ID:

dpe_1431

 Coordinate:

scaffold_30:821498-821648 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.1 -6.9 -6.7

Flybase annnotation

CDS [Dper\GL18340-cds]; exon [dper_GLEANR_20376:3]; intron [Dper\GL18340-in]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TTTTTCTTCCTCGCTATATTTTTCGTTCATCATTTGGGACTTTTGTGCGGCGATGCATCTGGACCTAGCCGATTGAGATCGGGGATTGCGCACGGCTTCCATGACGACAAGAGATTTTGTTTCACTAACTATTTCACTTTCAAAGAAACTTAAAACGCTTATAGAATATTTAATAAAAAATTTATATTTTGTAATTTTCAGCTGGCTCGGAAAGGTCTGAAGCTGGTACTGATTAGTCGATCGTTGAATAA
**********************************************************************....((((((.....(((((((.((...)).)).)).)))..)))))).************************************************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total V111
male body		 M021
embryo
 M042
female body
 V050
head
 V057
head
......................................................................GATTGAGATCGGGGATTGC.................................................................................................................................................................. 19 0 1 32.00 32 32 0 0 0 0
......................................................................GATTGAGATCGGGGATTGCGC................................................................................................................................................................ 21 0 1 28.00 28 27 0 1 0 0
......................................................................GATTGAGATCGGGGATTGCG................................................................................................................................................................. 20 0 1 26.00 26 26 0 0 0 0
......................................................................GATTGAGATCGGGGATTG................................................................................................................................................................... 18 0 1 8.00 8 8 0 0 0 0
.....................................................................CGATTGAGATCGGGGATTG................................................................................................................................................................... 19 0 1 7.00 7 7 0 0 0 0
...................................................................................................CATGACGACAAGAGATTTTG.................................................................................................................................... 20 0 1 4.00 4 3 0 0 1 0
...........................CATCATTTGGGACTTTTGTG............................................................................................................................................................................................................ 20 0 1 3.00 3 3 0 0 0 0
.............................................................GACCTAGCCGATTGAGATCG.......................................................................................................................................................................... 20 0 1 3.00 3 3 0 0 0 0
...................................................................................................CATGACGACAAGGGATTTTATCTC................................................................................................................................ 24 3 1 3.00 3 0 3 0 0 0
...................................................................................................................................................................................ATTTATATTTTGTAATTTTCAGCTGGCTC........................................... 29 0 1 3.00 3 0 3 0 0 0
..............................................................................................GCTTCCATGACGACAAGAG.......................................................................................................................................... 19 0 1 2.00 2 2 0 0 0 0
................................TTTGGGACTTTTGTGCGGC........................................................................................................................................................................................................ 19 0 1 2.00 2 2 0 0 0 0
...............................ATTTGGGACTTTTGTGCGGC........................................................................................................................................................................................................ 20 0 1 2.00 2 2 0 0 0 0
.....................................................TGCATCTGGACCTAGCCGATT................................................................................................................................................................................. 21 0 1 2.00 2 2 0 0 0 0
.....................................................................CGATTGAGATCGGGGATTGCG................................................................................................................................................................. 21 0 1 2.00 2 2 0 0 0 0
...................................................GATGCATCTGGACCTAGCCGATTGA............................................................................................................................................................................... 25 0 1 2.00 2 2 0 0 0 0
..................................................CGATGCATCTGGACCTAGCCGTCA................................................................................................................................................................................. 24 3 1 2.00 2 2 0 0 0 0
...............................ATTTGGGACTTTTGTGCGGCGA...................................................................................................................................................................................................... 22 0 1 2.00 2 2 0 0 0 0
.................................................................................................................................................................................................................GAAAGGTCTGAAGCTGGTACTGA................... 23 0 1 2.00 2 0 2 0 0 0
..................................................CGATGCATCTGGACCTAGCCG.................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
..............................................GCGGCGATGCATCTGGACCTAGCC..................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0
..................................................................................................................................................................................................................AAAGGTCTGAAGCTGGTACTG.................... 21 0 1 1.00 1 1 0 0 0 0
....................................GGACTTTTGTGCGGCGATGC................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
.......................................................CATCTGGACCTAGCCGATTGA............................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................................................AAGGTCTGAAGCTGGTACTGATT................. 23 0 1 1.00 1 0 1 0 0 0
......................................................................GATTGGGATCGGGGATTGCG................................................................................................................................................................. 20 1 1 1.00 1 1 0 0 0 0
.............................TCATTTGGGACTTTTGTGCGG......................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................CTCGGAAAGGTCTGAAGCTG.......................... 20 0 1 1.00 1 0 0 1 0 0
.................................................................TAGCCGATTGAGATCGGGGATTGC.................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0
.............................................TGCGGCGATGCATCTGGAC........................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................................................GGTCTGAAGCTGGTACTGA................... 19 0 1 1.00 1 0 0 1 0 0
.....................................................................CGATTGAGATCGGGGATTGC.................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0
............................................GTGCGGCGATGCATCTGGACC.......................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0
............................................GTGCGGCGATGCATCTGGAC........................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
......................................................................GATTGAGACCGGGGATTGCGC................................................................................................................................................................ 21 1 1 1.00 1 1 0 0 0 0
..........................................................................................CACGGCTTCCATGACGAC............................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0
..................................................................................................................................................................................................................AAAGGTCTGAAGCTGGTACT..................... 20 0 1 1.00 1 0 1 0 0 0
...............................................................................................................................................................................................................CGGAAAGGTCTGAAGCTGGT........................ 20 0 1 1.00 1 1 0 0 0 0
..............................CATTTGGGACTTTTGTGCGG......................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
.........................................................TCTGGACCTAGCCGATTGA............................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0
......................................................................GATTGAGATCGGGGATTGCC................................................................................................................................................................. 20 1 1 1.00 1 1 0 0 0 0
...................................................................................................CATGACGACAAGAGATTTT..................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0
....................................................ATGCATCTGGACCTAGCCGA................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
...............................ATTTGGGACTTTTGTGCGG......................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0
.....................................................................CGATTGAGATCGGGGATTGT.................................................................................................................................................................. 20 1 1 1.00 1 1 0 0 0 0
............................ATCATTTGGGACTTTTGTGCG.......................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
......................................................................GATTGACATCGGGGATTGC.................................................................................................................................................................. 19 1 1 1.00 1 1 0 0 0 0
................................................................................GGGGATTGCGCACGGCTTC........................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0
....................................................................................................ATGAAGACTAGAGATTTTGTT.................................................................................................................................. 21 2 1 1.00 1 0 0 0 0 1
...................................................GATGCATCTGGACCTAGCCG.................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
...........................................................TGGACCTAGCCGATTGAGATCG.......................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
........................................................ATCTGGACCTAGCCGATTG................................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0
....................................................................................................AGGACGACTAGAGCTTTTGTT.................................................................................................................................. 21 3 3 0.33 1 0 0 0 0 1
....................................................................................................ATGACGACAAGGGATTCTAT................................................................................................................................... 20 3 4 0.25 1 0 1 0 0 0

Anti-sense strand reads

AAAAAGAAGGAGCGATATAAAAAGCAAGTAGTAAACCCTGAAAACACGCCGCTACGTAGACCTGGATCGGCTAACTCTAGCCCCTAACGCGTGCCGAAGGTACTGCTGTTCTCTAAAACAAAGTGATTGATAAAGTGAAAGTTTCTTTGAATTTTGCGAATATCTTATAAATTATTTTTTAAATATAAAACATTAAAAGTCGACCGAGCCTTTCCAGACTTCGACCATGACTAATCAGCTAGCAACTTATT
************************************************************************************************************************************....((((((.....(((((((.((...)).)).)).)))..)))))).********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M021
embryo
 M042
female body
 V057
head
 V042
embryo
 V111
male body
......................................................................................................................CAAAGTCCTTGATAAAGTG.................................................................................................................. 19 2 1 32.00 32 10 18 3 1 0
.....................................................................................................................CCAAAGTCCTTGATAAAGTG.................................................................................................................. 20 3 5 8.00 40 29 6 0 3 2
.....................................................................................................................CCAAAGTCCTTGATAAAGTGA................................................................................................................. 21 3 2 6.50 13 12 1 0 0 0
......................................................................................................................CAAAGTCCTTGATAAAGTGAG................................................................................................................ 21 3 1 6.00 6 5 0 0 1 0
....................................................................................................................ACCAAAGTCCTTGATAAAGTG.................................................................................................................. 21 3 1 1.00 1 0 1 0 0 0
......................................................................................................................CAAAGTCCTTGATAAAGTGA................................................................................................................. 20 2 1 1.00 1 0 1 0 0 0
....................................................................................................................ACCAAAGTCCTTGATAAAGTGA................................................................................................................. 22 3 1 1.00 1 0 1 0 0 0
.......................................................................................................................AAAGTCCTTGATAAAGTG.................................................................................................................. 18 2 7 0.57 4 0 2 0 2 0
.......................................................................................................................AAAGTCCTTGATAAAGTGA................................................................................................................. 19 2 4 0.25 1 0 1 0 0 0
.......................................................................................................................AAAGTCCTTGATAAAGTGAG................................................................................................................ 20 3 11 0.18 2 0 0 0 2 0
...........................................................................TCTGGCCCCTAAAGCGTGG............................................................................................................................................................. 19 3 6 0.17 1 0 0 1 0 0
........................................................................................................................AAGTCCTTGATAAAGTGA................................................................................................................. 18 2 11 0.09 1 0 0 0 1 0
....................................................................................................................ACCAAAGTCCTTGATAAAG.................................................................................................................... 19 3 20 0.05 1 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_30:821448-821698 + dpe_1431 TTTTTCTTCCTCGCTATATTTTTCGTTCA-------------------------TCATTTGGGACTTTTGTGCGGCG----------------------ATG-CATCTGGACCTAGCCGATTGAGATCGGGGATTGCGCACGGCTTCCATGACGACAAGAGATTTTGTTTCA----CTAACTATT------------TCACTTTCAAAGAAACT-----------TAAAACGCTTATAGAATATTTAAT------------------AAAA------------------------------AATTTATATTTT--GTAATTTTCAGCTGGCTCGGAAAGGTCTGAAGCTGGTACTGATTAGTCGATCGTTGAATAA
dp5 XL_group1e:398410-398664 - dps_2601 TTTTTCTTCCTCGCTATATTTTTCGTTCA-------------------------TCATTTGAGCCTTTTGTGCGGCA----------------------ATG-CAACTGGACCTTGCCGATTGGGATCGGGGATTGCGAACGGCTTCCATGACGACAAGAGATTTTGTTTCACTCACTAACTATT------------TCACTTTCAAAGAAACT-----------TAAAACGCTTATAGAATACTTAAT------------------AAAA------------------------------AATGTATATTTT--GTAATTTTCAGCTGGCTCGGAAAGGTCTGAAGCTGGTACTGATTAGTCGATCGTTGAATAA
droWil2 scf2_1100000004909:9669971-9670053 + TTTTTTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAA------------------------------TATTCATTTCTT--ATGTTTTGCAGTTGGCACGCCGTGGTCTAAAACTAGTGCTGATCAGTCGATCGCTGGATAA
droVir3 scaffold_13042:2171971-2172037 - T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTA--AAACTTTGCAGTTGGCACGCAAAGGCCTGAAACTGGTTTTGATTAGTCGCTCGTTGGAAAA
droMoj3 scaffold_6359:2072872-2072931 - TA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTCTAGTTGGCGCGCAAGGGACTGAAATTGGTATTGATTTCGCGATCCTTGGACAA
droGri2 scaffold_14853:3463080-3463170 - ATATTTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------------------AAATAACTTTATTATTTG-----------------------TCGT--GCAATTTGCAGTTGGCACGCAAAGGAATGAAACTGGTGTTGATTAGTCGCTCGTTGGAGAA
droAna3 scaffold_13117:788538-788666 + CTATTTTA---------------GGTTCAGAAAGGTCTTTTTAGGCTTTCACATTCATTTGAGACTATATTGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACTTTGTCC-CTTACCCTCAGCTGGCCCGCCGAGGACTGAAGCTGGTGCTGATCAGCCGATCGCTGGAGAA
droBip1 scf7180000396412:700660-700757 + CTTATAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTTTAAT------------------A-----------------------------AAATAACAATCATCTCCCTATTTTTCTAGCTGGCCAGCCGAGGACTGAAGCTGGTTCTGATCAGTCGTTCGCTGGACAA
droKik1 scf7180000302696:1669152-1669264 + TATTCCCA-------TTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA---------TAATT-----------AAAAATGATTCAGAAATATCAAAT------------------TA-------------ATTG-----------------------ATGT--GTCCTTTTCAGCTGGCTCGCCGGGGCCTGAAACTGGTGCTGATCAGTAGATCACTGGATAA
droFic1 scf7180000454045:1267708-1267813 + CTAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACCACATATAAAACTTTTAAT------------------T-------------------------T-TAAATACATTTTTATTT---AAAACTTTTAGTTGGCGCGTCGGGGACTGAAGTTGGTGCTGATCAGTAGGTCTTTGGAAAA
droEle1 scf7180000491044:643938-644024 - TTAAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--------------------------------------------------C-TAAATCAATATTTATTTA--CACGTTTTTAGCTGGCTCGCAGGGGCTTGAAGCTAGTGCTGATAAGTAGATCCCTGGAAAA
droRho1 scf7180000779479:13821-13933 - AAAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATT-----------CTCAACCT--------------------------------------------TTATGCTTGCTGTATTA-TAAATTAATATTTATTTA--ACTCATTTTAGCTGGCTCGCAGGGGACTGAAACTTGTGCTGATCAGTAGATCGTTGGAAAA
droBia1 scf7180000301774:11692-11747 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCAGCTGGCTCGCAGGGGCCTGAAACTGGTGCTGATCAGCAGATCCCTGGAAAA
droTak1 scf7180000415262:118207-118336 + TATTTTTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACTAAAGAAGCA-----------TTAGA------------------TAATAAGTATATATTTAAAGAAT---------------------ATT-GTAATAACATCTATGTA--ACCCATTTTAGCTGGCTCGCCGGGGCCTGAAACTGGTGCTGATCAGTAGATCCCTGGATAA
droEug1 scf7180000409830:55523-55605 + AAAATAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAA--------------------------------TAAATGTTAAAATTTTTCCTTAGTTGGCTCGCAGAGGACTGAAACTAGTGCTAATCAGTAGATCCCTGGAAAA
dm3 chrX:7804719-7804791 + A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAATATTTA--ATCACTTTCAGTTGGCTCGCAGGGGCTTGAAACTGGTGCTGATTAGTAGATCCCTGGAGAA
droSim2 x:7368560-7368632 + A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAATATTTA--ATTACTTTCAGCTGGCTCGCAGGGGCTTAAAGCTGGTGCTGATTAGTAGATCCCTGGAGAA
droSec2 scaffold_50:91540-91648 + ATTTCCTA----------------------------------------------------------------TCCAAAAGTACGTAGATATGGGCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCTAATAAATATTTA--ATCACTTTCAGCTGGCTCGCAGGGGCTTGAAGCTGGTGCTGATTAGTAGATCCCTGGAGAA
droYak3 X:13508531-13508767 - TTTTTCTTCGCCCCATTTTATTTTATCTC-------------------------TTATCTAGGAATTTACTATCCAAAAGTACGTAAATATGAGCAGCCCTG-TAT------------------------------------------------------AATTTTCAGTCA----AACTATACC------------ACAATTTGTAGAAAACTTAAGTAATAGTTA--------ATTCAATACA--------------------------------TTAAGCATTCTGAATATG-TTATTAATAAATATTTA--ATCAATTGCAGCTGGCGCGCAGGGGCCTGAAGCTGGTGCTGATTAGTAGATCCCTGGAAAA
droEre2 scaffold_4690:16716194-16716452 + TTTTTCTTCGCTCCATTGCTTTTTATCTC-------------------------TTATCTAAGAATTTACTTTCCAAAAGTACGTAAATATGAGCAGGACGGTTAT------------------------------------------------------AATTTTTAAACG----AACTATACCTTGTATGATACAACATTTGGCAGAAGACTTAAATAACAGTTAGAACATTTATACAATACA--------------------------------ACACAGCTTCTGAGTATGTAAGTTAATAAACATTTA--ATCACTTTCAGCTGGCTCGCAGGGGCCTGAAGCTGGTGCTGATTAGTAGATCCCTGGAAAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
TTTTTCTTCCTCGCTATATTTTTCGTTCA-------------------------TCATTTGGGACTTTTGTGCGGCG----------------------ATG-CATCTGGACCTAGCCGATTGAGATCGGGGATTGCGCACGGCTTCCATGACGACAAGAGATTTTGTTTCA----CTAACTATT------------TCACTTTCAAAGAAACT-----------TAAAACGCTTATAGAATATTTAAT------------------AAAA------------------------------AATTTATATTTT--GTAATTTTCAGCTGGCTCGGAAAGGTCTGAAGCTGGTACTGATTAGTCGATCGTTGAATAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................................................................................GATTGAGATCGGGGATTGC...............................................................................................................................................................................................................................................19132.00320000032
......................................................................................................................GATTGAGATCGGGGATTGCGC.............................................................................................................................................................................................................................................21128.00280100027
......................................................................................................................GATTGAGATCGGGGATTGCG..............................................................................................................................................................................................................................................20126.00260000026
......................................................................................................................GATTGAGATCGGGGATTG................................................................................................................................................................................................................................................1818.008000008
.....................................................................................................................CGATTGAGATCGGGGATTG................................................................................................................................................................................................................................................1917.007000007
...................................................................................................................................................CATGACGACAAGAGATTTTG.................................................................................................................................................................................................................2014.004000103
...........................CA-------------------------TCATTTGGGACTTTTGTG................................................................................................................................................................................................................................................................................................................2013.003000003
.............................................................................................................GACCTAGCCGATTGAGATCG.......................................................................................................................................................................................................................................................2013.003000003
..............................................................................................................................................................................................................................................................................................................ATTTATATTTT--GTAATTTTCAGCTGGCTC...........................................2913.003300000
..............................................................................................................................................GCTTCCATGACGACAAGAG.......................................................................................................................................................................................................................1912.002000002
.........................................................TTTGGGACTTTTGTGCGGC............................................................................................................................................................................................................................................................................................................1912.002000002
........................................................ATTTGGGACTTTTGTGCGGC............................................................................................................................................................................................................................................................................................................2012.002000002
....................................................................................................TG-CATCTGGACCTAGCCGATT..............................................................................................................................................................................................................................................................2112.002000002
.....................................................................................................................CGATTGAGATCGGGGATTGCG..............................................................................................................................................................................................................................................2112.002000002
............................................................................G----------------------ATG-CATCTGGACCTAGCCGATTGA............................................................................................................................................................................................................................................................2512.002000002
...........................................................................CG----------------------ATG-CATCTGGACCTAGCCGTCA..............................................................................................................................................................................................................................................................2412.002000002
........................................................ATTTGGGACTTTTGTGCGGCG----------------------A....................................................................................................................................................................................................................................................................................2212.002000002
..............................................................................................................................................................................................................................................................................................................................................GAAAGGTCTGAAGCTGGTACTGA...................2312.002200000
...........................................................................CG----------------------ATG-CATCTGGACCTAGCCG.................................................................................................................................................................................................................................................................2111.001000001
.......................................................................GCGGCG----------------------ATG-CATCTGGACCTAGCC..................................................................................................................................................................................................................................................................2411.001100000
...............................................................................................................................................................................................................................................................................................................................................AAAGGTCTGAAGCTGGTACTG....................2111.001000001
.............................................................GGACTTTTGTGCGGCG----------------------ATG-C................................................................................................................................................................................................................................................................................2011.001000001
.......................................................................................................CATCTGGACCTAGCCGATTGA............................................................................................................................................................................................................................................................2111.001000001
................................................................................................................................................................................................................................................................................................................................................AAGGTCTGAAGCTGGTACTGATT.................2311.001100000
......................................................TCATTTGGGACTTTTGTGCGG.............................................................................................................................................................................................................................................................................................................2111.001000001
..........................................................................................................................................................................................................................................................................................................................................CTCGGAAAGGTCTGAAGCTG..........................2011.001010000
.................................................................................................................TAGCCGATTGAGATCGGGGATTGC...............................................................................................................................................................................................................................................2411.001000001
......................................................................TGCGGCG----------------------ATG-CATCTGGAC........................................................................................................................................................................................................................................................................1911.001000001
..................................................................................................................................................................................................................................................................................................................................................GGTCTGAAGCTGGTACTGA...................1911.001010000
.....................................................................................................................CGATTGAGATCGGGGATTGC...............................................................................................................................................................................................................................................2011.001000001
.....................................................................GTGCGGCG----------------------ATG-CATCTGGACC.......................................................................................................................................................................................................................................................................2111.001010000
.....................................................................GTGCGGCG----------------------ATG-CATCTGGAC........................................................................................................................................................................................................................................................................2011.001000001
..........................................................................................................................................CACGGCTTCCATGACGAC............................................................................................................................................................................................................................1811.001010000
...............................................................................................................................................................................................................................................................................................................................................AAAGGTCTGAAGCTGGTACT.....................2011.001100000
............................................................................................................................................................................................................................................................................................................................................CGGAAAGGTCTGAAGCTGGT........................2011.001000001
.......................................................CATTTGGGACTTTTGTGCGG.............................................................................................................................................................................................................................................................................................................2011.001000001
.........................................................................................................TCTGGACCTAGCCGATTGA............................................................................................................................................................................................................................................................1911.001000100
......................................................................................................................GATTGAGATCGGGGATTGCC..............................................................................................................................................................................................................................................2011.001000001
...................................................................................................................................................CATGACGACAAGAGATTTT..................................................................................................................................................................................................................1911.001000001
...................................................................................................ATG-CATCTGGACCTAGCCGA................................................................................................................................................................................................................................................................2011.001000001
........................................................ATTTGGGACTTTTGTGCGG.............................................................................................................................................................................................................................................................................................................1911.001000001
.....................................................................................................................CGATTGAGATCGGGGATTGT...............................................................................................................................................................................................................................................2011.001000001
............................A-------------------------TCATTTGGGACTTTTGTGCG..............................................................................................................................................................................................................................................................................................................2111.001000001
................................................................................................................................GGGGATTGCGCACGGCTTC.....................................................................................................................................................................................................................................1911.001000001
............................................................................G----------------------ATG-CATCTGGACCTAGCCG.................................................................................................................................................................................................................................................................2011.001000001
...........................................................................................................TGGACCTAGCCGATTGAGATCG.......................................................................................................................................................................................................................................................2211.001000001
........................................................................................................ATCTGGACCTAGCCGATTG.............................................................................................................................................................................................................................................................1911.001000001
dp5
TTTTTCTTCCTCGCTATATTTTTCGTTCA-------------------------TCATTTGAGCCTTTTGTGCGGCA----------------------ATG-CAACTGGACCTTGCCGATTGGGATCGGGGATTGCGAACGGCTTCCATGACGACAAGAGATTTTGTTTCACTCACTAACTATT------------TCACTTTCAAAGAAACT-----------TAAAACGCTTATAGAATACTTAAT------------------AAAA------------------------------AATGTATATTTT--GTAATTTTCAGCTGGCTCGGAAAGGTCTGAAGCTGGTACTGATTAGTCGATCGTTGAATAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................................................................................................GATTGGGATCGGGGATTGCG..............................................................................................................................................................................................................................................201203.002030300002101790
......................................................................................................................GATTGGGATCGGGGATTGCGA.............................................................................................................................................................................................................................................21139.003900000020370
......................................................................................................................GATTGGGATCGGGGATTGC...............................................................................................................................................................................................................................................19132.003200000100310
..............................................................................................................................TCGGGGATTGCGAACGGCTTT.....................................................................................................................................................................................................................................21121.002110000000200
..........................................................................................................................GGGATCGGGGATTGCGAACGG.........................................................................................................................................................................................................................................21118.001801000000170
..................TTTTTCGTTCA-------------------------TCATTTGAG.........................................................................................................................................................................................................................................................................................................................20117.001710000000160
.....................................................................................................................CGATTGGGATCGGGGATTG................................................................................................................................................................................................................................................19115.00150100014090
.............................................................................................................GACCTTGCCGATTGGGATCGG......................................................................................................................................................................................................................................................21114.00140100008050
.....................................................................................................................CGATTGGGATCGGGGATTGC...............................................................................................................................................................................................................................................20113.00130000004090
..............................................................................................................................TCGGGGATTGCGAACGGCTTC.....................................................................................................................................................................................................................................21111.00110000007040
........................................................................................................................TTGGGATCGGGGATTGCGAA............................................................................................................................................................................................................................................20111.001100000010100
...............................................................................................................................CGGGGATTGCGAACGGCTTC.....................................................................................................................................................................................................................................20110.00100000001090
.....................................................................................................................CGATTGGGATCGGGGATTGCG..............................................................................................................................................................................................................................................21110.00100000002080
......................................................................................................................GATTGGGATCGGGGATTGCGAACGG.........................................................................................................................................................................................................................................2519.0090000001080
......................................................................................................................GATTGGGATCGGGGATTG................................................................................................................................................................................................................................................1819.0090000000090
........................................................................................................................TTGGGATCGGGGATTGCGAAC...........................................................................................................................................................................................................................................2118.0080000002060
.......................................................................................................................ATTGGGATCGGGGATTGCGA.............................................................................................................................................................................................................................................2017.0070000000070
.............................................................................................................................ATCGGGGATTGCGAACGGC........................................................................................................................................................................................................................................1915.0050000000050
.................ATTTTTCGTTCA-------------------------TCATTTGAG.........................................................................................................................................................................................................................................................................................................................2115.0050000000050
..............................................................................................................................TCGGGGATTGCGAACGGCTT......................................................................................................................................................................................................................................2015.0050000001040
.............................................................................................................GACCTTGCCGATTGGGATCG.......................................................................................................................................................................................................................................................2015.0050201001010
.........................................................................................................................TGGGATCGGGGATTGCGAACG..........................................................................................................................................................................................................................................2115.0050000000050
....................................................................................................................CCGATTGGGATCGGGGATTGC...............................................................................................................................................................................................................................................2114.0040000001030
......................................................................................................................GATTGGGATCGGGGATTGCGT.............................................................................................................................................................................................................................................2114.0040000000040
.........CTCGCTATATTTTTCGTTCA-------------------------TC................................................................................................................................................................................................................................................................................................................................2213.0030001000020
............................................................................................................................GATCGGGGATTGCGAACGG.........................................................................................................................................................................................................................................1913.0030300000000
.......................................................................................................CAACTGGACCTTGCCGATTG.............................................................................................................................................................................................................................................................2013.0030000012000
........................................................................................................AACTGGACCTTGCCGATTGGG...........................................................................................................................................................................................................................................................2113.0030001000020
....................................................................................................................CCGATTGGGATCGGGGATTGCGAACGGC........................................................................................................................................................................................................................................2813.0030000000030
.......................................................................................................................ATTGGGATCGGGGATTGCG..............................................................................................................................................................................................................................................1913.0030000001020
...............................................................................................................................CGGGGATTGCGAACGGCTTA.....................................................................................................................................................................................................................................2013.0030000000030
..................................................................................................................TGCCGATTGGGATCGGGGATTGCGAACG..........................................................................................................................................................................................................................................2813.0030000000030
.........................................................................................................ACTGGACCTTGCCGATTGGG...........................................................................................................................................................................................................................................................2013.0031100000010
......................................................................................................................GATTGGGATCGGGGATTGCGAA............................................................................................................................................................................................................................................2213.0030000000030
...........................................................................................................................GGATCGGGGATTGCGAACGG.........................................................................................................................................................................................................................................2012.0020000000020
....................................................................................................................CCGATTGGGATCGGGGATTG................................................................................................................................................................................................................................................2012.0020200000000
......................................................................................................................GATTGGGATCGGGGATTGCGAAC...........................................................................................................................................................................................................................................2312.0020000001010
....................................................................................................................CCGATTGGGATCGGGGATTGCGAACG..........................................................................................................................................................................................................................................2612.0020000000020
....................................................................................................................CCGATTGGGATCGGGGATTGCGAACGG.........................................................................................................................................................................................................................................2712.0020000000020
.........................................................................................................................TGGGATCGGGGATTGCGAACGG.........................................................................................................................................................................................................................................2212.0020000000020
.......................................................................................................................ATTGGGATCGGGGATTGCGAA............................................................................................................................................................................................................................................2112.0020000000020
........................................................................................................................TTGGGATCGGGGATTGCGAACG..........................................................................................................................................................................................................................................2212.0020000000020
........................................................................................................................TTGGGATCGGGGATTGCGA.............................................................................................................................................................................................................................................1912.0020000001010
......................................................................................................................GATTGGGATCGGGGATTGT...............................................................................................................................................................................................................................................1912.0020000000020
......................................................................................................................GATTGGGATCGGGGATTGCGAACGGC........................................................................................................................................................................................................................................2612.0020000000020
..................................................................................................................TGCCGATTGGGATCGGGGATTG................................................................................................................................................................................................................................................2212.0020000001010
..................................................................TTTGTGCGGCA----------------------ATG-CAACTGGACCTTG....................................................................................................................................................................................................................................................................2712.0020000000020
...................................................................................................................GCCGATTGGGATCGGGGATTGCGAACG..........................................................................................................................................................................................................................................2712.0020000000020
......................................................................................................................................TGCGAACGGCTTCCATGACG..............................................................................................................................................................................................................................2012.0020000002000
................................................................................................................................................................................................................................................................................................................................................AAGGTCTGAAGCTGGTACTG....................2012.0021000001000
.................................................................................................................................................................................................................................................................................................................................................................CTGATTAGTCGATCGTTGAA...2012.0020000000020
......................................................................................................................GATTGGGATCGGGGATTGCGTT............................................................................................................................................................................................................................................2221.5030000000030
.................................................................................................................TTGCCGATTGGGATCGGGGATTGCGAAC...........................................................................................................................................................................................................................................2811.0010000000010
.............................................................................................................GACCTTGCCGATTGGGATC........................................................................................................................................................................................................................................................1911.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................AGCTGGTACTGATTAGTCGAT..........2111.0010000001000
.............................................................................................................GACCTTGCCGATTGGGATCGGA.....................................................................................................................................................................................................................................................2211.0010000001000
....................................................................TGTGCGGCA----------------------ATG-CAACTGG..........................................................................................................................................................................................................................................................................1911.0010100000000
...........................................................................................................................GGATCGGGGATTGCGAAC...........................................................................................................................................................................................................................................1811.0010000000010
..................................................................................................................TGCCGATTGGGATCGGGGATTGCGAACGG.........................................................................................................................................................................................................................................2911.0010000000010
...........................................................................................................TGGACCTTGCCGATTGGGATCG.......................................................................................................................................................................................................................................................2211.0010000001000
.........................................................................................................ACTGGACCTTGCCGATTGGGATCGG......................................................................................................................................................................................................................................................2511.0010100000000
........................................................................................................................................................................................................................................................................................................................................................AAGCTGGTACTGATTAGTCGT...........2111.0010000000010
.......................................................................................................................................................................................................................................................................................................................................TGGCTCGGAAAGGTCTGAAGC............................2111.0011000000000
...........................CA-------------------------TCATTTGAGCCTTTTGTG................................................................................................................................................................................................................................................................................................................2011.0010100000000
................................................................................................................................GGGGATTGCGAACGGCTTC.....................................................................................................................................................................................................................................1911.0010000000010
............................................................................................................GGACCTTGCCGATTGGGAT.........................................................................................................................................................................................................................................................1911.0011000000000
...................................................................TTGTGCGGCA----------------------ATG-CAACTGGACC.......................................................................................................................................................................................................................................................................2311.0011000000000
..TTTCTTCCTCGCTATATTTT..................................................................................................................................................................................................................................................................................................................................................................2011.0010000000010
.............................................................................................................................ATCGGGGATTGCGAACGGCTT......................................................................................................................................................................................................................................2111.0010000000010
..............................................................................................................................................................................................................................................................................................................................................................GTACTGATTAGTCGATCGTTG.....2111.0010000000010
.......................................................................................................................ATTGGGATCGGGGATTGCGT.............................................................................................................................................................................................................................................2011.0010000000010
....................................................................TGTGCGGCA----------------------ATG-CAACTGGACCTTGC...................................................................................................................................................................................................................................................................2611.0010000000010
............................................................................A----------------------ATG-CAACTGGACCTTGCC..................................................................................................................................................................................................................................................................1911.0010100000000
.............................................................................................................................ATCGGGGATTGCGAACGGCT.......................................................................................................................................................................................................................................2011.0010000000010
................................................................CTTTTGTGCGGCA----------------------ATG-CAAC.............................................................................................................................................................................................................................................................................2011.0010000001000
...........................................................................................................................GGATCGGGGATTGCGAACGGC........................................................................................................................................................................................................................................2111.0010000000010
..TTTCTTCCTCGCTATATTTTT.................................................................................................................................................................................................................................................................................................................................................................2111.0010000000010
..............TATATTTTTCGTTCA-------------------------TCATTT............................................................................................................................................................................................................................................................................................................................2111.0010000000010
.....................................................................................................................CGATTGGGATCGGGGATTGT...............................................................................................................................................................................................................................................2011.0010000001000
....................................................................................................................CCGATTGGGATCGGGGATTGCGAACGGCT.......................................................................................................................................................................................................................................2911.0010000000010
........................................................................................................AACTGGACCTTGCCGATTGGGA..........................................................................................................................................................................................................................................................2211.0010000001000
...................................................................................................ATG-CAACTGGACCTTGCCGA................................................................................................................................................................................................................................................................2011.0010000000010
..................................................................TTTGTGCGGCA----------------------ATG-CAACTGGACCTTGCC..................................................................................................................................................................................................................................................................2911.0010100000000
....................................................................TGTGCGGCA----------------------ATG-CAACTGGAC........................................................................................................................................................................................................................................................................2111.0010000000010
.............................................................................................................................ATCGGGGATTGCGAACGGCTTT.....................................................................................................................................................................................................................................2211.0010000000010
....................................................................................................................CCGATTGGGATCGGGGATTGCG..............................................................................................................................................................................................................................................2211.0010000000010
..........................................................................................................................................................................................................................................................................................................................................................GCTGGTACTGATTAGTCGAT..........2011.0010100000000
TTTTTCTTCCTCGCTATAT.....................................................................................................................................................................................................................................................................................................................................................................1911.0010001000000
.....................................................................................................................................................................................................................................................................................................................................................CTGAAGCTGGTACTGATTAG...............2011.0010000000010
.......................................................................GCGGCA----------------------ATG-CAACTGGACCTTG....................................................................................................................................................................................................................................................................2211.0010000000010
............................................................................................................................................................................................................................................................................................................................................CGGAAAGGTCTGAAGCTGGT........................2011.0010000000010
.....CTTCCTCGCTATATTTTTCG...............................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.TTTTCTTCCTCGCTATATTT...................................................................................................................................................................................................................................................................................................................................................................2011.0010000000010
.............................................................................................................................ATCGGGGATTGCGAACGGCTTTT....................................................................................................................................................................................................................................2311.0010000000010
................................................................................................................................................................................................................................................................................................................................................................ACTGATTAGTCGATCGTTGAA...2111.0010000000010
........................................................................................................................................................................................................................................................................................................................................GGCTCGGAAAGGTCTGAAGC............................2011.0010100000000
..................................................................................................................TGCCGATTGGGATCGGGGATTC................................................................................................................................................................................................................................................2211.0010000001000
...............................................................................................................................CGGGGATTGCGAACGGCTT......................................................................................................................................................................................................................................1911.0010000000010
...................TTTTCGTTCA-------------------------TCATTTGAG.........................................................................................................................................................................................................................................................................................................................1911.0010000000010
.............................................................................................................GACCTTGCCGATTGGGATCGGG.....................................................................................................................................................................................................................................................2211.0010000001000
....................................................................................................................................ATTGCGAACGGCTTCCATGA................................................................................................................................................................................................................................2011.0010100000000
.............................................................................................................GACCTTGCCGATTGGGATCT.......................................................................................................................................................................................................................................................2011.0010100000000
..................TTTTTCGTTCA-------------------------TCATTTGA..........................................................................................................................................................................................................................................................................................................................1911.0010000000010
.........................................................................................................................TGGGATCGGGGATTGCGAA............................................................................................................................................................................................................................................1911.0010000000010
.............................................................................................................................ATCGGGGATTGCGAACGGCTTC.....................................................................................................................................................................................................................................2211.0010000000010
.....................................................................................................................CGATTGGGATCGGGGATTGCGA.............................................................................................................................................................................................................................................2211.0010000000010
...............ATATTTTTCGTTCA-------------------------TCATTTG...........................................................................................................................................................................................................................................................................................................................2111.0010000000010
...................................................................................................ATG-CAACTGGACCTTGCCG.................................................................................................................................................................................................................................................................1911.0010000010000
..........................................................................................................................GGGATCGGGGATTGCGAACGGC........................................................................................................................................................................................................................................2211.0010000000010
..............................................................................................................ACCTTGCCGATTGGGATCGGG.....................................................................................................................................................................................................................................................2111.0010000001000
.....................................................................................................................................TTGCGAACGGCTTCCATGA................................................................................................................................................................................................................................1911.0010000001000
.....................................................................................................................CGATTGGGATCGGGGATTGCGAACGG.........................................................................................................................................................................................................................................2611.0010000000010
........................................................................................................................TTGGGATCGGGGATTGCG..............................................................................................................................................................................................................................................1811.0010000000010
.........................................................................GGCA----------------------ATG-CAACTGGACCTTG....................................................................................................................................................................................................................................................................2011.0010100000000
.........................................................................................................................TGGGATCGGGGATTGCGAAC...........................................................................................................................................................................................................................................2011.0010000000010
........................................................................................................AACTGGACCTTGCCGATTGGGATCG.......................................................................................................................................................................................................................................................2511.0010000100000
.....................................................................................................................................TTGCGAACGGCTTCCATGACG..............................................................................................................................................................................................................................2111.0010000001000
............................................................................................................................GATCGGGGATTGCGAACGGC........................................................................................................................................................................................................................................2011.0010000000010
...................................................................................................................GCCGATTGGGATCGGGGATTGC...............................................................................................................................................................................................................................................2211.0010000001000
.....................................................................................................................CGATTGGGATCGGGGATTGCGAACGGC........................................................................................................................................................................................................................................2711.0010000000010
.................................................................................................................TTGCCGATTGGGATCGGGGA...................................................................................................................................................................................................................................................2011.0010000001000
.........................................................................................................................TGGGATCGGGGATTGCGA.............................................................................................................................................................................................................................................1811.0010100000000
...........................................................................................................TGGACCTTGCCGATTGGGATC........................................................................................................................................................................................................................................................2111.0010000001000
..........................................................................................................................GGGATCGGGGATTGCGAACG..........................................................................................................................................................................................................................................2011.0010100000000
............GCTATATTTTTCGTTCA-------------------------TCA...............................................................................................................................................................................................................................................................................................................................2011.0010000000010
...............................................................................................................................CGGGGATTGCGAACGGCTTCC....................................................................................................................................................................................................................................2111.0010000000010
......................................................................................................................GATTGGGATCGGGGATTGCGAACG..........................................................................................................................................................................................................................................2411.0010000000010
...................................................................................................ATG-CAACTGGACCTTGCCGATTG.............................................................................................................................................................................................................................................................2311.0010000100000
.....................................................................................................................................................................................................................................................................................................................................................................TTAGTCGATCGTTGAATAA1911.0010000000010
...................................................................................................ATG-CAACTGGACCTTGCCGAT...............................................................................................................................................................................................................................................................2111.0010000001000
......................................................................................................................................TGCGAACGGCTTCCATGACGA.............................................................................................................................................................................................................................2111.0010100000000
.............................................................................................................GACCTTGCCGATTGGGATTA.......................................................................................................................................................................................................................................................2020.5010000001000
.......................................................................................................................ATTGGGATCGGGGATTGT...............................................................................................................................................................................................................................................1820.5010000000010
.............................................................................................................GACCTTGCCGATTGGGATCTTT.....................................................................................................................................................................................................................................................2240.2510100000000
......................................................................................................................GATTGGGATCGGGGATTGCTTT............................................................................................................................................................................................................................................22100.1010000000010
......................................................................................................................GATTGGGATCGGGGATTGTTT.............................................................................................................................................................................................................................................21120.0810000000010
droWil2
TTTTTTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAA------------------------------TATTCATTTCTT--ATGTTTTGCAGTTGGCACGCCGTGGTCTAAAACTAGTGCTGATCAGTCGATCGCTGGATAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................................................................................................................................................................................................................................................................................................CTAGTGCTGATCAGTCGAT..........1913.00301110
.....................................................................................................................................................................................................................................................................................................................................................CTAAAACTAGTGCTGATCAGTCGAT..........2512.00200110
.......................................................................................................................................................................................................................................................................................................................................................AAAACTAGTGCTGATCAGTCGATCGCT......2712.00200110
.........................................................................................................................................................................................................................................................................................................................................................AACTAGTGCTGATCAGTCGAT..........2111.00100010
......................................................................................................................................................................................................................................................................................................................................................TAAAACTAGTGCTGATCAGTCGATCGCT......2811.00101000
......................................................................................................................................................................................................................................................................................................................................................TAAAACTAGTGCTGATCAGTCGATCGC.......2711.00101000
.........................................................................................................................................................................................................................................................................................................................................GCACGCCGTGGTCTAAAA.............................1811.00100010
.......................................................................................................................................................................................................................................................................................................................................................AAAACTAGTGCTGATCAGTCGAT..........2311.00100010
.............................................................................................................................................................................................................................................................................................................................................................AGTGCTGATCAGTCGATCGCT......2111.00100010
..................................................................................................................................................................................................................................................................................................................................................GGTCTAAAACTAGTGCTGATCAGTCGAT..........2811.00100010
.........................................................................................................................................................................................................................................................................................................................................................AACTAGTGCTGATCAGTCGA...........2011.00100100
................................................................................................................................................................................................................................................................................................................................................................GCTGATCAGTCGATCGCTGGA...2111.00100010
.....................................................................................................................................................................................................................................................................................................................................GTTGGCACGCCGTGGTCT.................................1811.00100010
.........................................................................................................................................................................................................................................................................................................................................GCACGCCGTGGTCTAAAACTAGT........................2311.00100010
droVir3
T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTA--AAACTTTGCAGTTGGCACGCAAAGGCCTGAAACTGGTTTTGATTAGTCGCTCGTTGGAAAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................TAGTCGCTCGTTGGAAAA1812.002020000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................CTGAAACTGGTTTTGATTAGTCGCTC.........2611.001000000000000000000000000000000100000000000000000000000000000000
droMoj3
TA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTCTAGTTGGCGCGCAAGGGACTGAAATTGGTATTGATTTCGCGATCCTTGGACAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................................................................................................................................................................................................................................................................................................................AAATTGGTATTGATTTCGCGATC.........2311.001000001
.......................................................................................................................................................................................................................................................................................................................................................GAAATTGGTATTGATTTCGCGATCCT.......2611.001100000
......................................................................................................................................................................................................................................................................................................................................TTGGCGCGCAAGGGACTGAAATTGG.........................2511.001100000
.....................................................................................................................................................................................................................................................................................................................................GTTGGCGCGCAAGGGACTG................................1911.001000001
.........................................................................................................................................................................................................................................................................................................................................................AATTGGTATTGATTTCGCGATCCTT......2511.001100000
droGri2
ATATTTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------------------AAATAACTTTATTATTTG-----------------------TCGT--GCAATTTGCAGTTGGCACGCAAAGGAATGAAACTGGTGTTGATTAGTCGCTCGTTGGAGAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
CTATTTTA---------------GGTTCAGAAAGGTCTTTTTAGGCTTTCACATTCATTTGAGACTATATTGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACTTTGTCC-CTTACCCTCAGCTGGCCCGCCGAGGACTGAAGCTGGTGCTGATCAGCCGATCGCTGGAGAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................................................................................................................................................................................................................................................................GCTGGCCCGCCGAGGACTGAAGC............................2311.001100000
........................................................................................................................................................................................................................................................................................................................................GGCCCGCCGAGGACTGAAGCTG..........................2211.001010000
...............................................................................................................................................................................................................................................................................................................................................CGAGGACTGAAGCTGGTGCTGATC.................2411.001100000
.................................................................................................................................................................................................................................................................................................................................................AGGACTGAAGCTGGTGCTGATCAGC..............2511.001010000
....................................................................ATTGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACTTTGTCC-CTTACCCTCAG..................................................2611.001100000
droBip1
CTTATAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTTTAAT------------------A-----------------------------AAATAACAATCATCTCCCTATTTTTCTAGCTGGCCAGCCGAGGACTGAAGCTGGTTCTGATCAGTCGTTCGCTGGACAASizeHit CountTotal NormTotal
No Reads
droKik1
TATTCCCA-------TTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA---------TAATT-----------AAAAATGATTCAGAAATATCAAAT------------------TA-------------ATTG-----------------------ATGT--GTCCTTTTCAGCTGGCTCGCCGGGGCCTGAAACTGGTGCTGATCAGTAGATCACTGGATAASizeHit CountTotal NormTotal
No Reads
droFic1
CTAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACCACATATAAAACTTTTAAT------------------T-------------------------T-TAAATACATTTTTATTT---AAAACTTTTAGTTGGCGCGTCGGGGACTGAAGTTGGTGCTGATCAGTAGGTCTTTGGAAAASizeHit CountTotal NormTotal
No Reads
droEle1
TTAAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--------------------------------------------------C-TAAATCAATATTTATTTA--CACGTTTTTAGCTGGCTCGCAGGGGCTTGAAGCTAGTGCTGATAAGTAGATCCCTGGAAAASizeHit CountTotal NormTotal
No Reads
droRho1
AAAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATT-----------CTCAACCT--------------------------------------------TTATGCTTGCTGTATTA-TAAATTAATATTTATTTA--ACTCATTTTAGCTGGCTCGCAGGGGACTGAAACTTGTGCTGATCAGTAGATCGTTGGAAAASizeHit CountTotal NormTotal
No Reads
droBia1
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCAGCTGGCTCGCAGGGGCCTGAAACTGGTGCTGATCAGCAGATCCCTGGAAAASizeHit CountTotal NormTotal
No Reads
droTak1
TATTTTTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACTAAAGAAGCA-----------TTAGA------------------TAATAAGTATATATTTAAAGAAT---------------------ATT-GTAATAACATCTATGTA--ACCCATTTTAGCTGGCTCGCCGGGGCCTGAAACTGGTGCTGATCAGTAGATCCCTGGATAASizeHit CountTotal NormTotal
No Reads
droEug1
AAAATAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAA--------------------------------TAAATGTTAAAATTTTTCCTTAGTTGGCTCGCAGAGGACTGAAACTAGTGCTAATCAGTAGATCCCTGGAAAASizeHit CountTotal NormTotal
No Reads
dm3
A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAATATTTA--ATCACTTTCAGTTGGCTCGCAGGGGCTTGAAACTGGTGCTGATTAGTAGATCCCTGGAGAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................ACTGGTGCTGATTAGTAGATCCCTGGA...2713.0030000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................AGGGGCTTGAAACTGGTGCTGATT.................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................AGGGGCTTGAAACTGGTGCT.....................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................TGCTGATTAGTAGATCCCTGGAGAA2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................TGGTGCTGATTAGTAGATCCCTGGA...2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................TCGCAGGGGCTTGAAACTGGTGCT.....................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................AGGGGCTTGAAACTGGTGCTGAT..................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................GAAACTGGTGCTGATTAGTAGATCCC.......2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................GTTGGCTCGCAGGGGCTTGA...............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................TTGGCTCGCAGGGGCTTGAAACTGGT........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................................................................................................................TGGTGCTGATTAGTAGATCCCTGGAG..2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................TGAAACTGGTGCTGATTAGTA.............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................TGGTGCTGATTAGTAGATCCC.......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................GTGCTGATTAGTAGATCC........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................CTGGTGCTGATTAGTAGATCCCTGG....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................CTGATTAGTAGATCCCTGGA...2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................CTGGTGCTGATTAGTAGATCCCTGGAGA.2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................TGAAACTGGTGCTGATTAGTAGA...........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................TGAAACTGGTGCTGATTAGT..............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................GGTGCTGATTAGTAGATCCCTGG....2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TGGCTCGCAGGGGCTTGAAACTGGT........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................ATCACTTTCAGTTGGCTCGCAGGG.....................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TGGCTCGCAGGGGCTTGAAACTGG.........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................TGGTGCTGATTAGTAGATCCCTGGAGA.2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................TGGTGCTGATTAGTAGATCCCTGGAGAA2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................TGGTGCTGATTAGTAGATCCCT......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................CTTGAAACTGGTGCTGATTAGT..............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................GCTCGCAGGGGCTTGAAAC............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................GGGGCTTGAAACTGGTGCT.....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................TGAAACTGGTGCTGATTAGTAGATCCC.......2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................TGATTAGTAGATCCCTGGAGA.2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................GGCTTGAAACTGGTGCTGATTAGTAGA...........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................TTGAAACTGGTGCTGATTAGTAGATC.........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................GGCTTGAAACTGGTGCTGATTA................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................GCTTGAAACTGGTGCTGATTAGTAGA...........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TCACTTTCAGTTGGCTCGCAGGGGC...................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................GCTGATTAGTAGATCCCTGGC...2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................GAAACTGGTGCTGATTAGTAGATC.........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................TTGAAACTGGTGCTGATTAGTAGATCT........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................ACTGGTGCTGATTAGTAGATCCC.......2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................CTTGAAACTGGTGCTGATT.................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................GATTAGTAGATCCCTGGAGA.2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................TCGCAGGGGCTTGAAACTGGTGCTGAAA.................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................GCTTGAAACTGGTGCTGATTAGT..............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TGGCTCGCAGGGGCTTGAAACTGGTGC......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................GCTGATTAGTAGATCCCTGGA...2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAATATTTA--ATTACTTTCAGCTGGCTCGCAGGGGCTTAAAGCTGGTGCTGATTAGTAGATCCCTGGAGAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................................................................................................................................................................................................................................................................................................................TGGCTCGCAGGGGCTTAAAGCT...........................2211.00100000000001000000
..............................................................................................................................................................................................................................................................................................................................................................GTGCTGATTAGTAGA...........1511.00100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................TTAAAGCTGGTGCTGATTAGTAGATCC........2711.00100000000001000000
.......................................................................................................................................................................................................................................................................................................................................TGGCTCGCAGGGGCTTAAAGCTGG.........................2411.00100000000001000000
droSec2
ATTTCCTA----------------------------------------------------------------TCCAAAAGTACGTAGATATGGGCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCTAATAAATATTTA--ATCACTTTCAGCTGGCTCGCAGGGGCTTGAAGCTGGTGCTGATTAGTAGATCCCTGGAGAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
TTTTTCTTCGCCCCATTTTATTTTATCTC-------------------------TTATCTAGGAATTTACTATCCAAAAGTACGTAAATATGAGCAGCCCTG-TAT------------------------------------------------------AATTTTCAGTCA----AACTATACC------------ACAATTTGTAGAAAACTTAAGTAATAGTTA--------ATTCAATACA--------------------------------TTAAGCATTCTGAATATG-TTATTAATAAATATTTA--ATCAATTGCAGCTGGCGCGCAGGGGCCTGAAGCTGGTGCTGATTAGTAGATCCCTGGAAAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................CTGGTGCTGATTAGTAGATCCCTGT....2511.00101000000000
.................................................................................ACGTAAATATGAGCAGCCCT...................................................................................................................................................................................................................................................................................2011.00100100000000
...........................................................................................................................................................................................................................................................................................................................................GCGCAGGGGCCTGAAGCTGGT........................2111.00100000010000
droEre2
TTTTTCTTCGCTCCATTGCTTTTTATCTC-------------------------TTATCTAAGAATTTACTTTCCAAAAGTACGTAAATATGAGCAGGACGGTTAT------------------------------------------------------AATTTTTAAACG----AACTATACCTTGTATGATACAACATTTGGCAGAAGACTTAAATAACAGTTAGAACATTTATACAATACA--------------------------------ACACAGCTTCTGAGTATGTAAGTTAATAAACATTTA--ATCACTTTCAGCTGGCTCGCAGGGGCCTGAAGCTGGTGCTGATTAGTAGATCCCTGGAAAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................................................................................................................................................................................................................................................................................................................................................................GCTGATTAGTAGATCCCTG.....1911.0010000010
..............................................................................................................................................................................................................................................................................................................................................CAGGGGCCTGAAGCTGGTGCTG....................2211.0011000000
..................................................................................................................................................................................................................................................................................................................................................GGCCTGAAGCTGGTGCTGATT.................2111.0010100000
...................................................................................................................................................................................................................................................................................................................................................GCCTGAAGCTGGTGCTGATTAGTA.............2411.0010100000

Generated: 06/08/2015 at 04:11 PM