC------AACCAAAAC--------------------------------------------------------CGCC---------------------AAACCCCACCTGA---------------AGC--------------TCCGCAATCCAGTAA------------------------CTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................................GCTTCATACAGAGGATGCCCTGCCTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................26212.0024000000000024
.................................................................................................................................................................CCGGCT------------------------------ACATCTACCAGCAAGCC---CA-------GC......................................................................................................................................................................................................................................................................................................2726.0012001000000011
..................................................GCTTCATACAGAGGATGCCCTGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................2424.50906300000000
........................................................................................................................................................................................................................................................................................................................AGCAATCCGAT-------------CCC------AACCAAAAC--------------------------------------------------------CGC.............................................................................................................2623.50706100000000
................................................................................................................................................................................................................................................................ATGAGCAATAAAGACGCGCTTAAGTCCAC.............................................................................................................................................................................................................................................2913.00300000000003
........................................................................................................................................................................................................................................................................................................................AGCAATCCGAT-------------CCC------AACCAAAAC--------------------------------------------------------CGCC---------------------.......................................................................................2723.00606000000000
..........................................................................................................................................................................................................TACCAGCAAGCC---CA-------GCACCATCCAGA............................................................................................................................................................................................................................................................................................2622.00404000000000
................................................................................................................................................................................................................................................................ATGAGCAATAAAGACGCGCTTAAGTCC...............................................................................................................................................................................................................................................2712.00202000000000
....................................................................................................................................................................GCT------------------------------ACATCTACCAGCAAGCC---CA-------GCACCA..................................................................................................................................................................................................................................................................................................2822.00404000000000
..................................................GCTTCATACAGAGGATGCCCTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2322.00404000000000
..................................................GCTTCATACAGAGGATGCCCTGCCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2521.50303000000000
....................................................................................................................................................................GCT------------------------------ACATCTACCAGCAAGCC---CA-------G.......................................................................................................................................................................................................................................................................................................2321.50303000000000
.............................................................................................................................................................................................................................................ATCCCA-AACATCTCCAATATGAG.....................................................................................................................................................................................................................................................................2311.00101000000000
.............................................................................................................................................................................................................................................................................................................................TCCGAT-------------CCC------AACCAAAAC--------------------------------------------------------CGCC---------------------AAAC...................................................................................2621.00201100000000
..........................................................................................................................................................................................................................................................TCCAATATGAGCAATAAAGACGCGCT......................................................................................................................................................................................................................................................2611.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................C---------------------AAACCCCACCTGA---------------AGC--------------TCCGCAATC.................................2621.00202000000000
.................................................................................................................................................................................................................................................................TGAGCAATAAAGACGCGCTTAAGTCCACT............................................................................................................................................................................................................................................2911.00101000000000
................................................................................................................................................................................................................................................................ATGAGCAATAAAGACGCGCTTAAGTC................................................................................................................................................................................................................................................2611.00101000000000
........................................................................................................................................................................................................................................................................................................................AGCAATCCGAT-------------CCC------AACCAAAAC--------------------------------------------------------CG..............................................................................................................2521.00202000000000
..................................................GCTTCATACAGAGGATGCCCTGCCTAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2721.00202000000000
.............................................................................................................................................................................................................................................................AATATGAGCAATAAAGACGCGCTTAAG..................................................................................................................................................................................................................................................2711.00101000000000
.............................................................................................................................................................................................................................................................................................TCAAG-------C---------ACCACAGCAATCCGAT-------------CCC------.................................................................................................................................................................................2521.00201100000000
..................................................GCTTCATACAGAGGATGCCCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2221.00201100000000
..................................................................................................................................................................................................................................................................................................................................T-------------CCC------AACCAAAAC--------------------------------------------------------CGCC---------------------AAACCCCACC.............................................................................2721.00202000000000
..........................................................................TACAAGAAGGCC-----------AAGGCACAG---------------------------------CAAGCC.........................................................................................................................................................................................................................................................................................................................................................................................2721.00201100000000
................................................................................................................................................................................................................................................................................................................................................CCC------AACCAAAAC--------------------------------------------------------CGCC---------------------AAACCCCACC.............................................................................2621.00201100000000
............................................................................................................................................................................................................................................................................GACGCGCTTAAGTCCACTCAAG-------C---------ACCAC..................................................................................................................................................................................................................2811.00101000000000
......................................................................................................................................................................T------------------------------ACATCTACCAGCAAGCC---CA-------GCACCA..................................................................................................................................................................................................................................................................................................2620.50101000000000
........................................................................................................................................................................................................................................TCCAGATCCCA-AACATCTCCAAA..........................................................................................................................................................................................................................................................................2320.50101000000000
....................................................................................................................................................................GCT------------------------------ACATCTACCAGCAAGCC---CA-------GCACCAT.................................................................................................................................................................................................................................................................................................2920.50101000000000
.................................................................................................................................................CCCA---AACCCAGA-CCGGCT------------------------------ACATCTACC............................................................................................................................................................................................................................................................................................................................2720.50100100000000
..................................................GCTTCATACAGAGGATGCCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.50101000000000
.................................................................................................................................................................................................................................................................................................................................................CC------AACCAAAAC--------------------------------------------------------CGCC---------------------AAACCCCACCT............................................................................2620.50101000000000
............................................CACCCCGCTTCATACAGAGGATGCCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.50100100000000
.........................................GACCACCCCGCTTCATACAGAGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.50101000000000
...................................................................................................................................................CA---AACCCAGA-CCGGCT------------------------------ACATCTACCAGC.........................................................................................................................................................................................................................................................................................................................2820.50101000000000
..............AAGGCATGCTGCCTTCACTGCCAAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.50101000000000
.............................................................................................................................................................................................................................................................................................................................TCCGAT-------------CCC------AACCAAAAC--------------------------------------------------------CGCC---------------------AAACCC.................................................................................2820.50101000000000
....................................................................................................................................................................GCT------------------------------ACATCTACCAGCAAGCC---CA-------GCAC....................................................................................................................................................................................................................................................................................................2620.50101000000000
............................................................................................................................................................................................................................................................................................CTCAAG-------C---------ACCACAGCAATCCGA........................................................................................................................................................................................................2220.50101000000000
........................................................................................................................................................................................................................................................................................................................AGCAATCCGAT-------------CCC------AACCA............................................................................................................................................................................1920.50101000000000
....................................................................................................................................................................GCT------------------------------ACATCTACCAGCAAGCC---CA-------GCA.....................................................................................................................................................................................................................................................................................................2520.50101000000000
.........................................................................................................................................................................................................CTACCAGCAAGCC---CA-------GCACCATCCAGA............................................................................................................................................................................................................................................................................................2720.50101000000000
....................................................................................................................................................................................................................................ACCATCCAGATCCCA-AACATCTCC.............................................................................................................................................................................................................................................................................2420.50100100000000
.........................................................................................................................................................................................................................................................................................................................GCAATCCGAT-------------CCC------AACCAAAAC--------------------------------------------------------CGCC---------------------.......................................................................................2620.50101000000000
...................................................CTTCATACAGAGGATGCCCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.50101000000000
.......................................................ATACAGAGGATGCCCTGCCTACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.50101000000000
..........................................................................................................................................................................................................TACCAGCAAGCC---CA-------GCACCATCCAGATCC.........................................................................................................................................................................................................................................................................................2920.50101000000000
...............................................................................GAAGGCC-----------AAGGCACAG---------------------------------CAAGCCCCCA---A.................................................................................................................................................................................................................................................................................................................................................................................2720.50101000000000
...............................................................................................................................................................................................................................................................................................................................................................AAC--------------------------------------------------------CGCC---------------------AAACCCCACCTGA---------------AGC--------------..........................................2320.50100100000000
........................................TGACCACCCCGCTTCATACAGAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.50101000000000
.............................................................................................................................................................................................................................................................................................TCAAG-------C---------ACCACAGCAATCCGAT-------------CCC------A................................................................................................................................................................................2620.50101000000000
...........................TTCACTGCCAAGCTGACCACCCCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.50100100000000
..............................................................................................................................................................GA-CCGGCT------------------------------ACATCTACCAGCAAGCC---C................................................................................................................................................................................................................................................................................................................2620.50100100000000
............................................................................CAAGAAGGCC-----------AAGGCACAG---------------------------------CA.............................................................................................................................................................................................................................................................................................................................................................................................2120.50101000000000
..........................................................................................................................................................................................................................................................................................................................................................ACCAAAAC--------------------------------------------------------CGCC---------------------AAACCCCACCTGA---------------AGC--------------..........................................2820.50101000000000
........................................................................................................................................................................................................TCTACCAGCAAGCC---CA-------GCACCATCCAGA............................................................................................................................................................................................................................................................................................2820.50101000000000
............................................................GAGGATGCCCTGCCTACAAGAAGGCC-----------.........................................................................................................................................................................................................................................................................................................................................................................................................................................2620.50100100000000
........................................................................................................................................................................................................................................TCCAGATCCCA-AACATCTCCAATA.........................................................................................................................................................................................................................................................................2420.50101000000000
.................................................................................................................................................................................................................................................................................................................................................CC------AACCAAAAC--------------------------------------------------------CGCC---------------------AAACCCCAC..............................................................................2420.50101000000000
.......................TGCCTTCACTGCCAAGCTGACCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.50101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTGA---------------AGC--------------TCCGCAATCCAGTAA------------------------CC.2720.50100100000000
........................................................................................................................................................................................................................................................................................................................AGCAATCCGAT-------------CCC------AACCAAAAC--------------------------------------------------------C...............................................................................................................2420.50101000000000
.......................................................................................................................................................................................................ATCTACCAGCAAGCC---CA-------GCACCATC................................................................................................................................................................................................................................................................................................2520.50101000000000
........................................TGACCACCCCGCTTCATACAGAGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.50101000000000
.....................................................................................C-----------AAGGCACAG---------------------------------CAAGCCCCCA---AACCC.............................................................................................................................................................................................................................................................................................................................................................................2520.50101000000000
.........................................................................................................................................................................................................................................CCAGATCCCA-AACATCTCCAAT..........................................................................................................................................................................................................................................................................2220.50101000000000
........................GCCTTCACTGCCAAGCTGACCACCCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.50101000000000
....................TGCTGCCTTCACTGCCAAGCTGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.50101000000000
.............................................................................................................................................................................................................................................................................................TCAAG-------C---------ACCACAGCAATCCGAT-------------CCC------AAC..............................................................................................................................................................................2820.50100100000000
..........................................................................................................................................................................................................TACCAGCAAGCC---CA-------GCACCAT.................................................................................................................................................................................................................................................................................................2120.50101000000000
.............................................................................AAGAAGGCC-----------AAGGCACAG---------------------------------CAAGCC.........................................................................................................................................................................................................................................................................................................................................................................................2420.50100100000000
..............................................................................................................................................................................................................................................................................................CAAG-------C---------ACCACAGCAATCCGAT-------------CCC------AAC..............................................................................................................................................................................2720.50100100000000
..................................................................................................................................................................CGGCT------------------------------ACATCTACCAGCAAGCC---CA-------GC......................................................................................................................................................................................................................................................................................................2620.50100100000000
...........................................................................ACAAGAAGGCC-----------AAGGCACAG---------------------------------CAAGCC.........................................................................................................................................................................................................................................................................................................................................................................................2620.50101000000000
............................................................................................................................................................................................................CCAGCAAGCC---CA-------GCACCATCCAGA............................................................................................................................................................................................................................................................................................2420.50100010000000
.....................................................................................................................................................................CT------------------------------ACATCTACCAGCAAGCC---CA-------GCACC...................................................................................................................................................................................................................................................................................................2620.50101000000000
....................................................................................................................................................................GCT------------------------------ACATCTACCAGCAAGCC---CA-------GC......................................................................................................................................................................................................................................................................................................2420.50101000000000
........................................TGACCACCCCGCTTCATACAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.50101000000000
........................................................................................................AG---------------------------------CAAGCCCCCA---AACCCAGA-CCGGC....................................................................................................................................................................................................................................................................................................................................................................2540.25100100000000
droEre2
GAGGAC-GAG----AAGGAATGCTGCCTTCACTGCCAAGCCGACCACCCTGCTTCGTTCAGAGGATGCCCTGCTTACAAGAAGGCC-----------AAGGCACAG---------------------------------CAAGCCCCCA---AACCCAGA-CCGGCC------------------------------ACATATACCAGCAAGCC---CT-------GCACCGTCCAGATCCCA-AATATCTCCAATATGAGCTACAAAGACGCGCTCAA----------G-------T---------GCCACAGCAAACTAAT-------------CCA------AACCAAACC--------------------------------------------------------CGCC---------------------AAACCCCACCAGA---------------AGC--------------TCCGCAATCCAGTAATCTGG-------------------AACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 06/08/2015 at 04:11 PM