ID:

dpe_1421

 Coordinate:

scaffold_3:7282618-7282914 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.7 -11.4 -11.4

Flybase annnotation

CDS [Dper\GL22348-cds]; exon [dper_GLEANR_4423:4]; exon [dper_GLEANR_4423:3]; CDS [Dper\GL22348-cds]; intron [Dper\GL22348-in]

Repeatable elements

NameClassFamilyStrand
(TCG)nSimple_repeatSimple_repeat+

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TCCTCTACAATGCCATACAGGTTGTTTTCAGCGCGTGGCTGTTCTACGAGGTAGGTACTCGACCACCCATCACCCACACCCCATAACATTCCCAATAGCCTCATGCCACATTCTCATCGTCATCGTCGTCGTCGTTGTCGTCGCTGTCGCACCGTAAACTGGAGCCTGGAGCCCGGAGCCTGGAGCCTGGAACTGGAGGAAAACCTATGAAGCGGATAAATGGAGAAACGGAAAAATGCTTGGCGCTTGACTTGATTTGATTTGATCCTGATTTGGCTTACTTTATGACATTTTCTGTTCTGTTCTGTTTCCTTTCCTTTCTTTTGCAAATGATTTCTTTGTTCTAGTGCTTAATGGGCGGCTGGTGGGGCGCGTACAGCTTCCGCTGCCAGCCGGT
***********************************************************************************************************************************************************************************....((((.......(((((....)).......(((((((((.(((.((((.............)).))..))).)))).))))).)))......))))*********************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M021
embryo
 M042
female body
 V057
head
...................................................................................................................................................................................................................................................................ATTTGATCCTGATTTGGCT....................................................................................................................... 19 0 1 2.00 2 2 0 0
.....................................................................................................................................................................................................................................................................................TTACTTTATGACATTTTCTGTTCTGTTC............................................................................................ 28 0 1 2.00 2 2 0 0
................................................................................................................................................................................................................................................................................................................................................................AATGGGCGGCTGGTGGTG........................... 18 1 1 1.00 1 0 0 1
..........................................................................................................................................CGTCGCTGTCGCACCGTAAACTGGAGCCG...................................................................................................................................................................................................................................... 29 1 1 1.00 1 1 0 0
...................................................................................................................................................................................CTGGAGCCTGGAACTGGAGGA..................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0
.............................AGCGCGTGGCTGTTCTACGA............................................................................................................................................................................................................................................................................................................................................................ 20 0 1 1.00 1 0 1 0
..............................................................................................................................................................................................................................................................................................................................................................TTAAGGGGCGGGTAGTGGGGC.......................... 21 3 2 0.50 1 0 0 1
................................................................................................................................................................................................................................................................................................................................................................AATGGGCGGCTGGGGGGGGGCT....................... 22 3 6 0.17 1 0 0 1
..........................................................................................................................................................................................................................................................................................................................................................GGGCATAATGGTCGGCTGGT............................... 20 3 8 0.13 1 0 0 1
.......................................................................................................................................................................................................................................................................................................................................................................GGCTGGTGGGGAGCGCAAA................... 19 3 20 0.05 1 0 0 1

Anti-sense strand reads

AGGAGATGTTACGGTATGTCCAACAAAAGTCGCGCACCGACAAGATGCTCCATCCATGAGCTGGTGGGTAGTGGGTGTGGGGTATTGTAAGGGTTATCGGAGTACGGTGTAAGAGTAGCAGTAGCAGCAGCAGCAACAGCAGCGACAGCGTGGCATTTGACCTCGGACCTCGGGCCTCGGACCTCGGACCTTGACCTCCTTTTGGATACTTCGCCTATTTACCTCTTTGCCTTTTTACGAACCGCGAACTGAACTAAACTAAACTAGGACTAAACCGAATGAAATACTGTAAAAGACAAGACAAGACAAAGGAAAGGAAAGAAAACGTTTACTAAAGAAACAAGATCACGAATTACCCGCCGACCACCCCGCGCATGTCGAAGGCGACGGTCGGCCA
***********************************************************************************************************************....((((.......(((((....)).......(((((((((.(((.((((.............)).))..))).)))).))))).)))......))))*********************************************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V050
head
 V057
head
 V111
male body		 M042
female body
 M021
embryo
 V042
embryo
..................................................................AGTAGTGAGTGTGAGGTATTGTA.................................................................................................................................................................................................................................................................................................................... 23 3 1 2.00 2 0 0 1 1 0 0
.......................................................................CGGGTCTGGGGTAATGTAAGGG................................................................................................................................................................................................................................................................................................................ 22 3 1 1.00 1 1 0 0 0 0 0
........................................................................GGGTCTGGGGTAATGTAAGGG................................................................................................................................................................................................................................................................................................................ 21 2 1 1.00 1 1 0 0 0 0 0
.....................ACCAAAAGTCGCGCACCGAGT................................................................................................................................................................................................................................................................................................................................................................... 21 3 2 0.50 1 0 1 0 0 0 0
.................................................................GAGTAGTGAGTGTGAGGTATTG...................................................................................................................................................................................................................................................................................................................... 22 3 2 0.50 1 0 0 1 0 0 0
.........................................................................GGTATGGGGTATTGTAAGGT................................................................................................................................................................................................................................................................................................................ 20 2 3 0.33 1 0 1 0 0 0 0
.............................................................TGGTGGGTTGTGGGTTTGGGGT.......................................................................................................................................................................................................................................................................................................................... 22 2 3 0.33 1 0 0 0 1 0 0
..............................................................................................................AAAAGTAGCAGTAGCAGCAGCAGC....................................................................................................................................................................................................................................................................... 24 1 4 0.25 1 0 0 0 0 1 0
...............................................................................................................AAAGTAGCAGTAGCAGCAGC.......................................................................................................................................................................................................................................................................... 20 1 8 0.25 2 0 0 0 0 2 0
................................................................TGGCGAGTGGGTGTCGGGTAT........................................................................................................................................................................................................................................................................................................................ 21 3 4 0.25 1 0 1 0 0 0 0
........................................................................CGGTATGGGGTAATGTAAGGG................................................................................................................................................................................................................................................................................................................ 21 3 5 0.20 1 0 1 0 0 0 0
...................................................................GTAGTGAGTGTGAGGTAT........................................................................................................................................................................................................................................................................................................................ 18 2 7 0.14 1 0 1 0 0 0 0
........................................................................GGGTCTGGGGAAATGTAAGGG................................................................................................................................................................................................................................................................................................................ 21 3 8 0.13 1 0 1 0 0 0 0
........................................................................GGGTATGGGGTAATGTAAGGT................................................................................................................................................................................................................................................................................................................ 21 3 8 0.13 1 0 1 0 0 0 0
............................................................................GTGGGGTACTGGAAGGGT............................................................................................................................................................................................................................................................................................................... 18 2 8 0.13 1 0 1 0 0 0 0
........................................................................GGGTGTGGAGAAATGTAAGGG................................................................................................................................................................................................................................................................................................................ 21 3 10 0.10 1 0 1 0 0 0 0
........................................................................GGGTATGGGCTACTGTAAGGG................................................................................................................................................................................................................................................................................................................ 21 3 10 0.10 1 1 0 0 0 0 0
..........................................................................................................................................GCAGCGACAAAGTGGCAGTT............................................................................................................................................................................................................................................... 20 3 14 0.07 1 0 1 0 0 0 0
.......................................................ATGAGCTAGTGGGCAGCGG................................................................................................................................................................................................................................................................................................................................... 19 3 17 0.06 1 0 0 0 0 0 1
............................................................................................................................................................................................................................................................................TCTAAACGGAATGTAATACT............................................................................................................. 20 3 18 0.06 1 0 1 0 0 0 0
...........................................................................................................TGTAAGAGTAGCAGGAGACG.............................................................................................................................................................................................................................................................................. 20 3 20 0.05 1 0 0 0 0 1 0
.........................................................................................................GGTGTACGAGAAGCAGTA.................................................................................................................................................................................................................................................................................. 18 2 20 0.05 1 0 0 0 1 0 0
.......................................................................CGGCTGTGGGGTATTCTA.................................................................................................................................................................................................................................................................................................................... 18 3 20 0.05 1 0 1 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................AGGAAAGGAAAGAAAATGTA.................................................................... 20 2 20 0.05 1 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_3:7282568-7282964 + dpe_1421 TCCTCTACAATGCCATACAGGTTGTTTTCAGCGCGTGGCTGTTCTACGAGGTAGGTACTC---GA----CCACC-----------------------CAT----------------------------------------------C-----------------AC-----------CCAC-AC-----C-CCATAACATTCCCAATAGC-----------CTCATGCCACATTCTCATCGT----CATCGTCGT---------CGTCGTTGTCGTCGCTG--TCGCACCGTAAACTGGAGCC--------------------------------------------------------------TGGAGCCCGGAGC--CTGGAGCCTGGAACTGGAGGAAAACCTATGAAGCGGAT-AAATGGAGAAA---CGGAAAAATGC-------------------------------------------T----------TGGCGC-----TTGACTTGATTTGATTTGATCCT--GA-------------TT-TGG---C-TTACTTTATGACATTTTC-TGTTCTGTTCTGTTTCCT----------------------------------------------------------------TTCC-TTTCTTTTGCAAATGAT--TT--CTTT-GTTCTAGTGCTTAATGGGCGGCTGGTGGGGCGCGTACAGCTTCCGCTGCCAGCCGGT
dp5 2:24501282-24501699 + TCCTCTACAATGCCATACAGGTTGTTTTCAGCGCGTGGCTGTTCTACGAGGTAGGTACTC---GA----CCACC-----------------------CAT----------------------------------------------C-----------------AC-----------CCAT-CC-----C-CCATAACATTCCCAACAGC-----------CTCATGCCACATTCTCATCGT----------CGT---CGTCGTCGTCGTTGTCGTCGCTG--TCGCACCGTAAACTGGAGCCTGGA----GC-----CTGGA-GCCCGG-----------------------------AGC--CTGGAGCCCGGAGC--CTGGAGCCTGGAACTGGAGGAAAACCTATGAAGCGGAT-AAATGGAGAAA---TGGGAAAACGC-------------------------------------------T----------TGGCGC-----TTGACTTGATTTGATTTGATCCT--GA-------------TT-TGG---C-TTACTTTATGACATTTTC-TGTTCTGTTCTGTTTCCT----------------------------------------------------------------TTCC-TTTCTTTTGCAAATGAT--TT--CTTT-GTTCTAGTGCTTAATGGGCGGCTGGTGGGGCGCGTACAGCTTCCGCTGCCAGCCGGT
droWil2 scf2_1100000004943:2936834-2937131 + dwi_3225 TCGTCTACAATGCCCTACAGGTGGTATTTAGCGCGTGGCTCTTCTATGAGGTAGGTAGTT---CAA--A---GATAATC------------------CTT----TTTTC--------------------------------CCCACCAACAT------------------------C-AACA-----TCA-TCA-TC-A-CGA----------------------------------------TCGCATCGCGTCTGTTAGTGTTGTCATCGTCGT---CAGAGG------------------------AA-GCCGAGATGGA-A---A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGAAGATA-------------------ACTG--AA-------------CA-------T-TTAATTTATG----ATTTC-CATTTGTTTT-TCTGTTA---------------------------------------------------------------TTTC--TTGATTTGCAATTAACTTTTGATTTA-ATTTTAGTGTTTAATGGGCGGCTGGTGGGGCGCATACAGCTTCCGCTGCCAGCCGGT
droVir3 scaffold_13047:9357333-9357810 + dvi_16145 TCGTCTATAATGCGTTACAGGTTGTATTTAGCGCGTGGCTATTCTATGAGGTAAGTGGCACTCACA--C---CAAACCAAATAACACGACCATCAACAT-C---AACA-ACAATAAGAACAACAACAACAAGAACAAC---ACCAACCACAA------------------------C-ATCAAT---CAA-CAA-CA-A-CAACAACAAC-----------A-------------ACATCGC-TGGCGTCGTCGT---------------TTTGGCTGCTT----G----CTTAACTG-------------AC-----CTGGAAA---AGCGTTTAAAG-GCA-------------AACAAC--TTGCTGCTGGGAAC--TGCCAACTGCCAACTGCC---------------------AACTGC-----CAACTCCCAACTGCTACTGCCAACTGCTACTGCCAATAGGCAACTGCCTTAAGGCAATTGGCAATTGCTGCTG------------------------CTTTT--AA-------------TG-TGCAC-T-TTATTTTATG----TTTTT-CTTATGTTCTCTCTATC----------------------------------------------------------------TCAT--TTTCTTTGGCATTAAT--CTGATTTCGTTTTTAGTGTTTAATGGGCGGCTGGTGGGGTTCGTACAGCTTCCGCTGTCAGCCTGT
droMoj3 scaffold_6540:31282678-31283078 - TCATGTACAATGCGTTACAGGTTGTATTTAGTGCGTGGCTCTTCTATGAGGTAAGTGTC----GA----TTACAAGCAT--------------G---AACGCATG------------------------------------AACAAAC----------------ACAT-----CAT-CATC-AA---CAA-CAA-CA-A-CCACAACAAC-----------T-------------TTATGGC-TGGCGTCGTCGT------------CGTTTTGGCTGCTT----G----CTTAACTG-------------GC-----CCGCA-A---AGCGTTTAAATGACA-------------ATCAGC--TTGCAACGTGCAAC--GTGCAACTGGCAACTGGC---------------------AACTGA-----CAACAGGCAAATGTTACTG----CTGCTGCTGC--------------------------------TGCTGGCG------------------------CTTTT--AA-------------TG-TGCAC-T-TTATTTTATG----TTTTT-CTTACGTTCTCTCTATT----------------------------------------------------------------TCATTTTTCTTTTGGCATTAAT--CTGATTTTGTTTTTAGTGTTTAATGGGCGGCTGGTGGGGTTCGTACAGCTTCCGCTGTCAGCCAGT
droGri2 scaffold_14906:3897191-3897693 - dgr_195 TCAGCTATAATGCGTTACAGGTTGTATTTAGCGCGTGGCTTTTCTATGAGGTATGTAATA---CACAA-CCAAC-----------------------ATTT---AACACACCACAAGAACAACAACAACAACAACCACAACCACAACCAAAA------------AC---CCATT----ATCAACCACCAA-CAA-CA-A-CAACAACAAA-----------A-----------ACTCAACGC-TGGCGTCGTCGT---------------TTTGGCTGCTT----G----C--AACTG-------------AC-----CTGGA-A---AGCGTTCCGAG-ACA-------------A-CAACAAATGCAACA-ACAACAAATGCAACA-AC----AAC---------------------AAATGCAACAACAAC----AAC----AATAACAACTGCT---GCCAACAACCAACT---------------------G-CGATG------------------------CTTTT--AA-------------TG-TGCAC-T-CTTTTTTATG----TTTTTTCATATGTTCTCTCTCTTATTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGCTTTGTCTAATTATCTATATAAT--TTTCTTTGCAATTAAT--TTAATTTTGTTTTTAGTGTTTAATGGGCGGCTGGTGGGGTTCGTACAGCTTCCGCTGTCAGCCCGT
droAna3 scaffold_13340:15701428-15701739 + TCATGTACAATGCCATACAGGTTGTATTCAGCGCGTGGCTGTTCTACGAGGTAAGTAACT---CAG---CTCCG-----------------------AAT----------------------------------------------A--------------------------------GGTCT----T--CCC-AC-A-TG---GCAGC-----------TCCA--------TCTCATCGCGTGGCATCGTCGT------------------------CGCTG-ATTTCG---ACAGGACT-------CA-CCAGTG-----A-------------AC-TTC---ACCCCTCCGTC-G--------------------------------------------------------GACCCCC------------------------------------------------------------------------TGGAGAACACACACA-------------------TCTT--AA-------------TA-TATAT-T-TTTTTTTACG----CTTTT-GTT-TATCCTCACTCAC----------------------------------------------------------------CAGT--GCATTTTGCAACTAAT--GT--CTCT-GTTCTAGTGCTTGATGGGCGGCTGGTGGGGCTCGTACAGCTTCCGGTGCCAGCCGGT
droBip1 scf7180000396708:4335963-4336038 - T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGCCACTAAT--GT--CTCT-GTTCTAGTGCTTGATGGGCGGCTGGTGGGGCTCGTACAGCTTCCGGTGCCAGCCGGT
droKik1 scf7180000302475:416136-416452 + TCATGTACAATGCCATACAGGTTGTATTCAGCGCGTGGCTCTTCTACGAGGTAGGTACTC---CCCG-T---CCCTT---------------------------------------------------------------------CCCCATCC----------CCAT----------CCCACA----TT-CCA--C-A-TCCCAGCAGCAGCAGGTTCACC-----------CTTCATCGCGTGGCATCGTCGC------------------------TG--ACATTTGGATAACCGGACTCTCGAAGGA-ACCGTG-----G-------------AG-ACG-------------A-G--------------------------------------------------------GAC-ACA------------------------------------------------------------------------TC---GATG------------------------CTCCTCTGAGACCCAATTAATCCAATA---AC-TT-------AC-----------CCTG-----CTC--------------------------------------------------------------------GA--ATTATTTTGCAACTAAT--GT--CTCT-GTTCTAGTGCTTGATGGGCGGCTGGTGGGGCTCGTACAGCTTCCGGTGCCAGCCGGT
droFic1 scf7180000454096:1408011-1408115 - TCTTGTACAATGCCATACAGGTTGTATTCAGCGCGTGGCTCTTCTACGAGGTAAGTTCCC---C-G--TCCCCC-----------------------CAT----------------------------------------------C-----------------CCCT-----CC---CCCACT---CCC-CCA--C---TTCCAGCAGC-----------TCCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491104:2030867-2031168 - TCATGTACAATGCCATACAGGTTGTATTCAGCGCGTGGCTCTTTTACGAGGTAGGTACTC---CC---T---CCCATC-------------------CC---------------------------------------------TCC-------------------------------CCCTCT----TC-CCAAAAAATTCCCCGCAGC-----------TTCA---------TTCATCGCATGGCATCGTCAT------CGTCATCGTCATCGTCGCTGGACC------------------------GA-TCCGTG-----G-------------AC-TTGTACA-----CTGGT-G--------------------------------------------------------GAC-CCG------------------------------------------------------------------------TGGAGGATG------------------------CTCCT--TA-------------CGTTA---AC-TTACGTTATAA-----------TCTG-----TTT--------------------------------------------------------------------G---TTTTTTTTGCAACTAAT--GT--CTCT-GTTCTAGTGCTTGATGGGCGGCTGGTGGGGCTCGTACAGCTTCCGGTGCCAGCCGGT
droRho1 scf7180000777921:24926-25198 + TCATGTACAATGCCATACAGGTTGTATTCAGCGCGTGGCTCTTTTACGAGGTAGGTATTC---CCG--T---CCCAC---------------------------------------------------------------------C-----------------CC-----------GCAC-TC---TCC-CCA-AA-ATCCCCAGCAGC-----------TTCG---------TTCATCGCATGGCATCGTCGC------------------------TGGACC------------------------GC-TCCGTG-----G-------------AC-TTGTGGA-----CTTGT-G--------------------------------------------------------AAC-TCG------------------------------------------------------------------------CGGAGGATG------------------------CCTCT--TA-------------CTTTC---ACGTT--GTTATAA-----------TCTG-----------------------------------------------------------------------------------TTTTTGCTACTAAT--GT--CTCT-GTTCTAGTGCTTGATGGGCGGCTGGTGGGGCTCGTACAGCTTCCGGTGCCAGCCGGT
droBia1 scf7180000302098:160684-160942 + TCATGTACAATGCCATACAAGTTGTGTTCAGCGCGTGGCTCTTCTACGAGGTAGGTTGTC---CAC--T---CCCATCC------------------CA----------------------------------------------TT-------------------------------CCC-TT---TCC-CCA--C-A-TCCCAGCAGC-----------T-CA---------TTCATCGCGTGGCATCGTCGC------------------------TGGACT------------------------GA-CCCGTG-----A-------------AC-ACG-------------C-G--------------------------------------------------------GAC-CCG------------------------------------------------------------------------TGGAGGATG------------------------CTTTA--TG-------------CTCTA---AT-TT-------AA-----------CCTG----------------------------------------------------------------------------------TTTTTTGCCACTAAT--GT--CTCT-GTTCTAGTGCTTGATGGGCGGCTGGTGGGGCTCGTACAGCTTCCGGTGCCAGCCGGT
droTak1 scf7180000415291:18690-18819 + TCATGTACAATGCCATACAGGTTGTATTCAGCGCGTGGCTCTTCTACGAGGTAGGTACTC---CAA--T---CCCATCC------------------CA----------------------------------------------CC-----------------CCAT----------CCCTCT----TCCCCA--C-A-TCCCAGCAGC-----------TTCA---------TTCACCGCGTGGCATCGTCGC------------------------TG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409759:214857-214985 - TCATGTACAATGCCATACAGGTTGTTTTCAGCGCGTGGCTCTTTTACGAGGTAGGTATTC---CAA--A---CCCAACC------------------CA----------------------------------------------TCCATAT---------------------------CCTCT----T--CCA-AC-A-TTCTAGCAGA-----------CTCA---------TTTAACGCATGGCATCGTCGC------------------------TG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr3R:272055-272196 - TCATGTACAATGCCATACAGGTTGTATTTAGCGCATGGCTGTTTTATGAGGTAGGTATTC---CCGAA-CCACC-----------------------CATCCATCCCAT--------------------------------CCCACC-----------------CCGC----------CCCACT---TCC-CCA-TC-A-TCCCAGCAGC-----------T-----------TTTCATCGCGTGGCATCGTCGC------------------------TG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 3r:239591-239740 - TCATGTACAATGCCATACAGGTTGTATTTAGCGCATGGCTGTTTTATGAGGTAGGTATTC---CCGAA-CCACC-----------------------CAT----CCCAT--------------------------------CCCACCCACAC--NNNNNNNNNN------------C-ACCACT---TCC-CCA-TC-A-TCCCAGCAGC-----------T-----------CTTCATCGCGTGGCATCGTCGC------------------------TG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_6:377550-377700 - TCATGTACAATGCCATACAGGTTGTATTTAGCGCATGGCTGTTTTATGAGGTAGGTATTC---CCGAA-CCACC-----------------------CAT----CCCAT--------------------------------CCCACCCACACCC----------CCACCC---CACC-ACCACT---TCC-CCA-TC-A-TCCCAGCAGC-----------T-----------CTTCATCGCGTGGCATCGTCGC------------------------TG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 3R:648932-649062 - TCATGTACAATGCCATACAGGTTGTTTTTAGCGCATGGCTGTTTTATGAGGTAGGTATTC---CCG--T---CCCA-CC------------------CAT----------------------------------------------C-----------------AGAT-----CTC-GCCC-TT---GTC-CCA-TC-A-TCCCAGCAAC-----------T-----------TATTATCGCGTGGCATCGTCGC------------------------TG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4770:619018-619148 - TCATGTACAATGCCATACAGGTTGTATTTAGCGCATGGCTGTTTTATGAGGTAGGTATTC---CCA--T---CCCATCC------------------CA----------------------------------------------TC-----------------CCAT-----CCC-G-CC-TT---TTC-CCA-TC-A-TCCCAGCAAC-----------T-----------TATCATCACGTGGCATCGTCGC------------------------TG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
TCCTCTACAATGCCATACAGGTTGTTTTCAGCGCGTGGCTGTTCTACGAGGTAGGTACTC---GA----CCACC-----------------------CAT----------------------------------------------C-----------------AC-----------CCAC-AC-----C-CCATAACATTCCCAATAGC-----------CTCATGCCACATTCTCATCGT----CATCGTCGT---------CGTCGTTGTCGTCGCTG--TCGCACCGTAAACTGGAGCC--------------------------------------------------------------TGGAGCCCGGAGC--CTGGAGCCTGGAACTGGAGGAAAACCTATGAAGCGGAT-AAATGGAGAAA---CGGAAAAATGC-------------------------------------------T----------TGGCGC-----TTGACTTGATTTGATTTGATCCT--GA-------------TT-TGG---C-TTACTTTATGACATTTTC-TGTTCTGTTCTGTTTCCT----------------------------------------------------------------TTCC-TTTCTTTTGCAAATGAT--TT--CTTT-GTTCTAGTGCTTAATGGGCGGCTGGTGGGGCGCGTACAGCTTCCGCTGCCAGCCGGTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGATCCT--GA-------------TT-TGG---C-T..............................................................................................................................................................................................1912.002200000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACTTTATGACATTTTC-TGTTCTGTTC..................................................................................................................................................................2812.002200000
.................................................................................................................................................................................................................................................................................CGTCGCTG--TCGCACCGTAAACTGGAGCC--------------------------------------------------------------G.................................................................................................................................................................................................................................................................................................................................................................................................2911.001100000
............................................................................................................................................................................................................................................................................................................................................................................................CTGGAGCCTGGAACTGGAGGA..............................................................................................................................................................................................................................................................................................................................................................2111.001010000
.............................AGCGCGTGGCTGTTCTACGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
dp5
TCCTCTACAATGCCATACAGGTTGTTTTCAGCGCGTGGCTGTTCTACGAGGTAGGTACTC---GA----CCACC-----------------------CAT----------------------------------------------C-----------------AC-----------CCAT-CC-----C-CCATAACATTCCCAACAGC-----------CTCATGCCACATTCTCATCGT----------CGT---CGTCGTCGTCGTTGTCGTCGCTG--TCGCACCGTAAACTGGAGCCTGGA----GC-----CTGGA-GCCCGG-----------------------------AGC--CTGGAGCCCGGAGC--CTGGAGCCTGGAACTGGAGGAAAACCTATGAAGCGGAT-AAATGGAGAAA---TGGGAAAACGC-------------------------------------------T----------TGGCGC-----TTGACTTGATTTGATTTGATCCT--GA-------------TT-TGG---C-TTACTTTATGACATTTTC-TGTTCTGTTCTGTTTCCT----------------------------------------------------------------TTCC-TTTCTTTTGCAAATGAT--TT--CTTT-GTTCTAGTGCTTAATGGGCGGCTGGTGGGGCGCGTACAGCTTCCGCTGCCAGCCGGTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................TACTC---GA----CCACC-----------------------CAT----------------------------------------------C-----------------AC-----------CCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGCGGCTGGTGGGGCG.........................1911.0010000001000
................ACAGGTTGTTTTCAGCGCGTGGCTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100000
.......................GTTTTCAGCGCGTGGCTGTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.........ATGCCATACAGGTTGTTTTCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC-TGTTCTGTTCTGTTTCCT----------------------------------------------------------------..........................................................................................2020.5010100000000
droWil2
TCGTCTACAATGCCCTACAGGTGGTATTTAGCGCGTGGCTCTTCTATGAGGTAGGTAGTT---CAA--A---GATAATC------------------CTT----TTTTC--------------------------------CCCACCAACAT------------------------C-AACA-----TCA-TCA-TC-A-CGA----------------------------------------TCGCATCGCGTCTGTTAGTGTTGTCATCGTCGT---CAGAGG------------------------AA-GCCGAGATGGA-A---A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGAAGATA-------------------ACTG--AA-------------CA-------T-TTAATTTATG----ATTTC-CATTTGTTTT-TCTGTTA---------------------------------------------------------------TTTC--TTGATTTGCAATTAACTTTTGATTTA-ATTTTAGTGTTTAATGGGCGGCTGGTGGGGCGCATACAGCTTCCGCTGCCAGCCGGTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................................................................................................................................................................................................................................................................................................................A---A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGAAGATA-------------------ACTG--AA-------------CA-------.................................................................................................................................................................................................1911.00100100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTTAATGGGCGGCTGGTGT.............................2111.00101000
....................GTGGTATTTAGCGCGTGGCTCTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
.................CAGGTGGTATTTAGCGCGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
droVir3
TCGTCTATAATGCGTTACAGGTTGTATTTAGCGCGTGGCTATTCTATGAGGTAAGTGGCACTCACA--C---CAAACCAAATAACACGACCATCAACAT-C---AACA-ACAATAAGAACAACAACAACAAGAACAAC---ACCAACCACAA------------------------C-ATCAAT---CAA-CAA-CA-A-CAACAACAAC-----------A-------------ACATCGC-TGGCGTCGTCGT---------------TTTGGCTGCTT----G----CTTAACTG-------------AC-----CTGGAAA---AGCGTTTAAAG-GCA-------------AACAAC--TTGCTGCTGGGAAC--TGCCAACTGCCAACTGCC---------------------AACTGC-----CAACTCCCAACTGCTACTGCCAACTGCTACTGCCAATAGGCAACTGCCTTAAGGCAATTGGCAATTGCTGCTG------------------------CTTTT--AA-------------TG-TGCAC-T-TTATTTTATG----TTTTT-CTTATGTTCTCTCTATC----------------------------------------------------------------TCAT--TTTCTTTGGCATTAAT--CTGATTTCGTTTTTAGTGTTTAATGGGCGGCTGGTGGGGTTCGTACAGCTTCCGCTGTCAGCCTGTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....CTATAATGCGTTACAGGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002002000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAGTGTTTAATGGGCGGC...................................2011.001000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................................................................................................................TTGGCTGCTT----G----CTTAACTG-------------A.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................CTGCTGGGAAC--TGCCAACTGC.........................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................CTGCTT----G----CTTAACTG-------------AC-----CTGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAATAGGCAACTGCCTTAAG............................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................CTGCC---------------------AACTGC-----CAACTCCCA........................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................A-------------AACAAC--TTGCTGCTGGGAAC--T..................................................................................................................................................................................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
.............................................ATGAGGTAAGTGGCACTCACA--C---C......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000001000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGC-----CAACTCCCAACTGCTACTGCC............................................................................................................................................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
......ATAATGCGTTACAGGTTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................CAACAACAAGAACAAC---ACCAACCACAA------------------------C-.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGTGGGGTTCGTACAGCTTCCGCT..........2711.001000000001000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGTGTTTAATGGGCGGCTG.................................2111.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................CAACTGCC---------------------AACTGC-----CAACTCCCAA.......................................................................................................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
......................TGTATTTAGCGCGTGGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000010000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGTTCGTACAGCTTCCGCTGT........2211.001000000000000000000000000100000000000000000000000000000000000000
.....................................................................................................................................................................................AAT---CAA-CAA-CA-A-CAACAACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.102002000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................CAA-CA-A-CAACAACAAC-----------A-------------ACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000100000000000000000000000000000000000000000
droMoj3
TCATGTACAATGCGTTACAGGTTGTATTTAGTGCGTGGCTCTTCTATGAGGTAAGTGTC----GA----TTACAAGCAT--------------G---AACGCATG------------------------------------AACAAAC----------------ACAT-----CAT-CATC-AA---CAA-CAA-CA-A-CCACAACAAC-----------T-------------TTATGGC-TGGCGTCGTCGT------------CGTTTTGGCTGCTT----G----CTTAACTG-------------GC-----CCGCA-A---AGCGTTTAAATGACA-------------ATCAGC--TTGCAACGTGCAAC--GTGCAACTGGCAACTGGC---------------------AACTGA-----CAACAGGCAAATGTTACTG----CTGCTGCTGC--------------------------------TGCTGGCG------------------------CTTTT--AA-------------TG-TGCAC-T-TTATTTTATG----TTTTT-CTTACGTTCTCTCTATT----------------------------------------------------------------TCATTTTTCTTTTGGCATTAAT--CTGATTTTGTTTTTAGTGTTTAATGGGCGGCTGGTGGGGTTCGTACAGCTTCCGCTGTCAGCCAGTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAC-T-TTATTTTATG----TTTTT-CTTACGTT...................................................................................................................................................................2811.001100000
..ATGTACAATGCGTTACAGGTTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGTTCGTACAGCTTCCGCT..........2011.001100000
...........................TTAGTGCGTGGCTCTTCTATGAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.........................ATTTAGTGCGTGGCTCTTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.............GTTACAGGTTGTATTTAGTGCGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
......ACAATGCGTTACAGGTTGTATTTAGTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000001
...............................................................................................................................................................................T-CATC-AA---CAA-CAA-CA-A-CCACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.501100000
....................................................................................................................................................................................C-AA---CAA-CAA-CA-A-CCACAACAAC-----------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000010
droGri2
TCAGCTATAATGCGTTACAGGTTGTATTTAGCGCGTGGCTTTTCTATGAGGTATGTAATA---CACAA-CCAAC-----------------------ATTT---AACACACCACAAGAACAACAACAACAACAACCACAACCACAACCAAAA------------AC---CCATT----ATCAACCACCAA-CAA-CA-A-CAACAACAAA-----------A-----------ACTCAACGC-TGGCGTCGTCGT---------------TTTGGCTGCTT----G----C--AACTG-------------AC-----CTGGA-A---AGCGTTCCGAG-ACA-------------A-CAACAAATGCAACA-ACAACAAATGCAACA-AC----AAC---------------------AAATGCAACAACAAC----AAC----AATAACAACTGCT---GCCAACAACCAACT---------------------G-CGATG------------------------CTTTT--AA-------------TG-TGCAC-T-CTTTTTTATG----TTTTTTCATATGTTCTCTCTCTTATTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGCTTTGTCTAATTATCTATATAAT--TTTCTTTGCAATTAAT--TTAATTTTGTTTTTAGTGTTTAATGGGCGGCTGGTGGGGTTCGTACAGCTTCCGCTGTCAGCCCGTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.........................ATTTAGCGCGTGGCTTTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110
....CTATAATGCGTTACAGGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCT---GCCAACAACCAACT---------------------G-CG...........................................................................................................................................................................................................................................................2111.00110
.........................................................................................................ACACACCACAAGAACAACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110
droAna3
TCATGTACAATGCCATACAGGTTGTATTCAGCGCGTGGCTGTTCTACGAGGTAAGTAACT---CAG---CTCCG-----------------------AAT----------------------------------------------A--------------------------------GGTCT----T--CCC-AC-A-TG---GCAGC-----------TCCA--------TCTCATCGCGTGGCATCGTCGT------------------------CGCTG-ATTTCG---ACAGGACT-------CA-CCAGTG-----A-------------AC-TTC---ACCCCTCCGTC-G--------------------------------------------------------GACCCCC------------------------------------------------------------------------TGGAGAACACACACA-------------------TCTT--AA-------------TA-TATAT-T-TTTTTTTACG----CTTTT-GTT-TATCCTCACTCAC----------------------------------------------------------------CAGT--GCATTTTGCAACTAAT--GT--CTCT-GTTCTAGTGCTTGATGGGCGGCTGGTGGGGCTCGTACAGCTTCCGGTGCCAGCCGGTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTTGATGGGCGGCTGGTGGGGC..........................2511.001000001
..............ATACAGGTTGTATTCAGCGCGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCGTACAGCTTCCGGTGCC.......2111.001000001
.........................ATTCAGCGCGTGGCTGTTCTACGAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--CTCT-GTTCTAGTGCTTGATGGGCGGC...................................2711.001010000
....GTACAATGCCATACAGGTTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTCAC----------------------------------------------------------------CAGT--GCATTTTGC...........................................................................2011.001010000
....................GTTGTATTCAGCGCGTGGCTGTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
....................GTTGTATTCAGCGCGTGGCTGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
droBip1
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGCCACTAAT--GT--CTCT-GTTCTAGTGCTTGATGGGCGGCTGGTGGGGCTCGTACAGCTTCCGGTGCCAGCCGGTSizeHit CountTotal NormTotal
No Reads
droKik1
TCATGTACAATGCCATACAGGTTGTATTCAGCGCGTGGCTCTTCTACGAGGTAGGTACTC---CCCG-T---CCCTT---------------------------------------------------------------------CCCCATCC----------CCAT----------CCCACA----TT-CCA--C-A-TCCCAGCAGCAGCAGGTTCACC-----------CTTCATCGCGTGGCATCGTCGC------------------------TG--ACATTTGGATAACCGGACTCTCGAAGGA-ACCGTG-----G-------------AG-ACG-------------A-G--------------------------------------------------------GAC-ACA------------------------------------------------------------------------TC---GATG------------------------CTCCTCTGAGACCCAATTAATCCAATA---AC-TT-------AC-----------CCTG-----CTC--------------------------------------------------------------------GA--ATTATTTTGCAACTAAT--GT--CTCT-GTTCTAGTGCTTGATGGGCGGCTGGTGGGGCTCGTACAGCTTCCGGTGCCAGCCGGTSizeHit CountTotal NormTotal
No Reads
droFic1
TCTTGTACAATGCCATACAGGTTGTATTCAGCGCGTGGCTCTTCTACGAGGTAAGTTCCC---C-G--TCCCCC-----------------------CAT----------------------------------------------C-----------------CCCT-----CC---CCCACT---CCC-CCA--C---TTCCAGCAGC-----------TCCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TCATGTACAATGCCATACAGGTTGTATTCAGCGCGTGGCTCTTTTACGAGGTAGGTACTC---CC---T---CCCATC-------------------CC---------------------------------------------TCC-------------------------------CCCTCT----TC-CCAAAAAATTCCCCGCAGC-----------TTCA---------TTCATCGCATGGCATCGTCAT------CGTCATCGTCATCGTCGCTGGACC------------------------GA-TCCGTG-----G-------------AC-TTGTACA-----CTGGT-G--------------------------------------------------------GAC-CCG------------------------------------------------------------------------TGGAGGATG------------------------CTCCT--TA-------------CGTTA---AC-TTACGTTATAA-----------TCTG-----TTT--------------------------------------------------------------------G---TTTTTTTTGCAACTAAT--GT--CTCT-GTTCTAGTGCTTGATGGGCGGCTGGTGGGGCTCGTACAGCTTCCGGTGCCAGCCGGTSizeHit CountTotal NormTotal
No Reads
droRho1
TCATGTACAATGCCATACAGGTTGTATTCAGCGCGTGGCTCTTTTACGAGGTAGGTATTC---CCG--T---CCCAC---------------------------------------------------------------------C-----------------CC-----------GCAC-TC---TCC-CCA-AA-ATCCCCAGCAGC-----------TTCG---------TTCATCGCATGGCATCGTCGC------------------------TGGACC------------------------GC-TCCGTG-----G-------------AC-TTGTGGA-----CTTGT-G--------------------------------------------------------AAC-TCG------------------------------------------------------------------------CGGAGGATG------------------------CCTCT--TA-------------CTTTC---ACGTT--GTTATAA-----------TCTG-----------------------------------------------------------------------------------TTTTTGCTACTAAT--GT--CTCT-GTTCTAGTGCTTGATGGGCGGCTGGTGGGGCTCGTACAGCTTCCGGTGCCAGCCGGTSizeHit CountTotal NormTotal
No Reads
droBia1
TCATGTACAATGCCATACAAGTTGTGTTCAGCGCGTGGCTCTTCTACGAGGTAGGTTGTC---CAC--T---CCCATCC------------------CA----------------------------------------------TT-------------------------------CCC-TT---TCC-CCA--C-A-TCCCAGCAGC-----------T-CA---------TTCATCGCGTGGCATCGTCGC------------------------TGGACT------------------------GA-CCCGTG-----A-------------AC-ACG-------------C-G--------------------------------------------------------GAC-CCG------------------------------------------------------------------------TGGAGGATG------------------------CTTTA--TG-------------CTCTA---AT-TT-------AA-----------CCTG----------------------------------------------------------------------------------TTTTTTGCCACTAAT--GT--CTCT-GTTCTAGTGCTTGATGGGCGGCTGGTGGGGCTCGTACAGCTTCCGGTGCCAGCCGGTSizeHit CountTotal NormTotal
No Reads
droTak1
TCATGTACAATGCCATACAGGTTGTATTCAGCGCGTGGCTCTTCTACGAGGTAGGTACTC---CAA--T---CCCATCC------------------CA----------------------------------------------CC-----------------CCAT----------CCCTCT----TCCCCA--C-A-TCCCAGCAGC-----------TTCA---------TTCACCGCGTGGCATCGTCGC------------------------TG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
TCATGTACAATGCCATACAGGTTGTTTTCAGCGCGTGGCTCTTTTACGAGGTAGGTATTC---CAA--A---CCCAACC------------------CA----------------------------------------------TCCATAT---------------------------CCTCT----T--CCA-AC-A-TTCTAGCAGA-----------CTCA---------TTTAACGCATGGCATCGTCGC------------------------TG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
TCATGTACAATGCCATACAGGTTGTATTTAGCGCATGGCTGTTTTATGAGGTAGGTATTC---CCGAA-CCACC-----------------------CATCCATCCCAT--------------------------------CCCACC-----------------CCGC----------CCCACT---TCC-CCA-TC-A-TCCCAGCAGC-----------T-----------TTTCATCGCGTGGCATCGTCGC------------------------TG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........TGCCATACAGGTTGTATTTAGCGCATGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TACAGGTTGTATTTAGCGCATGGCTGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
......ACAATGCCATACAGGTTGTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............CATACAGGTTGTATTTAGCGCATGGCTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................CGAA-CCACC-----------------------CATCCATCCCAT--------------------------------CCCACC-----------------C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................ACAGGTTGTATTTAGCGCATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TTAGCGCATGGCTGTTTTATGAGTGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................CAGGTTGTATTTAGCGCATGGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TGCCATACAGGTTGTATTTAGCGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................CGAA-CCACC-----------------------CATCCATCCCAT--------------------------------CC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TCATGTACAATGCCATACAGGTTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................TTC---CCGAA-CCACC-----------------------CATCCATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TGCCATACAGGTTGTATTTAGCGCAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GTTGTATTTAGCGCATGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TAGCGCATGGCTGTTTTATGAGTGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................TATTTAGCGCATGGCTGTTTTATGAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TTGTATTTAGCGCATGGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
droSim2
TCATGTACAATGCCATACAGGTTGTATTTAGCGCATGGCTGTTTTATGAGGTAGGTATTC---CCGAA-CCACC-----------------------CAT----CCCAT--------------------------------CCCACCCACAC--NNNNNNNNNN------------C-ACCACT---TCC-CCA-TC-A-TCCCAGCAGC-----------T-----------CTTCATCGCGTGGCATCGTCGC------------------------TG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....GTACAATGCCATACAGGTTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
............CCATACAGGTTGTATTTAGCGCATGGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100010000000000000
.....................TTGTATTTAGCGCATGGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000000000
droSec2
TCATGTACAATGCCATACAGGTTGTATTTAGCGCATGGCTGTTTTATGAGGTAGGTATTC---CCGAA-CCACC-----------------------CAT----CCCAT--------------------------------CCCACCCACACCC----------CCACCC---CACC-ACCACT---TCC-CCA-TC-A-TCCCAGCAGC-----------T-----------CTTCATCGCGTGGCATCGTCGC------------------------TG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................GCATGGCTGTTTTATGAGGTAGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100
droYak3
TCATGTACAATGCCATACAGGTTGTTTTTAGCGCATGGCTGTTTTATGAGGTAGGTATTC---CCG--T---CCCA-CC------------------CAT----------------------------------------------C-----------------AGAT-----CTC-GCCC-TT---GTC-CCA-TC-A-TCCCAGCAAC-----------T-----------TATTATCGCGTGGCATCGTCGC------------------------TG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............ATACAGGTTGTTTTTAGCGCATGGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
.....TACAATGCCATACAGGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000
....................................................................................................................................................................................................C-A-TCCCAGCAAC-----------T-----------TATTATCGCGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
..................................ATGGCTGTTTTATGAGGTAGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.........ATGCCATACAGGTTGTTTTTAGCGCATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100000000
.......................GTTTTTAGCGCATGGCTGTTTTAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
droEre2
TCATGTACAATGCCATACAGGTTGTATTTAGCGCATGGCTGTTTTATGAGGTAGGTATTC---CCA--T---CCCATCC------------------CA----------------------------------------------TC-----------------CCAT-----CCC-G-CC-TT---TTC-CCA-TC-A-TCCCAGCAAC-----------T-----------TATCATCACGTGGCATCGTCGC------------------------TG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................ATTTAGCGCATGGCTGTTTTATGAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000003
.............CATACAGGTTGTATTTAGCGCATGGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000
..............ATACAGGTTGTATTTAGCGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
..............ATACAGGTTGTATTTAGCGCATGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
...TGTACAATGCCATACAGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
....................GTTGTATTTAGCGCATGGCTGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001000
......................TGTATTTAGCGCATGGCTGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100

Generated: 06/08/2015 at 04:09 PM