ID:

dpe_1408

 Coordinate:

scaffold_3:6372643-6372793 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-15.2 -15.1 -14.4

Flybase annnotation

exon [dper_GLEANR_3626:8]; CDS [Dper\GL21527-cds]; intron [Dper\GL21527-in]

Repeatable elements

NameClassFamilyStrand
Helitron-1N1_DVirRCHelitron-
mature
  1. scaffold_42:261828-261847 -
  2. scaffold_198:16-35 -
  3. scaffold_2:371801-371820 +
  4. dpe_1408  scaffold_3:6372679-6372698 -
  5. scaffold_64:22215-22234 -
  6. scaffold_52:293115-293134 +
  7. scaffold_2983:248-267 -
  8. scaffold_3652:490-509 -
  9. scaffold_4689:43-62 +
  10. scaffold_8269:1281-1300 -
  11. scaffold_5941:619-638 -
  12. scaffold_6869:856-875 +
  13. scaffold_2073:5243-5262 -
  14. scaffold_9988:31-50 -
star
  1. scaffold_22:929942-929964 -
  2. scaffold_177:23341-23363 +
  3. scaffold_177:44755-44777 +
  4. scaffold_110:26803-26825 -
  5. scaffold_1:117128-117150 -
  6. dpe_1408  scaffold_3:6372731-6372753 -
  7. scaffold_5:2935929-2935951 -
  8. scaffold_16:1304279-1304301 +
  9. scaffold_4537:1604-1626 -
  10. scaffold_2019:398-420 -
  11. scaffold_7945:370-392 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTTATCACCATTGGTATTCAGGACTACCGATATAGGAACGAGTATTACAAGTGAGTGTATTACACCTTGGGCTCTTTTTATACCCGATACTCAAAATGGGTATTGGGGTATATTAGATTTGTGGTGAAAGTGGATGTGTGTAACGTCCAGAGGGAATCGTTTCCGACTCCATAAAGTATATATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCATGTCTGTCTGTCCGTCCGTCCGTCTGTCCG
******************************************************************************************......(((......................((((.....(((((((.....)))))))......))))...)))************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V057
head
 M042
female body
 V050
head
 V111
male body
..TAGCACCATTAGAATTCAGGACT.................................................................................................................................................................................................................................. 23 3 1 1.00 1 1 0 0 0
..TATCACCATTGGAACTCAG...................................................................................................................................................................................................................................... 19 2 1 1.00 1 1 0 0 0
..TAGCACCATTCGTAATCAGG..................................................................................................................................................................................................................................... 20 3 2 1.00 2 1 0 1 0
..TAACACCATTCGTAATCAGG..................................................................................................................................................................................................................................... 20 3 1 1.00 1 0 0 1 0
..TATCACCATTCGAATTCAGGGCT.................................................................................................................................................................................................................................. 23 3 2 0.50 1 1 0 0 0
................................................................................................................................................................................................................GTCGATTGAGCCATGTCTGTC...................... 21 0 20 0.45 9 0 9 0 0
..TAACACCATTCGTAGTCAGG..................................................................................................................................................................................................................................... 20 3 4 0.25 1 1 0 0 0
........................................................................................................................................................................................................................AGCCATGTCTGTCTGTCCGTC.............. 21 0 20 0.25 5 0 5 0 0
.................................................................................................................................................TCCAGAGGGAATCGTTTCCG...................................................................................... 20 0 14 0.21 3 0 0 0 3
..........................................................................................TCAAAATGGGTATTGGGGTATAT.......................................................................................................................................... 23 0 11 0.18 2 0 2 0 0
..........................................................................................TCAAAATGGGTATTGGGGTATA........................................................................................................................................... 22 0 11 0.18 2 0 2 0 0
..TAGCACCATTGGTAATCAGT..................................................................................................................................................................................................................................... 20 3 9 0.11 1 1 0 0 0
......................................................................................................................................TGTGTGTAACGTCCAGAGGG................................................................................................. 20 0 18 0.11 2 0 1 0 1
.......................................................................................TACTCAAAATGGGTATTGGGGTATATT......................................................................................................................................... 27 0 10 0.10 1 0 1 0 0
.......................................................................................TACTCAAAATGGGTATTGGGGTAT............................................................................................................................................ 24 0 11 0.09 1 0 1 0 0
..........................................................................................TCAAAATGGGTATTGGGGTATATT......................................................................................................................................... 24 0 11 0.09 1 0 1 0 0
..TAGCACCATTCGTAGTCAG...................................................................................................................................................................................................................................... 19 3 12 0.08 1 1 0 0 0
.............................................................................TTATACCCGATACTCAAAATGGG....................................................................................................................................................... 23 0 13 0.08 1 0 1 0 0
..................................................................................................................................................CCAGAGGGAATCGTTTCCGA..................................................................................... 20 0 14 0.07 1 0 0 0 1
.......................................................................................................................................GTGTGTAACGTCCAGAGGGAAT.............................................................................................. 22 0 14 0.07 1 0 1 0 0
........................................................................................................................................TGTGTAACGTCCAGAGGGAA............................................................................................... 20 0 17 0.06 1 0 0 0 1
.......................................................................................................................................GTGTGTAACGTCCAGAGGGA................................................................................................ 20 0 19 0.05 1 0 0 0 1
.........................................................................................................................................GTGTAGCGTCCAGAGGGAATCG............................................................................................ 22 1 19 0.05 1 0 0 0 1
..............................................................................................................TATTAGATTTGTGGTGAAAG......................................................................................................................... 20 0 20 0.05 1 0 0 0 1
.........................................................................................................................................GTGTAGCGTCCAGAGGGAATC............................................................................................. 21 1 20 0.05 1 0 0 0 1
.......................................................................................................................................GTGTGTAGCGTCCAGAGGGA................................................................................................ 20 1 20 0.05 1 0 0 0 1
........................................................................................................................GTGGTGAAAGTGGATGTGTGTAAA........................................................................................................... 24 1 20 0.05 1 0 0 0 1
..........................................................................................................................................TGTAGCGTCCAGGGGGGATCG............................................................................................ 21 3 20 0.05 1 0 0 0 1
.......................................................................................................................................GTGTGTAGCGTCCGGAGGGA................................................................................................ 20 2 20 0.05 1 1 0 0 0
...............................................................................................................................................................................................TCAGCATCAATAGCCGAGT......................................... 19 0 20 0.05 1 0 0 0 1
........................................................................................................................................................................................................ATAGCCGAGTCGATTGAGCC............................... 20 0 20 0.05 1 1 0 0 0
.........................................................................................................................................GTGTAACGTCCAGAGGGAATT............................................................................................. 21 1 20 0.05 1 0 0 0 1
..........................................................................................TCAAAATGGGTATTGCGGTATATT......................................................................................................................................... 24 1 20 0.05 1 0 1 0 0
..............................................................................................AATGGGTATCGGGGGATA........................................................................................................................................... 18 2 20 0.05 1 1 0 0 0
..........................................................................................TCAAAATGGGTATTGGGGTAA............................................................................................................................................ 21 1 20 0.05 1 0 1 0 0
................................................................................................TGGGTATTGGGGTGTATTAGA...................................................................................................................................... 21 1 20 0.05 1 0 1 0 0
.................................................................................................................................................TCCAGAGGGAATCGTTTCCGT..................................................................................... 21 1 20 0.05 1 0 0 0 1
.......................................................................................................................................GTGTGTAACGTCAAGAGGGAATCGTT.......................................................................................... 26 1 20 0.05 1 0 1 0 0
......................................................................................................................................TGTGTGTAGCGTCCGGAGGGA................................................................................................ 21 2 20 0.05 1 0 0 1 0
...........................................................................................................................................................................................................GCCGAGTCGATTGAGCCA.............................. 18 0 20 0.05 1 0 0 1 0

Anti-sense strand reads

GAATAGTGGTAACCATAAGTCCTGATGGCTATATCCTTGCTCATAATGTTCACTCACATAATGTGGAACCCGAGAAAAATATGGGCTATGAGTTTTACCCATAACCCCATATAATCTAAACACCACTTTCACCTACACACATTGCAGGTCTCCCTTAGCAAAGGCTGAGGTATTTCATATATATAAGAACTAGTCGTAGTTATCGGCTCAGCTAACTCGGTACAGACAGACAGGCAGGCAGGCAGACAGGC
**************************************************************************************......(((......................((((.....(((((((.....)))))))......))))...)))****************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V111
male body
.AGTAGTGGGATCCATAAGTC...................................................................................................................................................................................................................................... 20 3 2 0.50 1 1 0
.............................................................................................................................CTTTCACCTACACACATTGCAGGTCT.................................................................................................... 26 0 20 0.45 9 9 0
.......................................................................................................................ACACCACTTTCACCTACACACATTGC.......................................................................................................... 26 0 20 0.30 6 6 0
...........................................................................................................................AACTTTCACCTACACACATTGCAGGTCT.................................................................................................... 28 1 20 0.25 5 5 0
.........................................................................................GAGTTTTACCCATAACCCCAT............................................................................................................................................. 21 0 11 0.09 1 1 0
.............................................................................................TTTACCCATAACCCCATAGAATCTAAA................................................................................................................................... 27 1 12 0.08 1 1 0
......................................................................................................................................ACACACATTGCAGGTCTCCCTTAGC............................................................................................ 25 0 13 0.08 1 1 0
.............................................................................................................................................................................................................GCTCAGCTAACTCGGTACAGACAG...................... 24 0 20 0.05 1 1 0
..........................................................................................................................CCACTTTCACCTACACACATTGCA......................................................................................................... 24 0 20 0.05 1 1 0
......................................................................................................................AACACCACTTTCACCTACACACATTGC.......................................................................................................... 27 0 20 0.05 1 1 0
......................................................................................................................AACACCACTTTCACCTACACACATTG........................................................................................................... 26 0 20 0.05 1 1 0
..........................................................................................................................................................TTAGCAAAGGCTGAGGTATTT............................................................................ 21 0 20 0.05 1 0 1
.......................................................................GAGAAAAATATGGGCTATGAGTTTTA.......................................................................................................................................................... 26 0 20 0.05 1 1 0
...................................................................................................................CTAAACACCACTTTCACCTACACA................................................................................................................ 24 0 20 0.05 1 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_3:6372593-6372843 - dpe_1408 CTT-ATCACCAT----TGGTATTCAGGA----------CTA-----------------------------CCGATATAGGAACG---------------------------------AGTA--TT------ACAAGTGA-----------G-TGTAT---T-----AC---------ACCTT---GG-GCTCTTTTTATACCCGATACTCA----AAATGGGT-ATTGGGGTA------TATTAGATTTGTGGTGAAAGTGGATGTGTGTAACGTCCAGAGGGAATCGTTTCCGACTCCATAAAGTAT-----ATATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCATGTCTGTCTGTCCGTC-CG----TCCGTCTGTCCG
dp5 2:23597941-23598175 - dps_751 CTA-ATCACCAT----TGGTATTCAGGA----------CTA-----------------------------CCGATATAGAAACG---------------------------------AGTA--TT------ACAAGTGA-----------G-TATAT---T-----AC---------ACCTT---GG-GCTCTTTTTATACCCGATACTCA----AAATGAGT-ATTGGGGTA------TATTAGATTTGTGGTGAAAGTGGATGTGTGTAACGTCCAGAGGGAATCGTTTCCGA--------AGTAT-----ATATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCATGTCTGTCTGTCCGTC-CG----TC--------CG
droWil2 scf2_1100000004902:5650793-5651028 + CTT-ATGTACAT----GGGTATACACTG--------AAGTA-----------------------------TCTATGTATGTAC----------------------------------AGTG--GT------GGACACGA-----------A-TTTAA---G-----AC--------------------GTTTTTTTTGTACCATACACCCA----TA--GGGT-GAAATGGTA------TATTAAAGTCGCCAA-------AATGTATGTAACAGGCAGAAGGAAGCATCTCCGACCCCACAAAGTAT-----ATATATTCTTGATCAGGATCAACAACCGAGTCGATCTAGCCATGTCCGTCTGTCCGTC-CG----TCCGTCTGTCCG
droVir3 scaffold_12963:1295550-1295801 - CTT-AATACCAT----TAATAAGCTGGTAATCTATATAT-------------------------------------CAAAAACG---------------------------------CGTA--TGT------------------------A-GCTACTGAGATATTAC---------CCTTT-------TTCCATTAATCCCCTGAATCCATTAAAAATGGGT-ATAAGGTTA------TATTGTATTTGTGCAAAATCCAAATGTATGTAACAGGCAGAAGGAAGCATCTCCGACCCCATAAAGCAT-----ATATATTCTTGATCAGCATCAATAGCCGAGTCGATCTAGCCATGTCCGTCTGTCTGTC-CG----TCCGTATGT---
droMoj3 scaffold_4895:207-452 - TTC-ATTCCCTC----TGGCATCTCGGAAATCCCTAT-------------------------TACCATGAAT--GATC--------------------GA------AACTA-------GG-----------------AT-----------G-TGCAT---T-----T----------------TC---CCTTTTTTTATACCCTGAACCCATTTTCAATGGGAAATCAGGGTA------TAATGGTTTTATTGA-------AATGTATGTAACAGGCAGAAGGAGGCGTGGCAGACCCCATAAAGTAT-----ATATATTCTTGATCAGGGCGACGAGCTGAGTTGATTGGGCCCTGTCCGTCTGTCTGTC-CG----TTCGTCCGTCCG
droGri2 scaffold_15110:18774963-18775160 - TAA-A---------------------------------------------------------------------------AACG---------------------------------ATTA--CT------TC--------------------------------------GAC--------------TATATTATTATACCCTAAGCCCATTAAAAATGAGTAAAAAGGGTA------TAATGGTTTTGTGCA-------AATGTATGTAACAGGCAGAAGAAAGCATCTCCGACCCCATAAAGTAT-----CTATATTCTTGATCAGAGTCAACAGCCGAGTCGATATAGCCATGTCCCTCCGTCCGTC-CG----TCCGTCCGTCTG
droAna3 scaffold_13767:1231990-1232223 + CTT-CCCTGAAT----CAATTCTCTGGA----------TGG-----------------------------CCGA--------------------------------GATGAGTAGCAGATCTCTT------ACCA--AG-----------AGAAGCT---T-----GC---------CCCAT---GCACGCATTTTTATACCCTT-----G----C---------AGAGGGTA------TTATAATTTTGGTCA-------AAAGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCCATAAAGTAT-----ATATATTCTTGATCAGGATCACCTCCTGAGTCGATATGAGCATGTCCGTCTGTCCGTC-TG----TCCGTCTGTCCG
droBip1 scf7180000396714:352891-353119 - GAT-A----------------ATCAGGATGTACCTAT-------------------------------------CATAGGGATT---------------------------------TGT------------------------------A-TATACTGCTGTATAGCCTTT-----ACTT-------CGAGTTTTTATACCGGGTACTCG----T--------ACAAGGGTA------TATTGTAGTCGTGTT-------AATGTATGTAACATAGAGAAGGAATAATCTCCGACCCCAAAAAGTATTTA-TGTATATTCTTGATCAGCATCAACAGCCGAGTTGATATAGCCACGTCCGTCTGCCCGAC-CG----TTCGTCTGTCCG
droKik1 scf7180000298787:21072-21281 - ATT-GGT-------------ATTTAGGA----------CT------------------------------------CCAAAATG---------------------------------CG------------GCAGATAATATGTCAGTGTT---------------GC---TAC--------------TTCATTTTTATACCCTT-----G---------------CAGGGTA------TTATAATTTCAGTCA-------GAAGTTTGCAACGCAGTGAAGGAGACGTTTCCGACCCTATAAAGTAT-----ATATATTCTTGATCAGCATCAACAGCCGAGTCGATCTAGCCATGTCCGTCTGTCCGTC-TG----TCCGTCTGTCCA
droFic1 scf7180000449699:27022-27262 + TTT-ATTGGTGAGCAATTAAACTCTAGA----------TATACATACGT------GT-----ATGTACAAAT--TGTA--------------------GA-------------------------------------AA-----------G-TAAAT---T-----AT---------ACATA---TA-TGTATATTTATACCC-----TTG----CA--GAGC-AAAAGAGTA------TTATAATTTCAGTCA-------AAAGTTTGCAACGCAATGAAGGAGACACCTTGGACCCCATAAAGTAT-----ATATATTCTTGATCAGCATCACGATCAGAATCGAAATACGTCTGTACGTCTGTACGTC-TG----TCCGTCTGTCCG
droEle1 scf7180000490464:897-1144 - CCT-ATAGCTGC-------CATTTTCTG--------TCATA-----------------------------CTGACCAT---ACG--------------------------GAC----AGTA--TA------AAAAATAA-----------A-TTCTT---G-----AC---------ACCTT---ACAAATCCTTTTGTACCCGTTACTCG----TC--GAGT-AAATACCTATGTATATATTGTATTCGTTGA-------AAAGTATGTTACAGGCAGAAGCGTGCGTTTCCGACCATATAGAGTAT-----ATATATTTTTGATAAGGATCAATAGCCGGGTCGATCTAGCTAGGTCCGTCTGTCCGTC-CG----TCTGTCTGTCCG
droRho1 scf7180000773739:22653-22890 - CTC-CATGTCAA-----------------------------------------------------CATGGAT--TTAT--------------------AAGGCGAAGATCTACGACGCGTC--CC------ACAAGGAA-----------G---------------CC---------ACCTTGGC---CCACTTTTTATACCCGTTACTCG----TA--GAGT-AAAAGGGTA------TATTGTATTCGTGCA-------AAAGTATGTAACAGCTAGAAGGAAGCGTTTCCGACCCTATAAAGTAT-----ATATATTCTTGATCAGGGTCACTAGCCGAGTCGATATAGCCATGTCCGTCTGTCCGTC-TG----TCTGTCTGTCCG
droBia1 scf7180000301391:18181-18423 + TTT-ATCAAAAT----CGG--------A----------CGA--------TTATGTCAAATAG--------CTGCCATAGGAACGATCTGAAAATTAGTGA------------ACAAAAATA---------------------------------------------TT---------TCTTT------GGTGTTTTTATACCCGTTACTCG----TA--GAGT-GAAAGGTTA------T-CTAGATTCGTTGG-------ATAGTATTTTATAGGTA-AAGGAAGCGTTTCTGACCCCATAAAGTAT-----ATATATTCTTGATCAGGATCACTAGCAGAGTCGTTCTAGCCATACCCGCCTGTCCGTC-CG----TCCGTATG----
droTak1 scf7180000415088:433-674 - CTG-GTTATCAA----TAGTTCTCCTGC----------TTA-----------------------------ATGACTTTGAAATT-----------ATGGA------------TGACAAATT-----------------------------T-TTTAC---T-----AA---------CCCTC---TG-ACCGTTTTTATACCCGTTACTCG----TA--GAGT-AAAAGGGTA------TACTAGATTCGTGCA-------AATGTATGTAACAGCTAGAAGGAAGCGTTTCCGACCCCATAAAGTAT-----ATATATTCTTGATCAGGGTCACTAGCCGAGTCGATCTAGCCATGTCCGTCTGTCCGTC-TG----TCCGTCTGTCTG
droEug1 scf7180000406964:154595-154830 + ACA-ATTGGTGG-------CGCTTTGGGAA--------TTT-----------------------------CCACTAGCAAAATA---------------------------------AATA--TT------CTAAA------------ATT---------------GT---GACTATAGCGT-TT---CCTCTTGTTATACCCGTTACTCG----TA--GAGT-AAAAGGGTA------TACTAGATTTGTTGA-------AAAGTATGTAACAGATAGAAGGAAGCGTTTCCGACTCTATAAAGTAT-----ATATACTCTTGATCAGGGTCAATAGCGAAGTCGATTGAGCCATGTCCGTCTGTCCGTT-CA----TCCGTATG----
dm3 chrX:18787984-18788197 + ATT-ACA---AT----TTCTATAT-------------------------------CAATTTA--------CCGGTTCAGCAACG---------------------------------GGGA--TT------CAA----------------A-TCTGA---C-----T------------TGT-TA---TCCATTTTTATACCCGTTACTCG----AA--GAGT-AAAAGGGTA------CCCTAAATTTGTTGA-------AAAGTATGTAGCAGTCAGAAGAAGGCGTTTCCGACCATGTACAGTAT-----ATATATTCTTGATCAG-----------GAGTCGATCTAGTCATGTCCGTCTGTCCGCCATG----TCCGT-------
droSim2 2r:21507461-21507680 - GAA-ATAATAAT-----------------------------------------------------------------------G---------------------------------GGTA--TTTAATAGCCGAGTCA-----------C-TCCAT---T-----TT---------AGCTT-TT---TATCTTTGTATACCCGTTACTCG----TA--GAGT-AAAAGGGTA------TACTAGATTCGTTGA-------AAAATGTGTAACAGGCAGAAGGATGCGTTTCCGACCATATAAAGTATGTA-CATATATTCTTGATCAGGATCAATAGCCGAGTCGATCTGGCCATGTCCGTCTGTCCGGA-TG----TCCGTATG----
droSec2 scaffold_39:310386-310593 + AAC--------------------------------------------------------------------------------G---------------------------------GGTA--TCTTTTAGGCAGGTAA-----------G-TCGAC---T-----AT---------AGCGT-TC---TCTCTTGTTAAACCTGTTAGTCG----CA--GAGT-AAAAGGATT------TACTAGATTCGCTGA-------AAAGTATGTAACAGGCAGAGGGAAGCGTTTCCGACTATATAAAGTA---------TATTCTTGATCAGAAATAATAGCCGAGTCGATCTGGCCATGTCAGTCTGCCCGTC-CG----TCCGTATTTACG
droYak3 X:20411848-20412088 + TTT-GTTAAAAT----TATTTTTTAGGA----------CAA-----------------------------TT--TATAGGAGAG---------------A------AATTATTAG--GGGA--TT------------------------------AT---T-----AA----------TTTG---TA-GATATTTTTATACCCGTTACTCG----TA--GAGT-AAAAGGGTA------TACTAGATTCGTTGA-------AAAGTATGTAACAGGCAGAAGGAAGCGTTTCCGACCATATAAAGTAT-----ATATATTCTTGATCAGGATCAATAGCCGAGTCGATTTGGCCATGTCCGTCTGTCCGTC-CGTCTGTCCGTCTGTCCG
droEre2 scaffold_4770:391475-391689 - AGGAATTATAAT----TATTATTG-------------------------------CAA-------------------------G---------------------------------GGTA--TA-----------------------------------------AT---------TCTGC---AG-GGTATTGGTATACCCGTTACTCT----TA--GGGT-AAAATGGTA------TAATAGATTCGTTGA-------AAAGTATGTAACAG-CAGAGGGAAGCGTTTCCGACCATATAAAGTATATAATATATATTATTGATCAGGATCAATGGCCGAGTCGAATTGGCCATGTCCGTTTGCCTGTC-CG----TTCATTTGTCCG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
CTT-ATCACCAT----TGGTATTCAGGA----------CTA-----------------------------CCGATATAGGAACG---------------------------------AGTA--TT------ACAAGTGA-----------G-TGTAT---T-----AC---------ACCTT---GG-GCTCTTTTTATACCCGATACTCA----AAATGGGT-ATTGGGGTA------TATTAGATTTGTGGTGAAAGTGGATGTGTGTAACGTCCAGAGGGAATCGTTTCCGACTCCATAAAGTAT-----ATATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCATGTCTGTCTGTCCGTC-CG----TCCGTCTGTCCGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................................................................................................................................................................................................................................................................................................................GTCGATTGAGCCATGTCTGTC...........................21200.459090000
..............................................................................................................................................................................................................................................................................................................................................................AGCCATGTCTGTCTGTCCGTC-..................21200.255050000
..................................................................................................................................................................................................................................................................................TCCAGAGGGAATCGTTTCCG................................................................................................20140.213000003
................................................................................................................................................................................................................TCA----AAATGGGT-ATTGGGGTA------TAT....................................................................................................................................................23110.182020000
................................................................................................................................................................................................................TCA----AAATGGGT-ATTGGGGTA------TA.....................................................................................................................................................22110.182020000
.......................................................................................................................................................................................................................................................................TGTGTGTAACGTCCAGAGGG...........................................................................................................20180.112010001
.............................................................................................................................................................................................................TACTCA----AAATGGGT-ATTGGGGTA------TATT...................................................................................................................................................27100.101010000
.............................................................................................................................................................................................................TACTCA----AAATGGGT-ATTGGGGTA------T......................................................................................................................................................24110.091010000
................................................................................................................................................................................................................TCA----AAATGGGT-ATTGGGGTA------TATT...................................................................................................................................................24110.091010000
...................................................................................................................................................................................................TTATACCCGATACTCA----AAATGGG........................................................................................................................................................................23130.081010000
...................................................................................................................................................................................................................................................................................CCAGAGGGAATCGTTTCCGA...............................................................................................20140.071000001
........................................................................................................................................................................................................................................................................GTGTGTAACGTCCAGAGGGAAT........................................................................................................22140.071010000
.........................................................................................................................................................................................................................................................................TGTGTAACGTCCAGAGGGAA.........................................................................................................20170.061000001
........................................................................................................................................................................................................................................................................GTGTGTAACGTCCAGAGGGA..........................................................................................................20190.051000001
...............................................................................................................................................................................................................................................TATTAGATTTGTGGTGAAAG...................................................................................................................................20200.051000001
.........................................................................................................................................................................................................................................................GTGGTGAAAGTGGATGTGTGTAAA.....................................................................................................................24200.051000001
.....................................................................................................................................................................................................................................................................................................................................TCAGCATCAATAGCCGAGT..............................................19200.051000001
..............................................................................................................................................................................................................................................................................................................................................ATAGCCGAGTCGATTGAGCC....................................20200.051000010
..........................................................................................................................................................................................................................................................................GTGTAACGTCCAGAGGGAATT.......................................................................................................21200.051000001
................................................................................................................................................................................................................TCA----AAATGGGT-ATTGGGGTA------A......................................................................................................................................................21200.051010000
..................................................................................................................................................................................................................................................................................TCCAGAGGGAATCGTTTCCGT...............................................................................................21200.051000001
.................................................................................................................................................................................................................................................................................................................................................GCCGAGTCGATTGAGCCA...................................18200.051000100
dp5
CTA-ATCACCAT----TGGTATTCAGGA----------CTA-----------------------------CCGATATAGAAACG---------------------------------AGTA--TT------ACAAGTGA-----------G-TATAT---T-----AC---------ACCTT---GG-GCTCTTTTTATACCCGATACTCA----AAATGAGT-ATTGGGGTA------TATTAGATTTGTGGTGAAAGTGGATGTGTGTAACGTCCAGAGGGAATCGTTTCCGA--------AGTAT-----ATATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCATGTCTGTCTGTCCGTC-CG----TC--------CGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................................................................................................................AAAGTGGATGTGTGTAACGTC..................................................................................................................21201.803600000036000
........................................................................................................................................................................................................................................................TGTGGTGAAAGTGGATGTGTG.........................................................................................................................21200.651300000031000
........................................................................................................................................................................................................................................................TGTGGTGAAAGTGGATGTGTGTAACG....................................................................................................................26200.601201200000000
..................................................................................................................................................................................................................................................................................TCCAGAGGGAATCGTTTCCGA--------.......................................................................................2150.4020200000000
..............................................................................................................................................................................................................................................................................................................................TTCTTGATCAGCATCAATAGCCG.................................................23200.3570700000000
.....................................................................................................................................................................................................................................................................................................................................TCAGCATCAATAGCCGAGTC.............................................20200.3570700000000
................................................................................................................................................................................................................TCA----AAATGAGT-ATTGGGGTA------T......................................................................................................................................................21200.3060000006000
........................................................................................................................................................................................................................................................TGTGGTGAAAGTGGATGTGTGT........................................................................................................................22200.3060600000000
.....................................................................................................................................................................................................................................................................................................................................................................TCTGTCTGTCCGTC-CG----TC--------C.19200.2550500000000
................................................................................................................................................................................................................................................................................CGTCCAGAGGGAATCGTTTCC.................................................................................................2140.2510100000000
...........................................................................................................................................................................................................................................................................TGTAACGTCCAGAGGGAATCG......................................................................................................2140.2510100000000
.............................................................................................................................................................................................................................................................TGAAAGTGGATGTGTGTAAC.....................................................................................................................20200.2550500000000
...........................................................................................................................................................................................................................................................................................................................................TCAATAGCCGAGTCGATTGAGCC....................................23200.2550500000000
.......................................................................................................................................................................................................................................................................TGTGTGTAACGTCCAGAGGGAA.........................................................................................................2240.2510000001000
.......................................................................................................................................................................................................................................................................TGTGTGTAACGTCCAGAGGG...........................................................................................................2040.2510000001000
..........................................................................................................................................................................................................................................................................GTGTAACGTCCAGAGGGAATC.......................................................................................................2140.2510100000000
........................................................................................................................................................................................................................................................................................................................................................CGATTGAGCCATGTCTGTC...........................19200.2550500000000
..................................................................................................................................................................................................................................................................................TCCAGAGGGAATCGTTTCCG................................................................................................2050.2010100000000
.....................................................................................................................................................................................................................................................................GATGTGTGTAACGTCCAGAGG............................................................................................................2160.1710100000000
.......................................................................................................................................................................................................................................................TTGTGGTGAAAGTGGATGTGTGTAACG....................................................................................................................27200.1530300000000
.................................................................................................................................................................................................................................................................................................................................TTGATCAGCATCAATAGCCGAGTCGATT.........................................28200.1530000000300
...........................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGCATCAATAGC...................................................24200.1530000000300
.....................................................................................................................................................................................................................................................ATTTGTGGTGAAAGTGGAT..............................................................................................................................19200.1020200000000
......................................................................................................................................................................................................................................................TTTGTGGTGAAAGTGGATGTGTGTAAC.....................................................................................................................27200.1020000000020
...............................................................................................................................................................................................................................................TATTAGATTTGTGGTGAAAG...................................................................................................................................20200.1020000000020
.................................................................................................................................................................................................................................................TTAGATTTGTGGTGAAAGTGGATGT............................................................................................................................25200.1020000000200
.....................................................................................................................................................................................................................................................................................................................................TCAGCATCAATAGCCGAGTCGATTGAGCC....................................29200.1020200000000
..........................................................................................................................................................................................................................................................TGGTGAAAGTGGATGTGTG.........................................................................................................................19200.1020000000020
....................................................................................................................................................................................................................................................GATTTGTGGTGAAAGTGG................................................................................................................................18200.1020200000000
.....................................................................................................................................................................................................................................................................................................................................................................TCTGTCTGTCCGTC-CG----TC--------CG20200.1020000000020
..........................................................................................................................................................................................................................................................................................................................TATATTCTTGATCAGCATCAA.......................................................21200.1020000000200
...............................................................................................................................................................................................................................................TATTAGATTTGTGGTGAAAGTGG................................................................................................................................23200.1020200000000
..............................................................................................................................................................................................................................................................GAAAGTGGATGTGTGTAACGT...................................................................................................................21200.1020000002000
............................................................................................................................................................................................GCTCTTTTTATACCCGATAC......................................................................................................................................................................................20120.0810100000000
....................................................................................................................................................................................................................................................GATTTGTGGTGAAAGTGGATGT............................................................................................................................22200.0510100000000
...........................................................................................................................................................................................................................................................GGTGAAAGTGGATGTGTGTAAC.....................................................................................................................22200.0510100000000
........................................................................................................................................................................................................................................................TGTGGTGAAAGTGGATGTGTGTA.......................................................................................................................23200.0510000000100
.........................................................................................................................................................................................................................................................GTGGTGAAAGTGGATGTGTG.........................................................................................................................20200.0510000001000
.........................................................................................................................................................................................................................ATGAGT-ATTGGGGTA------TATTA..................................................................................................................................................20200.0510000001000
..............................................................................................................................................................................................TCTTTTTATACCCGATACTCA----AAA............................................................................................................................................................................24200.0510010000000
...............................................................................................................................................................................................................................................................................................................................................................GCCATGTCTGTCTGTCCGTC-C.................21200.0510000001000
...............................................................................................................................................................................................................................................TATTAGATTTGTGGTGAAAGTGGATG.............................................................................................................................26200.0510000000010
..............................................................................................................................................................................................TCTTTTTATACCCGATACTCA----AAATGA.........................................................................................................................................................................27200.0510000000100
.................................................................................................................................................................................................................CA----AAATGAGT-ATTGGGGTA------TATT...................................................................................................................................................23200.0510100000000
.........................................................................................................................................................................................................................................................GTGGTGAAAGTGGATGTGTGTAACG....................................................................................................................25200.0510100000000
............................................................................................................................................................................................................................................................................................................................................................TGAGCCATGTCTGTCTGTCCGTC-C.................24200.0510000001000
................................................................................................................................................................................................................................................................................................................................CTTGATCAGCATCAATAGCCGAGT..............................................24200.0510000001000
..................................................................................................................................................................................................................................................TAGATTTGTGGTGAAAGT..................................................................................................................................18200.0510100000000
.............................................................................................................................................................................................................................................................TGAAAGTGGATGTGTGTAACGTC..................................................................................................................23200.0510000001000
droWil2
CTT-ATGTACAT----GGGTATACACTG--------AAGTA-----------------------------TCTATGTATGTAC----------------------------------AGTG--GT------GGACACGA-----------A-TTTAA---G-----AC--------------------GTTTTTTTTGTACCATACACCCA----TA--GGGT-GAAATGGTA------TATTAAAGTCGCCAA-------AATGTATGTAACAGGCAGAAGGAAGCATCTCCGACCCCACAAAGTAT-----ATATATTCTTGATCAGGATCAACAACCGAGTCGATCTAGCCATGTCCGTCTGTCCGTC-CG----TCCGTCTGTCCGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................................................................................................................................................................................................................TGTAACAGGCAGAAGGAAGCATCT...................................................................................................24200.7515050100
............................................................................................................................................................................................................................................................................................................................................CAACAACCGAGTCGATCTAGCCATG.................................25200.6513013000
.............................................................................................................................................................................................................................................................................TAACAGGCAGAAGGAAGCATCTCCG................................................................................................25200.35707000
.............................................................................................................................................................................................................................................................................................................................................AACAACCGAGTCGATCTAGCCATG.................................24200.20400040
...............................................................................................................................................................................................................................................................................ACAGGCAGAAGGAAGCATCTCC.................................................................................................22200.15300030
................................................................................................................................................................................................................................................................................................................................................................CCATGTCCGTCTGTCCGTC-CG----............21200.15300030
.......................................................................................................................................................................................................................TA--GGGT-GAAATGGTA------TATTAAAGTC.............................................................................................................................................25200.15300300
....................................................................................................................................................................................................................................................................................................................................................................GTCCGTCTGTCCGTC-CG----TCC.........20200.15300300
.......................................................................................................................................................................................................................................................................TGTATGTAACAGGCAGAAGGA..........................................................................................................21200.10200020
............................................................................................................................................................................................................................................................................................................................................................CTAGCCATGTCCGTCTGTCCGT....................22200.10200020
...........................................................................................................................................................................................................................................................................................................................................................TCTAGCCATGTCCGTCTGTCCGTC-CG----............26200.10202000
..................................................................................................................................................................................................................................................TAAAGTCGCCAA-------AATGTATGTAAC.....................................................................................................................24200.10202000
...............................................................................................................................................................................................................................................................................................................................TCTTGATCAGGATCAACAACCG.................................................22200.10202000
............................................................................................................................................................................................................................................................................................................................................CAACAACCGAGTCGATCTAGCCATGTCC..............................28200.05100010
.................................................................................................................................................................................................................CA----TA--GGGT-GAAATGGTA------TATTAAAG...............................................................................................................................................25200.05100100
.......................................................................................................................................................................................................................................TA------TATTAAAGTCGCCAA-------AATG.............................................................................................................................21200.05100010
.......................................................................................................................................................................................................................................................................................................................................................................CGTCTGTCCGTC-CG----TCCGTCT.....21200.05110000
................................................................................................................................................................................................................................................................................................................................................AACCGAGTCGATCTAGCCATGT................................22200.05100001
...........................................................................................................................................................................................................................................................................................................................................................................TGTCCGTC-CG----TCCGTCTGTCCG22200.05101000
..................................................................................................................................................................................................................................................................................................................................................CCGAGTCGATCTAGCCATGTCCGTCT..........................26200.05100010
droVir3
CTT-AATACCAT----TAATAAGCTGGTAATCTATATAT-------------------------------------CAAAAACG---------------------------------CGTA--TGT------------------------A-GCTACTGAGATATTAC---------CCTTT-------TTCCATTAATCCCCTGAATCCATTAAAAATGGGT-ATAAGGTTA------TATTGTATTTGTGCAAAATCCAAATGTATGTAACAGGCAGAAGGAAGCATCTCCGACCCCATAAAGCAT-----ATATATTCTTGATCAGCATCAATAGCCGAGTCGATCTAGCCATGTCCGTCTGTCTGTC-CG----TCCGTATGT---SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................................................................................................................................................................................................................................................................................................................TATATTCTTGATCAGCATCAATAGCCG.................................................27200.95190000000000000000000000000000019000000000000000000000000000000000
.................................................................................................................................................................................................................................................................TCCAAATGTATGTAACAGGCAGAAGG...........................................................................................................26200.255500000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................TTGATCAGCATCAATAGCCGAGTCG............................................25200.255000000000000000000000000000000050000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................TCTTGATCAGCATCAATAGCCGAGTC.............................................26200.255000000000000000000000000000000000050000000000000000000000000000
...................................................................................................................................................................................................................TTAAAAATGGGT-ATAAGGTTA------TAT....................................................................................................................................................24120.253000000000010000000000001010000000000000000000000000000000000000
...................................................................................................................................................................................................................TTAAAAATGGGT-ATAAGGTTA------TATT...................................................................................................................................................25120.172000000000000000000000000001100000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................TTCTTGATCAGCATCAATAGCCGAG...............................................25200.153000000000000000000000000300000000000000000000000000000000000000
...................................................................................................................................................................................................................................AGGTTA------TATTGTATTTGTGCA........................................................................................................................................21100.101000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................TCAGCATCAATAGCCGAGTCGATCTAG......................................27200.102000000000000000000000000000000000020000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGCATCAATAGCCGA................................................27200.102000000000000000000000000002000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................CGAGTCGATCTAGCCATGTCC..............................21200.102000000000000000000000000000000000000000000000000000000000000020
................................................................................................................................................................................................................................................................ATCCAAATGTATGTAACAGGCAGAA.............................................................................................................25200.102002000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................TAAAAATGGGT-ATAAGGTTA------TATTGTA................................................................................................................................................27140.071000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................................TAAAAATGGGT-ATAAGGTTA------TATTGTAT...............................................................................................................................................28140.071000000000000001000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................ATAAGGTTA------TATTGTATTTG............................................................................................................................................20140.071000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................................................................TAAAAATGGGT-ATAAGGTTA------TATTG..................................................................................................................................................25150.071000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................................................................................................TAAAAATGGGT-ATAAGGTTA------TATTGT.................................................................................................................................................26150.071000000000000000000000000000100000000000000000000000000000000000
......................................................................................................................................................................................................................................TTA------TATTGTATTTGTGCA........................................................................................................................................18180.061000000000000000000000000000000100000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................CTTGATCAGCATCAATAGCCGAGTCGA...........................................27200.051000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................TCTTGATCAGCATCAATAGCCGAG...............................................24200.051000000010000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................AAATGTATGTAACAGGCAGAAGGAA.........................................................................................................25200.051000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................TATATTCTTGATCAGCATCAAT......................................................22200.051000000000000000000000000010000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................TCCAAATGTATGTAACAG...................................................................................................................18200.051000000000000000000000000000000000100000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................CTTGATCAGCATCAATAGCCGAGTCG............................................26200.051000001000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................CAGCATCAATAGCCGAGT..............................................18200.051000000000000000001000000000000000000000000000000000000000000000
droMoj3
TTC-ATTCCCTC----TGGCATCTCGGAAATCCCTAT-------------------------TACCATGAAT--GATC--------------------GA------AACTA-------GG-----------------AT-----------G-TGCAT---T-----T----------------TC---CCTTTTTTTATACCCTGAACCCATTTTCAATGGGAAATCAGGGTA------TAATGGTTTTATTGA-------AATGTATGTAACAGGCAGAAGGAGGCGTGGCAGACCCCATAAAGTAT-----ATATATTCTTGATCAGGGCGACGAGCTGAGTTGATTGGGCCCTGTCCGTCTGTCTGTC-CG----TTCGTCCGTCCGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................T-------------------------TACCATGAAT--GATC--------------------GA------AACTA-------GG-----------------AT-----------................................................................................................................................................................................................................................................26153.27493500077
...................................................................TGAAT--GATC--------------------GA------AACTA-------GG-----------------AT-----------G-TGCA..........................................................................................................................................................................................................................................2521.503200010
....................................T-------------------------TACCATGAAT--GATC--------------------GA------AACTA-------GG-----------------AT-----------G-..............................................................................................................................................................................................................................................27151.47222000020
....................................................................GAAT--GATC--------------------GA------AACTA-------GG-----------------AT-----------G-TGCAA---......................................................................................................................................................................................................................................2520.501100000
..................................................................................................GA------AACTA-------GG-----------------AT-----------G-TGCAT---T-----T----------------TC---CCTTTT....................................................................................................................................................................................................2720.501100000
...................................................................TGAAT--GATC--------------------GA------AACTA-------GG-----------------AT-----------G-TGC...........................................................................................................................................................................................................................................2420.501000001
...................................................................TGAAT--GATC--------------------GA------AACTA-------GG-----------------AT-----------G-TG............................................................................................................................................................................................................................................2320.501100000
.......................................................................T--GATC--------------------GA------AACTA-------GG-----------------AT-----------G-TGCAT---T-----T----------------TC---CCC.......................................................................................................................................................................................................2920.501100000
.......................................................................T--GATC--------------------GA------AACTA-------GG-----------------AT-----------G-TGCAT---T-----T----------------...............................................................................................................................................................................................................2420.501100000
...................................................................TGAAT--GATC--------------------GA------AACTA-------GG-----------------AT-----------G-TGCAT---C-----................................................................................................................................................................................................................................2720.501000001
..................................................................................................................................................................................................................................................................................................................................................CTGAGTTGATTGGGCCCTGTCCGTC...........................2540.251100000
..........................................................................................................................................................................................................................TGGGAAATCAGGGTA------TAATGGTTTTAT...........................................................................................................................................27200.153200010
..................................................................................................................................................................................................................................................................................................................................................................CTGTCCGTCTGTCTGTC-CG----TTCGT.......2470.141100000
..............................................................TACCATGAAT--GATC--------------------GA------AACTA-------GG-----------------AT-----------G-..............................................................................................................................................................................................................................................26150.132200000
..............................................................TACCATGAAT--GATC--------------------GA------AACTA-------GG-----------------AT-----------................................................................................................................................................................................................................................................25150.132200000
..........................................................................................................................................................................................................................................................................................................................................................ATTGGGCCCTGTCCGTCTGTC.......................2190.111000010
................................................................................................................................................................................................................................................................................................................................................................CCCTGTCCGTCTGTCTGTC-CG----TT..........23100.101100000
..C-ATTCCCTC----TGGCATCTCGGAAA........................................................................................................................................................................................................................................................................................................................................................................23200.102000020
.................................................................................................................................................................................................................................................................................................................................................................CCTGTCCGTCTGTCTGTC-CG----TT..........22110.091100000
..........................................................................................................................................................................................................................................................................................................................................................................CTGTCTGTC-CG----TTCGTCCGTC..21120.081000010
.................................................................CATGAAT--GATC--------------------GA------AACTA-------GG-----------------AT-----------G-..............................................................................................................................................................................................................................................23150.071100000
................................................................CCATGAAT--GATC--------------------GA------AACTA-------GG-----------------AT-----------................................................................................................................................................................................................................................................23150.071100000
..................................TAT-------------------------TACCATGAAT--GATC--------------------GA------AACTA-------GG-----------------AT-----------................................................................................................................................................................................................................................................28150.071000001
...................................................................TGAAT--GATC--------------------GA------AACTA-------GG-----------------AT-----------................................................................................................................................................................................................................................................20150.071000001
....................................T-------------------------TACCATGAAT--GATC--------------------GA------AACTA-------GG-----------------AT-----------A-..............................................................................................................................................................................................................................................27170.061000010
......................................................................................................................................................................................................................................GTA------TAATGGTTTTATTGA-------AATGT............................................................................................................................23170.061100000
.......................................................................................................................................................................................................................................................................TGTATGTAACAGGCAGAAGGAG.........................................................................................................22200.051000010
..........................................................................................................................................................................................................................TGGGAAATCAGGGTA------TAATGGTTTTA............................................................................................................................................26200.051100000
..............................TCCCTAT-------------------------TACCATGAAT--GATC--------------------GA------AAC.........................................................................................................................................................................................................................................................................................26200.051100000
.....TTCCCTC----TGGCATCTCGGAAATCCCT...................................................................................................................................................................................................................................................................................................................................................................26200.051100000
.................................................................................................................................................................................................................................................ATGGTTTTATTGA-------AATGTATG.........................................................................................................................21200.051100000
....ATTCCCTC----TGGCATCTCGGAAA........................................................................................................................................................................................................................................................................................................................................................................22200.051000010
.........CTC----TGGCATCTCGGAAATCC.....................................................................................................................................................................................................................................................................................................................................................................20200.051100000
...................................AT-------------------------TACCATGAAT--GATC--------------------GA------AACT........................................................................................................................................................................................................................................................................................22200.051100000
...................................................................................................................................................................................................................TTTTCAATGGGAAATCAGGGTA------TAATGGT................................................................................................................................................29200.051100000
.....TTCCCTC----TGGCATCTCGGAAATCCCTAT-------------------------........................................................................................................................................................................................................................................................................................................................................28200.051000010
....................................................................................................................................................................................................................TTTCAATGGGAAATCAGG................................................................................................................................................................18200.051000010
..........................................................................................................................................................................................................................................................................ATGTAACAGGCAGAAGGAGGCGTGGCA.................................................................................................27200.051000010
droGri2
TAA-A---------------------------------------------------------------------------AACG---------------------------------ATTA--CT------TC--------------------------------------GAC--------------TATATTATTATACCCTAAGCCCATTAAAAATGAGTAAAAAGGGTA------TAATGGTTTTGTGCA-------AATGTATGTAACAGGCAGAAGAAAGCATCTCCGACCCCATAAAGTAT-----CTATATTCTTGATCAGAGTCAACAGCCGAGTCGATATAGCCATGTCCCTCCGTCCGTC-CG----TCCGTCCGTCTGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
CTT-CCCTGAAT----CAATTCTCTGGA----------TGG-----------------------------CCGA--------------------------------GATGAGTAGCAGATCTCTT------ACCA--AG-----------AGAAGCT---T-----GC---------CCCAT---GCACGCATTTTTATACCCTT-----G----C---------AGAGGGTA------TTATAATTTTGGTCA-------AAAGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCCATAAAGTAT-----ATATATTCTTGATCAGGATCACCTCCTGAGTCGATATGAGCATGTCCGTCTGTCCGTC-TG----TCCGTCTGTCCGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................................................................................................................................................................................................................................................................................................................................ACCTCCTGAGTCGATATGAGC....................................21201.35270000027
.........................................................................................................................................................................................................................................................................TGTGCAACGCAGTGAAGGAGACAT.....................................................................................................24200.80160000160
.............................................................................................................................................................................................................................................................................CAACGCAGTGAAGGAGACA......................................................................................................19200.459000009
.............................................................................................................GAGTAGCAGATCTCTT------ACCA--AG-----------AGAAGC..........................................................................................................................................................................................................................................2860.332020000
.....................................................................................................................................................................................................................................................................................TGAAGGAGACATCTCCGACCCC...........................................................................................22200.306060000
................................................................................................................................................................................................................................................................................................................................................TCCTGAGTCGATATGAGCATGTCCG.............................25200.306006000
............................................................................................................................T------ACCA--AG-----------AGAAGCT---T-----GC---------CCCAT---GCACG........................................................................................................................................................................................................27200.255041000
......................................TGG-----------------------------CCGA--------------------------------GATGAGTAGCAGATC.............................................................................................................................................................................................................................................................................2250.201010000
.......................................................................................................................TCTCTT------ACCA--AG-----------AGAAGCT---T-----GC---------CCC..................................................................................................................................................................................................................25200.204040000
............................................................................................................................T------ACCA--AG-----------AGAAGCT---T-----GC---------CCCAT---GCA..........................................................................................................................................................................................................25200.204310000
............................................................................................................TGAGTAGCAGATCTCTT------ACCA--AG-----------AGAA............................................................................................................................................................................................................................................2760.171100000
.........................................................................A--------------------------------GATGAGTAGCAGATCTCTT------ACCA--AG-----------A...............................................................................................................................................................................................................................................2760.171010000
................................................................................................................TAGCAGATCTCTT------ACCA--AG-----------AGAAGC..........................................................................................................................................................................................................................................2560.171010000
............................................................................................................................T------ACCA--AG-----------AGAAGCT---T-----GC---------CCCAT---GCAC.........................................................................................................................................................................................................26200.153300000
............................................................................................................................T------ACCA--AG-----------AGAAGCT---T-----GC---------CCC..................................................................................................................................................................................................................20200.153120000
...................................................................................................................................ACCA--AG-----------AGAAGCT---T-----GC---------CCCAT---GCA..........................................................................................................................................................................................................24200.153300000
........................................................................................................................CTCTT------ACCA--AG-----------AGAAGCT---T-----GC---------CC...................................................................................................................................................................................................................23200.153030000
.................................................................................................................................................................................................................................................................................................................................................CCTGAGTCGATATGAGCATGTCCGTCT..........................27200.153030000
................................................................................................................................................................................................................................................................................CGCAGTGAAGGAGACATCTCCGA...............................................................................................23200.153300000
............................................................................................................................T------ACCA--AG-----------AGAAGCT---T-----GC---------CCCAT---GCACGCA......................................................................................................................................................................................................29200.153300000
..........................................................................................................................................................................................................................................................GTCA-------AAAGTGTGCAACGCAGT................................................................................................................21200.102020000
..........................................................................................................................CTT------ACCA--AG-----------AGAAGCT---T-----GC---------CCCAT---GC...........................................................................................................................................................................................................26200.102200000
.....................................................................................................................................CA--AG-----------AGAAGCT---T-----GC---------CCCAT---GCACG........................................................................................................................................................................................................24200.102110000
.........................................................................................................................TCTT------ACCA--AG-----------AGAAGCT---T-----GC---------CCCAT---GC...........................................................................................................................................................................................................27200.102011000
...................................................................................................................................................................................................................................................................................................................T-----ATATATTCTTGATCAGGATCACCT.....................................................25200.102020000
.....................................................................................................................GATCTCTT------ACCA--AG-----------AGAAGCT---T-----GC---------CCC..................................................................................................................................................................................................................27200.102020000
........................................................................................................................CTCTT------ACCA--AG-----------AGAAGCT---T-----GC---------CCCAT---G............................................................................................................................................................................................................27200.051010000
............................................................................................................................T------ACCA--AG-----------AGAAGCT---T-----GC---------CCCA.................................................................................................................................................................................................................21200.051010000
....................................................................................................................................CCA--AG-----------AGAAGCT---T-----GC---------CCCAT---GCACG........................................................................................................................................................................................................25200.051100000
................................................................................................................................................................................................................................................................................................................................................................GCATGTCCGTCTGTCCGTC-TG----TCC.........24200.051010000
...........................................................................................................................TT------ACCA--AG-----------AGAAGCT---T-----GC---------CCCAT---GCACG........................................................................................................................................................................................................28200.051001000
..........................................................................................................................CTT------ACCA--AG-----------AGAAGCT---T-----GC---------CCCAC---.............................................................................................................................................................................................................24200.051010000
.......................................................................................................................................................................................................................................................................................................................................AGGATCACCTCCTGAGTCGATA.........................................22200.051010000
....................................................................................................................................CCA--AG-----------AGAAGCT---T-----GC---------CCCAT---GCACGC.......................................................................................................................................................................................................26200.051100000
............................................................................................................................T------ACCA--AG-----------AGAAGCT---T-----GC---------CCCAT---GCACGT.......................................................................................................................................................................................................28200.051010000
.........................................................................................................................TCTT------ACCA--AG-----------AGAAGCT---T-----GC---------CCC..................................................................................................................................................................................................................23200.051010000
..................................................................................................................................................................................................................G----C---------AGAGGGTA------TTATAATTTTGGTC.........................................................................................................................................24200.051001000
.........................................................................................................................TCTT------ACCA--AG-----------AGAAGCT---T-----G...............................................................................................................................................................................................................................19200.051100000
...........................................................................................................................TT------ACCA--AG-----------AGAAGCT---T-----GC---------CCCAT---GCA..........................................................................................................................................................................................................26200.051100000
.......................................................................................................................TCTCTT------ACCA--AG-----------AGAAGCT---T-----GC---------CC...................................................................................................................................................................................................................24200.051010000
..........................................................................................................................CTT------ACCA--AG-----------AGAAGCT---T-----GC---------CCCAT---G............................................................................................................................................................................................................25200.051001000
.............................................................................................................................................................................................................................................................A-------AAAGTGTGCAACGCAGTGA..............................................................................................................20200.051010000
.....................................................................................................................................CA--AG-----------AGAAGCT---T-----GC---------CCCAT---GCACGC.......................................................................................................................................................................................................25200.051100000
...............................................................................................................................................................................................................................................................................ACGCAGTGAAGGAGACATCTCCGACCCC...........................................................................................28200.051010000
...........................................................................................................................TT------ACCA--AG-----------AGAAGCT---T-----GC---------CCCAT---GCAC.........................................................................................................................................................................................................27200.051010000
.................................................................................................................................................................................................................................................................................................................................................................CATGTCCGTCTGTCCGTC-TG----TCCGT.......25200.051010000
..............................................................................................................................................................................................................................................................................................CATCTCCGACCCCATAAAGT....................................................................................20200.051010000
...................................................................................................................................ACCA--AG-----------AGAAGCT---T-----GC---------CCCAT---GCACG........................................................................................................................................................................................................26200.051100000
............................................................................................................................................................................................................................................................................GCAACGCAGTGAAGGAGACA......................................................................................................20200.051000010
.........................................................................................................................TCTT------ACCA--AG-----------AGAAGCT---T-----GC---------CCCAT---G............................................................................................................................................................................................................26200.051100000
................................................................................................................................................................................................................................................................................CGCAGTGAAGGAGACATCTCCGACCC............................................................................................26200.051000001
.................................................................................................................................................................................................................................................................................................................................TTGATCAGGATCACCTCC...................................................18200.051100000
.........................................................................................................................TCTT------ACCA--AG-----------AGAAGCT---T-----GC---------CC...................................................................................................................................................................................................................22200.051100000
droBip1
GAT-A----------------ATCAGGATGTACCTAT-------------------------------------CATAGGGATT---------------------------------TGT------------------------------A-TATACTGCTGTATAGCCTTT-----ACTT-------CGAGTTTTTATACCGGGTACTCG----T--------ACAAGGGTA------TATTGTAGTCGTGTT-------AATGTATGTAACATAGAGAAGGAATAATCTCCGACCCCAAAAAGTATTTA-TGTATATTCTTGATCAGCATCAACAGCCGAGTTGATATAGCCACGTCCGTCTGCCCGAC-CG----TTCGTCTGTCCGSizeHit CountTotal NormTotal
No Reads
droKik1
ATT-GGT-------------ATTTAGGA----------CT------------------------------------CCAAAATG---------------------------------CG------------GCAGATAATATGTCAGTGTT---------------GC---TAC--------------TTCATTTTTATACCCTT-----G---------------CAGGGTA------TTATAATTTCAGTCA-------GAAGTTTGCAACGCAGTGAAGGAGACGTTTCCGACCCTATAAAGTAT-----ATATATTCTTGATCAGCATCAACAGCCGAGTCGATCTAGCCATGTCCGTCTGTCCGTC-TG----TCCGTCTGTCCASizeHit CountTotal NormTotal
No Reads
droFic1
TTT-ATTGGTGAGCAATTAAACTCTAGA----------TATACATACGT------GT-----ATGTACAAAT--TGTA--------------------GA-------------------------------------AA-----------G-TAAAT---T-----AT---------ACATA---TA-TGTATATTTATACCC-----TTG----CA--GAGC-AAAAGAGTA------TTATAATTTCAGTCA-------AAAGTTTGCAACGCAATGAAGGAGACACCTTGGACCCCATAAAGTAT-----ATATATTCTTGATCAGCATCACGATCAGAATCGAAATACGTCTGTACGTCTGTACGTC-TG----TCCGTCTGTCCGSizeHit CountTotal NormTotal
No Reads
droEle1
CCT-ATAGCTGC-------CATTTTCTG--------TCATA-----------------------------CTGACCAT---ACG--------------------------GAC----AGTA--TA------AAAAATAA-----------A-TTCTT---G-----AC---------ACCTT---ACAAATCCTTTTGTACCCGTTACTCG----TC--GAGT-AAATACCTATGTATATATTGTATTCGTTGA-------AAAGTATGTTACAGGCAGAAGCGTGCGTTTCCGACCATATAGAGTAT-----ATATATTTTTGATAAGGATCAATAGCCGGGTCGATCTAGCTAGGTCCGTCTGTCCGTC-CG----TCTGTCTGTCCGSizeHit CountTotal NormTotal
No Reads
droRho1
CTC-CATGTCAA-----------------------------------------------------CATGGAT--TTAT--------------------AAGGCGAAGATCTACGACGCGTC--CC------ACAAGGAA-----------G---------------CC---------ACCTTGGC---CCACTTTTTATACCCGTTACTCG----TA--GAGT-AAAAGGGTA------TATTGTATTCGTGCA-------AAAGTATGTAACAGCTAGAAGGAAGCGTTTCCGACCCTATAAAGTAT-----ATATATTCTTGATCAGGGTCACTAGCCGAGTCGATATAGCCATGTCCGTCTGTCCGTC-TG----TCTGTCTGTCCGSizeHit CountTotal NormTotal
No Reads
droBia1
TTT-ATCAAAAT----CGG--------A----------CGA--------TTATGTCAAATAG--------CTGCCATAGGAACGATCTGAAAATTAGTGA------------ACAAAAATA---------------------------------------------TT---------TCTTT------GGTGTTTTTATACCCGTTACTCG----TA--GAGT-GAAAGGTTA------T-CTAGATTCGTTGG-------ATAGTATTTTATAGGTA-AAGGAAGCGTTTCTGACCCCATAAAGTAT-----ATATATTCTTGATCAGGATCACTAGCAGAGTCGTTCTAGCCATACCCGCCTGTCCGTC-CG----TCCGTATG----SizeHit CountTotal NormTotal
No Reads
droTak1
CTG-GTTATCAA----TAGTTCTCCTGC----------TTA-----------------------------ATGACTTTGAAATT-----------ATGGA------------TGACAAATT-----------------------------T-TTTAC---T-----AA---------CCCTC---TG-ACCGTTTTTATACCCGTTACTCG----TA--GAGT-AAAAGGGTA------TACTAGATTCGTGCA-------AATGTATGTAACAGCTAGAAGGAAGCGTTTCCGACCCCATAAAGTAT-----ATATATTCTTGATCAGGGTCACTAGCCGAGTCGATCTAGCCATGTCCGTCTGTCCGTC-TG----TCCGTCTGTCTGSizeHit CountTotal NormTotal
No Reads
droEug1
ACA-ATTGGTGG-------CGCTTTGGGAA--------TTT-----------------------------CCACTAGCAAAATA---------------------------------AATA--TT------CTAAA------------ATT---------------GT---GACTATAGCGT-TT---CCTCTTGTTATACCCGTTACTCG----TA--GAGT-AAAAGGGTA------TACTAGATTTGTTGA-------AAAGTATGTAACAGATAGAAGGAAGCGTTTCCGACTCTATAAAGTAT-----ATATACTCTTGATCAGGGTCAATAGCGAAGTCGATTGAGCCATGTCCGTCTGTCCGTT-CA----TCCGTATG----SizeHit CountTotal NormTotal
No Reads
dm3
ATT-ACA---AT----TTCTATAT-------------------------------CAATTTA--------CCGGTTCAGCAACG---------------------------------GGGA--TT------CAA----------------A-TCTGA---C-----T------------TGT-TA---TCCATTTTTATACCCGTTACTCG----AA--GAGT-AAAAGGGTA------CCCTAAATTTGTTGA-------AAAGTATGTAGCAGTCAGAAGAAGGCGTTTCCGACCATGTACAGTAT-----ATATATTCTTGATCAG-----------GAGTCGATCTAGTCATGTCCGTCTGTCCGCCATG----TCCGT-------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................TCGATCTAGTCATGTCCGT............................1951.4070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................TTGA-------AAAGTATGTAGCAGTCAGAAGAA..........................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................AGAAGAAGGCGTTTCCGACCA............................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................GAAGAAGGCGTTTCCGACCA............................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................GTCGATCTAGTCATGTCCGTCTGTC.......................2551.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000110000000000000000000000000
............................................................................................................................................................................................................................................................................................................TACAGTAT-----ATATATTCTTGATCAG-----------GA................................................2621.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................TTGA-------AAAGTATGTAGCAGTCAGAA.............................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................A--------CCGGTTCAGCAACG---------------------------------GGGA--...........................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................ACCCGTTACTCG----AA--GAGT-AAAA..................................................................................................................................................................2230.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................TCTAGTCATGTCCGTCTGTCC......................2150.6030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
........................................................................................................................................................................................................................................................................................................................................................CGATCTAGTCATGTCCGTCTG.........................2150.6030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000
.......................................................................................................................................................................................................................................................TTGTTGA-------AAAGTATGTAGC.....................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................................TTGTTGA-------AAAGTATGTAGCA....................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................ATTTGTTGA-------AAAGTATGTAGCA....................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................GTCGATCTAGTCATGTCCGTC...........................2150.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................TCGATCTAGTCATGTCCGTCTGTCC......................2550.4020000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................GTCGATCTAGTCATGTCCGTCTGT........................2450.4020000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................GATCTAGTCATGTCCGTCTG.........................2050.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................GTCGATCTAGTCATGTCC..............................1850.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................ATCTAGTCATGTCCGTCTGTC.......................2150.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................AGTCGATCTAGTCATGTCCGT............................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................TATATTCTTGATCAG-----------GAG...............................................1840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................AGTCGATCTAGTCATGTCCGTCTGTCC......................2740.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TTTATACCCGTTACTCG----AA--GAG........................................................................................................................................................................2240.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................GTCGATCTAGTCATGTCCGT............................2050.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................GTCGATCTAGTCATGTCCGTCTGTCCG.....................2750.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................TCGATCTAGTCATGTCCGTCTGTCCG.....................2650.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................TAT-----ATATATTCTTGATCAG-----------G.................................................20200.2040000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000001000000000000010000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................TCGATCTAGTCATGTCCGTCT..........................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
....................................................................................................................................................................................................TATACCCGTTACTCG----AA--GAGT-......................................................................................................................................................................2170.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TATACCCGTTACTCG----AA--GAG........................................................................................................................................................................2070.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................CATTTTTATACCCGTTACTCG----...............................................................................................................................................................................2180.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................TTTGTTGA-------AAAGTATGT........................................................................................................................17200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................GTAT-----ATATATTCTTGATCAG-----------..................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................AGTAT-----ATATATTCTTGATCAG-----------G.................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................TAT-----ATATATTCTTGATCAG-----------GA................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................ATATATTCTTGATCAG-----------GA................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GAA-ATAATAAT-----------------------------------------------------------------------G---------------------------------GGTA--TTTAATAGCCGAGTCA-----------C-TCCAT---T-----TT---------AGCTT-TT---TATCTTTGTATACCCGTTACTCG----TA--GAGT-AAAAGGGTA------TACTAGATTCGTTGA-------AAAATGTGTAACAGGCAGAAGGATGCGTTTCCGACCATATAAAGTATGTA-CATATATTCTTGATCAGGATCAATAGCCGAGTCGATCTGGCCATGTCCGTCTGTCCGGA-TG----TCCGTATG----SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............................................................................................................................................................................................................TACTCG----TA--GAGT-AAAAGGGTA------.......................................................................................................................................................21207.351470000147000000000000
..............................................................................................................................................................................................................................T-AAAAGGGTA------TACTAGATTCGTTGA-------AA...............................................................................................................................27203.7074000000740000000000
.....................................................................................................................................................................................................................................................................................................................................TCAGGATCAATAGCCGAGTCGATC.........................................24202.2044000000000044000000
.......................................................................................................................................................................................................................TA--GAGT-AAAAGGGTA------TACTAGATTCGT...........................................................................................................................................27201.4529000000000029000000
.........................................................................................................................................................................................................................................................................TGTGTAACAGGCAGAAGGATGCGT.....................................................................................................2411.00100000000001000000
...................................................................................................................................................................................................................................................................................................................................................CGAGTCGATCTGGCCATGTCCGTCT..........................25200.7515000000000015000000
...............................................................................................................................................................................................................................................................................................................................TCTTGATCAGGATCAATAGC...................................................20200.5511000000000011000000
...............................................................................................................................................................................................................................................................................................................................TCTTGATCAGGATCAATAGCCGAGTC.............................................26200.501001000000009000000
............................................................................................................................................................................................................................AGT-AAAAGGGTA------TACTAGATTCGTTGA-------A................................................................................................................................28200.45900000009000000000
.............................................................................................................................................................................................................................................................................TAACAGGCAGAAGGATGCGT.....................................................................................................2050.40200000000002000000
....................................................................................................................................................................................................................................GGGTA------TACTAGATTCGTTGA-------AAAA.............................................................................................................................2450.40200000002000000000
.......................................................................................................................................................................................................................TA--GAGT-AAAAGGGTA------.......................................................................................................................................................15200.35700000000007000000
.................................................................................................................................................................................................................................................................................................................................TTGATCAGGATCAATAGCCGAGTCGATC.........................................28200.35700000000007000000
...........................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGGATCAATAGCC..................................................25200.30600010000104000000
........................................................................................................................................................................................................................................A------TACTAGATTCGTTGA-------AAAA.............................................................................................................................2070.29200000000000002000
.....................................................................................................................................................................................................................................................................................................................................TCAGGATCAATAGCCGAGTCGATCTGGC.....................................28200.25500000002003000000
.................................................................................................................................................................................................................................................................................................................................................GCCGAGTCGATCTGGCCATGTCCGTC...........................26200.20400000002002000000
.................................................................................................................................................................................................................................................................................AGGCAGAAGGATGCGTT....................................................................................................1750.20100000000001000000
................................................................................................................................................................................................................................AAAAGGGTA------TACTAGATTCGTTGA-------AA...............................................................................................................................26200.20400000004000000000
..............................................................................................................................................................................................................................................................................AACAGGCAGAAGGATGCGT.....................................................................................................1950.20100000000001000000
..................................................................................................................................................................................................................................................................................GGCAGAAGGATGCGTT....................................................................................................1660.17100000000001000000
................................................................................................................................................................................................................................................................................CAGGCAGAAGGATGCG......................................................................................................1660.17100000000001000000
................................................................................................................................................................................................TTTGTATACCCGTTACTCG----TA--GAGT-A.....................................................................................................................................................................2660.17100000010000000000
............................................................................................................................................................................................................................................................................GTAACAGGCAGAAGGATG........................................................................................................1860.17110000000000000000
...............................................................................................................................................................................................................................................................................ACAGGCAGAAGGATG........................................................................................................1560.17100000000001000000
...............................................................................................................................................................................................................................................................................................................................................TAGCCGAGTCGATCTGGCCATGTC...............................24200.15300000000003000000
...................................................................................................................................................................................................................................................................................................................................................CGAGTCGATCTGGCCATGTCCGTCTG.........................26200.15300000000003000000
...................................................................................................................................................................................................................................................................................................................................................CGAGTCGATCTGGCC....................................15200.15300000000003000000
..................................................................................................................................................................................................................................................................................GGCAGAAGGATGCGT.....................................................................................................1570.14100000000001000000
...............................................................................................................................................................................................................................................TACTAGATTCGTTGA-------AAAA.............................................................................................................................1970.14100000000100000000
......................................................................................................................................................................................................................................GTA------TACTAGATTCGTTGA-------AAAA.............................................................................................................................2270.14100000000010000000
......................................................................................................................................................................................................................................................................................GAAGGATGCGTTTCCGAC..............................................................................................1880.13100000000001000000
.................................................................................................................................................................................................................................................................................................................................TTGATCAGGATCAATAGCCGAGTCGAT..........................................27200.10200000000002000000
......................................................................................................................................................................................................................................................................................................................................CAGGATCAATAGCCGAGTCGATC.........................................23200.10200000002000000000
...................................................................................................................................................................................................GTATACCCGTTACTCG----TA--GAG........................................................................................................................................................................21100.10100000000000010000
.............................................................................................................................................................................................................TACTCG----TA--GAGT-AAAAGGGTA------TACTAGA................................................................................................................................................28200.10200000000000020000
..............................................................................................................................................................................................................................................................................................................................TTCTTGATCAGGATCAA.......................................................17200.10200000000002000000
...................................................................................................................................................................................................................................................................................................................................................CGAGTCGATCTGGCCATGTC...............................20200.10200000000002000000
............................................................................................................................................................................................................................................................................................................................................CAATAGCCGAGTCGATCTGGCCATGTC...............................27200.10200000000002000000
...................................................................................................................................................................................................................................................................................................................................................CGAGTCGATCTGGCCATGTCCGTC...........................24200.10200000000000200000
.....................................................................................................................................................................................................................................................................................................................................TCAGGATCAATAGCCGAGTCGAT..........................................23200.10200000020000000000
............................................................................................................................................................................................................................................................................................................................TATTCTTGATCAGGATCAATAGCCGA................................................26200.10200000020000000000
.....................................................................................................................................................................................................................................................................................................................TA-CATATATTCTTGATCAGGATCAAT......................................................26140.07100000000010000000
..................................................................................................................................................................................................TGTATACCCGTTACT.....................................................................................................................................................................................15180.06100000000001000000
...................................................................................................................................................................................................................................................................................................................................GATCAGGATCAATAGCCGAGTCGAT..........................................25200.05100000000001000000
......................................................................................................................................................................................................................................................................................................................................................GTCGATCTGGCCATGTCCGT............................20200.05100000000001000000
...............................................................................................................................................................................................................................................................................................................................................TAGCCGAGTCGATCTGGCCATGTCCGT............................27200.05100000010000000000
......................................................................................................................................................................................................................................................................................................................................CAGGATCAATAGCCGAGTCGATCTGGC.....................................27200.05101000000000000000
..................................................................................................................................................................................................................................................................................................................................................CCGAGTCGATCTGGCCATGTCCGTC...........................25200.05100000001000000000
...............................................................................................................................................................................................................................................................................................................................................TAGCCGAGTCGATCTGGCCATGTCCGTCTG.........................30200.05100000001000000000
.....................................................................................................................................................................................................................................................................................................................................................AGTCGATCTGGCCATGTCCGT............................21200.05100000000001000000
......................................................................................................................................................................................................................................................................................................................................CAGGATCAATAGCCGAGTCGATCTC.......................................25200.05100000010000000000
................................................................................................................................................................................................................TCG----TA--GAGT-AAAAGGGTA------TACTA..................................................................................................................................................23200.05100000010000000000
.......................................................................................................................................................................................................................................................................................................................................AGGATCAATAGCCGAGTCGATCTGG......................................25200.05100000000010000000
..............................................................................................................................................................................................................................................................................................................................TTCTTGATCAGGATC.........................................................15200.05100000000010000000
......................................................................................................................................................................................................................................................................................................................................CAGGATCAATAGCCGAGTCGATCTG.......................................25200.05100000001000000000
..................................................................................................................................................................................................................................................................................................................................................CCGAGTCGATCTGGCCATGTC...............................21200.05100000000001000000
...................................................................................................................................................................................................................................................................................................................................................CGAGTCGATCTGGCCATGTCCGTCTGT........................27200.05100000000001000000
................................................................................................................................................................................................................................................................................................................................................AGCCGAGTCGATCTGGCCAT..................................20200.05100000000001000000
...............................................................................................................................................................................................................................................................................................................................TCTTGATCAGGATCAATAGCCGAGTCGAT..........................................29200.05100000010000000000
...........................................................................................................................................................................................................................................................................................................................................TCAATAGCCGAGTCGATCTG.......................................20200.05100000000001000000
.............................................................................................................................................................................................................................GT-AAAAGGGTA------TACTAGATTCGTTGA-------A................................................................................................................................27200.05100000000000010000
................................................................................................................................................................................................................................................................................................................................................AGCCGAGTCGATCTGG......................................16200.05100000010000000000
......................................................................................................................................................................................................................................................................................................................................................GTCGATCTGGCCATGTCCGTC...........................21200.05100000000001000000
............................................................................................................................................................................................................................................................................................................................................CAATAGCCGAGTCGATCTGG......................................20200.05100000000000100000
................................................................................................................................................................................................................................................................................................................................CTTGATCAGGATCAATAGCCGAGTCGA...........................................27200.05100000010000000000
.............................................................................................................................................................................................................................................................................................................................................AATAGCCGAGTCGATCTGGCCATGTCC..............................27200.05100000000001000000
droSec2
AAC--------------------------------------------------------------------------------G---------------------------------GGTA--TCTTTTAGGCAGGTAA-----------G-TCGAC---T-----AT---------AGCGT-TC---TCTCTTGTTAAACCTGTTAGTCG----CA--GAGT-AAAAGGATT------TACTAGATTCGCTGA-------AAAGTATGTAACAGGCAGAGGGAAGCGTTTCCGACTATATAAAGTA---------TATTCTTGATCAGAAATAATAGCCGAGTCGATCTGGCCATGTCAGTCTGCCCGTC-CG----TCCGTATTTACGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................................................................................................................................................TCGAC---T-----AT---------AGCGT-TC---TCTCTTG...................................................................................................................................................................................................22150.1320101
......................................................................................................................................................................................................................................................TTCGCTGA-------AAAGTATGTAACAGG..................................................................................................................2390.1111000
........................................................................................................................................................TCGAC---T-----AT---------AGCGT-TC---TCTCTTGT..................................................................................................................................................................................................23150.0710001
.........................................................................................................................................................CGAC---T-----AT---------AGCGT-TC---TCTCTTGT..................................................................................................................................................................................................22160.0610001
..........................................................................................................................................................GAC---T-----AT---------AGCGT-TC---TCTCTTGT..................................................................................................................................................................................................21170.0610001
...........................................................................................................................................................................................................................................................................................AAGCGTTTCCGACTATATAAAGT....................................................................................23200.0511000
...........................................................................................................................................................................................................................................................................................AAGCGTTTCCGACTATATAAA......................................................................................21200.0511000
droYak3
TTT-GTTAAAAT----TATTTTTTAGGA----------CAA-----------------------------TT--TATAGGAGAG---------------A------AATTATTAG--GGGA--TT------------------------------AT---T-----AA----------TTTG---TA-GATATTTTTATACCCGTTACTCG----TA--GAGT-AAAAGGGTA------TACTAGATTCGTTGA-------AAAGTATGTAACAGGCAGAAGGAAGCGTTTCCGACCATATAAAGTAT-----ATATATTCTTGATCAGGATCAATAGCCGAGTCGATTTGGCCATGTCCGTCTGTCCGTC-CGTCTGTCCGTCTGTCCGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................................................................................................................................................................................................................................................................................TTGGCCATGTCCGTCTGTCCGTC-C.................24200.7515015000000000
.............................................................................................................................................................................................................................................................................................................................................................TGGCCATGTCCGTCTGTCCGTC-CGTCT.............27200.7014014000000000
...............................................................................................................................................................................................................................................................................................................................................................GCCATGTCCGTCTGTCCGTC-C.................21200.15303000000000
............................................................................................................................................................................................................................................................................................................................................................TTGGCCATGTCCGTCTGTCCGTC-CGTC..............27200.10200020000000
......................................................................................................................................................................................................................................................................................................................................................GTCGATTTGGCCATGTCCGTCTGT........................24200.10200000020000
..........................................................................................................................................................................................................................................................................................................................................................ATTTGGCCATGTCCGTCTGTCC......................22200.10200200000000
.......................................................................................................................................................................................................................................................TCGTTGA-------AAAGTATGTAACAGGC.................................................................................................................23200.10202000000000
.........................................................................................................................................................................................................................................................................................................................................................................TCTGTCCGTC-CGTCTGTCCGTCTGTC..26200.10202000000000
................................................................................................................................................................................................................................AAAAGGGTA------TACTAGATTC.............................................................................................................................................19200.10200200000000
...........................................................................................................................................................................................................................................................................................................................................................TTTGGCCATGTCCGTCTGTCCGTC-CG................26200.05100100000000
...............................................................................................................................................................................................................CTCG----TA--GAGT-AAAAGGGTA------TACTAGATT..............................................................................................................................................28200.05101000000000
.......................................................................................................................................................................................................................................................................................................................................................................CGTCTGTCCGTC-CGTCTGTCCGTC......24200.05100100000000
...................................................................................................................................................................................................................................................................................GCAGAAGGAAGCGTTTCCGA...............................................................................................20200.05101000000000
.....................................................................................................................................................................................................................................................................................................................................TCAGGATCAATAGCCGAGTCGATTTGGC.....................................28200.05101000000000
.........................................................................................................................................................................................................................................................................................................................ATATATTCTTGATCAGGATCAATAGCCGA................................................29200.05100000010000
................................................................................................................................................................................................................................................................................................................GTAT-----ATATATTCTTGATCAGGATCAATA.....................................................28200.05100000010000
.................................................................................................................................................................................................................................................................................AGGCAGAAGGAAGCGTTTCC.................................................................................................20200.05100000010000
.................................................................................................................................................................................................................................................................................................TTCCGACCATATAAAGTAT-----ATATATTCT....................................................................28200.05101000000000
...........................................................................................................................................................................................................................................................................................................................................................................TGTCCGTC-CGTCTGTCCGTCTGTCC.25200.05100010000000
.................................................................................................................................................................................................................CG----TA--GAGT-AAAAGGGTA------TACTAGATTC.............................................................................................................................................27200.05101000000000
.........................................................................................................................................................................................................................................................................................................................................................GATTTGGCCATGTCCGTCTG.........................20200.05101000000000
..................................................................................................................................................................................................................................................................................................................AT-----ATATATTCTTGATCAGGA...........................................................20200.05100000010000
........................................................................................................................................................................................................................................................................GTATGTAACAGGCAGAAGGAAGCGT.....................................................................................................25200.05100000010000
.............................................................................................................................................................................................ATATTTTTATACCCGTTACT.....................................................................................................................................................................................20200.05101000000000
....................................................................................................................................................................................................................................................................................................................................................GAGTCGATTTGGCCATGTCCGTCTGTC.......................27200.05100100000000
droEre2
AGGAATTATAAT----TATTATTG-------------------------------CAA-------------------------G---------------------------------GGTA--TA-----------------------------------------AT---------TCTGC---AG-GGTATTGGTATACCCGTTACTCT----TA--GGGT-AAAATGGTA------TAATAGATTCGTTGA-------AAAGTATGTAACAG-CAGAGGGAAGCGTTTCCGACCATATAAAGTATATAATATATATTATTGATCAGGATCAATGGCCGAGTCGAATTGGCCATGTCCGTTTGCCTGTC-CG----TTCATTTGTCCGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........................................................................................................................................................................................................................................A------TAATAGATTCGTTGA-------AAAGT............................................................................................................................21200.0510000010

Generated: 06/08/2015 at 04:12 PM